1
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Köksaldı İÇ, Avcı E, Köse S, Özkul G, Kehribar EŞ, Şafak Şeker UÖ. Genetically engineered bacterial biofilm materials enhances portable whole cell sensing. Biosens Bioelectron 2024; 264:116644. [PMID: 39137519 DOI: 10.1016/j.bios.2024.116644] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2024] [Revised: 07/16/2024] [Accepted: 08/07/2024] [Indexed: 08/15/2024]
Abstract
In recent years, whole-cell biosensors (WCBs) have emerged as a potent approach for environmental monitoring and on-site analyte detection. These biosensors harness the biological apparatus of microorganisms to identify specific analytes, offering advantages in sensitivity, specificity, and real-time monitoring capabilities. A critical hurdle in biosensor development lies in ensuring the robust attachment of cells to surfaces, a crucial step for practical utility. In this study, we present a comprehensive approach to tackle this challenge via engineering Escherichia coli cells for immobilization on paper through the Curli biofilm pathway. Furthermore, incorporating a cellulose-binding peptide domain to the CsgA biofilm protein enhances cell adhesion to paper surfaces, consequently boosting biosensor efficacy. To demonstrate the versatility of this platform, we developed a WCB for copper, optimized to exhibit a discernible response, even with the naked eye. To confirm its suitability for practical field use, we characterized our copper sensor under various environmental conditions-temperature, salinity, and pH-to mimic real-world scenarios. The biosensor-equipped paper discs can be freeze-dried for deployment in on-site applications, providing a practical method for long-term storage without loss of sensitivity paper discs demonstrate sustained functionality and viability even after months of storage with 5 μM limit of detection for copper with visible-to-naked-eye signal levels. Biofilm-mediated surface attachment and analyte sensing can be independently engineered, allowing for flexible utilization of this platform as required. With the implementation of copper sensing as a proof-of-concept study, we underscore the potential of WCBs as a promising avenue for the on-site detection of a multitude of analytes.
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Affiliation(s)
- İlkay Çisil Köksaldı
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Ece Avcı
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Sıla Köse
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Gökçe Özkul
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Ebru Şahin Kehribar
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Urartu Özgür Şafak Şeker
- UNAM-National Nanotechnology Research Center, Bilkent University, 06800, Ankara, Turkey; Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey.
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2
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Qian X, Xu Y, Xu Y. Bacterial cellulose based TiO 2-CdS nanocomposite gel with enhanced photocatalytic activity for adsorptive degradation of cationic dye. Int J Biol Macromol 2024; 259:127873. [PMID: 37926309 DOI: 10.1016/j.ijbiomac.2023.127873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 09/07/2023] [Accepted: 11/01/2023] [Indexed: 11/07/2023]
Abstract
Dye released by industrial is one of the main known pollutants in wastewater, which is harmfully affected to the human health. Adsorptive method by absorbents and photocatalytic degradation technique are advanced technologies to remove dyes from wastewater. However, the single technique mentioned above has imperfections limiting its application. Herein, in order to integrate the two techniques and take both advantages, bacterial cellulose (BC) based titanium dioxide (TiO2)‑cadmium sulfide (CdS) nanocomposite gel was prepared by microwave-assisted solvothermal synthesis. The BC@TiO2-CdS nanocomposite gel was characterized by SEM, EDS, XRD, XPS, Raman spectral and TG, its photocatalytic mechanism was proved by PL. The results showed the TiO2-CdS nanophotocatalyst exhibited binary hierarchical structure and followed the Z-scheme type photocatalytic system. The Z-scheme heterojunction is advantageous for photo-generated charge separation and migration. The photocatalytic performance of BC@TiO2-CdS nanocomposite gel was evaluated by MB degradation under visible light irradiation. Due to synergistic effect of BC matrix and TiO2-CdS, the as-prepared BC@TiO2-CdS nanocomposite gel possesses enhanced photocatalytic activity with 94.47 % removal of methylene blue (MB) after 180 min visible light irradiation. Therefore, this work provides a facile route to fabricate bio-mass based efficient nanophotocatalytic material for pretreating the water pollution.
