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Borsley S, Leigh DA, Roberts BMW. Molecular Ratchets and Kinetic Asymmetry: Giving Chemistry Direction. Angew Chem Int Ed Engl 2024; 63:e202400495. [PMID: 38568047 DOI: 10.1002/anie.202400495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Indexed: 05/03/2024]
Abstract
Over the last two decades ratchet mechanisms have transformed the understanding and design of stochastic molecular systems-biological, chemical and physical-in a move away from the mechanical macroscopic analogies that dominated thinking regarding molecular dynamics in the 1990s and early 2000s (e.g. pistons, springs, etc), to the more scale-relevant concepts that underpin out-of-equilibrium research in the molecular sciences today. Ratcheting has established molecular nanotechnology as a research frontier for energy transduction and metabolism, and has enabled the reverse engineering of biomolecular machinery, delivering insights into how molecules 'walk' and track-based synthesisers operate, how the acceleration of chemical reactions enables energy to be transduced by catalysts (both motor proteins and synthetic catalysts), and how dynamic systems can be driven away from equilibrium through catalysis. The recognition of molecular ratchet mechanisms in biology, and their invention in synthetic systems, is proving significant in areas as diverse as supramolecular chemistry, systems chemistry, dynamic covalent chemistry, DNA nanotechnology, polymer and materials science, molecular biology, heterogeneous catalysis, endergonic synthesis, the origin of life, and many other branches of chemical science. Put simply, ratchet mechanisms give chemistry direction. Kinetic asymmetry, the key feature of ratcheting, is the dynamic counterpart of structural asymmetry (i.e. chirality). Given the ubiquity of ratchet mechanisms in endergonic chemical processes in biology, and their significance for behaviour and function from systems to synthesis, it is surely just as fundamentally important. This Review charts the recognition, invention and development of molecular ratchets, focussing particularly on the role for which they were originally envisaged in chemistry, as design elements for molecular machinery. Different kinetically asymmetric systems are compared, and the consequences of their dynamic behaviour discussed. These archetypal examples demonstrate how chemical systems can be driven inexorably away from equilibrium, rather than relax towards it.
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Affiliation(s)
- Stefan Borsley
- Department of Chemistry, The University of Manchester, Oxford Road, M13 9PL, Manchester, United Kingdom
| | - David A Leigh
- Department of Chemistry, The University of Manchester, Oxford Road, M13 9PL, Manchester, United Kingdom
| | - Benjamin M W Roberts
- Department of Chemistry, The University of Manchester, Oxford Road, M13 9PL, Manchester, United Kingdom
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2
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Shi W, Ma J, Jiang C, Taketsugu T. Advanced theoretical design of light-driven molecular rotary motors: enhancing thermal helix inversion and visible-light activation. Phys Chem Chem Phys 2024; 26:15672-15680. [PMID: 38766713 DOI: 10.1039/d4cp00037d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
Abstract
In this study, we have advanced the field of light-driven molecular rotary motors (LDMRMs) by achieving two pivotal goals: lowering the thermal helix inversion (THI) barrier and extending the absorption wavelength into the visible spectrum. This study involves the structural reengineering of a second-generation visible LDMRM, resulting in the synthesis of a novel class, specifically, 2-((2S)-5-methoxy-2-methyl-2,3-dihydro-1H-cyclopenta[a]naphthalen-1-yl)-3-oxo-2,3-dihydro-1H-dibenzo[e,g]indole-6,9-dicarbonitrile. This redesigned motor stands out with its two photoisomerization stages and two thermal helix inversions, featuring exceptionally low THI barriers (4.00 and 2.05 kcal mol-1 at the OM2/MRCI level for the EM → EP and ZM → ZP processes, respectively). Moreover, it displays absorption wavelengths in the visible light range (482.98 and 465.76 nm for the EP and ZP isomers, respectively, at the TD-PBE0-D3/6-31G(d,p) level), surpassing its predecessors in efficiency, as indicated by the narrow HOMO-LUMO energy gap. Ultrafast photoisomerization kinetics (approximately 0.8-1.6 ps) and high quantum yields (around 0.3-0.6) were observed through trajectory surface hopping simulations. Additionally, the simulated time-resolved fluorescence emission spectrum indicates a significantly reduced "dark state" duration (0.09-0.26 ps) in these newly designed LDMRMs compared to the original ones, marking a substantial leap forward in the design and efficiency of LDMRMs.
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Affiliation(s)
- Weiliang Shi
- Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo 060-0810, Japan
| | - Jianzheng Ma
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xi'an 710049, China.
| | - Chenwei Jiang
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xi'an 710049, China.
| | - Tetsuya Taketsugu
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan.
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan
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3
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Roy P, Sardjan AS, Browne WR, Feringa BL, Meech SR. Excited State Dynamics in Unidirectional Photochemical Molecular Motors. J Am Chem Soc 2024; 146:12255-12270. [PMID: 38656968 PMCID: PMC11082934 DOI: 10.1021/jacs.4c01019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 04/05/2024] [Accepted: 04/08/2024] [Indexed: 04/26/2024]
Abstract
Unidirectional photochemically driven molecular motors (PMMs) convert the energy of absorbed light into continuous rotational motion. As such they are key components in the design of molecular machines. The prototypical and most widely employed class of PMMs is the overcrowded alkenes, where rotational motion is driven by successive photoisomerization and thermal helix inversion steps. The efficiency of such PMMs depends upon the speed of rotation, determined by the rate of ground state thermal helix inversion, and the quantum yield of photoisomerization, which is dependent on the excited state energy landscape. The former has been optimized by synthetic modification across three generations of overcrowded alkene PMMs. These improvements have often been at the expense of photoisomerization yield, where there remains room for improvement. In this perspective we review the application of ultrafast spectroscopy to characterize the excited state dynamics in PMMs. These measurements lead to a general mechanism for all generations of PMMs, involving subpicosecond decay of a Franck-Condon excited state to populate a dark excited state which decays within picoseconds via conical intersections with the electronic ground state. The model is discussed in the context of excited state dynamics calculations. Studies of PMM photochemical dynamics as a function of solvent suggest exploitation of intramolecular charge transfer and solvent polarity as a route to controlling photoisomerization yield. A test of these ideas for a first generation motor reveals a high degree of solvent control over isomerization yield. These results suggest a pathway to fine control over the performance of future PMMs.
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Affiliation(s)
- Palas Roy
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.
- School
of Basic Sciences, Indian Institute of Technology
Bhubaneswar, Bhubaneswar, Odisha 752050, India
| | - Andy S. Sardjan
- Molecular
Inorganic Chemistry, Stratingh Institute for Chemistry, University of Groningen, 9747AG Groningen, The Netherlands
| | - Wesley R. Browne
- Molecular
Inorganic Chemistry, Stratingh Institute for Chemistry, University of Groningen, 9747AG Groningen, The Netherlands
| | - Ben L. Feringa
- Centre
for Systems Chemistry, Stratingh Institute for Chemistry, University of Groningen, 9747AG Groningen, The Netherlands
| | - Stephen R. Meech
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.
