1
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Padula D. Discriminating Clockwise and Counterclockwise Photoisomerization Paths in Achiral Photoswitches by Excited-State Electronic Circular Dichroism. J Phys Chem B 2024. [PMID: 39171863 DOI: 10.1021/acs.jpcb.4c02384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/23/2024]
Abstract
Despite the numerous investigations of photoisomerization reactions from both the computational and experimental points of view, even in complex environments, to date there is no direct demonstration of the direction of rotation of the retinal chromophore, initiating the vision process in several organisms, occurring upon light irradiation. In the literature, many proposals have been formulated to shed light on the details of this process, most of which are extracted from semiclassical simulations. Although high hopes are held in the development of time-resolved X-ray spectroscopy, I argue in this work that simpler but less known techniques can be used to unravel the details of this fascinating photochemical process. In fact, chiroptical spectroscopy would unambiguously prove the direction of the rotatory motion of the chromophore during the photoisomerization process by probing excited state chirality, a piece of information that, so far, has been exclusively extracted from atomistic simulations. I demonstrate this statement by computing the expected chiroptical response along photoisomerization pathways for several models of the retinal chromophores that are found in nature bound to rhodopsins, including nuclear ensemble spectra from semiclassical dynamics simulations, that can be compared with time-resolved experiments.
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Affiliation(s)
- Daniele Padula
- Dipartimento di Biotecnologie, Chimica e Farmacia, Università di Siena, Via A. Moro 2, Siena 53100, Italy
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2
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Orlova AP, Bernbeck MG, Rinehart JD. Designing Quantum Spaces of Higher Dimensionality from a Tetranuclear Erbium-Based Single-Molecule Magnet. J Am Chem Soc 2024; 146:23417-23425. [PMID: 39106366 DOI: 10.1021/jacs.4c06600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/09/2024]
Abstract
The spin relaxation of an Er3+ tetranuclear single-molecule magnet, [Er(hdcCOT)I]4, (hdcCOT = hexahydrodicyclopentacyclooctatetraenide dianion), is modeled as a near-tetrahedral arrangement of Ising-type spins. Combining evidence from single-crystal X-ray diffraction, magnetometry, and computational techniques, the slow spin relaxation is interpreted as a consequence of symmetry restrictions imposed on quantum tunneling within the cluster core. The union of spin and spatial symmetries describe a ground state spin-spin coupled manifold wherein 16 eigenvectors generate the 3D quantum spin-space described by the vertices of a rhombic dodecahedron. Analysis of the experimental findings in this context reveals a correlation between the magnetic transitions and edges connecting cubic and octahedral subsets of the eigenspace convex hull. Additionally, the model is shown to map to a theoretically proposed quantum Cayley network, indicating an underexplored synergy between mathematical descriptions of molecular spin interactions and quantum computing configuration spaces.
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Affiliation(s)
- Angelica P Orlova
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Maximilian G Bernbeck
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Jeffrey D Rinehart
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
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3
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Song M, Alavi A, Li Manni G. Permutation symmetry in spin-adapted many-body wave functions. Faraday Discuss 2024. [PMID: 39158096 DOI: 10.1039/d4fd00061g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/20/2024]
Abstract
In the domain of exchange-coupled polynuclear transition-metal (PNTM) clusters, local emergent symmetries exist which can be exploited to greatly increase the sparsity of the configuration interaction (CI) eigensolutions of such systems. Sparsity of the CI secular problem is revealed by exploring the site permutation space within spin-adapted many-body bases, and highly compressed wave functions may arise by finding optimal site orderings. However, the factorial cost of searching through the permutation space remains a bottleneck for clusters with a large number of metal centers. In this work, we explore ways to reduce the factorial scaling, by combining permutation and point group symmetry arguments, and using commutation relations between cumulative partial spin and the Hamiltonian operators, . Certain site orderings lead to commuting operators, from which more sparse wave functions arise. Two graphical strategies will be discussed, one to rapidly evaluate the commutators of interest, and one in the form of a tree search algorithm to predict how many and which distinct site permutations are to be analyzed, eliminating redundancies in the permutation space. Particularly interesting is the case of the singlet spin states for which an additional reversal symmetry can be utilized to further reduce the number of distinct site permutations.
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Affiliation(s)
- Maru Song
- Electronic Structure Theory Department, Max Planck Institute for Solid State Research, Heisenbergstraße 1, 70569 Stuttgart, Germany.
| | - Ali Alavi
- Electronic Structure Theory Department, Max Planck Institute for Solid State Research, Heisenbergstraße 1, 70569 Stuttgart, Germany.
- Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
| | - Giovanni Li Manni
- Electronic Structure Theory Department, Max Planck Institute for Solid State Research, Heisenbergstraße 1, 70569 Stuttgart, Germany.
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4
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Santria A, Ishikawa N. Identification of a Weak Interaction between the Spin-Only 4f-Electronic System of Trivalent Gd Ion and a Photoexcited Cyclic π Electronic System. J Phys Chem A 2024; 128:6722-6728. [PMID: 39106396 DOI: 10.1021/acs.jpca.4c04593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/09/2024]
Abstract
An electronic interaction between the spin-only 4f-electronic system and the photoexcited π cyclic system has been identified in the anionic bis(phthalocyaninato)gadolinium(III) complex [Pc2Gd]- by using variable-temperature variable-magnetic-field magnetic circular dichroism (VTVH MCD). Two positive MCD A-term patterns, corresponding to the QH and QL absorption bands, were observed to increase in intensity as the temperature decreased, indicating a ferromagnetic-type interaction between spin angular momentum S of the 4f system and orbital angular momentum L of the photoexcited π system. A theoretical model incorporating the S-L interaction constant CSL was fitted to the VTVH MCD spectra, confirming the presence of a weak interaction, whose intensity was determined as CSL = 0.27 cm-1 for QL and CSL = 0.02 cm-1 for QH. Ab initio calculations using the RASSCF and RASSI methods revealed that the inclusion of the excited state calculations with the spin multiplicity (2S + 1) of 6 was crucial for assigning ΔSL and CSL values. This underscores the essential role of the 6PJ term in accurately modeling the S-L interaction in [Pc2Gd]-.
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Affiliation(s)
- Anas Santria
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
- Research Center for Chemistry, National Research and Innovation Agency (BRIN), Kawasan PUSPITEK, Serpong, Tangerang Selatan, Banten 15314, Indonesia
| | - Naoto Ishikawa
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
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5
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Evangelista FA, Li C, Verma P, Hannon KP, Schriber JB, Zhang T, Cai C, Wang S, He N, Stair NH, Huang M, Huang R, Misiewicz JP, Li S, Marin K, Zhao Z, Burns LA. Forte: A suite of advanced multireference quantum chemistry methods. J Chem Phys 2024; 161:062502. [PMID: 39132791 DOI: 10.1063/5.0216512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Accepted: 06/24/2024] [Indexed: 08/13/2024] Open
Abstract
Forte is an open-source library specialized in multireference electronic structure theories for molecular systems and the rapid prototyping of new methods. This paper gives an overview of the capabilities of Forte, its software architecture, and examples of applications enabled by the methods it implements.
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Affiliation(s)
- Francesco A Evangelista
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Chenyang Li
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Prakash Verma
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Kevin P Hannon
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Jeffrey B Schriber
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
- Department of Chemistry and Biochemistry, Iona University, New Rochelle, New York 10801, USA
| | - Tianyuan Zhang
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Chenxi Cai
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Shuhe Wang
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Nan He
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Nicholas H Stair
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Meng Huang
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Renke Huang
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Jonathon P Misiewicz
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Shuhang Li
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Kevin Marin
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Zijun Zhao
- Department of Chemistry and Cherry Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, USA
| | - Lori A Burns
- Center for Computational Molecular Science and Technology, School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, USA
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6
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Minnette W, Hoy EP, Sand AM. The Use of Effective Core Potentials with Multiconfiguration Pair-Density Functional Theory. J Phys Chem A 2024; 128:6555-6565. [PMID: 39052857 PMCID: PMC11317981 DOI: 10.1021/acs.jpca.4c02666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 06/25/2024] [Accepted: 07/09/2024] [Indexed: 07/27/2024]
Abstract
The reliable and accurate prediction of chemical properties is a key goal in quantum chemistry. Transition-metal-containing complexes can often pose difficulties to quantum mechanical methods for multiple reasons, including many electron configurations contributing to the overall electronic description of the system and the large number of electrons significantly increasing the amount of computational resources required. Often, multiconfigurational electronic structure methods are employed for such systems, and the cost of these calculations can be reduced by the use of an effective core potential (ECP). In this work, we explore both theoretical considerations and performances of ECPs applied in the context of multiconfiguration pair-density functional theory (MC-PDFT). A mixed-basis set approach is used, using ECP basis sets for transition metals and all-electron basis sets for nonmetal atoms. We illustrate the effects that an ECP has on the key parameters used in the computation of MC-PDFT energies, and we explore how ECPs affect the prediction of physical observables for chemical systems. The dissociation curve for a metal dimer was explored, and ionization energies for transition metal-containing diatomic systems were computed and compared to experimental values. In general, we find that ECP approaches employed with MC-PDFT are able to predict ionization energies with improved accuracy compared to traditional Kohn-Sham density functional theory approaches.
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Affiliation(s)
- William
E. Minnette
- Department
of Chemistry and Biochemistry, Butler University, Indianapolis, Indiana 46208, United States
| | - Erik P. Hoy
- Department
of Chemistry, Rowan University, Glassboro, New Jersey 08028, United States
| | - Andrew M. Sand
- Department
of Chemistry and Biochemistry, Butler University, Indianapolis, Indiana 46208, United States
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7
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Enrique-Romero J, Lamberts T. The Complex (Organic) Puzzle of the Formation of Hydrogen Cyanide and Isocyanide on Interstellar Ice Analogues. J Phys Chem Lett 2024; 15:7799-7805. [PMID: 39051824 PMCID: PMC11299174 DOI: 10.1021/acs.jpclett.4c01537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Revised: 07/18/2024] [Accepted: 07/19/2024] [Indexed: 07/27/2024]
Abstract
Aiming to constrain the surface formation of HCN and HNC in the dense interstellar medium on ice-covered dust grains, we investigate the interaction of CN radicals with H2O and CO ices and their subsequent reactivity with H and H2. CN radicals can physisorb on both ices. However, on H2O ice, a hemibond formation is the most common binding mode, while on CO ice, the CN-CO van der Waals complex can form NCCO with a small energy barrier. We show low barrier or barrierless pathways to the formation of HCN and HNC for the reaction H + CN on both ices. Reactivity with H2 involves activation energy barriers to form HCN, which may be overcome by quantum tunneling, while HNC formation is unlikely. The formation of HCN and HNC competes with the formation of NH2CHO on H2O and HCOCN on CO.
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Affiliation(s)
- Joan Enrique-Romero
- Leiden
Institute of Chemistry, Gorlaeus Laboratories, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands
| | - Thanja Lamberts
- Leiden
Institute of Chemistry, Gorlaeus Laboratories, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands
- Leiden
Observatory, Leiden University, P.O. Box 9513, 2300 RA Leiden, The Netherlands
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8
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Zaichenko A, Autschbach J. Triplet-Singlet Emission of d-Block Metal Complexes Characterized by Spin-Orbit Natural Transition Orbitals. ChemistryOpen 2024; 13:e202300291. [PMID: 38441492 PMCID: PMC11319217 DOI: 10.1002/open.202300291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 02/14/2024] [Indexed: 07/12/2024] Open
Abstract
Spin-orbit natural transition orbital (SO-NTO) methodology, recently developed in our group for complete and restricted active space (CAS/RAS) wavefunction calculations, is applied to analyze triplet-to-singlet emission in transition metal complexes. The lowest-energy (longest-wavelength) spin-forbidden transitionT 1 → S 0 ${{{\rm T}}_{1}\to {{\rm S}}_{0}}$ is studied for for [Ir(pbt)2(acac)] and [Re(CO)4(pbt)] and the complexes [W(CO)4(bpy)] and [Mo(CO)4(bpy)]. For the latter complexes, spin-forbidden transitions from higher spin-triplet levels are additionally analyzed. SO-NTOs are compared with spin-free NTOs for the transitions under consideration. The major assignment of a spin-forbidden transition is obtained from the spin-free NTO analysis, while the source of intensity of the electronic transition is revealed by the SO-NTOs.
