1
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Yan S, Yuan Z, Qian H, Dai Y, Sun B, Jiang P, Guo Y, Fang W. Advanced magnetic nanospheres for oil pollutant management: Dual roles in emulsification and demulsification. JOURNAL OF HAZARDOUS MATERIALS 2024; 480:136026. [PMID: 39368361 DOI: 10.1016/j.jhazmat.2024.136026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2024] [Revised: 09/19/2024] [Accepted: 09/30/2024] [Indexed: 10/07/2024]
Abstract
Environmental contamination from oil spills and industrial oily wastewater poses significant ecological risks due to the persistence of harmful organic compounds. To address these challenges, magnetic composite nanospheres (CMNP@CHPEI) are systematically developed, with carboxylated Fe3O4 nanoparticles (CMNP) as the core and amphiphilic hyperbranched polyethyleneimine (CHPEI) as the decorated shell. These novel nanospheres combine the controllable size and magnetic responsiveness of "hard" magnetic nanomaterials with the structural complexity and functional diversity of "soft" hyperbranched polymers. This design allows for switching between emulsification and demulsification behaviors by regulating the size of the nanospheres and the amphiphilicity of CHPEI. Specifically, the nanospheres can form Pickering emulsions with oil droplet sizes smaller than 1 µm, maintaining stability for up to 75 days, and achieve rapid oil-water separation with demulsification efficiencies up to 99.8 %. Even after seven recycling experiments, they still retain significant interfacial activity and applicability. Interfacial characteristic experiments and molecular dynamics simulations reveal that particle size directly affects the film structures formed at oil-water interface, while the amphiphilic functional molecules determine the interaction mode of nanospheres with oil-water phases. These achievements introduce a versatile, environmentally friendly material for removing hazardous oil-based pollutants, with promising applications in oil spill remediation and industrial wastewater treatment.
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Affiliation(s)
- Shu Yan
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China; Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou 310058, China
| | - Zhiyuan Yuan
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
| | - Hehe Qian
- College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Yitong Dai
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China; Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou 310058, China
| | - Bin Sun
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
| | - Pengfei Jiang
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China; Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou 310058, China.
| | - Yongsheng Guo
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China; Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou 310058, China.
| | - Wenjun Fang
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China; Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou 310058, China
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2
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Shen D, Zhou Z, Xu Y, Shao C, Shi Y, Zhao W, Tang R, Pan H, Yu M, Hannig M, Fu B. Reversion of ACP Nanoparticles into Prenucleation Clusters via Surfactant for Promoting Biomimetic Mineralization: A Physicochemical Understanding of Biosurfactant Role in Biomineralization Process. Adv Healthc Mater 2024; 13:e2303488. [PMID: 38265149 DOI: 10.1002/adhm.202303488] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 11/21/2023] [Indexed: 01/25/2024]
Abstract
Amphiphilic biomolecules are abundant in mineralization front of biological hard tissues, which play a vital role in osteogenesis and dental hard tissue formation. Amphiphilic biomolecules function as biosurfactants, however, their biosurfactant role in biomineralization process has never been investigated. This study, for the first time, demonstrates that aggregated amorphous calcium phosphate (ACP) nanoparticles can be reversed into dispersed ultrasmall prenucleation clusters (PNCs) via breakdown and dispersion of the ACP nanoparticles by a surfactant. The reduced surface energy of ACP@TPGS and the electrostatic interaction between calcium ions and the pair electrons on oxygen atoms of C-O-C of D-α-tocopheryl polyethylene glycol succinate (TPGS) provide driving force for breakdown and dispersion of ACP nanoparticles into ultrasmall PNCs which promote in vitro and in vivo biomimetic mineralization. The ACP@TPGS possesses excellent biocompatibility without any irritations to oral mucosa and dental pulp. This study not only introduces surfactant into biomimetic mineralization field, but also excites attention to the neglected biosurfactant role during biomineralization process.