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4
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Xu C, Lin C, Peng J, Zhang J, Lin S, Gu FL, Gelin MF, Lan Z. On-the-fly simulation of time-resolved fluorescence spectra and anisotropy. J Chem Phys 2024; 160:104109. [PMID: 38477337 DOI: 10.1063/5.0201204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 02/23/2024] [Indexed: 03/14/2024] Open
Abstract
We combine on-the-fly trajectory surface hopping simulations and the doorway-window representation of nonlinear optical response functions to create an efficient protocol for the evaluation of time- and frequency-resolved fluorescence (TFRF) spectra and anisotropies of the realistic polyatomic systems. This approach gives the effective description of the proper (e.g., experimental) pulse envelopes, laser field polarizations, and the proper orientational averaging of TFRF signals directly from the well-established on-the-fly nonadiabatic dynamic simulations without extra computational cost. To discuss the implementation details of the developed protocol, we chose cis-azobenzene as a prototype to simulate the time evolution of the TFRF spectra governed by its nonadiabatic dynamics. The results show that the TFRF is determined by the interplay of several key factors, i.e., decays of excited-state populations, evolution of the transition dipole moments along with the dynamic propagation, and scaling factor of the TFRF signals associated with the cube of emission frequency. This work not only provides an efficient and effective approach to simulate the TFRF and anisotropies of realistic polyatomic systems but also discusses the important relationship between the TFRF signals and the underlining nonadiabatic dynamics.
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Affiliation(s)
- Chao Xu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
| | - Congru Lin
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
| | - Jiawei Peng
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
| | - Juanjuan Zhang
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
| | - Shichen Lin
- Interdisciplinary Graduate School of Engineering Sciences, Kyushu University, 6-1 Kasuga-Park, Fukuoka 816-8580, Japan
| | - Feng Long Gu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
| | - Maxim F Gelin
- School of Science, Hangzhou Dianzi University, Hangzhou 310018, People's Republic of China
| | - Zhenggang Lan
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education and Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety; School of Environment, South China Normal University, Guangzhou 510006, People's Republic of China
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5
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Xu W, Tao Y, Xu H, Wen J. Theoretical trends in the dynamics simulations of molecular machines across multiple scales. Phys Chem Chem Phys 2024; 26:4828-4839. [PMID: 38235540 DOI: 10.1039/d3cp05201j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
Abstract
Over the past few decades, molecular machines have been extensively studied, since they are composed of single molecules for functional materials capable of responding to external stimuli, enabling motion at scales ranging from the microscopic to the macroscopic level within molecular aggregates. This advancement holds the potential to efficiently transform external resources into mechanical movement, achieved through precise control of conformational changes in stimuli-responsive materials. However, the underlying mechanism that links microscopic and macroscopic motions remains unclear, demanding computational development associated with simulating the construction of molecular machines from single molecules. This bottleneck has impeded the design of more efficient functional materials. Advancements in theoretical simulations have successfully been developed in various computational models to unveil the operational mechanisms of stimulus-responsive molecular machines, which could help us reduce the costs in experimental trial-and-error procedures. It opens doors to the computer-aided design of innovative functional materials. In this perspective, we have reviewed theoretical approaches employed in simulating dynamic processes involving conformational changes in molecular machines, spanning different scales and environmental conditions. In addition, we have highlighted current challenges and anticipated future trends in the collective control of aggregates within molecular machines. Our goal is to provide a comprehensive overview of recent theoretical advancements in the field of molecular machines, offering valuable insights for the design of novel smart materials.
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Affiliation(s)
- Weijia Xu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China.
| | - Yuanda Tao
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China.
| | - Haoyang Xu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China.
| | - Jin Wen
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China.
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6
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Wen J, Mai S, González L. Excited-State Dynamics Simulations of a Light-Driven Molecular Motor in Solution. J Phys Chem A 2023; 127:9520-9529. [PMID: 37917883 PMCID: PMC10658450 DOI: 10.1021/acs.jpca.3c05841] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 10/14/2023] [Accepted: 10/17/2023] [Indexed: 11/04/2023]
Abstract
Molecular motors, where light can be transformed into motion, are promising in the design of nanomechanical devices. For applications, however, finding relationships between molecular motion and the environment is important. Here, we report the study of excited-state dynamics of an overcrowded alkene in solution using a hybrid quantum mechanics/molecular mechanics (QM/MM) approach combined with excited-state molecular dynamics simulations. Using QM/MM surface-hopping trajectories, we calculated time-resolved emission and transient absorption spectra. These show the rise of a short-lived Franck-Condon state, followed by the formation of a dark state in the first 150 fs before the molecular motor relaxes to the ground state in about 1 ps. From the analysis of radial distribution functions, we infer that the orientation of the solvent with respect to the molecular motor in the electronic excited state is similar to that in the ground state during the photoisomerization.
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Affiliation(s)
- Jin Wen
- State
Key Laboratory for Modification of Chemical Fibers and Polymer Materials,
College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
- Institute
of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 17, Vienna 1090, Austria
| | - Sebastian Mai
- Institute
of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 17, Vienna 1090, Austria
| | - Leticia González
- Institute
of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Str. 17, Vienna 1090, Austria
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7
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Xu H, Zhang B, Tao Y, Xu W, Hu B, Yan F, Wen J. Ultrafast Photocontrolled Rotation in a Molecular Motor Investigated by Machine Learning-Based Nonadiabatic Dynamics Simulations. J Phys Chem A 2023; 127:7682-7693. [PMID: 37672626 DOI: 10.1021/acs.jpca.3c01036] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/08/2023]
Abstract
The thermal helix inversion (THI) of the overcrowded alkene-based molecular motors determines the speed of the unidirectional rotation due to the high reaction barrier in the ground state, in comparison with the ultrafast photoreaction process. Recently, a phosphine-based motor has achieved all-photochemical rotation experimentally, promising to be controlled without a thermal step. However, the mechanism of this photochemical reaction has not yet been fully revealed. The comprehensive computational studies on photoisomerization still resort to nonadiabatic molecular dynamics (NAMD) simulations based on electronic structure calculations, which remains a high computational cost for large systems such as molecular motors. Machine learning (ML) has become an accelerating tool in NAMD simulations recently, where excited-state potential energy surfaces (PESs) are constructed analytically with high accuracy, providing an efficient approach for simulations in photochemistry. Herein the reaction pathway is explored by a spin-flip time-dependent density functional theory (SF-TDDFT) approach in combination with ML-based NAMD simulations. According to our computational simulations, we notice that one of the key factors of fulfilling all-photochemical rotation in the phosphine-based motor is that the excitation energies of four isomers are similar. Additionally, a shortcut photoinduced transformation between unstable isomers replaces the THI step, which shares the conical intersection (CI) with photoisomerization. In this study, we provide a practical approach to speed up the NAMD simulations in photochemical reactions for a large system that could be extended to other complex systems.