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Affiliation(s)
- A. Zaichenko
- Department of ChemistryUniversity at BuffaloState University of New YorkBuffaloNY14260-3000USA
| | - J. Autschbach
- Department of ChemistryUniversity at BuffaloState University of New YorkBuffaloNY14260-3000USA
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9
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Mehmood A, Silfies MC, Durden AS, Allison TK, Levine BG. Simulating ultrafast transient absorption spectra from first principles using a time-dependent configuration interaction probe. J Chem Phys 2024; 161:044107. [PMID: 39041880 DOI: 10.1063/5.0215890] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 06/30/2024] [Indexed: 07/24/2024] Open
Abstract
Transient absorption spectroscopy (TAS) is among the most common ultrafast photochemical experiments, but its interpretation remains challenging. In this work, we present an efficient and robust method for simulating TAS signals from first principles. Excited-state absorption and stimulated emission (SE) signals are computed using time-dependent complete active space configuration interaction (TD-CASCI) simulations, leveraging the robustness of time-domain simulation to minimize electronic structure failure. We demonstrate our approach by simulating the TAS signal of 1'-hydroxy-2'-acetonapthone (HAN) from ab initio multiple spawning nonadiabatic molecular dynamics simulations. Our results are compared to gas-phase TAS data recorded from both jet-cooled (T ∼ 40 K) and hot (∼403 K) molecules via cavity-enhanced TAS (CE-TAS). Decomposition of the computed spectrum allows us to assign a rise in the SE signal to excited-state proton transfer and the ultimate decay of the signal to relaxation through a twisted conical intersection. The total cost of computing the observable signal (∼1700 graphics processing unit hours for ∼4 ns of electron dynamics) was markedly less than that of performing the ab initio multiple spawning calculations used to compute the underlying nonadiabatic dynamics.
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Affiliation(s)
- Arshad Mehmood
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, USA
- Institute for Advanced Computational Science, Stony Brook University, Stony Brook, New York 11794, USA
| | - Myles C Silfies
- Department of Physics, Stony Brook University, Stony Brook, New York 11794, USA
| | - Andrew S Durden
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, USA
- Institute for Advanced Computational Science, Stony Brook University, Stony Brook, New York 11794, USA
| | - Thomas K Allison
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, USA
- Department of Physics, Stony Brook University, Stony Brook, New York 11794, USA
| | - Benjamin G Levine
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794, USA
- Institute for Advanced Computational Science, Stony Brook University, Stony Brook, New York 11794, USA
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10
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Yu CP, Chowdhury R, Fu Y, Ghosh P, Zeng W, Mustafa TBE, Grüne J, Walker LE, Congrave DG, Chua XW, Murto P, Rao A, Sirringhaus H, Plasser F, Grey CP, Friend RH, Bronstein H. Near-infrared luminescent open-shell π-conjugated systems with a bright lowest-energy zwitterionic singlet excited state. SCIENCE ADVANCES 2024; 10:eado3476. [PMID: 39047089 PMCID: PMC11268402 DOI: 10.1126/sciadv.ado3476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Accepted: 06/20/2024] [Indexed: 07/27/2024]
Abstract
Open-shell systems with extensive π-conjugation have fascinating properties due to their narrow bandgaps and spin interactions. In this work, we report neutral open-shell di- and polyradical conjugated materials exhibiting intriguing optical and magnetic properties. Our key design advance is the planarized geometry allowing for greater interaction between adjacent spins. This results in absorption and emission in the near infrared at 803 and 1050 nanometers, respectively, and we demonstrate a unique electronic structure where a bright zwitterionic excited state is the lowest-accessible electronic transition. Electron paramagnetic resonance spectroscopy and superconducting quantum interference device measurements reveal that our materials are open-shell singlets with different degrees of spin interactions, dynamics, and antiferromagnetic properties, which likely contributed to the formation of their emissive zwitterionic singlet excited state and near-infrared emission. In addition, our materials show reversible and stable electrochromic switching with more than 500 cycles, indicating their potential for optoelectronic and electrochemical energy storage applications.
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Affiliation(s)
- Craig P. Yu
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Rituparno Chowdhury
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Yao Fu
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
| | - Pratyush Ghosh
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Weixuan Zeng
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
| | - Tarig B. E. Mustafa
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Jeannine Grüne
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Lucy E. Walker
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
| | - Daniel G. Congrave
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
| | - Xian Wei Chua
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Petri Murto
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Akshay Rao
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Henning Sirringhaus
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Felix Plasser
- Department of Chemistry, Loughborough University, Loughborough, LE11 3TU, UK
| | - Clare P. Grey
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
| | - Richard H. Friend
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
| | - Hugo Bronstein
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK
- Department of Physics, Cavendish Laboratory, Cambridge University, Cambridge CB3 0HF, UK
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11
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Réant BL, Mackintosh FJ, Gransbury GK, Mattei CA, Alnami B, Atkinson BE, Bonham KL, Baldwin J, Wooles AJ, Vitorica-Yrezabal IJ, Lee D, Chilton NF, Liddle ST, Mills DP. Tris-Silanide f-Block Complexes: Insights into Paramagnetic Influence on NMR Chemical Shifts. JACS AU 2024; 4:2695-2711. [PMID: 39055148 PMCID: PMC11267535 DOI: 10.1021/jacsau.4c00466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 06/25/2024] [Accepted: 06/26/2024] [Indexed: 07/27/2024]
Abstract
The paramagnetism of f-block ions has been exploited in chiral shift reagents and magnetic resonance imaging, but these applications tend to focus on 1H NMR shifts as paramagnetic broadening makes less sensitive nuclei more difficult to study. Here we report a solution and solid-state (ss) 29Si NMR study of an isostructural series of locally D 3h -symmetric early f-block metal(III) tris-hypersilanide complexes, [M{Si(SiMe3)3}3(THF)2] (1-M; M = La, Ce, Pr, Nd, U); 1-M were also characterized by single crystal and powder X-ray diffraction, EPR, ATR-IR, and UV-vis-NIR spectroscopies, SQUID magnetometry, and elemental analysis. Only one SiMe3 signal was observed in the 29Si ssNMR spectra of 1-M, while two SiMe3 signals were seen in solution 29Si NMR spectra of 1-La and 1-Ce. This is attributed to dynamic averaging of the SiMe3 groups in 1-M in the solid state due to free rotation of the M-Si bonds and dissociation of THF from 1-M in solution to give the locally C 3v -symmetric complexes [M{Si(SiMe3)3}3(THF) n ] (n = 0 or 1), which show restricted rotation of M-Si bonds on the NMR time scale. Density functional theory and complete active space self-consistent field spin-orbit calculations were performed on 1-M and desolvated solution species to model paramagnetic NMR shifts. We find excellent agreement of experimental 29Si NMR data for diamagnetic 1-La, suggesting n = 1 in solution and reasonable agreement of calculated paramagnetic shifts of SiMe3 groups for 1-M (M = Pr and Nd); the NMR shifts for metal-bound 29Si nuclei could only be reproduced for diamagnetic 1-La, showing the current limitations of pNMR calculations for larger nuclei.
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Affiliation(s)
- Benjamin
L. L. Réant
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Fraser J. Mackintosh
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Gemma K. Gransbury
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Carlo Andrea Mattei
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Barak Alnami
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Benjamin E. Atkinson
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Katherine L. Bonham
- Department
of Chemical Engineering, The University
of Manchester, Oxford
Road, Manchester M13 9PL, U.K.
| | - Jack Baldwin
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Ashley J. Wooles
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | | | - Daniel Lee
- Department
of Chemical Engineering, The University
of Manchester, Oxford
Road, Manchester M13 9PL, U.K.
| | - Nicholas F. Chilton
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
- Research
School of Chemistry, The Australian National
University, Sullivans
Creek Road, Canberra 2601, Australian Capital Territory, Australia
| | - Stephen T. Liddle
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - David P. Mills
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
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12
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Vindel-Zandbergen P, González-Vázquez J. Non-adiabatic dynamics of photoexcited cyclobutanone: Predicting structural measurements from trajectory surface hopping with XMS-CASPT2 simulations. J Chem Phys 2024; 161:024104. [PMID: 38984954 DOI: 10.1063/5.0203722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 06/12/2024] [Indexed: 07/11/2024] Open
Abstract
Over the years, theoretical calculations and scalable computer simulations have complemented ultrafast experiments, as they offer the advantage of overcoming experimental restrictions and having access to the whole dynamics. This synergy between theory and experiment promises to yield a deeper understanding of photochemical processes, offering valuable insights into the behavior of complex systems at the molecular level. However, the ability of theoretical models to predict ultrafast experimental outcomes has remained largely unexplored. In this work, we aim to predict the electron diffraction signals of an upcoming ultrafast photochemical experiment using high-level electronic structure calculations and non-adiabatic dynamics simulations. In particular, we perform trajectory surface hopping with extended multi-state complete active space with second order perturbation simulations for understanding the photodissociation of cyclobutanone (CB) upon excitation at 200 nm. Spin-orbit couplings are considered for investigating the role of triplet states. Our simulations capture the bond cleavage after ultrafast relaxation from the 3s Rydberg state, leading to the formation of the previously observed primary photoproducts: CO + cyclopropane/propene (C3 products), ketene, and ethene (C2 products). The ratio of the C3:C2 products is found to be about 1:1. Within 700 fs, the majority of trajectories transition to their electronic ground state, with a small fraction conserving the initial cyclobutanone ring structure. We found a minimal influence of triplet states during the early stages of the dynamics, with their significance increasing at later times. We simulate MeV-ultrafast electron diffraction (UED) patterns from our trajectory results, linking the observed features with specific photoproducts and the underlying structural dynamics. Our analysis reveals highly intense features in the UED signals corresponding to the photochemical processes of CB. These features offer valuable insights into the experimental monitoring of ring opening dynamics and the formation of C3 and C2 photoproducts.
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Affiliation(s)
| | - Jesús González-Vázquez
- Departamento de Química, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
- Institute of Advanced Chemistry (IADChem), Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
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13
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Wang Q, Agarawal V, Hermes MR, Motta M, Rice JE, Jones GO, Gagliardi L. Distinguishing homolytic vs heterolytic bond dissociation of phenylsulfonium cations with localized active space methods. J Chem Phys 2024; 161:014106. [PMID: 38949581 DOI: 10.1063/5.0215697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 06/12/2024] [Indexed: 07/02/2024] Open
Abstract
Modeling chemical reactions with quantum chemical methods is challenging when the electronic structure varies significantly throughout the reaction and when electronic excited states are involved. Multireference methods, such as complete active space self-consistent field (CASSCF), can handle these multiconfigurational situations. However, even if the size of the needed active space is affordable, in many cases, the active space does not change consistently from reactant to product, causing discontinuities in the potential energy surface. The localized active space SCF (LASSCF) is a cheaper alternative to CASSCF for strongly correlated systems with weakly correlated fragments. The method is used for the first time to study a chemical reaction, namely the bond dissociation of a mono-, di-, and triphenylsulfonium cation. LASSCF calculations generate smooth potential energy scans more easily than the corresponding, more computationally expensive CASSCF calculations while predicting similar bond dissociation energies. Our calculations suggest a homolytic bond cleavage for di- and triphenylsulfonium and a heterolytic pathway for monophenylsulfonium.
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Affiliation(s)
- Qiaohong Wang
- Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois 60637, USA
| | - Valay Agarawal
- Department of Chemistry, Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, USA
| | - Matthew R Hermes
- Department of Chemistry, Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, USA
| | - Mario Motta
- IBM Quantum, IBM T. J. Watson Research Center, Yorktown Heights, New York 1059, USA
| | - Julia E Rice
- IBM Quantum, IBM Research-Almaden, San Jose, California 95120, USA
| | - Gavin O Jones
- IBM Quantum, IBM Research-Almaden, San Jose, California 95120, USA
| | - Laura Gagliardi
- Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois 60637, USA
- Department of Chemistry, Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, USA
- James Franck Institute, University of Chicago, Chicago, Illinois 60637, USA
- Argonne National Laboratory, 9700 S, Cass Avenue, Lemont, Illinois 60439, USA
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14
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Giussani A, Segarra-Martí J. XMS-CASPT2//XMS-CASPT2 and XMS-CASPT2//CASSCF at comparison: The impact of dynamic correlation in the excited state optimization of nitronaphthalene. J Chem Phys 2024; 161:011103. [PMID: 38953440 DOI: 10.1063/5.0203550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Accepted: 06/12/2024] [Indexed: 07/04/2024] Open
Abstract
Here, analytical extended multi-state complete active space second-order perturbation method (XMS-CASPT2) gradients are used to rationalize the decreasing triplet quantum yield trend in 2-nitronaphthalene, 1-nitronaphthalene, and 2-methyl-1-nitronaphthalene, a series of nitro-substituted aromatic compounds. Comparison with the XMS-CASPT2//CASSCF (where CASSCF stands for complete active space self-consistent field method) results highlights the importance of dynamic correlation in geometry optimization and challenges the validity of an XMS-CASPT2//CASSCF approach: XMS-CASPT2 S1 minima leads to planar structures, while CASSCF optimizations trigger a pyramidalization of the nitro group. The XMS-CASPT2 results correlate the reported decreasing triplet quantum yield trend in these species to a decrease in S1 to T2 population transfer and an increase in S1-S0 decay, while no such correlation is observed when using XMS-CASPT2//CASSCF data.