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Affiliation(s)
- Xin Qian
- Shaanxi University of Science and Technology, Xi'an 710021, Shaanxi, China; National Demonstration Center for Experimental Light Chemistry Engineering Education, Shaanxi University of Science & Technology, China; Shaanxi Provincal Key Laboratory of Papermaking Technology and Specialty Paper Development, China.
| | - Yongjian Xu
- Shaanxi University of Science and Technology, Xi'an 710021, Shaanxi, China; Shaanxi Provincal Key Laboratory of Papermaking Technology and Specialty Paper Development, China; Key Laboratory of Paper Based Functional Materials, China National Light Industry, China.
| | - Yang Xu
- Shaanxi University of Science and Technology, Xi'an 710021, Shaanxi, China; National Demonstration Center for Experimental Light Chemistry Engineering Education, Shaanxi University of Science & Technology, China
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3
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An B, Wang Y, Huang Y, Wang X, Liu Y, Xun D, Church GM, Dai Z, Yi X, Tang TC, Zhong C. Engineered Living Materials For Sustainability. Chem Rev 2023; 123:2349-2419. [PMID: 36512650 DOI: 10.1021/acs.chemrev.2c00512] [Citation(s) in RCA: 41] [Impact Index Per Article: 41.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Recent advances in synthetic biology and materials science have given rise to a new form of materials, namely engineered living materials (ELMs), which are composed of living matter or cell communities embedded in self-regenerating matrices of their own or artificial scaffolds. Like natural materials such as bone, wood, and skin, ELMs, which possess the functional capabilities of living organisms, can grow, self-organize, and self-repair when needed. They also spontaneously perform programmed biological functions upon sensing external cues. Currently, ELMs show promise for green energy production, bioremediation, disease treatment, and fabricating advanced smart materials. This review first introduces the dynamic features of natural living systems and their potential for developing novel materials. We then summarize the recent research progress on living materials and emerging design strategies from both synthetic biology and materials science perspectives. Finally, we discuss the positive impacts of living materials on promoting sustainability and key future research directions.
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Affiliation(s)
- Bolin An
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Yanyi Wang
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Yuanyuan Huang
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xinyu Wang
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Yuzhu Liu
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Dongmin Xun
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - George M Church
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston 02115, Massachusetts United States.,Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston 02115, Massachusetts United States
| | - Zhuojun Dai
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xiao Yi
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Tzu-Chieh Tang
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston 02115, Massachusetts United States.,Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston 02115, Massachusetts United States
| | - Chao Zhong
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.,CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
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4
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Wang Z, Li D, Shi Y, Sun Y, Okeke SI, Yang L, Zhang W, Zhang Z, Shi Y, Xiao L. Recent Implementations of Hydrogel-Based Microbial Electrochemical Technologies (METs) in Sensing Applications. SENSORS (BASEL, SWITZERLAND) 2023; 23:641. [PMID: 36679438 PMCID: PMC9866333 DOI: 10.3390/s23020641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 12/30/2022] [Accepted: 01/03/2023] [Indexed: 06/17/2023]
Abstract
Hydrogel materials have been used extensively in microbial electrochemical technology (MET) and sensor development due to their high biocompatibility and low toxicity. With an increasing demand for sensors across different sectors, it is crucial to understand the current state within the sectors of hydrogel METs and sensors. Surprisingly, a systematic review examining the application of hydrogel-based METs to sensor technologies has not yet been conducted. This review aimed to identify the current research progress surrounding the incorporation of hydrogels within METs and sensors development, with a specific focus on microbial fuel cells (MFCs) and microbial electrolysis cells (MECs). The manufacturing process/cost, operational performance, analysis accuracy and stability of typical hydrogel materials in METs and sensors were summarised and analysed. The current challenges facing the technology as well as potential direction for future research were also discussed. This review will substantially promote the understanding of hydrogel materials used in METs and benefit the development of electrochemical biosensors using hydrogel-based METs.
