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For: Sun G, Jin Y, Li S, Yang Z, Shi B, Chang C, Abramov YA. Virtual Coformer Screening by Crystal Structure Predictions: Crucial Role of Crystallinity in Pharmaceutical Cocrystallization. J Phys Chem Lett 2020;11:8832-8838. [PMID: 32969658 DOI: 10.1021/acs.jpclett.0c02371] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Number Cited by Other Article(s)
1
Fox R, Klug J, Thompson D, Reilly A. Computational predictions of cocrystal formation: A benchmark study of 28 assemblies comparing five methods from high-throughput to advanced models. J Comput Chem 2024;45:2465-2475. [PMID: 38958249 DOI: 10.1002/jcc.27454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 06/10/2024] [Accepted: 06/12/2024] [Indexed: 07/04/2024]
2
Muzioł TM, Bronikowska E. Driving Forces in the Formation of Paracetamol Cocrystals and Solvate with Naphthalene, Quinoline and Acridine. Molecules 2024;29:4437. [PMID: 39339432 PMCID: PMC11434482 DOI: 10.3390/molecules29184437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2024] [Revised: 09/06/2024] [Accepted: 09/16/2024] [Indexed: 09/30/2024]  Open
3
Sadeghi MS, Guo R, Bellucci MA, Quino J, Buckle EL, Nisbet ML, Yang Z, Greenwell C, Gorka DE, Pickard Iv FC, Wood GPF, Sun G, Wen SH, Krzyzaniak JF, Meenan PA, Hancock BC, Yang XH. Tale of Two Polymorphs: Investigating the Structural Differences and Dynamic Relationship between Nirmatrelvir Solid Forms (Paxlovid). Mol Pharm 2024;21:3800-3814. [PMID: 39051563 DOI: 10.1021/acs.molpharmaceut.3c01074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2024]
4
Wang Y, Jiang Y, Zhou Y, He H, Tang J, Luo A, Liu Z, Ma C, Xiao Q, Guan T, Dai C. Cocrystal Prediction of Nifedipine Based on the Graph Neural Network and Molecular Electrostatic Potential Surface. AAPS PharmSciTech 2024;25:133. [PMID: 38862767 DOI: 10.1208/s12249-024-02846-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Accepted: 05/20/2024] [Indexed: 06/13/2024]  Open
5
Pimonova Y, Carpenter JE, Gruenwald M. Thermodynamic Stability Is a Poor Indicator of Cocrystallization in Models of Organic Molecules. J Am Chem Soc 2024;146:2805-2815. [PMID: 38241026 DOI: 10.1021/jacs.3c13030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
6
Shah HS, Michelle C, Xie T, Chaturvedi K, Kuang S, Abramov YA. Computational and Experimental Screening Approaches to Aripiprazole Salt Crystallization. Pharm Res 2023;40:2779-2789. [PMID: 37127778 DOI: 10.1007/s11095-023-03522-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 04/12/2023] [Indexed: 05/03/2023]
7
Beran GJO. Frontiers of molecular crystal structure prediction for pharmaceuticals and functional organic materials. Chem Sci 2023;14:13290-13312. [PMID: 38033897 PMCID: PMC10685338 DOI: 10.1039/d3sc03903j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 11/02/2023] [Indexed: 12/02/2023]  Open
8
Essen CV, Luedeker D. In silico co-crystal design: Assessment of the latest advances. Drug Discov Today 2023;28:103763. [PMID: 37689178 DOI: 10.1016/j.drudis.2023.103763] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 08/18/2023] [Accepted: 08/31/2023] [Indexed: 09/11/2023]
9
Deng Y, Liu S, Jiang Y, Martins ICB, Rades T. Recent Advances in Co-Former Screening and Formation Prediction of Multicomponent Solid Forms of Low Molecular Weight Drugs. Pharmaceutics 2023;15:2174. [PMID: 37765145 PMCID: PMC10538140 DOI: 10.3390/pharmaceutics15092174] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 08/15/2023] [Accepted: 08/19/2023] [Indexed: 09/29/2023]  Open