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Affiliation(s)
- Dongni Shen
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Zihuai Zhou
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Yuedan Xu
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Changyu Shao
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Ying Shi
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Weijia Zhao
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Ruikang Tang
- Center for Biomaterials and Biopathways, Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang Province, 310000, China
| | - Haihua Pan
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, Zhejiang Province, 310000, China
| | - Mengfei Yu
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
| | - Matthias Hannig
- Clinic of Operative Dentistry, Periodontology and Preventive Dentistry, Saarland University, 66424, Homburg, Saarland, Germany
| | - Baiping Fu
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Engineering Research Center of Oral Biomaterials and Devices of Zhejiang Province, Hangzhou, Zhejiang, 310000, China
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3
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Hue KY, Lew JH, Myo Thant MM, Matar OK, Luckham PF, Müller EA. Molecular Dynamics Simulation of Polyacrylamide Adsorption on Calcite. Molecules 2023; 28:6367. [PMID: 37687196 PMCID: PMC10563068 DOI: 10.3390/molecules28176367] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 08/21/2023] [Accepted: 08/28/2023] [Indexed: 09/10/2023] Open
Abstract
In poorly consolidated carbonate rock reservoirs, solids production risk, which can lead to increased environmental waste, can be mitigated by injecting formation-strengthening chemicals. Classical atomistic molecular dynamics (MD) simulation is employed to model the interaction of polyacrylamide-based polymer additives with a calcite structure, which is the main component of carbonate formations. Amongst the possible calcite crystal planes employed as surrogates of reservoir rocks, the (1 0 4) plane is shown to be the most suitable surrogate for assessing the interactions with chemicals due to its stability and more realistic representation of carbonate structure. The molecular conformation and binding energies of pure polyacrylamide (PAM), hydrolysed polyacrylamide in neutral form (HPAM), hydrolysed polyacrylamide with 33% charge density (HPAM 33%) and sulfonated polyacrylamide with 33% charge density (SPAM 33%) are assessed to determine the adsorption characteristics onto calcite surfaces. An adsorption-free energy analysis, using an enhanced umbrella sampling method, is applied to evaluate the chemical adsorption performance. The interaction energy analysis shows that the polyacrylamide-based polymers display favourable interactions with the calcite structure. This is attributed to the electrostatic attraction between the amide and carboxyl functional groups with the calcite. Simulations confirm that HPAM33% has a lower free energy than other polymers, presumably due to the presence of the acrylate monomer in ionised form. The superior chemical adsorption performance of HPAM33% agrees with Atomic Force Microscopy experiments reported herein.
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Affiliation(s)
- Keat Yung Hue
- Department of Chemical Engineering, Imperial College London, London SW7 2AZ, UK; (K.Y.H.); (J.H.L.); (O.K.M.); (P.F.L.)
| | - Jin Hau Lew
- Department of Chemical Engineering, Imperial College London, London SW7 2AZ, UK; (K.Y.H.); (J.H.L.); (O.K.M.); (P.F.L.)
| | - Maung Maung Myo Thant
- PETRONAS Research Sdn. Bhd., Lot 3288 & 3289, Off Jalan Ayer Itam, Kawasan Institusi Bangi, Kajang 43000, Selangor, Malaysia;
| | - Omar K. Matar
- Department of Chemical Engineering, Imperial College London, London SW7 2AZ, UK; (K.Y.H.); (J.H.L.); (O.K.M.); (P.F.L.)
| | - Paul F. Luckham
- Department of Chemical Engineering, Imperial College London, London SW7 2AZ, UK; (K.Y.H.); (J.H.L.); (O.K.M.); (P.F.L.)
| | - Erich A. Müller
- Department of Chemical Engineering, Imperial College London, London SW7 2AZ, UK; (K.Y.H.); (J.H.L.); (O.K.M.); (P.F.L.)