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Affiliation(s)
- Zeena Wang
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Dunzhu Li
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Yunhong Shi
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Yifan Sun
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Saviour I. Okeke
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Luming Yang
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Wen Zhang
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Zihan Zhang
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Yanqi Shi
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
| | - Liwen Xiao
- Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, D02 PN40 Dublin, Ireland
- TrinityHaus, Trinity College Dublin, D02 PN40 Dublin, Ireland
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5
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Campano C, Rivero-Buceta V, Fabra MJ, Prieto MA. Gaining control of bacterial cellulose colonization by polyhydroxyalkanoate-producing microorganisms to develop bioplasticized ultrathin films. Int J Biol Macromol 2022; 223:1495-1505. [PMID: 36395938 DOI: 10.1016/j.ijbiomac.2022.11.120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/09/2022] [Accepted: 11/12/2022] [Indexed: 11/16/2022]
Abstract
Synergistic methodological strategies based on the fields of microbial biotechnology and materials science open up an enormous range of possibilities for the sustainable production of advanced materials with predictable properties. This study shows how naturally produced polyhydroxyalkanoate (PHA) particles are introduced into bacterial cellulose (BC) driven by their bacterial producers. Thanks to an extensive knowledge of the internal structure of BC, it was possible to control the colonization process, i.e. loading and localization of PHA. A subsequent acid treatment favored the PHA-BC bonding at the position reached by the bacteria. These biodegradable films showed improved mechanical and barrier properties even with respect to reference plastic films 8 times thicker, reaching a Young's modulus 4.25 times higher and an oxygen permeability 3 times lower than those of polyethylene terephthalate (PET) films. Owing to the versatility of the method, a wide variety of materials can be developed for very diverse fields of application.
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Affiliation(s)
- Cristina Campano
- Polymer Biotechnology Group, Biological Research Centre Margarita Salas, Spanish National Research Council (CIB-CSIC), Madrid, Spain.
| | - Virginia Rivero-Buceta
- Polymer Biotechnology Group, Biological Research Centre Margarita Salas, Spanish National Research Council (CIB-CSIC), Madrid, Spain
| | - María José Fabra
- Food Safety and Preservation Department, Institute of Agrochemistry and Food Technology, Spanish National Research Council (IATA-CSIC), Valencia, Spain
| | - M Auxiliadora Prieto
- Polymer Biotechnology Group, Biological Research Centre Margarita Salas, Spanish National Research Council (CIB-CSIC), Madrid, Spain.
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6
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Synthetic biology-powered microbial co-culture strategy and application of bacterial cellulose-based composite materials. Carbohydr Polym 2022; 283:119171. [DOI: 10.1016/j.carbpol.2022.119171] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 01/18/2022] [Accepted: 01/19/2022] [Indexed: 11/18/2022]
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7
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Wei S, Li Y, Li K, Kang A, Zhang S, Feng T, Zhang H, Zhong C. Functional amyloid-chitin hybrid ink coupled with flexible fabrication approaches for diverse macro and micro-structures. Mater Today Bio 2022; 13:100179. [PMID: 34938993 PMCID: PMC8661696 DOI: 10.1016/j.mtbio.2021.100179] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 11/29/2021] [Accepted: 12/01/2021] [Indexed: 10/19/2022] Open
Abstract
The precise fabrication of artificially designed molecular complexes into ordered structures resembling their natural counterparts would find broad applications but remains a major challenge in the field. Here we genetically design chitin-binding domain (CBD)-containing amyloid proteins, and rationally fabricate well-ordered CBD-containing functional amyloid-chitin complex structures by coupling a top-down manufacturing process with a bottom-up self-assembly. Our fabrication approach starts with the dissolution of both CBD-containing functional amyloid and chitin in hexafluoroisopropanol (HFIP) to make a hybrid ink. This hybrid ink platform, coupled with multiple fabrication methods including airbrushing, electrospinning and soft-lithography, produces a series of unique freestanding structures. The structural features of the products, such as the ability to direct the light path and mimicking of the extracellular matrix enable applications in functional light gratings and cell culture, respectively. Further genetic engineering of the protein component allowed tunable functionalization of these materials, including nanoparticle immobilization and protein conjugation, resulting in broad applications in electronic devices and enzyme immobilization. Our technological platform can drive new advances in biocatalysis, tissue engineering, biomedicine, photonics and electronics.