10
Zheng L, Zhu B, Wu Z, Guo M, Chen J, Hong M, Liu G, Li W, Ren G, Tang Y. Pharmaceutical Cocrystal Discovery via 3D-SMINBR: A New Network Recommendation Tool Augmented by 3D Molecular Conformations. J Chem Inf Model 2023. [PMID: 37399241 DOI: 10.1021/acs.jcim.3c00066] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/05/2023]
11
Racher F, Petrick TL, Braun DE. Exploring the Supramolecular Interactions and Thermal Stability of Dapsone:Bipyridine Cocrystals by Combining Computational Chemistry with Experimentation. CRYSTAL GROWTH & DESIGN 2023;23:4638-4654. [PMID: 37304396 PMCID: PMC10251420 DOI: 10.1021/acs.cgd.3c00387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 04/21/2023] [Indexed: 06/13/2023]
12
Abramov YA, Iuzzolino L, Jin Y, York G, Chen CH, Shultz CS, Yang Z, Chang C, Shi B, Zhou T, Greenwell C, Sekharan S, Lee AY. Cocrystal Synthesis through Crystal Structure Prediction. Mol Pharm 2023. [PMID: 37279175 DOI: 10.1021/acs.molpharmaceut.2c01098] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
13
Shah HS, Yuan J, Xie T, Yang Z, Chang C, Greenwell C, Zeng Q, Sun G, Read BN, Wilson TS, Valle HU, Kuang S, Wang J, Sekharan S, Bruhn JF. Absolute Configuration Determination of Chiral API Molecules by MicroED Analysis of Cocrystal Powders Formed Based on Cocrystal Propensity Prediction Calculations. Chemistry 2023;29:e202203970. [PMID: 36744589 PMCID: PMC10089073 DOI: 10.1002/chem.202203970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Indexed: 02/07/2023]
14
Surov AO, Ramazanova AG, Voronin AP, Drozd KV, Churakov AV, Perlovich GL. Virtual Screening, Structural Analysis, and Formation Thermodynamics of Carbamazepine Cocrystals. Pharmaceutics 2023;15:pharmaceutics15030836. [PMID: 36986697 PMCID: PMC10052035 DOI: 10.3390/pharmaceutics15030836] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 02/28/2023] [Accepted: 03/02/2023] [Indexed: 03/08/2023]  Open
15
Guidetti M, Hilfiker R, Kuentz M, Bauer-Brandl A, Blatter F. Exploring the Cocrystal Landscape of Posaconazole by Combining High-Throughput Screening Experimentation with Computational Chemistry. CRYSTAL GROWTH & DESIGN 2023;23:842-852. [PMID: 36747574 PMCID: PMC9896487 DOI: 10.1021/acs.cgd.2c01072] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 12/05/2022] [Indexed: 06/18/2023]
16
Sugden IJ, Braun DE, Bowskill DH, Adjiman CS, Pantelides CC. Efficient Screening of Coformers for Active Pharmaceutical Ingredient Cocrystallization. CRYSTAL GROWTH & DESIGN 2022;22:4513-4527. [PMID: 35915670 PMCID: PMC9337750 DOI: 10.1021/acs.cgd.2c00433] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
17
Abramov YA, Sun G, Zeng Q. Emerging Landscape of Computational Modeling in Pharmaceutical Development. J Chem Inf Model 2022;62:1160-1171. [PMID: 35226809 DOI: 10.1021/acs.jcim.1c01580] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
18
Sarathi P, Padhi S. Insight of the various in silico screening techniques developed for assortment of cocrystal formers and their thermodynamic characterization. Drug Dev Ind Pharm 2022;47:1523-1534. [PMID: 35164621 DOI: 10.1080/03639045.2022.2042554] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
19