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Affiliation(s)
- Haoyang Xu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
| | - Boyuan Zhang
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
| | - Yuanda Tao
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
| | - Weijia Xu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
| | - Bo Hu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
| | - Feng Yan
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
- Jiangsu Engineering Laboratory of Novel Functional Polymeric Materials, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123 China
| | - Jin Wen
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai 201620, China
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8
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Roy P, Sardjan AS, Danowski W, Browne WR, Feringa BL, Meech SR. Control of Photoconversion Yield in Unidirectional Photomolecular Motors by Push-Pull Substituents. J Am Chem Soc 2023; 145:19849-19855. [PMID: 37646616 PMCID: PMC10510317 DOI: 10.1021/jacs.3c06070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Indexed: 09/01/2023]
Abstract
Molecular motors based on the overcrowded alkene motif convert light energy into unidirectional mechanical motion through an excited state isomerization reaction. The realization of experimental control over conversion efficiency in these molecular motors is an important goal. Here, we combine the synthesis of a novel "push-pull" overcrowded alkene motor with photophysical characterization by steady state and ultrafast time-resolved electronic spectroscopy. We show that tuning of the charge transfer character in the excited state has a dramatic effect on the photoisomerization yield, enhancing it to near unity in nonpolar solvents while largely suppressing it in polar solvents. This behavior is explained through reference to solvent- and substituent-dependent potential energy surfaces and their effect on conical intersections to the ground state. These observations offer new routes to the fine control of motor efficiency and introduce additional degrees of freedom in the synthesis and exploitation of light-driven molecular motors.
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Affiliation(s)
- Palas Roy
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.
- School
of Basic Sciences, Indian Institute of Technology
Bhubaneswar, Bhubaneswar, Odisha 752050, India
| | - Andy S. Sardjan
- Molecular
Inorganic Chemistry, Stratingh Institute
for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Wojciech Danowski
- Centre
for Systems Chemistry, Stratingh Institute
for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
- University
of Strasbourg, CNRS, ISIS UMR 7006, 8 allée Gaspard Monge, F-67000 Strasbourg, France
| | - Wesley R. Browne
- Molecular
Inorganic Chemistry, Stratingh Institute
for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Ben L. Feringa
- Centre
for Systems Chemistry, Stratingh Institute
for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Stephen R. Meech
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.
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Ma J, Zhao D, Yu L, Jiang C, Lan Z, Li F. Simultaneously improving the efficiencies of photo- and thermal isomerization of an oxindole-based light-driven molecular rotary motor by a structural redesign. Phys Chem Chem Phys 2023; 25:12800-12809. [PMID: 37129050 DOI: 10.1039/d3cp00559c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
We designed a novel highly efficient light-driven molecular rotary motor theoretically by using electronic structure calculations and nonadiabatic dynamics simulations, and it showed excellent performance for both photo- and thermal isomerization processes simultaneously. By the small structural modification based on 3-(2,7-dimethyl-2,3-dihydro-1H-inden-1-ylidene)-1-methylindolin-2-one (DDIYM) synthesized by Feringa et al. recently, an oxindole-based light-driven molecular rotary motor, 3-(1,5-dimethyl-4,5-dihydrocyclopenta[b]pyrrol-6(1H)-ylidene)-1-methylindolin-2-one (DDPYM), is proposed, which displays a significant electronic push-pull character and weak steric hindrance for double-bond isomerization. The newly designed motor DDPYM shows a remarkable improvement of the quantum yield for both EP → ZM and ZP → EM photoisomerization processes, compared to the original motor DDIYM. Furthermore, the rotary motion in photoisomerization processes of DDPYM behaves more like a pure axial rotational motion approximately, while that of DDIYM is an obvious precessional motion. The weakness of the steric hindrance reduces the energy barriers of the thermal helix EM → EP and ZM → ZP inversion steps, and would accelerate two ground-state isomerization steps significantly. Our results confirm the feasibility of simultaneously improving the efficiencies of photo- and thermal isomerization of oxindole-based light-driven molecular rotary motors and this design idea sheds light on the future development of more efficient molecular motors.
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Affiliation(s)
- Jianzheng Ma
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xian 710049, China.
| | - Di Zhao
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xian 710049, China.
| | - Le Yu
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education, College of Chemistry & Materials Science, Shaanxi Key Laboratory of Physico-Inorganic Chemistry, Northwest University, Xi'an 710127, China
| | - Chenwei Jiang
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xian 710049, China.
| | - Zhenggang Lan
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China; School of Environment, South China Normal University, Guangzhou 510006, China.
| | - Fuli Li
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi'an Jiaotong University, Xian 710049, China.
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10
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Liu L, Fang WH, Martinez TJ. A Nitrogen Out-of-Plane (NOOP) Mechanism for Imine-Based Light-Driven Molecular Motors. J Am Chem Soc 2023; 145:6888-6898. [PMID: 36920260 DOI: 10.1021/jacs.3c00275] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/16/2023]
Abstract
Light-driven molecular motors have generated considerable interest due to their potential applications in material and biological systems. Recently, Greb and Lehn reported a new class of molecular motors, chiral N-alkyl imines, which undergo unidirectional rotation induced by light and heat. The mechanism of unidirectional motion in molecular motors containing a C═N group has been assumed to consist of photoinduced torsion about the double bond. In this work, we present a computational study of the photoisomerization dynamics of a chiral N-alkyl imine motor. We find that the location and energetics of minimal energy conical intersections (MECIs) alone are insufficient to understand the mechanism of the motor. Furthermore, a key part of the mechanism consists of out-of-plane distortions of the N atom (followed by isomerization about the double bond). Dynamic effects and out-of-plane distortions are critical to understand the observed (rather low) quantum yield for photoisomerization. Our results provide hints as to how the photoisomerization quantum yield might be increased, improving the efficiency of this class of molecular motors.
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Affiliation(s)
- Lihong Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China.,Department of Chemistry and PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
| | - Wei-Hai Fang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Todd J Martinez
- Department of Chemistry and PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
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11
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Roy P, Browne WR, Feringa BL, Meech SR. Ultrafast motion in a third generation photomolecular motor. Nat Commun 2023; 14:1253. [PMID: 36878920 PMCID: PMC9988961 DOI: 10.1038/s41467-023-36777-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 02/13/2023] [Indexed: 03/08/2023] Open
Abstract
Controlling molecular translation at the nanoscale is a key objective for development of synthetic molecular machines. Recently developed third generation photochemically driven molecular motors (3GMs), comprising pairs of overcrowded alkenes capable of cooperative unidirectional rotation offer the possibility of converting light energy into translational motion. Further development of 3GMs demands detailed understanding of their excited state dynamics. Here we use time-resolved absorption and emission to track population and coherence dynamics in a 3GM. Femtosecond stimulated Raman reveals real-time structural dynamics as the excited state evolves from a Franck-Condon bright-state through weakly-emissive dark-state to the metastable product, yielding new insight into the reaction coordinate. Solvent polarity modifies the photoconversion efficiency suggesting charge transfer character in the dark-state. The enhanced quantum yield correlates with suppression of a low-frequency flapping motion in the excited state. This detailed characterization facilitates development of 3GMs, suggesting exploitation of medium and substituent effects to modulate motor efficiency.