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Affiliation(s)
- Angelo Giussani
- Instituto de Ciencia Molecular, Universitat de València, Apartado22085, ES-46071 Valencia, Spain
| | - Javier Segarra-Martí
- Instituto de Ciencia Molecular, Universitat de València, Apartado22085, ES-46071 Valencia, Spain
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15
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Staab JK, Rahman MK, Chilton NF. Intramolecular bridging strategies to suppress two-phonon Raman spin relaxation in dysprosocenium single-molecule magnets. Phys Chem Chem Phys 2024; 26:17539-17548. [PMID: 38885049 PMCID: PMC11202312 DOI: 10.1039/d4cp01716a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 06/06/2024] [Indexed: 06/20/2024]
Abstract
Dy(III) bis-cyclopentadienyl (Cp) sandwich compounds exhibit extremely strong single-ion magnetic anisotropy which imbues them with magnetic memory effects such as magnetic hysteresis, and has put them at the forefront of high-performance single-molecule magnets (SMMs). Owing to the great success of design principles focused on maximising the anisotropy barrier, ever higher Ueff values have been reported leading to significant slow down of single-phonon Orbach spin relaxation. However, anisotropy-based SMM design has largely ignored two-phonon Raman spin relaxation, which is still limiting the temperatures at which a memory effect can be observed. In this work, we study the suppression of Raman relaxation through covalent bridging of the Cp ligands by alkyl chains, testing the hypothesis that increasing the rigidity of the ligand framework results in a blue shift of low frequency vibrations in the first coordination sphere of the Dy(III) ion. This reshaping of the vibrational low-energy density of states (DOS) results in lower occupation of pseudo-acoustic phonons available to drive Raman relaxation at low temperatures. We simulate Orbach and Raman spin relaxation in a series of zero-, mono-, di- and tri-bridged [Dy(Cpttt)2]+ analogues fully ab initio, using a quantum mechanics (QM)/molecular mechanics (MM) condensed phase embedding protocol in a periodic solvent matrix as a generic and experimentally testable environment model that can include (pseudo-)acoustic phononic degrees of freedom. We show that this approach can simulate magnetic relaxation dynamics in the condensed phase for the existing non-bridged [Dy(Cpttt)2]+ compound with quantitative experimental accuracy. Subsequently, we find a significant slowing down of Raman relaxation can be achieved for the singly-bridged SMM, while the introduction of further bridges leads to faster relaxation. A key result being that we find the two-phonon Raman rates correlate with the purity of the first-excited Kramers doublet in terms of its mJ = ±13/2 content. Even though the bridging design principle is successful at progressively reshaping the low-energy DOS, the introduction of linker atoms in the equatorial plane successively degrades magnetic anisotropy, suggesting the importance of refined design of the linker chemistry. The accuracy of our results emphasises the value of a generic periodic solvent embedding model, such that it permits the modelling of molecular spin dynamics in the condensed phase without knowledge of a crystal structure. This allows the study of hypothetical molecules or aggregates under real-world conditions, which we expect to have utility beyond the field of molecular magnetism.
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Affiliation(s)
- Jakob K Staab
- Department of Chemistry, The University of Manchester, Manchester M13 9PL, UK
| | - Md Kholilur Rahman
- Department of Chemistry, The University of Manchester, Manchester M13 9PL, UK
| | - Nicholas F Chilton
- Department of Chemistry, The University of Manchester, Manchester M13 9PL, UK
- Research School of Chemistry, The Australian National University, Canberra 2601, ACT, Australia.
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16
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Weymuth T, Unsleber JP, Türtscher PL, Steiner M, Sobez JG, Müller CH, Mörchen M, Klasovita V, Grimmel SA, Eckhoff M, Csizi KS, Bosia F, Bensberg M, Reiher M. SCINE-Software for chemical interaction networks. J Chem Phys 2024; 160:222501. [PMID: 38857173 DOI: 10.1063/5.0206974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Accepted: 05/09/2024] [Indexed: 06/12/2024] Open
Abstract
The software for chemical interaction networks (SCINE) project aims at pushing the frontier of quantum chemical calculations on molecular structures to a new level. While calculations on individual structures as well as on simple relations between them have become routine in chemistry, new developments have pushed the frontier in the field to high-throughput calculations. Chemical relations may be created by a search for specific molecular properties in a molecular design attempt, or they can be defined by a set of elementary reaction steps that form a chemical reaction network. The software modules of SCINE have been designed to facilitate such studies. The features of the modules are (i) general applicability of the applied methodologies ranging from electronic structure (no restriction to specific elements of the periodic table) to microkinetic modeling (with little restrictions on molecularity), full modularity so that SCINE modules can also be applied as stand-alone programs or be exchanged for external software packages that fulfill a similar purpose (to increase options for computational campaigns and to provide alternatives in case of tasks that are hard or impossible to accomplish with certain programs), (ii) high stability and autonomous operations so that control and steering by an operator are as easy as possible, and (iii) easy embedding into complex heterogeneous environments for molecular structures taken individually or in the context of a reaction network. A graphical user interface unites all modules and ensures interoperability. All components of the software have been made available as open source and free of charge.
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Affiliation(s)
- Thomas Weymuth
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Jan P Unsleber
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Paul L Türtscher
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Miguel Steiner
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Jan-Grimo Sobez
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Charlotte H Müller
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Maximilian Mörchen
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Veronika Klasovita
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Stephanie A Grimmel
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Marco Eckhoff
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Katja-Sophia Csizi
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Francesco Bosia
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Moritz Bensberg
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Markus Reiher
- ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
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17
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Zeng M, Ruan Z, Wu S, Tong M. Field-Induced Slow Magnetic Relaxation in Mononuclear Cobalt(II) Complexes Decorated by Macrocyclic Pentaaza Ligands. Molecules 2024; 29:2810. [PMID: 38930875 PMCID: PMC11206533 DOI: 10.3390/molecules29122810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Revised: 06/04/2024] [Accepted: 06/08/2024] [Indexed: 06/28/2024] Open
Abstract
Two cobalt(II) complexes [CoL1](OTf)2 (1, L1 = 6,6''-di(anilino)-4'-phenyl-2,2':6',2''-terpyridine) and [CoL2](OTf)2·MeOH (2, L2 = 6,6''-di(N,N-dimethylamino)-4'-phenyl-2,2':6',2''-terpyridine) were synthesized and characterized. Crystal structure analyses showed that the spin carries were coordinated by five N atoms from the neutral pentaaza ligands, forming distorted trigonal bipyramidal coordination environments. Ab initio calculations revealed large easy-axial anisotropy in complexes 1 and 2. Magnetic measurements suggest that complexes 1 and 2 are field-induced single-molecule magnets, whose relaxations are mainly predominated by Raman and direct processes.
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Affiliation(s)
| | | | - Siguo Wu
- Key Laboratory of Bioinorganic and Synthetic Chemistry of Ministry of Education, School of Chemistry, Sun Yat-Sen University, Guangzhou 510006, China; (M.Z.); (Z.R.); (M.T.)
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18
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Loreti A, Freixas VM, Avagliano D, Segatta F, Song H, Tretiak S, Mukamel S, Garavelli M, Govind N, Nenov A. WFOT: A Wave Function Overlap Tool between Single- and Multi-Reference Electronic Structure Methods for Spectroscopy Simulation. J Chem Theory Comput 2024; 20:4804-4819. [PMID: 38828948 DOI: 10.1021/acs.jctc.4c00310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
Abstract
We report the development of a novel diagnostic tool, named wave function overlap tool (WFOT), designed to evaluate the overlap between wave functions computed at single-reference [i.e., time-dependent density functional theory or configuration interaction singles (CIS)] and multireference (i.e., CASSCF/CASPT2) electronic structure levels of theory. It relies on truncating the single- and multireference WFs to CIS-like expansions spanning the same configurational space and maximizing the molecular orbital overlap by means of a unitary transformation. To demonstrate the functionality of the tool, we calculate the transient spectrum of acetylacetone by evaluating excited state absorption signals with multireference quality on top of single-reference on-the-fly dynamics simulations. Semiautomatic spectra generation is facilitated by interfacing the tool with the COBRAMM package, which also allows one to use WFOT with several quantum chemistry codes such as Gaussian, NWChem, and OpenMolcas. Other exciting possibilities for the utilization of the code beyond the simulation of transient absorption spectroscopy are eventually discussed.
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Affiliation(s)
- Alessandro Loreti
- Dipartimento di Chimica Industriale "Toso Montanari", University of Bologna, Via Piero Gobetti 85, Bologna 40129, Italy
| | - Victor Manuel Freixas
- Department of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697, United States
| | - Davide Avagliano
- Dipartimento di Chimica Industriale "Toso Montanari", University of Bologna, Via Piero Gobetti 85, Bologna 40129, Italy
| | - Francesco Segatta
- Dipartimento di Chimica Industriale "Toso Montanari", University of Bologna, Via Piero Gobetti 85, Bologna 40129, Italy
| | - Huajing Song
- Physics and Chemistry of Materials, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Sergei Tretiak
- Physics and Chemistry of Materials, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
- Center for Integrated Nanotechnologies, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Shaul Mukamel
- Department of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697, United States
| | - Marco Garavelli
- Dipartimento di Chimica Industriale "Toso Montanari", University of Bologna, Via Piero Gobetti 85, Bologna 40129, Italy
| | - Niranjan Govind
- Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Artur Nenov
- Dipartimento di Chimica Industriale "Toso Montanari", University of Bologna, Via Piero Gobetti 85, Bologna 40129, Italy
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19
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Lin X, Lu X, Tang S, Wu W, Mo Y. Multiconfigurational actinide nitrides assisted by double Möbius aromaticity. Chem Sci 2024; 15:8216-8226. [PMID: 38817572 PMCID: PMC11134321 DOI: 10.1039/d4sc01549e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Accepted: 04/25/2024] [Indexed: 06/01/2024] Open
Abstract
Understanding the bonding nature between actinides and main-group elements remains a key challenge in actinide chemistry due to the involvement of f orbitals. Herein, we propose a unique "aromaticity-assisted multiconfiguration" (AAM) model to elucidate the bonding nature in actinide nitrides (An2N2, An = Ac, Th, Pa, U). Each planar four-membered An2N2 with equivalent An-N bonds possesses four delocalized π electrons and four delocalized σ electrons, forming a new family of double Möbius aromaticity that contributes to the molecular stability. The unprecedented aromaticity further supports actinide nitrides to exhibit multiconfigurational characters, where the unpaired electrons (2, 4 or 6 in naked Th2N2, Pa2N2 or U2N2, respectively) either are spin-free and localized on metal centres or form metal-ligand bonds. High-level multiconfigurational computations confirm an open-shell singlet ground state for actinide nitrides, with small energy gaps to high spin states. This is consistent with the antiferromagnetic nature observed experimentally in uranium nitrides. The novel AAM bonding model can be authenticated in both experimentally identified compounds containing a U2N2 motif and other theoretically modelled An2N2 clusters and is thus expected to be a general chemical bonding pattern between actinides and main-group elements.
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Affiliation(s)
- Xuhui Lin
- School of Physics, Central South University Changsha Hunan 410083 China
| | - Xiaoli Lu
- School of Chemistry, Southwest Jiaotong University Chengdu Sichuan 610031 China
| | - Shenghui Tang
- School of Chemistry, Southwest Jiaotong University Chengdu Sichuan 610031 China
| | - Wei Wu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces, iChEM, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry and College of Chemistry and Chemical Engineering, Xiamen University Xiamen Fujian 361005 China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro Greensboro NC 27401 USA
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20
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Hutton L, Moreno Carrascosa A, Prentice AW, Simmermacher M, Runeson JE, Paterson MJ, Kirrander A. Using a multistate mapping approach to surface hopping to predict the ultrafast electron diffraction signal of gas-phase cyclobutanone. J Chem Phys 2024; 160:204307. [PMID: 38814011 DOI: 10.1063/5.0203667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 05/05/2024] [Indexed: 05/31/2024] Open
Abstract
Using the recently developed multistate mapping approach to surface hopping (multistate MASH) method combined with SA(3)-CASSCF(12,12)/aug-cc-pVDZ electronic structure calculations, the gas-phase isotropic ultrafast electron diffraction (UED) of cyclobutanone is predicted and analyzed. After excitation into the n-3s Rydberg state (S2), cyclobutanone can relax through two S2/S1 conical intersections, one characterized by compression of the CO bond and the other by dissociation of the α-CC bond. Subsequent transfer into the ground state (S0) is then achieved via two additional S1/S0 conical intersections that lead to three reaction pathways: α ring-opening, ethene/ketene production, and CO liberation. The isotropic gas-phase UED signal is predicted from the multistate MASH simulations, allowing for a direct comparison to the experimental data. This work, which is a contribution to the cyclobutanone prediction challenge, facilitates the identification of the main photoproducts in the UED signal and thereby emphasizes the importance of dynamics simulations for the interpretation of ultrafast experiments.