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Affiliation(s)
- Shicao Wei
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Yingfeng Li
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Ke Li
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Anqi Kang
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Siyu Zhang
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Teng Feng
- School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Hui Zhang
- School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Chao Zhong
- Materials and Physical Biology Division, School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
- Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China
- CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
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8
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Gao C, Wang J, Guo L, Hu G, Liu J, Song W, Liu L, Chen X. Immobilization of Microbial Consortium for Glutaric Acid Production from Lysine. ChemCatChem 2021. [DOI: 10.1002/cctc.202101245] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Cong Gao
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Jiaping Wang
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Liang Guo
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Guipeng Hu
- School of Pharmaceutical Science Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Jia Liu
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Wei Song
- School of Pharmaceutical Science Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Liming Liu
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
| | - Xiulai Chen
- State Key Laboratory of Food Science and Technology Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
- International Joint Laboratory on Food Safety Jiangnan University Lihu Road 1800 Wuxi 214122 P. R. China
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9
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Abidi W, Torres-Sánchez L, Siroy A, Krasteva PV. Weaving of bacterial cellulose by the Bcs secretion systems. FEMS Microbiol Rev 2021; 46:6388354. [PMID: 34634120 PMCID: PMC8892547 DOI: 10.1093/femsre/fuab051] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Accepted: 10/08/2021] [Indexed: 12/13/2022] Open
Abstract
Cellulose is the most abundant biological compound on Earth and while it is the predominant building constituent of plants, it is also a key extracellular matrix component in many diverse bacterial species. While bacterial cellulose was first described in the 19th century, it was not until this last decade that a string of structural works provided insights into how the cellulose synthase BcsA, assisted by its inner-membrane partner BcsB, senses c-di-GMP to simultaneously polymerize its substrate and extrude the nascent polysaccharide across the inner bacterial membrane. It is now established that bacterial cellulose can be produced by several distinct types of cellulose secretion systems and that in addition to BcsAB, they can feature multiple accessory subunits, often indispensable for polysaccharide production. Importantly, the last years mark significant progress in our understanding not only of cellulose polymerization per se but also of the bigger picture of bacterial signaling, secretion system assembly, biofilm formation and host tissue colonization, as well as of structural and functional parallels of this dominant biosynthetic process between the bacterial and eukaryotic domains of life. Here, we review current mechanistic knowledge on bacterial cellulose secretion with focus on the structure, assembly and cooperativity of Bcs secretion system components.
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Affiliation(s)
- Wiem Abidi
- 'Structural Biology of Biofilms' group, European Institute of Chemistry and Biology (IECB), F-33600 Pessac, France.,Université de Bordeaux, CNRS, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France.,École doctorale 'Innovation thérapeutique: du fundamental à l'appliqué' (ITFA), Université Paris-Saclay, 92296, Chatenay-Malabry, France
| | - Lucía Torres-Sánchez
- 'Structural Biology of Biofilms' group, European Institute of Chemistry and Biology (IECB), F-33600 Pessac, France.,Université de Bordeaux, CNRS, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France.,École doctorale 'Innovation thérapeutique: du fundamental à l'appliqué' (ITFA), Université Paris-Saclay, 92296, Chatenay-Malabry, France
| | - Axel Siroy
- 'Structural Biology of Biofilms' group, European Institute of Chemistry and Biology (IECB), F-33600 Pessac, France.,Université de Bordeaux, CNRS, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France