Lee MJ, Kim JY, Kim P, Lee IS, Mswahili ME, Jeong YS, Choi GJ. Novel Cocrystals of Vonoprazan: Machine Learning-Assisted Discovery. Pharmaceutics 2022;14:pharmaceutics14020429. [PMID: 35214161 PMCID: PMC8877905 DOI: 10.3390/pharmaceutics14020429] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 02/11/2022] [Accepted: 02/14/2022] [Indexed: 02/04/2023]  Open
20
Ohyama M, Amari S, Takiyama H. Operation Design of Co-Crystallization Using Homogeneity Evaluation Including “Single Component Excess” Index. JOURNAL OF CHEMICAL ENGINEERING OF JAPAN 2022. [DOI: 10.1252/jcej.21we090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
21
Hughes DS, Bingham AL, Hursthouse MB, Threlfall TL, Bond AD. The extensive solid-form landscape of sulfathiazole: hydrogen-bond topology and node shape. CrystEngComm 2022. [DOI: 10.1039/d2ce00964a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
22
Hughes DS, Bingham AL, Hursthouse MB, Threlfall TL, Bond AD. The extensive solid-form landscape of sulfathiazole: geometrical similarity and interaction energies. CrystEngComm 2022. [DOI: 10.1039/d1ce01516h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
23
Kim P, Lee IS, Kim JY, Mswahili M, Jeong YS, Yoon WJ, Yun H, Lee MJ, Choi GJ. A study to discover novel pharmaceutical cocrystals of pelubiprofen with a machine learning approach compared. CrystEngComm 2022. [DOI: 10.1039/d2ce00153e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
24
Parkan A, Mirzaei M, Tavakoli N, Homayouni A. Molecular interactions of indomethacin and amino acids: Computational approach. MAIN GROUP CHEMISTRY 2021. [DOI: 10.3233/mgc-210157] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
25
Jiang Y, Yang Z, Guo J, Li H, Liu Y, Guo Y, Li M, Pu X. Coupling complementary strategy to flexible graph neural network for quick discovery of coformer in diverse co-crystal materials. Nat Commun 2021;12:5950. [PMID: 34642333 PMCID: PMC8511140 DOI: 10.1038/s41467-021-26226-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Accepted: 09/23/2021] [Indexed: 11/21/2022]  Open
26
Guo M, Sun X, Chen J, Cai T. Pharmaceutical cocrystals: A review of preparations, physicochemical properties and applications. Acta Pharm Sin B 2021;11:2537-2564. [PMID: 34522597 PMCID: PMC8424375 DOI: 10.1016/j.apsb.2021.03.030] [Citation(s) in RCA: 69] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2021] [Revised: 02/22/2021] [Accepted: 03/10/2021] [Indexed: 12/15/2022]  Open
27
Sekharan S, Liu X, Yang Z, Liu X, Deng L, Ruan S, Abramov Y, Sun G, Li S, Zhou T, Shi B, Zeng Q, Zeng Q, Chang C, Jin Y, Shi X. Selecting a stable solid form of remdesivir using microcrystal electron diffraction and crystal structure prediction. RSC Adv 2021;11:17408-17412. [PMID: 35479679 PMCID: PMC9033196 DOI: 10.1039/d1ra03100g] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 04/27/2021] [Indexed: 12/20/2022]  Open
28
Wong SN, Chen YCS, Xuan B, Sun CC, Chow SF. Cocrystal engineering of pharmaceutical solids: therapeutic potential and challenges. CrystEngComm 2021. [DOI: 10.1039/d1ce00825k] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
29
Yuan J, Liu X, Wang S, Chang C, Zeng Q, Song Z, Jin Y, Zeng Q, Sun G, Ruan S, Greenwell C, Abramov YA. Virtual coformer screening by a combined machine learning and physics-based approach. CrystEngComm 2021. [DOI: 10.1039/d1ce00587a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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