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Affiliation(s)
- Palas Roy
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, United Kingdom.,School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Argul, Odisha, 752050, India
| | - Wesley R Browne
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands.
| | - Stephen R Meech
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, United Kingdom.
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Pang X, He H, Zhao K, Zhang N, Zhong Q. Ultrafast nonadiabatic photoisomerization dynamics study of molecular motor based on the synthetic indanylidene-ppyrrolinium frameworks. Chem Phys Lett 2023. [DOI: 10.1016/j.cplett.2023.140439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
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13
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Significant impact of deprotonated status on the photoisomerization dynamics of bacteriophytochrome chromophore. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.107850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Ma J, Zhao D, Jiang C, Lan Z, Li F. Effect of Temperature on Photoisomerization Dynamics of a Newly Designed Two-Stroke Light-Driven Molecular Rotary Motor. Int J Mol Sci 2022; 23:ijms23179694. [PMID: 36077091 PMCID: PMC9456002 DOI: 10.3390/ijms23179694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2022] [Revised: 08/20/2022] [Accepted: 08/23/2022] [Indexed: 11/16/2022] Open
Abstract
The working mechanism of conventional light-driven molecular rotary motors, especially Feringa-type motors, contains two photoisomerization steps and two thermal helix inversion steps. Due to the existence of a thermal helix inversion step, both the ability to work at lower temperatures and the rotation speed are limited. In this work, a two-stroke light-driven molecular rotary motor, 2-(1,5-dimethyl-4,5-dihydrocyclopenta[b]pyrrol-6(1H)-ylidene)-1,2-dihydro-3H-pyrrol-3-one (DDPY), is proposed, which is capable of performing unidirectional and repetitive rotation by only two photoisomerization (EP→ZP and ZP→EP) steps. With trajectory surface-hopping simulation at the semi-empirical OM2/MRCI level, the EP→ZP and ZP→EP nonadiabatic dynamics of DDPY were systematically studied at different temperatures. Both EP→ZP and ZP→EP photoisomerizations are on an ultrafast timescale (ca. 200–300 fs). The decay mode of EP→ZP photoisomerization is approximately bi-exponential, while that of ZP→EP photoisomerization is found to be periodic. For EP and ZP isomers of DDPY, after the S0→S1 excitation, the dynamical processes of nonadiabatic decay are both followed by twisting about the central C=C double bond and the pyramidalization of the C atom at the stator-axle linkage. The effect of temperature on the nonadiabatic dynamics of EP→ZP and ZP→EP photoisomerizations of DDPY has been systematically investigated. The average lifetimes of the S1 excited state and quantum yields for both EP→ZP and ZP→EP photoisomerization are almost temperature-independent, while the corresponding unidirectionality of rotation is significantly increased (e.g., 74% for EP→ZP and 72% for ZP→EP at 300 K vs 100% for EP→ZP and 94% for ZP→EP at 50 K) with lowering the temperature.
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Affiliation(s)
- Jianzheng Ma
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Di Zhao
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Chenwei Jiang
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi’an Jiaotong University, Xi’an 710049, China
- Correspondence: (C.J.); (Z.L.)
| | - Zhenggang Lan
- Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, SCNU Environmental Research Institute, School of Environment, South China Normal University, Guangzhou 510006, China
- Correspondence: (C.J.); (Z.L.)
| | - Fuli Li
- Ministry of Education Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, Shaanxi Province Key Laboratory of Quantum Information and Quantum Optoelectronic Devices, School of Physics, Xi’an Jiaotong University, Xi’an 710049, China
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15
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Lee IS, Min SK. Generalized Formulation of the Density Functional Tight Binding-Based Restricted Ensemble Kohn-Sham Method with Onsite Correction to Long-Range Correction. J Chem Theory Comput 2022; 18:3391-3409. [PMID: 35549266 DOI: 10.1021/acs.jctc.2c00037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present a generalized formulation for the combination of the density functional tight binding (DFTB) approach and the state-interaction state-average spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method by considering onsite correction (OC) as well as the long-range corrected (LC) functional. The OC contribution provides more accurate energies and analytic gradients for individual microstates, while the multireference character of the SSR provides the correct description for conical intersections. We benchmark the LC-OC-DFTB/SSR method against various DFTB calculation methods for excitation energies and conical intersection structures with π/π* or n/π* characters. Furthermore, we perform excited-state molecular dynamics simulations with a molecular rotary motor with variations of LC-OC-DFTB/SSR approaches. We show that the OC contribution to the LC functional is crucial to obtain the correct geometry of conical intersections.
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Affiliation(s)
- In Seong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Seung Kyu Min
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
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16
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Design and Nonadiabatic Photoisomerization Dynamics Study of a Three-Stroke Light-Driven Molecular Rotary Motor. Int J Mol Sci 2022; 23:ijms23073908. [PMID: 35409268 PMCID: PMC8999534 DOI: 10.3390/ijms23073908] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Revised: 03/29/2022] [Accepted: 03/30/2022] [Indexed: 01/01/2023] Open
Abstract
Working cycle of conventional light-driven molecular rotary motors (LDMRMs), especially Feringa-type motors, usually have four steps, two photoisomerization steps, and two thermal helix inversion (THI) steps. THI steps hinder the ability of the motor to operate at lower temperatures and limit the rotation speed of LDMRMs. A three-stroke LDMRM, 2-(2,7-dimethyl-2,3-dihydro-1H-inden-1-ylidene)-1,2-dihydro-3H-pyrrol-3-one (DDIY), is proposed, which is capable of completing an unidirectional rotation by two photoisomerization steps and one thermal helix inversion step at room temperature. On the basis of trajectory surface-hopping simulation at the semi-empirical OM2/MRCI level, the EP→ZP and ZP→EM nonadiabatic photoisomerization dynamics of DDIY were systematically analyzed. Quantum yields of EP→ZP and ZP→EM photoisomerization of DDIY are ca. 34% and 18%, respectively. Both EP→ZP and ZP→EM photoisomerization processes occur on an ultrafast time scale (ca. 100-300 fs). This three-stroke LDMRM may stimulate further research for the development of new families of more efficient LDMRMs.