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Affiliation(s)
- Lewis Hutton
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
| | - Andrés Moreno Carrascosa
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
| | - Andrew W Prentice
- Institute of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Mats Simmermacher
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
| | - Johan E Runeson
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
| | - Martin J Paterson
- Institute of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Adam Kirrander
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
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21
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Dobrautz W, Sokolov IO, Liao K, Ríos PL, Rahm M, Alavi A, Tavernelli I. Toward Real Chemical Accuracy on Current Quantum Hardware Through the Transcorrelated Method. J Chem Theory Comput 2024; 20:4146-4160. [PMID: 38723159 PMCID: PMC11137825 DOI: 10.1021/acs.jctc.4c00070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Revised: 04/15/2024] [Accepted: 04/16/2024] [Indexed: 05/29/2024]
Abstract
Quantum computing is emerging as a new computational paradigm with the potential to transform several research fields including quantum chemistry. However, current hardware limitations (including limited coherence times, gate infidelities, and connectivity) hamper the implementation of most quantum algorithms and call for more noise-resilient solutions. We propose an explicitly correlated Ansatz based on the transcorrelated (TC) approach to target these major roadblocks directly. This method transfers, without any approximation, correlations from the wave function directly into the Hamiltonian, thus reducing the resources needed to achieve accurate results with noisy quantum devices. We show that the TC approach allows for shallower circuits and improves the convergence toward the complete basis set limit, providing energies within chemical accuracy to experiment with smaller basis sets and, thus, fewer qubits. We demonstrate our method by computing bond lengths, dissociation energies, and vibrational frequencies close to experimental results for the hydrogen dimer and lithium hydride using two and four qubits, respectively. To demonstrate our approach's current and near-term potential, we perform hardware experiments, where our results confirm that the TC method paves the way toward accurate quantum chemistry calculations already on today's quantum hardware.
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Affiliation(s)
- Werner Dobrautz
- Department
of Chemistry and Chemical Engineering, Chalmers
University of Technology, 41296 Gothenburg, Sweden
| | - Igor O. Sokolov
- IBM
Quantum, IBM Research Zurich, Säumerstrasse 4, 8803 Rüschlikon, Switzerland
| | - Ke Liao
- Max
Planck Institute for Solid State Research, Heisenbergstr. 1, 70569 Stuttgart, Germany
| | - Pablo López Ríos
- Max
Planck Institute for Solid State Research, Heisenbergstr. 1, 70569 Stuttgart, Germany
| | - Martin Rahm
- Department
of Chemistry and Chemical Engineering, Chalmers
University of Technology, 41296 Gothenburg, Sweden
| | - Ali Alavi
- Max
Planck Institute for Solid State Research, Heisenbergstr. 1, 70569 Stuttgart, Germany
- Yusuf
Hamied Department of Chemistry, University
of Cambridge, Lensfield
Road, Cambridge CB2 1EW, U.K.
| | - Ivano Tavernelli
- IBM
Quantum, IBM Research Zurich, Säumerstrasse 4, 8803 Rüschlikon, Switzerland
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22
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Chen QW, Ding YS, Zhu XF, Wang BW, Zheng Z. Substituent Positioning Effects on the Magnetic Properties of Sandwich-Type Erbium(III) Complexes with Bis(trimethylsilyl)-Substituted Cyclooctatetraenyl Ligands. Inorg Chem 2024; 63:9511-9519. [PMID: 38135507 DOI: 10.1021/acs.inorgchem.3c03369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2023]
Abstract
Lanthanide complexes with judiciously designed ligands have been extensively studied for their potential applications as single-molecule magnets. With the influence of ligands on their magnetic properties generally established, recent research has unearthed certain effects inherent to site differentiation due to the different types and varying numbers of substituents on the same ligand platform. Using two new sandwich-type Er(III) complexes with cyclooctatetraenyl (COT) ligands featuring two differently positioned trimethylsilyl (TMS) substituents, namely, [Li(DME)Er(COT1,5-TMS2)2]n (Er1) and [Na(DME)3][Er(COT1,3-TMS2)2] (Er2) [COT1,3-TMS2 and COT1,5-TMS2 donate 1,3- and 1,5-bis(trimethylsilyl)-substituted cyclooctatetraenyl ligands, respectively; DME = 1,2-dimethoxyethane], and with reference to previously reported [Li(DME)3][Er(COT1,4-TMS2)2] (A) and [K(DME)2][Er(COT1,4-TMS2)2] (B), any possible substituent position effects have been explored for the first time. The rearrangement of the TMS substituents from the starting COT1,4-TMS2 to COT1,3-TMS2 and COT1,5-TMS2, by way of formal migration of the TMS group, was thermally induced in the case of Er1, while for the formation of Er2, the use of Na+ in the placement of its Li+ and K+ congeners is essential. Both Er1 and Er2 display single-molecule magnetic behaviors with energy barriers of 170(3) and 172(6) K, respectively. Magnetic hysteresis loops, butterfly-shaped for Er1 and wide open for Er2, were observed up to 12 K for Er1 and 13 K for Er2. Studies of magnetic dynamics reveal the different pathways for relaxation of magnetization below 10 K, mainly by the Raman process for Er1 and by quantum tunneling of magnetization for Er2, leading to the order of magnitude difference in magnetic relaxation times and sharply different magnetic hysteresis loops.
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Affiliation(s)
- Qi-Wei Chen
- School of Chemistry and Life Science, Changchun University of Technology, Changchun 130012, China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, China
| | - You-Song Ding
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, China
- Key University Laboratory of Rare Earth Chemistry of Guangdong, Southern University of Science and Technology, Shenzhen, Guangdong 518055, China
| | - Xiao-Fei Zhu
- School of Chemistry and Life Science, Changchun University of Technology, Changchun 130012, China
| | - Bing-Wu Wang
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Zhiping Zheng
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, China
- Key University Laboratory of Rare Earth Chemistry of Guangdong, Southern University of Science and Technology, Shenzhen, Guangdong 518055, China
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23
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Hennefarth MR, Hermes MR, Truhlar DG, Gagliardi L. Analytic Nuclear Gradients for Complete Active Space Linearized Pair-Density Functional Theory. J Chem Theory Comput 2024; 20:3637-3658. [PMID: 38639604 DOI: 10.1021/acs.jctc.4c00095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
Abstract
Accurately modeling photochemical reactions is difficult due to the presence of conical intersections and locally avoided crossings, as well as the inherently multiconfigurational character of excited states. As such, one needs a multistate method that incorporates state interaction in order to accurately model the potential energy surface at all nuclear coordinates. The recently developed linearized pair-density functional theory (L-PDFT) is a multistate extension of multiconfiguration PDFT, and it has been shown to be a cost-effective post-MCSCF method (as compared to more traditional and expensive multireference many-body perturbation methods or multireference configuration interaction methods) that can accurately model potential energy surfaces in regions of strong nuclear-electronic coupling in addition to accurately predicting Franck-Condon vertical excitations. In this paper, we report the derivation of analytic gradients for L-PDFT and their implementation in the PySCF-forge software, and we illustrate the utility of these gradients for predicting ground- and excited-state equilibrium geometries and adiabatic excitation energies for formaldehyde, s-trans-butadiene, phenol, and cytosine.
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Affiliation(s)
- Matthew R Hennefarth
- Department of Chemistry and Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Matthew R Hermes
- Department of Chemistry and Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, United States
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Laura Gagliardi
- Department of Chemistry, Pritzker School of Molecular Engineering, The James Franck Institute, and Chicago Center for Theoretical Chemistry, University of Chicago, Chicago, Illinois 60637, United States
- Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
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24
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Barrios LA, Capó N, Boulehjour H, Reta D, Tejedor I, Roubeau O, Aromí G. Modulated spin dynamics of [Co 2] coordination helicates via differential strand composition. Dalton Trans 2024; 53:7611-7618. [PMID: 38618945 DOI: 10.1039/d4dt00629a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Coordination supramolecular chemistry provides a versatile entry into materials with functionalities of technological relevance at the nanoscale. Here, we describe how two different bis-pyrazolylpyridine ligands (L1 and L2) assemble with Co(II) ions into dinuclear triple-stranded helicates, in turn, encapsulating different anionic guests. These constructs are described as (Cl@[Co2(L1)3])3+, (SiF6@[Co2(L1)(L2)3])2+ and (ClO4@[Co2(L2)3])3+, as established by single-crystal X-ray diffraction. Extensive magnetic and calorimetric measurements, numerical treatments and theoretical calculations reveal that the individual Co(II) centers of these supramolecular entities exhibit field-induced slow relaxation of magnetization, dominated by direct and Raman mechanisms. While the small variations in the spin dynamics are not easily correlated with the evident structural differences among the three species, the specific heat measurements suggest two vibronic pathways of magnetic relaxation: one that would be associated with the host lattice and another linked with the guest.
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Affiliation(s)
- Leoní A Barrios
- Departament de Química Inorgànica i Orgànica and IN2UB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain.
| | - Nuria Capó
- Departament de Química Inorgànica i Orgànica and IN2UB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain.
| | - Hanae Boulehjour
- Donostia International Physics Center (DIPC), Donostia, 20018, Spain
| | - Daniel Reta
- Faculty of Chemistry, The University of the Basque Country UPV/EHU, Donostia, 20018, Spain
- Donostia International Physics Center (DIPC), Donostia, 20018, Spain
- IKERBASQUE, Basque Foundation for Science, Bilbao, 48013, Spain
| | - Inés Tejedor
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC and Universidad de Zaragoza, Plaza San Francisco s/n, 50009, Zaragoza, Spain
| | - Olivier Roubeau
- Instituto de Nanociencia y Materiales de Aragón (INMA), CSIC and Universidad de Zaragoza, Plaza San Francisco s/n, 50009, Zaragoza, Spain
| | - Guillem Aromí
- Departament de Química Inorgànica i Orgànica and IN2UB, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain.
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25
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Focke K, De Santis M, Wolter M, Martinez B JA, Vallet V, Pereira Gomes AS, Olejniczak M, Jacob CR. Interoperable workflows by exchanging grid-based data between quantum-chemical program packages. J Chem Phys 2024; 160:162503. [PMID: 38686818 DOI: 10.1063/5.0201701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Accepted: 04/02/2024] [Indexed: 05/02/2024] Open
Abstract
Quantum-chemical subsystem and embedding methods require complex workflows that may involve multiple quantum-chemical program packages. Moreover, such workflows require the exchange of voluminous data that go beyond simple quantities, such as molecular structures and energies. Here, we describe our approach for addressing this interoperability challenge by exchanging electron densities and embedding potentials as grid-based data. We describe the approach that we have implemented to this end in a dedicated code, PyEmbed, currently part of a Python scripting framework. We discuss how it has facilitated the development of quantum-chemical subsystem and embedding methods and highlight several applications that have been enabled by PyEmbed, including wave-function theory (WFT) in density-functional theory (DFT) embedding schemes mixing non-relativistic and relativistic electronic structure methods, real-time time-dependent DFT-in-DFT approaches, the density-based many-body expansion, and workflows including real-space data analysis and visualization. Our approach demonstrates, in particular, the merits of exchanging (complex) grid-based data and, in general, the potential of modular software development in quantum chemistry, which hinges upon libraries that facilitate interoperability.
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Affiliation(s)
- Kevin Focke
- Institute of Physical and Theoretical Chemistry, Technische Universität Braunschweig, Gaußstraße 17, 38106 Braunschweig, Germany
| | - Matteo De Santis
- CNRS, UMR 8523-PhLAM-Physique des Lasers Atomes et Molécules, Univ. Lille, F-59000 Lille, France
| | - Mario Wolter
- Institute of Physical and Theoretical Chemistry, Technische Universität Braunschweig, Gaußstraße 17, 38106 Braunschweig, Germany
| | - Jessica A Martinez B
- CNRS, UMR 8523-PhLAM-Physique des Lasers Atomes et Molécules, Univ. Lille, F-59000 Lille, France
- Department of Chemistry, Rutgers University, Newark, New Jersey 07102, USA
| | - Valérie Vallet
- CNRS, UMR 8523-PhLAM-Physique des Lasers Atomes et Molécules, Univ. Lille, F-59000 Lille, France
| | | | - Małgorzata Olejniczak
- Centre of New Technologies, University of Warsaw, S. Banacha 2c, 02-097 Warsaw, Poland
| | - Christoph R Jacob
- Institute of Physical and Theoretical Chemistry, Technische Universität Braunschweig, Gaußstraße 17, 38106 Braunschweig, Germany
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26
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Jaiswal VK, Montorsi F, Aleotti F, Segatta F, Keefer D, Mukamel S, Nenov A, Conti I, Garavelli M. Ultrafast photochemistry and electron-diffraction spectra in n → (3s) Rydberg excited cyclobutanone resolved at the multireference perturbative level. J Chem Phys 2024; 160:164316. [PMID: 38686819 DOI: 10.1063/5.0203624] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 04/10/2024] [Indexed: 05/02/2024] Open
Abstract
We study the ultrafast time evolution of cyclobutanone excited to the singlet n → Rydberg state through non-adiabatic surface-hopping simulationsperformed at extended multi-state complete active space second-order perturbation (XMS-CASPT2) level of theory. These dynamics predict relaxation to the ground-state with a timescale of 822 ± 45 fs with minimal involvement of the triplets. The major relaxation path to the ground-state involves a three-state degeneracy region and leads to a variety of fragmented photoproducts. We simulate the resulting time-resolved electron-diffraction spectra, which track the relaxation of the excited state and the formation of various photoproducts in the ground state.