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Mousavi SZ, Shadman HR, Habibi M, Didandeh M, Nikzad A, Golmohammadi M, Maleki R, Suwaileh WA, Khataee A, Zargar M, Razmjou A. Elucidating the Sorption Mechanisms of Environmental Pollutants Using Molecular Simulation. Ind Eng Chem Res 2023. [DOI: 10.1021/acs.iecr.2c02333] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Affiliation(s)
- Seyedeh Zahra Mousavi
- Department of Chemical Engineering, Tarbiat Modares University, Tehran, 1411944961, Iran
| | - Hamid Reza Shadman
- Department of Polymer Engineering & Color Technology, Amirkabir University of Technology, Tehran, 6351713178, Iran
| | - Meysam Habibi
- Department of Chemical Engineering, University of Tehran, Tehran, 6718773654, Iran
| | - Mohsen Didandeh
- Department of Chemical Engineering, Tarbiat Modares University, Tehran, 1411944961, Iran
| | - Arash Nikzad
- Mechanical Engineering Department, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Mahsa Golmohammadi
- Department of Polymer Engineering & Color Technology, Amirkabir University of Technology, Tehran, 6351713178, Iran
| | - Reza Maleki
- Department of Chemical Technologies, Iranian Research Organization for Science and Technology (IROST), P.O. Box 33535111, Tehran, 3313193685, Iran
| | - Wafa Ali Suwaileh
- Chemical Engineering Program, Texas A&M University at Qatar, Education City, Doha 23874, Qatar
| | - Alireza Khataee
- Research Laboratory of Advanced Water and Wastewater Treatment Processes, Department of Applied Chemistry, Faculty of Chemistry, University of Tabriz, 51666-16471 Tabriz, Iran
- Department of Materials Science and Nanotechnology Engineering, Faculty of Engineering, Near East University, 99138 Nicosia, Mersin 10 Turkey
| | - Masoumeh Zargar
- Mineral Recovery Research Center (MRRC), School of Engineering, Edith Cowan University, Joondalup, Perth WA 6027, Australia
| | - Amir Razmjou
- Mineral Recovery Research Center (MRRC), School of Engineering, Edith Cowan University, Joondalup, Perth WA 6027, Australia
- UNESCO Centre for Membrane Science and Technology, School of Chemical Engineering, University of New South Wales, Sydney, NSW 2052, Australia
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5
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Cappabianca R, De Angelis P, Cardellini A, Chiavazzo E, Asinari P. Assembling Biocompatible Polymers on Gold Nanoparticles: Toward a Rational Design of Particle Shape by Molecular Dynamics. ACS OMEGA 2022; 7:42292-42303. [PMID: 36440134 PMCID: PMC9686196 DOI: 10.1021/acsomega.2c05218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 10/26/2022] [Indexed: 06/16/2023]
Abstract
Gold nanoparticles (AuNPs) have received great attention in a number of fields ranging from the energy sector to biomedical applications. As far as the latter is concerned, due to rapid renal clearance and a short lifetime in blood, AuNPs are often encapsulated in a poly(lactic-co-glycolic acid) (PLGA) matrix owing to its biocompatibility and biodegradability. A better understanding of the PLGA polymers on the AuNP surface is crucial to improve and optimize the above encapsulation process. In this study, we combine a number of computational approaches to explore the adsorption mechanisms of PLGA oligomers on a Au crystalline NP and to rationalize the PLGA coating process toward a more efficient design of the NP shape. Atomistic simulations supported by a recently developed unsupervised machine learning scheme show the temporal evolution and behavior of PLGA clusterization by tuning the oligomer concentration in aqueous solutions. Then, a detailed surface coverage analysis coupled with free energy landscape calculations sheds light on the anisotropic nature of PLGA adsorption onto the AuNP. Our results prove that the NP shape and topology may address and privilege specific sites of adsorption, such as the Au {1 1 1} crystal planes in selected NP samples. The modeling-based investigation suggested in this article offers a solid platform to guide the design of coated NPs.
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Affiliation(s)
- Roberta Cappabianca
- Department
of Energy “Galileo Ferraris”, Politecnico di Torino, Corso Duca Degli Abruzzi 24, 10129Torino, Italy
| | - Paolo De Angelis
- Department
of Energy “Galileo Ferraris”, Politecnico di Torino, Corso Duca Degli Abruzzi 24, 10129Torino, Italy
| | - Annalisa Cardellini
- Department
of Energy “Galileo Ferraris”, Politecnico di Torino, Corso Duca Degli Abruzzi 24, 10129Torino, Italy
| | - Eliodoro Chiavazzo
- Department
of Energy “Galileo Ferraris”, Politecnico di Torino, Corso Duca Degli Abruzzi 24, 10129Torino, Italy
| | - Pietro Asinari
- Department
of Energy “Galileo Ferraris”, Politecnico di Torino, Corso Duca Degli Abruzzi 24, 10129Torino, Italy
- Istituto
Nazionale di Ricerca Metrologica, Strada Delle Cacce 91, 10135Torino, Italy
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6
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7
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Mohr S, Pétuya R, Sarria J, Purkayastha N, Bodnar S, Wylde J, Tsimpanogiannis IN. Assessing the effect of a liquid water layer on the adsorption of hydrate anti-agglomerants using molecular simulations. J Chem Phys 2022; 157:094703. [DOI: 10.1063/5.0100260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We have performed Molecular Dynamics simulations to study the adsorption of ten hydrate anti-agglomerants onto a mixed methane-propane sII hydrate surface covered by layers of liquid water of various thickness. As a general trend, we found that the more liquid water is present on the hydrate surface the less favorable the adsorption becomes, even though there are considerable differences between the individual molecules, indicating that the presence and thickness of this liquid water layer is a crucial parameter for anti-agglomerant adsorption studies. Additionally, we found that there exists an optimal thickness of the liquid water layer favoring hydrate growth due to the presence of both liquid water and hydrate-forming guest molecules. For all other cases of liquid water layer thickness, hydrate growth is slower due to the limited availability of hydrate-forming guests close to the hydrate formation front. Finally, we investigated the connection between the thickness of the liquid water layer and the degree of subcooling, and found a very good agreement between our Molecular Dynamics simulations and theoretical predictions.