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17
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Xu C, Lin K, Hu D, Gu FL, Gelin MF, Lan Z. Ultrafast Internal Conversion Dynamics through the on-the-Fly Simulation of Transient Absorption Pump-Probe Spectra with Different Electronic Structure Methods. J Phys Chem Lett 2022; 13:661-668. [PMID: 35023755 DOI: 10.1021/acs.jpclett.1c03373] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
An on-the-fly surface-hopping simulation protocol is developed for the evaluation of transient absorption (TA) pump-probe (PP) signals of molecular systems exhibiting internal conversion to the electronic ground state. We study the nonadiabatic dynamics of azomethane and the associating TA PP spectra at three levels of the electronic-structure theory, OM2/MRCI, SA-CASSCF, and XMS-CASPT2. The impact of these methods on the population dynamics and time-resolved TA PP signals is substantially different. This difference is attributed to the strong non-Condon effects that must be taken into account for the proper understanding and interpretation of time-resolved TA PP signals of nonadiabatic polyatomic systems. This shows that the combination of the dynamical and spectral simulations definitely provides more accurate and detailed information on the microscopic mechanisms of photophysical and photochemical processes. Hence the simulation of time-resolved spectroscopic signals provides another important dimension to examine the accuracy of quantum chemistry methods.
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Affiliation(s)
- Chao Xu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry, South China Normal University, Guangzhou, 510006, P. R. China
| | - Kunni Lin
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry, South China Normal University, Guangzhou, 510006, P. R. China
| | - Deping Hu
- Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety and MOE Key Laboratory of Environmental Theoretical Chemistry, SCNU Environmental Research Institute, School of Environment, South China Normal University, Guangzhou, 510006, P. R. China
| | - Feng Long Gu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry, South China Normal University, Guangzhou, 510006, P. R. China
| | - Maxim F Gelin
- School of Sciences, Hangzhou Dianzi University, Hangzhou, 310018, P. R. China
| | - Zhenggang Lan
- Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety and MOE Key Laboratory of Environmental Theoretical Chemistry, SCNU Environmental Research Institute, School of Environment, South China Normal University, Guangzhou, 510006, P. R. China
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18
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Titov E, Kopp T, Hoche J, Humeniuk A, Mitrić R. (De)localization dynamics of molecular excitons: comparison of mixed quantum–classical and fully quantum treatments. Phys Chem Chem Phys 2022; 24:12136-12148. [DOI: 10.1039/d2cp00586g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular excitons play a central role in processes of solar energy conversion, both natural and artificial. It is therefore no wonder that numerous experimental and theoretical investigations in the last...
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19
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Hu D, Peng J, Chen L, Gelin MF, Lan Z. Spectral Fingerprint of Excited-State Energy Transfer in Dendrimers through Polarization-Sensitive Transient-Absorption Pump-Probe Signals: On-the-Fly Nonadiabatic Dynamics Simulations. J Phys Chem Lett 2021; 12:9710-9719. [PMID: 34590858 DOI: 10.1021/acs.jpclett.1c02640] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The time-resolved polarization-sensitive transient-absorption (TA) pump-probe (PP) spectra are simulated using on-the-fly surface-hopping nonadiabatic dynamics and the doorway-window representation of nonlinear spectroscopy. A dendrimer model system composed of two linear phenylene ethynylene units (2-ring and 3-ring) is taken as an example. The ground-state bleach (GSB), stimulated emission (SE), and excited-state absorption (ESA) contributions as well as the total TA PP signals are obtained and carefully analyzed. It is shown that intramolecular excited-state energy transfer from the 2-ring unit to the 3-ring unit can be conveniently identified by employing pump and probe pulses with different polarizations. Our results demonstrate that time-resolved polarization-sensitive TA PP signals provide a powerful tool for the elucidation of excited-state energy-transfer pathways, notably in molecular systems possessing several optically bright nonadiabatically coupled electronic states with different orientations of transition dipole moments.
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Affiliation(s)
- Deping Hu
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China
- School of Environment, South China Normal University, Guangzhou 510006, China
| | - Jiawei Peng
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China
- School of Environment, South China Normal University, Guangzhou 510006, China
| | - Lipeng Chen
- Max Planck Institute for the Physics of Complex Systems, 01187 Dresden, Germany
| | - Maxim F Gelin
- School of Sciences, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Zhenggang Lan
- SCNU Environmental Research Institute, Guangdong Provincial Key Laboratory of Chemical Pollution and Environmental Safety & MOE Key Laboratory of Environmental Theoretical Chemistry, South China Normal University, Guangzhou 510006, China
- School of Environment, South China Normal University, Guangzhou 510006, China
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20
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Lee IS, Ha JK, Han D, Kim TI, Moon SW, Min SK. PyUNIxMD: A Python-based excited state molecular dynamics package. J Comput Chem 2021; 42:1755-1766. [PMID: 34197646 PMCID: PMC8362049 DOI: 10.1002/jcc.26711] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Revised: 06/10/2021] [Accepted: 06/16/2021] [Indexed: 01/17/2023]
Abstract
Theoretical/computational description of excited state molecular dynamics is nowadays a crucial tool for understanding light-matter interactions in many materials. Here we present an open-source Python-based nonadiabatic molecular dynamics program package, namely PyUNIxMD, to deal with mixed quantum-classical dynamics for correlated electron-nuclear propagation. The PyUNIxMD provides many interfaces for quantum chemical calculation methods with commercial and noncommercial ab initio and semiempirical quantum chemistry programs. In addition, the PyUNIxMD offers many nonadiabatic molecular dynamics algorithms such as fewest-switch surface hopping and its derivatives as well as decoherence-induced surface hopping based on the exact factorization (DISH-XF) and coupled-trajectory mixed quantum-classical dynamics (CTMQC) for general purposes. Detailed structures and flows of PyUNIxMD are explained for the further implementations by developers. We perform a nonadiabatic molecular dynamics simulation for a molecular motor system as a simple demonstration.
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Affiliation(s)
- In Seong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Jong-Kwon Ha
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Daeho Han
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Tae In Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Sung Wook Moon
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Seung Kyu Min
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
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21
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Gutiérrez-Arzaluz L, Jia J, Gu C, Czaban-Jóźwiak J, Yin J, Shekhah O, Bakr OM, Eddaoudi M, Mohammed OF. Directional Exciton Migration in Benzoimidazole-Based Metal-Organic Frameworks. J Phys Chem Lett 2021; 12:4917-4927. [PMID: 34008983 DOI: 10.1021/acs.jpclett.1c01053] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Highly luminescent metal-organic frameworks (MOFs) have recently received great attention due to their potential applications as sensors and light-emitting devices. In these MOFs, the highly ordered fluorescent organic linkers positioning prevents excited-state self-quenching and rotational motion, enhancing their light-harvesting properties. Here, the exciton migration between the organic linkers with the same chemical structure but different protonation degrees in Zr-based MOFs was explored and deciphered using ultrafast laser spectroscopy and density functional theory calculations. First, we clearly demonstrate how hydrogen-bonding interactions between free linkers and solvents affect the twisting changes, internal conversion processes, and luminescent behavior of a benzoimidazole-based linker. Second, we provide clear evidence of an ultrafast energy transfer between well-aligned adjacent linkers with different protonation states inside the MOF. These findings provide a new fundamental photophysical insight into the exciton migration dynamics between linkers with different protonation states coexisting at different locations in MOFs and serve as a benchmark for improving light-harvesting MOF architectures.