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Affiliation(s)
- V K Jaiswal
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - F Montorsi
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - F Aleotti
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - F Segatta
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Daniel Keefer
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Mainz 55128, Germany
| | - Shaul Mukamel
- Department of Chemistry and Department of Physics and Astronomy, University of California Irvine, Irvine, California 92697, USA
| | - A Nenov
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - I Conti
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - M Garavelli
- Dipartimento di Chimica industriale "Toso Montanari," Università di Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
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27
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Drabik G, Radoń M. Approaching the Complete Basis Set Limit for Spin-State Energetics of Mononuclear First-Row Transition Metal Complexes. J Chem Theory Comput 2024; 20:3199-3217. [PMID: 38574194 PMCID: PMC11044276 DOI: 10.1021/acs.jctc.4c00092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 03/19/2024] [Accepted: 03/20/2024] [Indexed: 04/06/2024]
Abstract
Convergence to the complete basis set (CBS) limit is analyzed for the problem of spin-state energetics in mononuclear first-row transition metal (TM) complexes by taking under scrutiny a benchmark set of 18 energy differences between spin states for 13 chemically diverse TM complexes. The performance of conventional CCSD(T) and explicitly correlated CCSD(T)-F12a/b calculations in approaching the CCSD(T)/CBS limits is systematically studied. An economic computational protocol is developed based on the CCSD-F12a approximation and (here proposed) modified scaling of the perturbative triples term (T#). This computational protocol recovers the relative spin-state energetics of the benchmark set in excellent agreement with the reference CCSD(T)/CBS limits (mean absolute deviation of 0.4, mean signed deviation of 0.2, and maximum deviation of 0.8 kcal/mol) and enables performing canonical CCSD(T) calculations for mononuclear TM complexes sized up to ca. 50 atoms, which is illustrated by application to heme-related metalloporphyrins. Furthermore, a good transferability of the basis set incompleteness error (BSIE) is demonstrated for spin-state energetics computed using CCSD(T) and other wave function methods (MP2, CASPT2, CASPT2/CC, NEVPT2, and MRCI + Q), which justifies efficient focal-point approximations and simplifies the construction of multimethod benchmark studies.
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Affiliation(s)
- Gabriela Drabik
- Jagiellonian
University, Doctoral School
of Exact and Natural Sciences, Łojasiewicza 11, 30-348 Kraków, Poland
- Jagiellonian
University, Faculty of Chemistry, Gronostajowa 2, 30-387, Kraków Poland
| | - Mariusz Radoń
- Jagiellonian
University, Faculty of Chemistry, Gronostajowa 2, 30-387, Kraków Poland
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28
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Shukla P, Tarannum I, Roy S, Rajput A, Lama P, Singh SK, Kłak J, Lee J, Das S. Effect of diamagnetic Zn(II) ions on the SMM properties of a series of trinuclear ZnDy 2 and tetranuclear Zn 2Dy 2 (Ln III = Dy, Tb, Gd) complexes: combined experimental and theoretical studies. Dalton Trans 2024; 53:7053-7066. [PMID: 38564260 DOI: 10.1039/d4dt00417e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
To study the effect of diamagnetic ions on magnetic interactions, utilizing a compartmental ligand (Z)-2-(hydroxymethyl)-4-methyl-6-((quinolin-8-ylimino)methyl)phenol (LH2), two different series of ZnII-LnIII complexes, namely the trinuclear series of [DyZn2(L)2(μ2-OAc)2(CH3OH)2]·NO3·MeOH (1), [TbZn2(L)2(μ2-OAc)2(CH3OH)2]·NO3·5MeOH·H2O (2), and [GdZn2(L)2(μ2-OAc)2(CH3OH)2]·NO3·MeOH·CHCl3 (3) and the tetranuclear series of [Dy2Zn2(LH)4(NO3)4(μ2OAc)]·NO3·MeOH·H2O (4), [Tb2Zn2(LH)4(NO3)4(μ2-OAc)]·NO3·MeOH·2H2O (5), and [Gd2Zn2(LH)4(NO3)4(μ2-OAc)]·NO3·MeOH·2H2O (6), were synthesized. Trinuclear ZnII-LnIII complexes 1-3 consist of one LnIII ion sandwiched between two peripheral ZnII ions forming a bent type ZnII-DyIII-ZnII array with an angle of 110.64°. Tetranuclear ZnII-LnIII complexes 4-6 are basically a combination of two dinuclear moieties of [LnZn(LH)2(NO3)2]+ connected by one bidentate bridging acetate ion in μ2-OAc coordination mode. The detailed magnetic analysis reveals that complexes 1 and 4 are single molecule magnets having energy barriers of 34.98 K and 46.71 K with relaxation times (τ0) of 5.05 × 10-4 s and 5.24 × 10-4 s, respectively. Ab initio calculations were employed to analyze the magnetic anisotropy and magnetic exchange interaction between the ZnII and LnIII centers with the aim of gaining better insights into the magnetic dynamics of complexes 1-6.
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Affiliation(s)
- Pooja Shukla
- Department of Basic Sciences, Chemistry Discipline, Institute of Infrastructure Technology Research and Management, Near Khokhra Circle, Maninagar East, Ahmedabad-380026, Gujarat, India.
- Department of Chemistry, Johannes Gutenberg University, Duesbergweg 10-14, 55128 Mainz, Germany
| | - Ibtesham Tarannum
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi-502285, Sangareddy, Telangana, India.
| | - Soumalya Roy
- Department of Chemistry, Chonnam National University, 77 Yongbong-ro, Buk-gu, Gwangju 61186, Republic of Korea.
| | - Amit Rajput
- Department of Chemistry, J. C. Bose University of Science & Technology, YMCA, Faridabad 121006, Haryana, India
| | - Prem Lama
- CSIR-Indian Institute of Petroleum, Nanocatalysis Area, LSP Division, Haridwar Road, Mokhampur, Dehradun 248005, India
| | - Saurabh Kumar Singh
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi-502285, Sangareddy, Telangana, India.
| | - Julia Kłak
- Faculty of Chemistry, University of Wroclaw, Wroclaw 50-383, Poland.
| | - Junseong Lee
- Department of Chemistry, Chonnam National University, 77 Yongbong-ro, Buk-gu, Gwangju 61186, Republic of Korea.
| | - Sourav Das
- Department of Basic Sciences, Chemistry Discipline, Institute of Infrastructure Technology Research and Management, Near Khokhra Circle, Maninagar East, Ahmedabad-380026, Gujarat, India.
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29
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Lau N, Ghosh D, Bourne-Worster S, Kumar R, Whitaker WA, Heitland J, Davies JA, Karras G, Clark IP, Greetham GM, Worth GA, Orr-Ewing AJ, Fielding HH. Unraveling the Ultrafast Photochemical Dynamics of Nitrobenzene in Aqueous Solution. J Am Chem Soc 2024; 146:10407-10417. [PMID: 38572973 PMCID: PMC11027148 DOI: 10.1021/jacs.3c13826] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 03/09/2024] [Accepted: 03/11/2024] [Indexed: 04/05/2024]
Abstract
Nitroaromatic compounds are major constituents of the brown carbon aerosol particles in the troposphere that absorb near-ultraviolet (UV) and visible solar radiation and have a profound effect on the Earth's climate. The primary sources of brown carbon include biomass burning, forest fires, and residential burning of biofuels, and an important secondary source is photochemistry in aqueous cloud and fog droplets. Nitrobenzene is the smallest nitroaromatic molecule and a model for the photochemical behavior of larger nitroaromatic compounds. Despite the obvious importance of its droplet photochemistry to the atmospheric environment, there have not been any detailed studies of the ultrafast photochemical dynamics of nitrobenzene in aqueous solution. Here, we combine femtosecond transient absorption spectroscopy, time-resolved infrared spectroscopy, and quantum chemistry calculations to investigate the primary steps following the near-UV (λ ≥ 340 nm) photoexcitation of aqueous nitrobenzene. To understand the role of the surrounding water molecules in the photochemical dynamics of nitrobenzene, we compare the results of these investigations with analogous measurements in solutions of methanol, acetonitrile, and cyclohexane. We find that vibrational energy transfer to the aqueous environment quenches internal excitation, and therefore, unlike the gas phase, we do not observe any evidence for formation of photoproducts on timescales up to 500 ns. We also find that hydrogen bonding between nitrobenzene and surrounding water molecules slows the S1/S0 internal conversion process.
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Affiliation(s)
- Nicholas
A. Lau
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - Deborin Ghosh
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, U.K.
| | | | - Rhea Kumar
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - William A. Whitaker
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, U.K.
| | - Jonas Heitland
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - Julia A. Davies
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - Gabriel Karras
- Central
Laser Facility, Research Complex at Harwell, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Ian P. Clark
- Central
Laser Facility, Research Complex at Harwell, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Gregory M. Greetham
- Central
Laser Facility, Research Complex at Harwell, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, U.K.
| | - Graham A. Worth
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
| | - Andrew J. Orr-Ewing
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, U.K.
| | - Helen H. Fielding
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
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30
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Sethio D, Azzopardi E, Fdez. Galván I, Lindh R. A Story of Three Levels of Sophistication in SCF/KS-DFT Orbital Optimization Procedures. J Phys Chem A 2024; 128:2472-2486. [PMID: 38483190 PMCID: PMC10983011 DOI: 10.1021/acs.jpca.3c07647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2023] [Revised: 02/23/2024] [Accepted: 02/23/2024] [Indexed: 04/04/2024]
Abstract
In this work, three versions of self-consistent field/Kohn-Sham density functional theory (SCF/KS-DFT) orbital optimization are described and benchmarked. The methods are a modified version of the geometry version of the direct inversion in the iterative subspace approach (which we call r-GDIIS), the modified restricted step rational function optimization method (RS-RFO), and the novel subspace gradient-enhanced Kriging method combined with restricted variance optimization (S-GEK/RVO). The modifications introduced are aimed at improving the robustness and computational scaling of the procedures. In particular, the subspace approach in S-GEK/RVO allows the application to SCF/KS-DFT optimization of a machine learning technique that has proven to be successful in geometry optimizations. The performance of the three methods is benchmarked for a large number of small- to medium-sized organic molecules, at equilibrium structures and close to a transition state, and a second set of molecules containing closed- and open-shell transition metals. The results indicate the importance of the resetting technique in boosting the performance of the r-GDIIS procedure. Moreover, it is demonstrated that already at the inception of the subspace version of GEK to optimize SCF wave functions, it displays superior and robust convergence properties as compared to those of the standard state-of-the-art SCF/KS-DFT optimization methods.
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Affiliation(s)
- Daniel Sethio
- Department
of Chemistry—BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
- Department
of Chemistry—Ångström, Uppsala University, P.O. Box 538, SE-75121 Uppsala, Sweden
| | - Emily Azzopardi
- Department
of Chemistry—BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
| | - Ignacio Fdez. Galván
- Department
of Chemistry—BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
| | - Roland Lindh
- Department
of Chemistry—BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
- Uppsala
Center for Computational Chemistry (UC3), Uppsala University, P.O. Box 576, SE-751 23 Uppsala, Sweden
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31
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Scott M, Rodrigues GLS, Li X, Delcey MG. Variational Pair-Density Functional Theory: Dealing with Strong Correlation at the Protein Scale. J Chem Theory Comput 2024; 20:2423-2432. [PMID: 38217859 DOI: 10.1021/acs.jctc.3c01240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2024]
Abstract
Multiconfigurational pair-density functional theory (MC-PDFT) offers a promising solution to the challenges faced by traditional density functional theory (DFT) in addressing molecular systems containing transition metals, open-shells, or strong correlations in general. By utilizing both the density and on-top pair-density, MC-PDFT can make use of a more flexible multiconfigurational wave function to capture the necessary static correlation, while the pair-density functional also includes the effect of dynamic correlation. So far, MC-PDFT has been used after a multiconfigurational self-consistent field (MCSCF) step, using the orbitals and configuration interaction coefficients from the converged MCSCF wave function to compute PDFT energies and properties. Here, instead, we propose to perform a direct optimization of the wave function using the pair-density functionals, resulting in a variational formulation of MC-PDFT. We derive the expressions for the wave function gradient and illustrate their similarity to standard MCSCF equations. Furthermore, we illustrate the accuracy on a set of singlet-triplet gaps as well as dissociation curves. Our findings highlight one of MC-PDFT's standout features: a reduced dependency on the active space size compared to conventional multiconfigurational wave function methodologies. Additionally, we show that the computational cost of MC-PDFT is potentially lower than MCSCF and often on-par with standard Kohn-Sham DFT, which is demonstrated by performing a MC-PDFT calculation of the entire ferredoxin protein with 1447 atoms and nearly 12 000 basis functions.