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Affiliation(s)
| | | | | | | | - Scot Bodnar
- Clariant Oil Services, United States of America
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8
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Ginzburg VV. Mesoscale Modeling of Micellization and Adsorption of Surfactants and Surfactant-Like Polymers in Solution: Challenges and Opportunities. Ind Eng Chem Res 2022. [DOI: 10.1021/acs.iecr.2c01512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Valeriy V. Ginzburg
- Department of Chemical Engineering and Materials Science, Michigan State University, 428 S. Shaw Lane, Room 2100, East Lansing, Michigan 48824-1226, United States
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9
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Karimi K, Rahsepar M. Optimization of the Urea Removal in a Wearable Dialysis Device Using Nitrogen-Doped and Phosphorus-Doped Graphene. ACS OMEGA 2022; 7:4083-4094. [PMID: 35155902 PMCID: PMC8829914 DOI: 10.1021/acsomega.1c05495] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 01/12/2022] [Indexed: 05/31/2023]
Abstract
Dialysis has been recognized as an essential treatment for end-stage renal disease (ESRD). This therapy, however, suffers from several limitations leading to numerous complications in the patients. As dialysis cannot completely substitute healthy kidney functions, the health condition of an ESRD patient is ultimately affected. Wearable artificial kidney (WAK) can resolve the restrictions of blood purification by the dialysis method. However, absorbing large amounts of urea produced in the body is one of the main challenges of these WAK and overcoming this is necessary to improve both functionality and footprint of the device. This study investigates the adsorption capabilities of N- and P-doped graphene nanosorbents for the first time by using molecular dynamic simulation. Urea removal on carbon nanosheets was simulated with different percentages of phosphorus and nitrogen dopants along with the pristine graphene. Specifically, the effects of interaction energy, adsorption percentage, gyration radius, hydrogen bonding, and other molecular dynamic analyses on urea removal were also investigated. The results from this study match well with the existing research, demonstrating the accuracy of the model. The results further suggest that graphene nanosheets doped by 10% nitrogen are likely the most effective in removing urea given that it is associated with the maximum radial distribution function (RDF), the maximum reduction in gyration radius, a high number of hydrogen bonds, and the most negative adsorption energy. This molecular study offers attractive suggestions for the novel adsorbents of artificial kidney devices and paves the way for the development of novel and enhanced urea adsorbents.
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Affiliation(s)
- Keyvan Karimi
- Department of Materials Science
and Engineering, School of Engineering, Shiraz University, Zand Boulevard, Shiraz 7134851154, Iran
| | - Mansour Rahsepar
- Department of Materials Science
and Engineering, School of Engineering, Shiraz University, Zand Boulevard, Shiraz 7134851154, Iran
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10
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Acero PN, Mohr S, Bernabei M, Fernández C, Domínguez B, Ewen JP. Molecular Simulations of Surfactant Adsorption on Iron Oxide from Hydrocarbon Solvents. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:14582-14596. [PMID: 34878282 DOI: 10.1021/acs.langmuir.1c02133] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The performance of organic friction modifiers (OFMs) depends on their ability to adsorb onto surfaces and form protective monolayers. Understanding the relationship between OFM concentration in the base oil and the resulting surface coverage is important for improving lubricant formulations. Here, we use molecular dynamics (MD) simulations to study the adsorption of three OFMs─stearic acid (SA), glycerol monoostearate (GMS), and glycerol monooleate (GMO)─onto a hematite surface from two hydrocarbon solvents─n-hexadecane and poly(α-olefin) (PAO). We calculate the potential of mean force of the adsorption process using the adaptive biasing force algorithm, and the adsorption strength increases in the order SA < GMS < GMO. We estimate the minimum area occupied by OFM molecules on the surface using annealing MD simulations and obtained a similar hard-disk area for GMS and GMO but a lower value for SA. Using the MD results, we determine the adsorption isotherms using the molecular thermodynamic theory (MTT), which agree well with one previous experimental data set for SA on hematite. For two other experimental data sets for SA, lateral interactions between surfactant molecules need to be accounted for within the MTT framework. SA forms monolayers with lower surface coverage than GMO and GMS at low concentrations but also has the highest plateau coverage. We validate the adsorption energies from the MD simulations using high-frequency reciprocating rig friction experiments with different concentrations of the OFMs in PAO. For OFMs with saturated tailgroups (SA and GMS), we obtain good agreement between the simulations and the experiments. The results deviate for OFMs containing Z-unsaturated tailgroups (GMO) due to the additional steric hindrance, which is not accounted for in the current simulation framework. This study demonstrates that MD simulations, alongside MTT, are an accurate and efficient tool to predict adsorption isotherms at solid-liquid interfaces.