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Affiliation(s)
- Luis Gutiérrez-Arzaluz
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- KAUST Catalysis Center, Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Jiangtao Jia
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- Functional Materials Design, Discovery and Development Research Group, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Chun Gu
- Laboratory for Shock Wave and Detonation Physics, Institute of Fluid Physics, China Academy of Engineering Physics, Mianyang 621900, China
| | - Justyna Czaban-Jóźwiak
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- Functional Materials Design, Discovery and Development Research Group, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Jun Yin
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- KAUST Catalysis Center, Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Osama Shekhah
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- Functional Materials Design, Discovery and Development Research Group, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Osman M Bakr
- KAUST Catalysis Center, Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Mohamed Eddaoudi
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- Functional Materials Design, Discovery and Development Research Group, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Omar F Mohammed
- Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Advanced Membranes and Porous Materials Center, Thuwal 23955-6900, Kingdom of Saudi Arabia
- KAUST Catalysis Center, Physical Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
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22
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Feng M, Gilson MK. Mechanistic analysis of light-driven overcrowded alkene-based molecular motors by multiscale molecular simulations. Phys Chem Chem Phys 2021; 23:8525-8540. [PMID: 33876015 PMCID: PMC8102045 DOI: 10.1039/d0cp06685k] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
We analyze light-driven overcrowded alkene-based molecular motors, an intriguing class of small molecules that have the potential to generate MHz-scale rotation rates. The full rotation process is simulated at multiple scales by combining quantum surface-hopping molecular dynamics (MD) simulations for the photoisomerization step with classical MD simulations for the thermal helix inversion step. A Markov state analysis resolves conformational substates, their interconversion kinetics, and their roles in the motor's rotation process. Furthermore, motor performance metrics, including rotation rate and maximal power output, are computed to validate computations against experimental measurements and to inform future designs. Lastly, we find that to correctly model these motors, the force field must be optimized by fitting selected parameters to reference quantum mechanical energy surfaces. Overall, our simulations yield encouraging agreement with experimental observables such as rotation rates, and provide mechanistic insights that may help future designs.
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Affiliation(s)
- Mudong Feng
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, 92093, USA.
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23
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Roy P, Sardjan AS, Cnossen A, Browne WR, Feringa BL, Meech SR. Excited State Structure Correlates with Efficient Photoconversion in Unidirectional Motors. J Phys Chem Lett 2021; 12:3367-3372. [PMID: 33784091 DOI: 10.1021/acs.jpclett.1c00710] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The design of unidirectional photomolecular motors demands a critical understanding of an ultrafast photochemical isomerization. An intermediate dark excited state mediates the reaction via a conical intersection (CI) with the ground state, but a correlation between molecular structure and photoisomerization efficiency has remained elusive. Here femtosecond stimulated Raman spectroscopy captures vibrational spectra of the dark state in a set of molecular motors bearing different substituents. A direct correlation between isomerization quantum yield, dark state lifetime, and excited state vibrational spectrum is found. Electron withdrawing substituents lead to activity in lower frequency modes, which we correlate with a pyramidalization distortion at the ethylenic axle occurring within 100 fs. This structure is not formed with an electron donating substituent, where the axle retains double bond character. Further structural reorganization is observed and assigned to excited state reorganization and charge redistribution on the sub-picosecond time scale. The correlation of the dark state structure with photoconversion performance suggests guidelines for developing new more efficient motor derivatives.
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Affiliation(s)
- Palas Roy
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Andy S Sardjan
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Arjen Cnossen
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Wesley R Browne
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Stephen R Meech
- School of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
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24
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Tuning Single-Molecule Conductance by Controlled Electric Field-Induced trans-to-cis Isomerisation. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11083317] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
External electric fields (EEFs) have proven to be very efficient in catalysing chemical reactions, even those inaccessible via wet-chemical synthesis. At the single-molecule level, oriented EEFs have been successfully used to promote in situ single-molecule reactions in the absence of chemical catalysts. Here, we elucidate the effect of an EEFs on the structure and conductance of a molecular junction. Employing scanning tunnelling microscopy break junction (STM-BJ) experiments, we form and electrically characterize single-molecule junctions of two tetramethyl carotene isomers. Two discrete conductance signatures show up more prominently at low and high applied voltages which are univocally ascribed to the trans and cis isomers of the carotenoid, respectively. The difference in conductance between both cis-/trans- isomers is in concordance with previous predictions considering π-quantum interference due to the presence of a single gauche defect in the trans isomer. Electronic structure calculations suggest that the electric field polarizes the molecule and mixes the excited states. The mixed states have a (spectroscopically) allowed transition and, therefore, can both promote the cis-isomerization of the molecule and participate in electron transport. Our work opens new routes for the in situ control of isomerisation reactions in single-molecule contacts.
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25
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Lin TC, Liu ZY, Liu SH, Koshevoy IO, Chou PT. Counterion Migration Driven by Light-Induced Intramolecular Charge Transfer. JACS AU 2021; 1:282-293. [PMID: 34467293 PMCID: PMC8395631 DOI: 10.1021/jacsau.0c00107] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Indexed: 05/14/2023]
Abstract
A series of D-π-A + pyridinium compounds, in which D = -NPh2 and A+ = -PyMe+ are linked by various amounts of linear phenyl spacers, were strategically designed and synthesized. Their characterization revealed the presence of excited-state intramolecular charge transfer (ESICT) that triggers a corresponding response from the counterion. In medium and strong polar solvents, the fast solvent relaxation occurring after ESICT overwhelms the counterion effect, showing typical emission solvatochromism. In weakly polar solvents, ESICT induces counteranion migration for electrostatic stabilization, the time scale of which is dependent on the radius of the counteranion, the length of the π-linker, and the viscosity of the solvent. In low-viscosity organic solvents such as toluene, counteranion migration occurs within several tens to hundreds of picoseconds, resulting in a time-dependent continuous emission that can be resolved from the spectral temporal evolution. Concrete evidence for this is provided by the chemical synthesis of a D-π-A + pyridinium-sulfur trioxide- zwitterion, where anion migration is restricted due to its internally locked ion pair. As a result, only a single emission band can be observed. These comprehensive studies prove that the ion migration process may be significant for a wide range of ESICT-type ionic fluorophores. Such an ionic movement, triggered by optically pumped ESICT of the D-π-A + dyad, is similar to the molecular machine driven by the redox reaction, but with a facile access and fast response.