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Affiliation(s)
- Mikael Scott
- Division of Theoretical Chemistry and Biology, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Gabriel L S Rodrigues
- Division of Theoretical Chemistry and Biology, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Xin Li
- PDC Center for High Performance Computing, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Mickael G Delcey
- Division of Theoretical Chemistry, Department of Chemistry, Lund University, SE-221 00 Lund, Sweden
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32
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Liao C, Hoyer CE, Banerjee Ghosh R, Jenkins AJ, Knecht S, Frisch MJ, Li X. Comparison of Variational and Perturbative Spin-Orbit Coupling within Two-Component CASSCF. J Phys Chem A 2024. [PMID: 38489510 DOI: 10.1021/acs.jpca.3c08031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2024]
Abstract
The modeling of spin-orbit coupling (SOC) remains a challenge in computational chemistry due to the high computational cost. With the rising popularity of spin-driven processes and f-block metals in chemistry and materials science, it is incumbent on the community to develop accurate multiconfigurational SOC methods that scale to large systems and understand the limits of different treatments of SOC. Herein, we introduce an implementation of perturbative SOC in scalar-relativistic two-component CASSCF (srX2C-CASSCF-SO). Perspectives on the limitations and accuracy of srX2C-CASSCF-SO are presented via benchmark calculations.
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Affiliation(s)
- Can Liao
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Chad E Hoyer
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Rahoul Banerjee Ghosh
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Andrew J Jenkins
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Stefan Knecht
- Algorithmiq Ltd, Kanavakatu 3C, FI-00160 Helsinki, Finland
- ETH Zürich, Department of Chemistry and Applied Life Sciences, Vladimir-Prelog-Weg 1-5/10, CH-8093 Zürich, Switzerland
| | - Michael J Frisch
- Gaussian Inc., 340 Quinnipiac Street, Bldg 40, Wallingford, Connecticut 06492, United States
| | - Xiaosong Li
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
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33
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Cheng Y, Ma H. Renormalized-Residue-Based Multireference Configuration Interaction Method for Strongly Correlated Systems. J Chem Theory Comput 2024; 20:1988-2009. [PMID: 38380619 DOI: 10.1021/acs.jctc.3c01247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2024]
Abstract
The implementation of multireference configuration interaction (MRCI) methods in quantum systems with large active spaces is hindered by the expansion of configuration bases or the intricate handling of reduced density matrices (RDMs). In this work, we present a spin-adapted renormalized-residue-based MRCI (RR-MRCI) approach that leverages renormalized residues to effectively capture the entanglement between active and inactive orbitals. This approach is reinforced by a novel efficient algorithm, which also facilitates an efficient deployment of spin-adapted matrix product state MRCI (MPS-MRCI). The RR-MRCI framework possesses several advantages: (1) It considers the orbital entanglement and utilizes highly compressed MPS structure, improving computational accuracy and efficiency compared with internally contracted (ic) MRCI. (2) Utilizing small-sized buffer environments of a few external orbitals as probes based on quantum information theory, it enhances computational efficiency over MPS-MRCI and offers potential application to large molecular systems. (3) The RR framework can be implemented in conjunction with ic-MRCI, eliminating the need for high-rank RDMs, by using distinct renormalized residues. We evaluated this method across nine diverse molecular systems, including Cu2O22+ with an active space of (24e,24o) and two complexes of lanthanide and actinide with active space (38e,36o), demonstrating the method's versatility and efficacy.
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Affiliation(s)
- Yifan Cheng
- School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Haibo Ma
- Qingdao Institute for Theoretical and Computational Sciences, School of Chemistry and Chemical Engineering, Shandong University, Qingdao, Shandong 266237, China
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34
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Calio PB, Hermes MR, Bao JJ, Galván IF, Lindh R, Truhlar DG, Gagliardi L. Minimum-Energy Conical Intersections by Compressed Multistate Pair-Density Functional Theory. J Phys Chem A 2024; 128:1698-1706. [PMID: 38407944 DOI: 10.1021/acs.jpca.3c07048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2024]
Abstract
Compressed multistate pair-density functional theory (CMS-PDFT) is a multistate version of multiconfiguration pair-density functional theory that can capture the correct topology of coupled potential energy surfaces (PESs) around conical intersections. In this work, we develop interstate coupling vectors (ISCs) for CMS-PDFT in the OpenMolcas and PySCF/mrh electronic structure packages. Yet, the main focus of this work is using ISCs to calculate minimum-energy conical intersections (MECIs) by CMS-PDFT. This is performed using the projected constrained optimization method in OpenMolcas, which uses ISCs to restrain the iterations to the conical intersection seam. We optimize the S1/S0 MECIs for ethylene, butadiene, and benzene and show that CMS-PDFT gives smooth PESs in the vicinities of the MECIs. Furthermore, the CMS-PDFT MECIs are in good agreement with the MECI calculated by the more expensive XMS-CASPT2 method.
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Affiliation(s)
- Paul B Calio
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
| | - Matthew R Hermes
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
| | - Jie J Bao
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | | | - Roland Lindh
- Department of Chemistry-BMC, Uppsala University, Uppsala 75123, Sweden
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Laura Gagliardi
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
- Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
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35
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Jaiswal VK, Taddei M, Nascimento DR, Garavelli M, Conti I, Nenov A. Reconciling TD-DFT and CASPT2 electronic structure methods for describing the photophysics of DNA. Photochem Photobiol 2024; 100:443-452. [PMID: 38356286 DOI: 10.1111/php.13922] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 01/17/2024] [Accepted: 01/26/2024] [Indexed: 02/16/2024]
Abstract
Time-dependent density functional theory (TD-DFT) and multiconfigurational second-order perturbation theory (CASPT2) are two of the most widely used methods to investigate photoinduced dynamics in DNA-based systems. These methods sometimes give diverse dynamics in physiological environments usually modeled by quantum mechanics/molecular mechanics (QM/MM) protocol. In this work, we demonstrate for the uridine test case that the underlying topology of the potential energy surfaces of electronic states involved in photoinduced relaxation is similar in both electronic structure methods. This is verified by analyzing surface-hopping dynamics performed at the QM/MM level on aqueous solvated uridine at TD-DFT and CASPT2 levels. By constraining the dynamics to remain onπ π * state we observe similar fluctuations in energy and relaxation lifetimes in surface-hopping dynamics in both TD-DFT and experimentally validated CASPT2 methods. This finding calls for a systematic comparison of the ES potential energy surfaces of DNA and RNA nucleosides at the single- and multi-reference levels of theory. The anomalous long excited state lifetime at the TD-DFT level is explained byn π * trapping due to the tendency of TD-DFT in QM/MM schemes with electrostatic embedding to underestimate the energy of theπ π * state leading to a wrongπ π * / n π * energetic order. A study of the FC energetics suggests that improving the description of the surrounding environment through polarizable embedding or by the expansion of QM layer with hydrogen-bonded waters helps restore the correct state order at TD-DFT level. Thus by combining TDDFT with an accurate modeling of the environment, TD-DFT is positioned as the standout protocol to model photoinduced dynamics in DNA-based aggregates and multimers.
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Affiliation(s)
- Vishal Kumar Jaiswal
- Dipartimento di Chimica Industriale, Università degli Studi di Bologna, Bologna, Italy
| | - Mario Taddei
- Dipartimento di Chimica Industriale, Università degli Studi di Bologna, Bologna, Italy
| | | | - Marco Garavelli
- Dipartimento di Chimica Industriale, Università degli Studi di Bologna, Bologna, Italy
| | - Irene Conti
- Dipartimento di Chimica Industriale, Università degli Studi di Bologna, Bologna, Italy
| | - Artur Nenov
- Dipartimento di Chimica Industriale, Università degli Studi di Bologna, Bologna, Italy
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36
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Giussani A, Worth GA. A First Proposal on the Nitrobenzene Photorelease Mechanism of NO 2 and Its Relation to NO Formation through a Roaming Mechanism. J Phys Chem Lett 2024; 15:2216-2221. [PMID: 38373198 PMCID: PMC10910573 DOI: 10.1021/acs.jpclett.3c03457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2023] [Revised: 02/13/2024] [Accepted: 02/14/2024] [Indexed: 02/21/2024]
Abstract
Despite the fact that NO2 is considered to be the main photoproduct of nitrobenzene photochemistry, no mechanism has ever been proposed to rationalize its formation. NO photorelease is instead a more studied process, probably due to its application in the drug delivery sector and the study of roaming mechanisms. In this contribution, a photoinduced mechanism accounting for the formation of NO2 in nitrobenzene is theorized based on CASPT2, CASSCF, and DFT electronic structure calculations and CASSCF classical dynamics. A triplet nπ* state is shown to evolve toward C-NO2 dissociation, being, in fact, the only low-lying excited state favoring such a deformation. Along the triplet dissociation path, the possibility to decay to the singlet ground state results in the frustration of the dissociation and in the recombination of the fragments, either back to the nitro or the nitrite isomer. The thermal decomposition of the latter to NO constitutes globally a roaming mechanism of NO formation.
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Affiliation(s)
- Angelo Giussani
- Instituto
de Ciencia Molecular, Universitat de València, Apartado 22085, ES-46071 Valencia, Spain
| | - Graham A. Worth
- Department
of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, U.K.
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37
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Wood SA, Esselman BJ, Kougias SM, Woods RC, McMahon RJ. Photoisomerization of (Cyanomethylene)cyclopropane (C 5H 5N) to 1-Cyano-2-methylenecyclopropane in an Argon Matrix. J Phys Chem A 2024; 128:1417-1426. [PMID: 38329215 DOI: 10.1021/acs.jpca.3c08001] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2024]
Abstract
Broad-band ultraviolet photolysis (λ > 200 nm) of (cyanomethylene)cyclopropane (5) in an argon matrix at 20 K generates 1-cyano-2-methylenecyclopropane (7), a previously unknown compound. This product was initially identified by comparison of its infrared spectrum to that predicted by an anharmonic MP2/6-311+G(2d,p) calculation. This assignment was unambiguously confirmed by the synthesis of 1-cyano-2-methylenecyclopropane (7) and observation of its authentic infrared spectrum, which proved identical to that of the observed photoproduct. We investigated the singlet and triplet potential energy surfaces associated with this isomerization process using density functional theory and multireference calculations. The observed rearrangement of compound 5 to compound 7 is computed to be endothermic (3.3 kcal/mol). We were unable to observe the reverse reaction (7 → 5) under the photochemical conditions.
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Affiliation(s)
- Samuel A Wood
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Brian J Esselman
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Samuel M Kougias
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - R Claude Woods
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Robert J McMahon
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
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38
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Fransén L, Tran T, Nandi S, Vacher M. Dissociation and Isomerization Following Ionization of Ethylene: Insights from Nonadiabatic Dynamics Simulations. J Phys Chem A 2024; 128:1457-1465. [PMID: 38358308 PMCID: PMC10911106 DOI: 10.1021/acs.jpca.3c06512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 01/31/2024] [Accepted: 02/01/2024] [Indexed: 02/16/2024]
Abstract
Photoionized and electronically excited ethylene C2H4+ can undergo H-loss, H2-loss, and ethylene-ethylidene isomerization, where the latter entails a hydrogen migration. Recent pioneering experiments with few-femtosecond extreme ultraviolet pulses and complementary theoretical studies have shed light on the photodynamics of this prototypical organic cation. However, no theoretical investigation based on dynamics simulations reported to date has described the mechanisms and time scales of dissociation and isomerization. Herein, we simulate the coupled electron-nuclear dynamics of ethylene following vertical ionization and electronic excitation to its four lowest-lying cationic states. The electronic structure is treated at the CASSCF level, with an active space large enough to describe bond breaking and formation. The simulations indicate that dissociation and isomerization take place mainly on the cationic ground state and allow the probing of previous hypotheses concerning the correlation between the photochemical outcome and the traversed conical intersections. The results, moreover, support the long-standing view that H2-loss may occur from the ethylidene form. However, the ethylene-ethylidene isomerization time predicted by the simulations is considerably longer than those previously inferred from indirect experimental measurements.