| | - Petya Violinova Krasteva
- 'Structural Biology of Biofilms' group, European Institute of Chemistry and Biology (IECB), F-33600 Pessac, France.,Université de Bordeaux, CNRS, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France
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10
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Vignali E, Pollegioni L, Di Nardo G, Valetti F, Gazzola S, Gilardi G, Rosini E. Multi‐Enzymatic Cascade Reactions for the Synthesis of
cis,cis
‐Muconic Acid. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202100849] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Elisa Vignali
- Department of Biotechnology and Life Sciences University of Insubria Via J. H. Dunant 3 21100 Varese Italy
| | - Loredano Pollegioni
- Department of Biotechnology and Life Sciences University of Insubria Via J. H. Dunant 3 21100 Varese Italy
| | - Giovanna Di Nardo
- Department of Life Sciences and Systems Biology University of Turin Via Accademia Albertina 13 10123 Torino Italy
| | - Francesca Valetti
- Department of Life Sciences and Systems Biology University of Turin Via Accademia Albertina 13 10123 Torino Italy
| | - Silvia Gazzola
- Department of Science and High Technology University of Insubria Via Valleggio 9 22100 Como Italy
| | - Gianfranco Gilardi
- Department of Life Sciences and Systems Biology University of Turin Via Accademia Albertina 13 10123 Torino Italy
| | - Elena Rosini
- Department of Biotechnology and Life Sciences University of Insubria Via J. H. Dunant 3 21100 Varese Italy
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11
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Li T, Chen C, Brozena AH, Zhu JY, Xu L, Driemeier C, Dai J, Rojas OJ, Isogai A, Wågberg L, Hu L. Developing fibrillated cellulose as a sustainable technological material. Nature 2021; 590:47-56. [PMID: 33536649 DOI: 10.1038/s41586-020-03167-7] [Citation(s) in RCA: 394] [Impact Index Per Article: 131.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 10/06/2020] [Indexed: 01/30/2023]
Abstract
Cellulose is the most abundant biopolymer on Earth, found in trees, waste from agricultural crops and other biomass. The fibres that comprise cellulose can be broken down into building blocks, known as fibrillated cellulose, of varying, controllable dimensions that extend to the nanoscale. Fibrillated cellulose is harvested from renewable resources, so its sustainability potential combined with its other functional properties (mechanical, optical, thermal and fluidic, for example) gives this nanomaterial unique technological appeal. Here we explore the use of fibrillated cellulose in the fabrication of materials ranging from composites and macrofibres, to thin films, porous membranes and gels. We discuss research directions for the practical exploitation of these structures and the remaining challenges to overcome before fibrillated cellulose materials can reach their full potential. Finally, we highlight some key issues towards successful manufacturing scale-up of this family of materials.
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Affiliation(s)
- Tian Li
- Department of Materials Science and Engineering, University of Maryland, College Park, MD, USA.,Center for Materials Innovation, University of Maryland, College Park, MD, USA
| | - Chaoji Chen
- Department of Materials Science and Engineering, University of Maryland, College Park, MD, USA.,Center for Materials Innovation, University of Maryland, College Park, MD, USA
| | - Alexandra H Brozena
- Department of Materials Science and Engineering, University of Maryland, College Park, MD, USA
| | - J Y Zhu
- USDA Forest Products Laboratory, Madison, WI, USA
| | - Lixian Xu
- Sappi Biotech, Maastricht, The Netherlands
| | - Carlos Driemeier
- Brazilian Biorenewables National Laboratory (LNBR), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Brazil
| | - Jiaqi Dai
- Inventwood LLC, College Park, MD, USA
| | - Orlando J Rojas
- Bioproducts Institute, Departments of Chemical and Biological Engineering, Chemistry and Wood Science, The University of British Columbia, Vancouver, British Columbia, Canada.,Department of Bioproducts and Biosystems, Aalto University, Espoo, Finland
| | - Akira Isogai
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Lars Wågberg
- Department of Fibre and Polymer Technology and Wallenberg Wood Science Centre, KTH Royal Institute of Technology, Stockholm, Sweden
| | - Liangbing Hu
- Department of Materials Science and Engineering, University of Maryland, College Park, MD, USA. .,Center for Materials Innovation, University of Maryland, College Park, MD, USA.