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Affiliation(s)
- Ta-Chun Lin
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617, ROC
| | - Zong-Ying Liu
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617, ROC
| | - Shih-Hung Liu
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617, ROC
| | - Igor O. Koshevoy
- Department
of Chemistry, University of Eastern Finland, Yliopistokatu 7, 80101 Joensuu, Finland
| | - Pi-Tai Chou
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617, ROC
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26
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Wilcken R, Huber L, Grill K, Guentner M, Schildhauer M, Thumser S, Riedle E, Dube H. Tuning the Ground and Excited State Dynamics of Hemithioindigo Molecular Motors by Changing Substituents. Chemistry 2020; 26:13507-13512. [PMID: 32692896 PMCID: PMC7702134 DOI: 10.1002/chem.202003096] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Indexed: 12/11/2022]
Abstract
Efficiency and performance of light triggered molecular motors are crucial features that need to be mechanistically understood to improve the performance and enable conscious property tailoring for specific applications. In this work, three different hemithioindigo-based molecular motors are investigated and all four steps in their complete unidirectional rotation are unraveled fully quantitatively. Transient absorption spectroscopy across twelve orders of magnitude in time is used to probe the fs nuclear motions up to the ms thermal kinetics, covering the timeframe of the whole motor rotation. The newly known full mechanisms allow simulation of the motor systems to scrutinize their performance at realistic illumination conditions. This highlights the importance of photoisomerization quantum yields for the rotation speed. The substitution pattern in close proximity to the rotation axle influences the excited and ground state properties. Reduction of electron donation and concomitant increase of steric hindrance leads to faster photoisomerization reactions with quasi-ballistic behavior, but also to a slight decrease in the quantum efficiency. The expected decelerating effects of increased sterics are primarily manifested in the ground state. A promising approach for next-generation hemithioindigo motors is to elevate electron donation at the rotor fragment followed by an increase of steric hindrance.
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Affiliation(s)
- Roland Wilcken
- Lehrstuhl für BioMolekulare OptikLudwig-Maximilians-Universität MünchenOettingenstr. 6780538MünchenGermany
| | - Ludwig Huber
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
| | - Kerstin Grill
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
| | - Manuel Guentner
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
| | - Monika Schildhauer
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
| | - Stefan Thumser
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
| | - Eberhard Riedle
- Lehrstuhl für BioMolekulare OptikLudwig-Maximilians-Universität MünchenOettingenstr. 6780538MünchenGermany
| | - Henry Dube
- Department ChemieLudwig-Maximilians-Universität MünchenButenandtstr. 5–13 (Haus F)81377MünchenGermany
- Chair of Organic Chemistry IDepartment of Chemistry and PharmacyFriedrich-Alexander-Universität Erlangen-NürnbergNikolaus-Fiebiger-Str. 1091058ErlangenGermany
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27
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Amirjalayer S, Buma WJ. Light on the Structural Evolution of Photoresponsive Molecular Switches in Electronically Excited States. Chemistry 2019; 25:6252-6258. [PMID: 30576061 DOI: 10.1002/chem.201805810] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2018] [Revised: 12/21/2018] [Indexed: 11/08/2022]
Abstract
Stimuli-responsive materials are attracting extensive interest as they offer the opportunity to transform external inputs such as light into a functionality by control at the molecular level. As a result, a large number of molecular building units have been developed that enable switching between two or more states. Since the trajectory describing the transition between the various states defines the efficiency of the usually immobilized unit and the resulting functionality, it does not suffice to merely consider the initial and final states of the switching process. A key challenge is in fact to decipher at the atomic scale the actual motion that takes place after photoexcitation. Understanding and being able to manipulate this trajectory is crucial for an efficient implementation of photoactive molecular switches into functional materials, as well as to rationally develop novel tailor-made materials. In this Concept article, we highlight the potential to characterize in detail photoinitiated switching mechanisms by combining quantum chemical calculations with advanced laser spectroscopic techniques that probe the vibrational manifold of electronically excited states and its evolution.
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Affiliation(s)
- Saeed Amirjalayer
- Physikalisches Institut and Center for Multiscale Theory &, Computation (CMTC), Westfälische Wilhelms-Universität Münster, Willhelm-Klemm-Strasse 10, 48149, Münster, Germany.,Center for Nanotechnology (CeNTech), Heisenbergstrasse 11, 48149, Münster, Germany
| | - Wybren Jan Buma
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098, XH, Amsterdam, The Netherlands
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28
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Ikeda T, Dijkstra AG, Tanimura Y. Modeling and analyzing a photo-driven molecular motor system: Ratchet dynamics and non-linear optical spectra. J Chem Phys 2019; 150:114103. [DOI: 10.1063/1.5086948] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Tatsushi Ikeda
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Arend G. Dijkstra
- School of Chemistry and School of Physics and Astronomy, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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29
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Daoud H, Joubert-Doriol L, Izmaylov AF, Dwayne Miller R. Exploring vibrational ladder climbing in vibronic coupling models: Toward experimental observation of a geometric phase signature of a conical intersection. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.08.034] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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30
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Wiley TE, Konar A, Miller NA, Spears KG, Sension RJ. Primed for Efficient Motion: Ultrafast Excited State Dynamics and Optical Manipulation of a Four Stage Rotary Molecular Motor. J Phys Chem A 2018; 122:7548-7558. [DOI: 10.1021/acs.jpca.8b06472] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Theodore E. Wiley
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, Michigan 48109-1055, United States
| | - Arkaprabha Konar
- Department of Physics, University of Michigan, 450 Church Street, Ann Arbor, Michigan 48109-1040, United States
| | - Nicholas A. Miller
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, Michigan 48109-1055, United States
| | - Kenneth G. Spears
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, Michigan 48109-1055, United States
| | - Roseanne J. Sension
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, Michigan 48109-1055, United States
- Department of Physics, University of Michigan, 450 Church Street, Ann Arbor, Michigan 48109-1040, United States
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31
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Abstract
The field of synthetic molecular machines has quickly evolved in recent years, growing from a fundamental curiosity to a highly active field of chemistry. Many different applications are being explored in areas such as catalysis, self-assembled and nanostructured materials, and molecular electronics. Rotary molecular motors hold great promise for achieving dynamic control of molecular functions as well as for powering nanoscale devices. However, for these motors to reach their full potential, many challenges still need to be addressed. In this paper we focus on the design principles of rotary motors featuring a double-bond axle and discuss the major challenges that are ahead of us. Although great progress has been made, further design improvements, for example in terms of efficiency, energy input, and environmental adaptability, will be crucial to fully exploit the opportunities that these rotary motors offer.