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Affiliation(s)
- Lina Fransén
- Nantes
Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Thierry Tran
- Nantes
Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Saikat Nandi
- Université
de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière
Matière, F-69622 Villeurbanne, France
| | - Morgane Vacher
- Nantes
Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
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39
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Zhou JG, Shu Y, Wang Y, Leszczynski J, Prezhdo O. Dissociation Time, Quantum Yield, and Dynamic Reaction Pathways in the Thermolysis of trans-3,4-Dimethyl-1,2-dioxetane. J Phys Chem Lett 2024; 15:1846-1855. [PMID: 38334951 PMCID: PMC10895692 DOI: 10.1021/acs.jpclett.3c03578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 01/26/2024] [Accepted: 02/06/2024] [Indexed: 02/10/2024]
Abstract
The thermolysis of trans-3,4-dimethyl-1,2-dioxetane is studied by trajectory surface hopping. The significant difference between long and short dissociation times is rationalized by frustrated dissociations and the time spent in triplet states. If the C-C bond breaks through an excited state channel, then the trajectory passes over a ridge of the potential energy surface of that state. The calculated triplet quantum yields match the experimental results. The dissociation half-times and quantum yields follow the same ascending order as per the product states, justifying the conjecture that the longer dissociation time leads to a higher quantum yield, proposed in the context of the methylation effect. The populations of the molecular Coulomb Hamiltonian and diagonal states reach equilibrium, but the triplet populations with different Sz components fluctuate indefinitely. Certain initial velocities, leading the trajectories to given product states, can be identified as the most characteristic features for sorting trajectories according to their product states.
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Affiliation(s)
- Jian-Ge Zhou
- Interdisciplinary
Nanotoxicity Center, Department of Chemistry, Physics and Atmospheric
Sciences, Jackson State University, Jackson, Mississippi 39217, United States
| | - Yinan Shu
- Department
of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Yuchen Wang
- Department
of Chemistry and James Franck Institute, The University of Chicago, Chicago, Illinois 60637, United States
| | - Jerzy Leszczynski
- Interdisciplinary
Nanotoxicity Center, Department of Chemistry, Physics and Atmospheric
Sciences, Jackson State University, Jackson, Mississippi 39217, United States
| | - Oleg Prezhdo
- Department
of Chemistry and Department of Physics and Astronomy, University of Southern California, Los Angeles, California 90089, United States
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40
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Sousa C, Bagus PS, Illas F. Theoretical Prediction of Core-Level Binding Energies: Analysis of Unexpected Errors. J Phys Chem A 2024; 128:895-901. [PMID: 38271996 PMCID: PMC10860126 DOI: 10.1021/acs.jpca.3c07567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 01/04/2024] [Accepted: 01/05/2024] [Indexed: 01/27/2024]
Abstract
The analysis of the C(1s) and O(1s) core-level binding energies (CLBEs) of selected molecules computed by means of total energy Hartree-Fock (ΔSCF-HF) differences shows that in some cases, the calculated values for the C(1s) are larger than the experiment, which is unexpected. The origin of these unexpected errors of the Hartree-Fock ΔSCF BEs is shown to arise from static, nondynamical, electron correlation effects which are larger for the ion than for the neutral system. Once these static correlation effects are included by using complete active space self-consistent field (CASSCF) wave functions that include internal correlation terms, the resulting ΔSCF BEs are, as expected, smaller than measured values.
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Affiliation(s)
- Carmen Sousa
- Departament
de Ciència de Materials i Química Física &
Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona, C/Martí i Franquès 1, Barcelona 08028, Spain
| | - Paul S. Bagus
- Department
of Chemistry, University of North Texas, Denton, Texas 76203-5017, United
States
| | - Francesc Illas
- Departament
de Ciència de Materials i Química Física &
Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona, C/Martí i Franquès 1, Barcelona 08028, Spain
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41
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Papineau TV, Jacquemin D, Vacher M. Which Electronic Structure Method to Choose in Trajectory Surface Hopping Dynamics Simulations? Azomethane as a Case Study. J Phys Chem Lett 2024; 15:636-643. [PMID: 38205955 DOI: 10.1021/acs.jpclett.3c03014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
Nonadiabatic dynamics simulations have become a standard approach to explore photochemical reactions. Such simulations require underlying potential energy surfaces and couplings between them, calculated at a chosen level of theory, yet this aspect is rarely assessed. Here, in combination with the popular trajectory surface hopping dynamics method, we use a high-accuracy XMS-CASPT2 electronic structure level as a benchmark for assessing the performances of various post-Hartree-Fock methods (namely, CIS, ADC(2), CC2, and CASSCF) and exchange-correlation functionals (PBE, PBE0, and CAM-B3LYP) in a TD-DFT/TDA context, using the isomerization around a double bond as test case. Different relaxation pathways are identified, and the ability of the different methods to reproduce their relative importance and time scale is discussed. The results show that multireference electronic structure methods should be preferred, when studying nonadiabatic decay between excited and ground states. If not affordable, TD-DFT with TDA and hybrid functionals and ADC(2) are efficient alternatives but overestimate the nonradiative decay yield and thus may miss deexcitation pathways.
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Affiliation(s)
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
- Institut Universitaire de France (IUF), Paris F-75005, France
| | - Morgane Vacher
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
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42
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Safari AA, Anderson RJ, Manni GL. Toward a Stochastic Complete Active Space Second-Order Perturbation Theory. J Phys Chem A 2024; 128:281-291. [PMID: 38154124 PMCID: PMC10788896 DOI: 10.1021/acs.jpca.3c05109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 11/14/2023] [Accepted: 11/14/2023] [Indexed: 12/30/2023]
Abstract
In this work, an internally contracted stochastic complete active space second-order perturbation theory, stochastic-CASPT2, is reported. The method relies on stochastically sampled reduced density matrices (RDMs) up to rank four and contractions thereof with the generalized Fock matrix. A new protocol for calculating higher-order RDMs in full configuration interaction quantum Monte Carlo (FCIQMC) has been designed based on (1) restricting sampling of the corresponding excitations to a deterministic subspace, (2) averaging the RDMs from independent dynamics and (3) projecting them onto the closest positive semi-definite matrix. Our protocol avoids previously encountered numerical conditioning problems in the orthogonalization of the perturber overlap matrix stemming from numerical noise. The chromium dimer CASSCF(12,12)/CASPT2 binding curve is computed as a proof of concept.
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Affiliation(s)
- Arta A. Safari
- Max-Planck-Institute for Solid State
Research, 70569 Stuttgart, Germany
| | | | - Giovanni Li Manni
- Max-Planck-Institute for Solid State
Research, 70569 Stuttgart, Germany
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43
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Cabral Tenorio BN, Pedersen J, Barbatti M, Decleva P, Coriani S. Auger-Meitner and X-ray Absorption Spectra of Ethylene Cation: Insight into Conical Intersection Dynamics. J Phys Chem A 2024; 128:107-117. [PMID: 38134450 DOI: 10.1021/acs.jpca.3c06386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2023]
Abstract
We present a theoretical investigation of the near-edge X-ray absorption fine structure and the Auger-Meitner decay spectra of ethylene and its cation. Herein, we demonstrate that our method, coupled with the nuclear ensemble approach, successfully reproduces the natural bandwidth structure of the experimental resonant Auger-Meitner decay spectra of ethylene, which is not very well reproduced within the Franck-Condon approximation. Furthermore, we analyze the Auger-Meitner decay spectra of the ethylene cation in light of minimum energy conical intersection structures involving the two lowest cationic states (D1 and D0), providing valuable insights into the ultrafast D1/D0 relaxation dynamics. Our results suggest that Auger-Meitner electron spectroscopy can help elucidate the mechanism behind the initial 20 fs of the relaxation dynamics.
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Affiliation(s)
- Bruno Nunes Cabral Tenorio
- DTU Chemistry─Department of Chemistry, Technical University of Denmark, Kemitorvet Bldg 207, DK-2800 Kongens Lyngby, Denmark
- Departamento de Química, Universidad Autónoma de Madrid and Instituto Madrileño de Estudios Avanzados en Nanociencia (IMDEA-Nanociencia), 28049 Madrid, Spain
| | - Jacob Pedersen
- DTU Chemistry─Department of Chemistry, Technical University of Denmark, Kemitorvet Bldg 207, DK-2800 Kongens Lyngby, Denmark
- Department of Chemistry, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Mario Barbatti
- Aix Marseille University, CNRS, ICR, 13397 Marseille, France
- Institut Universitaire de France, 75231 Paris, France
| | - Piero Decleva
- Istituto Officina dei Materiali IOM-CNR and Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, I-34121 Trieste, Italy
| | - Sonia Coriani
- DTU Chemistry─Department of Chemistry, Technical University of Denmark, Kemitorvet Bldg 207, DK-2800 Kongens Lyngby, Denmark
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44
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Segatta F, Aranda D, Aleotti F, Montorsi F, Mukamel S, Garavelli M, Santoro F, Nenov A. Time-Resolved X-ray Absorption Spectroscopy: An MCTDH Quantum Dynamics Protocol. J Chem Theory Comput 2024; 20:307-322. [PMID: 38101807 PMCID: PMC10782456 DOI: 10.1021/acs.jctc.3c00953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 11/04/2023] [Accepted: 11/09/2023] [Indexed: 12/17/2023]
Abstract
Expressions for linear and nonlinear spectroscopy simulation in the X-ray window in which the time evolution of a photoexcited molecular system is treated via quantum dynamics are derived. By leveraging on the peculiar properties of core-excited/ionized states, first- and third-order response functions are recast in the limit of time-scale separation between the extremely short core-state lifetime and the (comparably longer) electronic-state transfer and nuclear vibrational motion. This work is a natural extension of Segatta et al. (J. Chem. Theory Comput. 2023, 19, 2075-2091), in which some of the present authors coupled MCTDH quantum dynamics to spectroscopy simulation at different levels of sophistication. Full quantum dynamics and approximate expressions are compared by simulating X-ray transient absorption spectroscopy at the carbon K-edge in the pyrene molecule.
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Affiliation(s)
- Francesco Segatta
- Dipartimento
di Chimica Industriale “Toso Montanari”, University of Bologna, Viale del Risorgimento, 4, 40136 Bologna, Italy
| | - Daniel Aranda
- ICMol, Universidad de Valencia, c/Catedrático José
Beltrán,
2, 46980 Paterna, Spain
- Istituto
di Chimica dei Composti Organometallici (ICCOM-CNR), Area della Ricerca del CNR, Via
Moruzzi 1, I-56124 Pisa, Italy
| | - Flavia Aleotti
- Dipartimento
di Chimica Industriale “Toso Montanari”, University of Bologna, Viale del Risorgimento, 4, 40136 Bologna, Italy
| | - Francesco Montorsi
- Dipartimento
di Chimica Industriale “Toso Montanari”, University of Bologna, Viale del Risorgimento, 4, 40136 Bologna, Italy
| | - Shaul Mukamel
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, 92697 California, United States
| | - Marco Garavelli
- Dipartimento
di Chimica Industriale “Toso Montanari”, University of Bologna, Viale del Risorgimento, 4, 40136 Bologna, Italy
| | - Fabrizio Santoro
- Istituto
di Chimica dei Composti Organometallici (ICCOM-CNR), Area della Ricerca del CNR, Via
Moruzzi 1, I-56124 Pisa, Italy
| | - Artur Nenov
- Dipartimento
di Chimica Industriale “Toso Montanari”, University of Bologna, Viale del Risorgimento, 4, 40136 Bologna, Italy
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45
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Mlakić M, Perinić H, Vušak V, Horváth O, Sampedro D, Losantos R, Odak I, Škorić I. Photochemical Transformations of Diverse Biologically Active Resveratrol Analogs in Batch and Flow Reactors. Molecules 2023; 29:201. [PMID: 38202784 PMCID: PMC10781098 DOI: 10.3390/molecules29010201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 12/22/2023] [Accepted: 12/27/2023] [Indexed: 01/12/2024] Open
Abstract
Previous biological tests have shown that some resveratrol analogs exhibited significant antioxidative and cholinesterase inhibitory potential, as evidenced by lower IC50 values compared to the established standards, resveratrol and galantamine, respectively. Photochemical transformations were made in parallel on these compounds in the presence of porphyrin photocatalysts in batch and microreactor, showing the significant advantage of flow photochemistry concerning productivity, selectivity, and yields. In this research, the products of photocatalysis and direct irradiation (photolysis) of resveratrol analogs were compared to elucidate how the types and ratios of the products depend on the excitation energy, to reveal the effects of the substituent on the photoinduced reactions and to rationalize experimentally and computationally the nature and ratio of the obtained products. Thus, two main paths were computed in agreement with the experimental results: isomerization with the participation of triplet state intermediates to yield the experimentally detected cis-isomers and subsequent cyclization following a pathway not available for the trans-isomers. The investigation of five model compounds confirmed the advantages of the flow photoreactor in the photochemical reactions of heterocyclic resveratrol analogs.
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Affiliation(s)
- Milena Mlakić
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10 000 Zagreb, Croatia; (M.M.); (H.P.)
| | - Hana Perinić
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10 000 Zagreb, Croatia; (M.M.); (H.P.)