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12
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Kaushik S, Thungon PD, Goswami P. Silk Fibroin: An Emerging Biocompatible Material for Application of Enzymes and Whole Cells in Bioelectronics and Bioanalytical Sciences. ACS Biomater Sci Eng 2020; 6:4337-4355. [PMID: 33455178 DOI: 10.1021/acsbiomaterials.9b01971] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Enzymes and whole cells serve as the active biological entities in a myriad of applications including bioprocesses, bioanalytics, and bioelectronics. Conserving the natural activity of these functional biological entities during their prolonged use is one of the major goals for validating their practical applications. Silk fibroin (SF) has emerged as a biocompatible material to interface with enzymes as well as whole cells. These biomaterials can be tailored both physically and chemically to create excellent scaffolds of different forms such as fibers, films, and powder for immobilization and stabilization of enzymes. The secondary structures of the SF-protein can be attuned to generate hydrophobic/hydrophilic pockets suitable to create the biocompatible microenvironments. The fibrous nature of the SF protein with a dominant hydrophobic property may also serve as an excellent support for promoting cellular adhesion and growth. This review compiles and discusses the recent literature on the application of SF as a biocompatible material at the interface of enzymes and cells in various fields, including the emerging area of bioelectronics and bioanalytical sciences.
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Affiliation(s)
- Sharbani Kaushik
- Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43201, United States
| | - Phurpa Dema Thungon
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
| | - Pranab Goswami
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
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Mehrjou B, Mo S, Dehghan-Baniani D, Wang G, Qasim AM, Chu PK. Antibacterial and Cytocompatible Nanoengineered Silk-Based Materials for Orthopedic Implants and Tissue Engineering. ACS APPLIED MATERIALS & INTERFACES 2019; 11:31605-31614. [PMID: 31385497 DOI: 10.1021/acsami.9b09066] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Many postsurgical complications stem from bacteria colony formation on the surface of implants, but the usage of antibiotic agents may cause antimicrobial resistance. Therefore, there is a strong demand for biocompatible materials with an intrinsic antibacterial resistance not requiring extraneous chemical agents. In this study, homogeneous nanocones were fabricated by oxygen plasma etching on the surface of natural, biocompatible Bombyx mori silk films. The new hydroxyl bonds formed on the surface of the nanopatterned film by plasma etching increased the surface energy by around 176%. This hydrophilic nanostructure reduced the bacterial attachment by more than 90% for both Gram-negative (Escherichia coli) and Gram-positive (Staphylococcus aureus) bacteria and at the same time improved the proliferation of osteoblast cells by 30%. The nanoengineered substrate and pristine silk were cultured for 6 h with three different bacteria concentrations of 107, 105, and 103 CFU mL-1 and the cell proliferation on the nanopatterned samples was significantly higher due to limited bacteria attachment and prevention of biofilm formation. The concept and materials described here reveal a promising alternative to produce biomaterials with an inherent biocompatibility and bacterial resistance simultaneously to mitigate postsurgical infections and minimize the use of antibiotics.
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Affiliation(s)
- Babak Mehrjou
- Department of Physics, Department of Materials Science and Engineering, and Department of Biomedical Engineering , City University of Hong Kong , Tat Chee Avenue , Kowloon , Hong Kong
| | - Shi Mo
- Department of Physics, Department of Materials Science and Engineering, and Department of Biomedical Engineering , City University of Hong Kong , Tat Chee Avenue , Kowloon , Hong Kong
| | - Dorsa Dehghan-Baniani
- Division of Biomedical Engineering, Department of Chemical and Biological Engineering , The Hong Kong University of Science and Technology , Sai Kung , Hong Kong
| | - Guomin Wang
- Department of Physics, Department of Materials Science and Engineering, and Department of Biomedical Engineering , City University of Hong Kong , Tat Chee Avenue , Kowloon , Hong Kong
| | - Abdul Mateen Qasim
- Department of Physics, Department of Materials Science and Engineering, and Department of Biomedical Engineering , City University of Hong Kong , Tat Chee Avenue , Kowloon , Hong Kong
| | - Paul K Chu