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32
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Hall CR, Browne WR, Feringa BL, Meech SR. Mapping the Excited‐State Potential Energy Surface of a Photomolecular Motor. Angew Chem Int Ed Engl 2018; 57:6203-6207. [DOI: 10.1002/anie.201802126] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Indexed: 01/05/2023]
Affiliation(s)
| | - Wesley R. Browne
- Molecular Inorganic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
| | - Ben L. Feringa
- Synthetic Organic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
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33
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Hall CR, Browne WR, Feringa BL, Meech SR. Mapping the Excited‐State Potential Energy Surface of a Photomolecular Motor. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201802126] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
| | - Wesley R. Browne
- Molecular Inorganic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
| | - Ben L. Feringa
- Synthetic Organic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
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34
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Wilcken R, Schildhauer M, Rott F, Huber LA, Guentner M, Thumser S, Hoffmann K, Oesterling S, de Vivie-Riedle R, Riedle E, Dube H. Complete Mechanism of Hemithioindigo Motor Rotation. J Am Chem Soc 2018; 140:5311-5318. [DOI: 10.1021/jacs.8b02349] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Roland Wilcken
- Lehrstuhl für BioMolekulare Optik, Ludwig-Maximilians-Universität München, Oettingenstrasse 67, D-80538 München, Germany
| | | | | | | | | | | | | | | | | | - Eberhard Riedle
- Lehrstuhl für BioMolekulare Optik, Ludwig-Maximilians-Universität München, Oettingenstrasse 67, D-80538 München, Germany
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35
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Pang X, Jiang C, Qi Y, Yuan L, Hu D, Zhang X, Zhao D, Wang D, Lan Z, Li F. Ultrafast unidirectional chiral rotation in the Z–E photoisomerization of two azoheteroarene photoswitches. Phys Chem Chem Phys 2018; 20:25910-25917. [DOI: 10.1039/c8cp04762f] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Based on a large number of trajectories starting from the Z-isomer, for both azoheteroarenes, more than 99% of the trajectories decay through conical intersections with the same helicities as their initial geometries.
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Affiliation(s)
- Xiaojuan Pang
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Chenwei Jiang
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Yongnan Qi
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Ling Yuan
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Deping Hu
- Qingdao Institute of Bioenergy and Bioprocess Technology
- Chinese Academy of Sciences
- Qingdao
- China
| | - Xiuxing Zhang
- Department of Physics
- Weinan Normal University
- Weinan 714000
- China
| | - Di Zhao
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Dongdong Wang
- Department of Applied Chemistry
- School of Science
- Xi’an Jiaotong University
- Xi’an 710049
- China
| | - Zhenggang Lan
- Qingdao Institute of Bioenergy and Bioprocess Technology
- Chinese Academy of Sciences
- Qingdao
- China
| | - Fuli Li
- Key Laboratory for Quantum Information and Quantum Optoelectronic Devices Shaanxi, and Department of Applied Physics
- Xi’an Jiaotong University
- Xi’an 710049
- China
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36
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Beekmeyer R, Parkes MA, Ridgwell L, Riley JW, Chen J, Feringa BL, Kerridge A, Fielding HH. Unravelling the electronic structure and dynamics of an isolated molecular rotary motor in the gas-phase. Chem Sci 2017; 8:6141-6148. [PMID: 28989644 PMCID: PMC5627543 DOI: 10.1039/c7sc01997a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Accepted: 06/27/2017] [Indexed: 11/21/2022] Open
Abstract
Light-driven molecular motors derived from chiral overcrowded alkenes are an important class of compounds in which sequential photochemical and thermal rearrangements result in unidirectional rotation of one part of the molecule with respect to another. Here, we employ anion photoelectron spectroscopy to probe the electronic structure and dynamics of a unidirectional molecular rotary motor anion in the gas-phase and quantum chemistry calculations to guide the interpretation of our results. We find that following photoexcitation of the first electronically excited state, the molecule rotates around its axle and some population remains on the excited potential energy surface and some population undergoes internal conversion back to the electronic ground state. These observations are similar to those observed in time-resolved measurements of rotary molecular motors in solution. This work demonstrates the potential of anion photoelectron spectroscopy for studying the electronic structure and dynamics of molecular motors in the gas-phase, provides important benchmarks for theory and improves our fundamental understanding of light-activated molecular rotary motors, which can be used to inform the design of new photoactivated nanoscale devices.
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Affiliation(s)
- Reece Beekmeyer
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Michael A Parkes
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Luke Ridgwell
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Jamie W Riley
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Jiawen Chen
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Andrew Kerridge
- Department of Chemistry , Lancaster University , Lancaster , LA1 4YB , UK
| | - Helen H Fielding
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
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37
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38
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Hall CR, Conyard J, Heisler IA, Jones G, Frost J, Browne WR, Feringa BL, Meech SR. Ultrafast Dynamics in Light-Driven Molecular Rotary Motors Probed by Femtosecond Stimulated Raman Spectroscopy. J Am Chem Soc 2017; 139:7408-7414. [PMID: 28486804 DOI: 10.1021/jacs.7b03599] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Photochemical isomerization in sterically crowded chiral alkenes is the driving force for molecular rotary motors in nanoscale machines. Here the excited-state dynamics and structural evolution of the prototypical light-driven rotary motor are followed on the ultrafast time scale by femtosecond stimulated Raman spectroscopy (FSRS) and transient absorption (TA). TA reveals a sub-100-fs blue shift and decay of the Franck-Condon bright state arising from relaxation along the reactive potential energy surface. The decay is accompanied by coherently excited vibrational dynamics which survive the excited-state structural evolution. The ultrafast Franck-Condon bright state relaxes to a dark excited state, which FSRS reveals to have a rich spectrum compared to the electronic ground state, with the most intense Raman-active modes shifted to significantly lower wavenumber. This is discussed in terms of a reduced bond order of the central bridging bond and overall weakening of bonds in the dark state, which is supported by electronic structure calculations. The observed evolution in the FSRS spectrum is assigned to vibrational cooling accompanied by partitioning of the dark state between the product isomer and the original ground state. Formation of the product isomer is observed in real time by FSRS. It is formed vibrationally hot and cools over several picoseconds, completing the characterization of the light-driven half of the photocycle.
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Affiliation(s)
- Christopher R Hall
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Jamie Conyard
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Ismael A Heisler
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Garth Jones
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - James Frost
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Wesley R Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ben L Feringa
- Synthetic Organic Chemistry, Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Stephen R Meech
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
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39
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Conyard J, Stacko P, Chen J, McDonagh S, Hall CR, Laptenok SP, Browne WR, Feringa BL, Meech SR. Ultrafast Excited State Dynamics in Molecular Motors: Coupling of Motor Length to Medium Viscosity. J Phys Chem A 2017; 121:2138-2150. [DOI: 10.1021/acs.jpca.7b00087] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Jamie Conyard
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Peter Stacko
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Jiawen Chen
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Sophie McDonagh
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Christopher R. Hall
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Sergey P. Laptenok
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Wesley R. Browne
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ben L. Feringa
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Stephen R. Meech
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
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