- Pliva R&D, Teva Pharmaceutical Industries Ltd., Prilaz baruna Filipovića 29, HR-10 000 Zagreb, Croatia
| | - Vitomir Vušak
- Pliva R&D, Teva Pharmaceutical Industries Ltd., Prilaz baruna Filipovića 29, HR-10 000 Zagreb, Croatia
| | - Ottó Horváth
- Environmental and Inorganic Photochemistry Research Group, Center for Natural Sciences, Faculty of Engineering, University of Pannonia, P.O. Box 1158, H-8210 Veszprém, Hungary;
| | - Diego Sampedro
- Departamento de Química, Centro de Investigación en Síntesis Química (CISQ), Universidad de La Rioja, 26006 Logroño, Spain; (D.S.); (R.L.)
| | - Raúl Losantos
- Departamento de Química, Centro de Investigación en Síntesis Química (CISQ), Universidad de La Rioja, 26006 Logroño, Spain; (D.S.); (R.L.)
| | - Ilijana Odak
- Department of Chemistry, Faculty of Science and Education, University of Mostar, Matice Hrvatske bb, 88000 Mostar, Bosnia and Herzegovina;
| | - Irena Škorić
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10 000 Zagreb, Croatia; (M.M.); (H.P.)
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46
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Jin PB, Luo QC, Gransbury GK, Vitorica-Yrezabal IJ, Hajdu T, Strashnov I, McInnes EJL, Winpenny REP, Chilton NF, Mills DP, Zheng YZ. Thermally Stable Terbium(II) and Dysprosium(II) Bis-amidinate Complexes. J Am Chem Soc 2023; 145:27993-28009. [PMID: 37997752 PMCID: PMC10755703 DOI: 10.1021/jacs.3c07978] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Revised: 11/08/2023] [Accepted: 11/09/2023] [Indexed: 11/25/2023]
Abstract
The thermostable four-coordinate divalent lanthanide (Ln) bis-amidinate complexes [Ln(Piso)2] (Ln = Tb, Dy; Piso = {(NDipp)2CtBu}, Dipp = C6H3iPr2-2,6) were prepared by the reduction of parent five-coordinate Ln(III) precursors [Ln(Piso)2I] (Ln = Tb, Dy) with KC8; halide abstraction of [Ln(Piso)2I] with [H(SiEt3)2][B(C6F5)] gave the respective Ln(III) complexes [Ln(Piso)2][B(C6F5)]. All complexes were characterized by X-ray diffraction, ICP-MS, elemental analysis, SQUID magnetometry, UV-vis-NIR, ATR-IR, NMR, and EPR spectroscopy and ab initio CASSCF-SO calculations. These data consistently show that [Ln(Piso)2] formally exhibit Ln(II) centers with 4fn5dz21 (Ln = Tb, n = 8; Dy, n = 9) valence electron configurations. We show that simple assignments of the f-d coupling to either L-S or J-s schemes are an oversimplification, especially in the presence of significant crystal field splitting. The coordination geometry of [Ln(Piso)2] is intermediate between square planar and tetrahedral. Projecting from the quaternary carbon atoms of the CN2 ligand backbones shows near-linear C···Ln···C arrangements. This results in strong axial ligand fields to give effective energy barriers to magnetic reversal of 1920(91) K for the Tb(II) analogue and 1964(48) K for Dy(II), the highest values observed for mononuclear Ln(II) single-molecule magnets, eclipsing 1738 K for [Tb(C5iPr5)2]. We tentatively attribute the fast zero-field magnetic relaxation for these complexes at low temperatures to transverse fields, resulting in considerable mixing of mJ states.
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Affiliation(s)
- Peng-Bo Jin
- Frontier
Institute of Science and Technology (FIST), State Key Laboratory of
Electrical Insulation and Power Equipment, MOE Key Laboratory for
Nonequilibrium Synthesis of Condensed Matter, Xi’an Key Laboratory
of Electronic Devices and Materials Chemistry and School of Chemistry, Xi’an Jiaotong University, 99 Yanxiang Road, Xi’an, Shaanxi 710054, P. R. China
| | - Qian-Cheng Luo
- Frontier
Institute of Science and Technology (FIST), State Key Laboratory of
Electrical Insulation and Power Equipment, MOE Key Laboratory for
Nonequilibrium Synthesis of Condensed Matter, Xi’an Key Laboratory
of Electronic Devices and Materials Chemistry and School of Chemistry, Xi’an Jiaotong University, 99 Yanxiang Road, Xi’an, Shaanxi 710054, P. R. China
| | - Gemma K. Gransbury
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | | | - Tomáš Hajdu
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
- Photon
Science Institute, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Ilya Strashnov
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Eric J. L. McInnes
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
- Photon
Science Institute, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Richard E. P. Winpenny
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Nicholas F. Chilton
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - David P. Mills
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Yan-Zhen Zheng
- Frontier
Institute of Science and Technology (FIST), State Key Laboratory of
Electrical Insulation and Power Equipment, MOE Key Laboratory for
Nonequilibrium Synthesis of Condensed Matter, Xi’an Key Laboratory
of Electronic Devices and Materials Chemistry and School of Chemistry, Xi’an Jiaotong University, 99 Yanxiang Road, Xi’an, Shaanxi 710054, P. R. China
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47
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Weser O, Alavi A, Manni GL. Exploiting Locality in Full Configuration Interaction Quantum Monte Carlo for Fast Excitation Generation. J Chem Theory Comput 2023; 19:9118-9135. [PMID: 38051202 PMCID: PMC10753814 DOI: 10.1021/acs.jctc.3c00546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 10/18/2023] [Accepted: 10/24/2023] [Indexed: 12/07/2023]
Abstract
In this paper, we propose an improved excitation generation algorithm for the full configuration interaction quantum Monte Carlo method, which is particularly effective in systems described by localized orbitals. The method is an extension of the precomputed heat-bath strategy of Holmes et al., with more effective sampling of double excitations and a novel approach for nonuniform sampling of single excitations. We demonstrate the effectiveness of the algorithm for a chain of 30 hydrogen atoms with atom-localized orbitals, a stack of benzene molecules, and an Fe(II)-porphyrin model complex, whereby we show an overall efficiency gain by a factor of two to four, as measured by variance reduction per wall-clock time.
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Affiliation(s)
- Oskar Weser
- Max-Planck-Institute
for Solid State Research, Stuttgart 70569, Germany
| | - Ali Alavi
- Max-Planck-Institute
for Solid State Research, Stuttgart 70569, Germany
- Yusuf
Hamied Department of Chemistry, University
of Cambridge, Lensfield
Road, Cambridge CB2 1EW, U.K.
| | - Giovanni Li Manni
- Max-Planck-Institute
for Solid State Research, Stuttgart 70569, Germany
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48
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López X, Sánchez-Mansilla A, Sousa C, Straatsma TP, Broer R, de Graaf C. Comparison of Computational Strategies for the Calculation of the Electronic Coupling in Intermolecular Energy and Electron Transport Processes. J Phys Chem A 2023; 127:10717-10731. [PMID: 38084088 PMCID: PMC10749449 DOI: 10.1021/acs.jpca.3c05998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 11/29/2023] [Accepted: 11/29/2023] [Indexed: 12/22/2023]
Abstract
Electronic couplings in intermolecular electron and energy transfer processes calculated by six different existing computational techniques are compared to nonorthogonal configuration interaction for fragments (NOCI-F) results. The paper addresses the calculation of the electronic coupling in diketopyrrolopyrol, tetracene, 5,5'-difluoroindigo, and benzene-Cl for hole and electron transport, as well as the local exciton and singlet fission coupling. NOCI-F provides a rigorous computational scheme to calculate these couplings, but its computational cost is rather elevated. The here-considered ab initio Frenkel-Davydov (AIFD), Dimer projection (DIPRO), transition dipole moment coupling, Michl-Smith, effective Hamiltonian, and Mulliken-Hush approaches are computationally less demanding, and the comparison with the NOCI-F results shows that the NOCI-F results in the couplings for hole and electron transport are rather accurately predicted by the more approximate schemes but that the NOCI-F exciton transfer and singlet fission couplings are more difficult to reproduce.
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Affiliation(s)
- Xavier López
- Departament
de Química Física i Inorgànica, Universitat Rovira i Virgili, C. Marcel·lí Domingo 1, 43007 Tarragona, Spain
| | - Aitor Sánchez-Mansilla
- Departament
de Química Física i Inorgànica, Universitat Rovira i Virgili, C. Marcel·lí Domingo 1, 43007 Tarragona, Spain
| | - Carmen Sousa
- Departament
de Ciència de Materials i Química Física and
Institut de Química Teòrica i Computacional, Universitat de Barcelona, C. Martí i Franquès, 08028 Barcelona, Spain
| | - Tjerk P. Straatsma
- National
Center for Computational Sciences, Oak Ridge
National Laboratory, Oak Ridge, Tennessee 37831-6373, United States
- Department
of Chemistry and Biochemistry, University
of Alabama, Tuscaloosa, Alabama 35487-0336, United States
| | - Ria Broer
- Zernike
Institute of Advanced Materials, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, Netherlands
| | - Coen de Graaf
- Departament
de Química Física i Inorgànica, Universitat Rovira i Virgili, C. Marcel·lí Domingo 1, 43007 Tarragona, Spain
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
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49
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Bezabih MS, Kaliakin DS, Blanco-González A, Barneschi L, Tarnovsky AN, Olivucci M. Comparative Study of Uracil Excited-State Photophysics in Water and Acetonitrile via RMS-CASPT2-Driven Quantum-Classical Trajectories. J Phys Chem B 2023; 127:10871-10879. [PMID: 38055701 DOI: 10.1021/acs.jpcb.3c06433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023]
Abstract
We present a nonadiabatic molecular dynamics study of the ultrafast processes occurring in uracil upon UV light absorption, leading to electronic excitation and subsequent nonradiative decay. Previous studies have indicated that the mechanistic details of this process are drastically different depending on whether the process takes place in the gas phase, acetonitrile, or water. However, such results have been produced using quantum chemical methods that did not incorporate both static and dynamic electron correlation. In order to assess the previously proposed mechanisms, we simulate the photodynamics of uracil in the three environments mentioned above using quantum-classical trajectories and, for solvated uracil, hybrid quantum mechanics/molecular mechanics (QM/MM) models driven by the rotated multistate complete active space second-order perturbation (RMS-CASPT2) method. To do so, we exploit the gradient recently made available in OpenMolcas and compare the results to those obtained using the complete active space self-consistent field (CASSCF) method only accounting for static electron correlation. We show that RMS-CASPT2 produces, in general, a mechanistic picture different from the one obtained at the CASSCF level but confirms the hypothesis advanced on the basis of previous ROKS and TDDFT studies thus highlighting the importance of incorporating dynamic electron correlation in the investigation of ultrafast electronic deactivation processes.
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Affiliation(s)
- Meseret Simachew Bezabih
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Danil S Kaliakin
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | | | - Leonardo Barneschi
- Dipartimento di Biotechnologie, Chimica e Farmacia, Università di Siena, I-53100 Siena, Italy
| | - Alexander N Tarnovsky
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Massimo Olivucci
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
- Dipartimento di Biotechnologie, Chimica e Farmacia, Università di Siena, I-53100 Siena, Italy
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50
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Sousa C, Sánchez-Mansilla A, Broer R, Straatsma TP, de Graaf C. A Nonorthogonal Configuration Interaction Approach to Singlet Fission in Perylenediimide Compounds. J Phys Chem A 2023; 127:9944-9958. [PMID: 37964533 PMCID: PMC10694806 DOI: 10.1021/acs.jpca.3c04975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 10/07/2023] [Accepted: 10/31/2023] [Indexed: 11/16/2023]
Abstract
Perylenediimide molecules constitute a family of chromophores that undergo singlet fission, a process in which an excited singlet state converts into lower energy triplets on two neighboring molecules, potentially increasing the efficiency of organic solar cells. Here, the nonorthogonal configuration interaction method is applied to study the effect of the different crystal packing of various perylenediimide derivatives on the relative energies of the singlet and triplet states, the intermolecular electronic couplings, and the relative rates for singlet fission. The analysis of the wave functions and electronic couplings reveals that charge transfer states play an important role in the singlet fission mechanism. Dimer conformations where the PDI molecules are at large displacements along the long axis and short on the short axis are posed as the most favorable for singlet fission. The role of the substituent at the imide group has been inspected concluding that, although it has no effect in the energies, for some conformations it significantly influences the electronic couplings, and therefore, replacing this substituent with hydrogen may introduce artifacts in the computational modeling of the PDI molecules.
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Affiliation(s)
- C. Sousa
- Departament
de Ciència de Materials i Química Física and
Institut de Química Teòrica i Computacional, Universitat de Barcelona, 08028 Barcelona, Spain
| | - A. Sánchez-Mansilla
- Departament
de Química Física i Inorgànica, Universitat Rovira i Virgili, 43007 Tarragona, Spain
| | - R. Broer
- Zernike
Institute of Advanced Materials, University
of Groningen, 9747 AG Groningen, The Netherlands
| | - T. P. Straatsma
- National
Center for Computational Sciences, Oak Ridge
National Laboratory, Oak Ridge, Tennessee 37831-6373, United States
- Department
of Chemistry and Biochemistry, University
of Alabama, Tuscaloosa, Alabama 35487-0336, United States
| | - C. de Graaf
- Departament
de Química Física i Inorgànica, Universitat Rovira i Virgili, 43007 Tarragona, Spain
- ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
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