- Department of Physics, Department of Materials Science and Engineering, and Department of Biomedical Engineering , City University of Hong Kong , Tat Chee Avenue , Kowloon , Hong Kong
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van Zyl EM, Coburn JM. Hierarchical structure of bacterial-derived cellulose and its impact on biomedical applications. Curr Opin Chem Eng 2019. [DOI: 10.1016/j.coche.2019.04.005] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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15
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Zhang Y, Ren T, He J, Tian H, Jin B. Acute heavy metal toxicity test based on bacteria-hydrogel. Colloids Surf A Physicochem Eng Asp 2019. [DOI: 10.1016/j.colsurfa.2018.12.016] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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16
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Gilbert C, Ellis T. Biological Engineered Living Materials: Growing Functional Materials with Genetically Programmable Properties. ACS Synth Biol 2019; 8:1-15. [PMID: 30576101 DOI: 10.1021/acssynbio.8b00423] [Citation(s) in RCA: 111] [Impact Index Per Article: 22.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Natural biological materials exhibit remarkable properties: self-assembly from simple raw materials, precise control of morphology, diverse physical and chemical properties, self-repair, and the ability to sense-and-respond to environmental stimuli. Despite having found numerous uses in human industry and society, the utility of natural biological materials is limited. But, could it be possible to genetically program microbes to create entirely new and useful biological materials? At the intersection between microbiology, material science, and synthetic biology, the emerging field of biological engineered living materials (ELMs) aims to answer this question. Here we review recent efforts to program cells to produce living materials with novel functional properties, focusing on microbial systems that can be engineered to grow materials and on new genetic circuits for pattern formation that could be used to produce the more complex systems of the future.
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Affiliation(s)
- Charlie Gilbert
- Centre for Synthetic Biology, Imperial College London, London SW7 2AZ, U.K
- Department of Bioengineering, Imperial College London, London SW7 2AZ, U.K
| | - Tom Ellis
- Centre for Synthetic Biology, Imperial College London, London SW7 2AZ, U.K
- Department of Bioengineering, Imperial College London, London SW7 2AZ, U.K
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Dai B, Wang L, Wang Y, Yu G, Huang X. Single-Cell Nanometric Coating Towards Whole-Cell-Based Biodevices and Biosensors. ChemistrySelect 2018. [DOI: 10.1002/slct.201800963] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Bing Dai
- School of Technology; Harbin University; Harbin 150086 China
| | - Lei Wang
- MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and Storage; School of Chemistry and Chemical Engineering; Harbin Institute of Technology; Harbin 150001 China
| | - Yan Wang
- Departament de Química Inorgànica; Facultat de Química; Universitat de Barcelona, C/Martí i Franquès 1-11; Barcelona 08028 Spain
| | - Guangbin Yu
- School of Mechanical and Power Engineering; Harbin University of Science and Technology; Harbin 150080 China
| | - Xin Huang
- MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and Storage; School of Chemistry and Chemical Engineering; Harbin Institute of Technology; Harbin 150001 China
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Habimana JDD, Ji J, Sun X. Minireview: Trends in Optical-Based Biosensors for Point-Of-Care Bacterial Pathogen Detection for Food Safety and Clinical Diagnostics. ANAL LETT 2018. [DOI: 10.1080/00032719.2018.1458104] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Jean de Dieu Habimana
- State Key Laboratory of Food Science and Technology, School of Food Science, National Engineering Research Center for Functional Foods, Synergetic Innovation Center of Food Safety, International Joint Laboratory on Food Safety, Jiangnan University, Wuxi, Jiangsu, China
- Department of Food Science and Technology, School of Food Science and Technology, University of Rwanda, Kigali, Rwanda
| | - Jian Ji
- State Key Laboratory of Food Science and Technology, School of Food Science, National Engineering Research Center for Functional Foods, Synergetic Innovation Center of Food Safety, International Joint Laboratory on Food Safety, Jiangnan University, Wuxi, Jiangsu, China
| | - Xiulan Sun
- State Key Laboratory of Food Science and Technology, School of Food Science, National Engineering Research Center for Functional Foods, Synergetic Innovation Center of Food Safety, International Joint Laboratory on Food Safety, Jiangnan University, Wuxi, Jiangsu, China
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