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Affiliation(s)
- Pablo Navarro Acero
- Nextmol (Bytelab Solutions SL), Carrer de Roc Boronat 117, 08 018 Barcelona, Spain
- Barcelona Supercomputing Center (BSC-CNS), Plaça Eusebi Güell, 1-3, 08 034 Barcelona, Spain
| | - Stephan Mohr
- Nextmol (Bytelab Solutions SL), Carrer de Roc Boronat 117, 08 018 Barcelona, Spain
- Barcelona Supercomputing Center (BSC-CNS), Plaça Eusebi Güell, 1-3, 08 034 Barcelona, Spain
| | - Marco Bernabei
- Repsol Technology Lab, DC Technology & Corporate Venturing, Agustín de Betancourt s/n, 28 935 Mostoles, Madrid, Spain
| | - Carlos Fernández
- Repsol Technology Lab, DC Technology & Corporate Venturing, Agustín de Betancourt s/n, 28 935 Mostoles, Madrid, Spain
| | - Beatriz Domínguez
- Repsol Technology Lab, DC Technology & Corporate Venturing, Agustín de Betancourt s/n, 28 935 Mostoles, Madrid, Spain
| | - James P Ewen
- Department of Mechanical Engineering, Imperial College London, South Kensington Campus, London SW7 2AZ, U.K
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Bag S, Rauwolf S, Schwaminger SP, Wenzel W, Berensmeier S. DNA Binding to the Silica: Cooperative Adsorption in Action. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:5902-5908. [PMID: 33951395 DOI: 10.1021/acs.langmuir.1c00381] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The adsorption and desorption of nucleic acid to a solid surface is ubiquitous in various research areas like pharmaceutics, nanotechnology, molecular biology, and molecular electronics. In spite of this widespread importance, it is still not well understood how the negatively charged deoxyribonucleic acid (DNA) binds to the negatively charged silica surface in an aqueous solution. In this article, we study the adsorption of DNA to the silica surface using both modeling and experiments and shed light on the complicated binding (DNA to silica) process. The binding agent mediated DNA adsorption was elegantly captured by cooperative Langmuir model. Bulk-depletion experiments were performed to conclude the necessity of a positively charged binding agent for efficient DNA binding, which complements the findings from the model. A profound understanding of DNA binding will help to tune various processes for efficient nucleic acid extraction and purification. However, this work goes beyond the DNA binding and can shed light on other binding agent mediated surface-surface, surface-molecule, molecule-molecule interaction.
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Affiliation(s)
- Saientan Bag
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz Platz-1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Stefan Rauwolf
- Bioseparation Engineering Group, Department of Mechanical Engineering, Technical University of Munich (TUM), Munich 85748, Germany
| | - Sebastian P Schwaminger
- Bioseparation Engineering Group, Department of Mechanical Engineering, Technical University of Munich (TUM), Munich 85748, Germany
| | - Wolfgang Wenzel
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz Platz-1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Sonja Berensmeier
- Bioseparation Engineering Group, Department of Mechanical Engineering, Technical University of Munich (TUM), Munich 85748, Germany
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12
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Wagner R, Bag S, Trunzer T, Fraga-García P, Wenzel W, Berensmeier S, Franzreb M. Adsorption of organic molecules on carbon surfaces: Experimental data and molecular dynamics simulation considering multiple protonation states. J Colloid Interface Sci 2021; 589:424-437. [DOI: 10.1016/j.jcis.2020.12.107] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Revised: 12/12/2020] [Accepted: 12/27/2020] [Indexed: 02/07/2023]
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13
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Ren K, Wang YP, Liu S. The role of solute polarity on methanol-silica interfacial solvation: a molecular dynamics study. Phys Chem Chem Phys 2021; 23:1092-1102. [PMID: 33346761 DOI: 10.1039/d0cp04422a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The solvation structure and dynamics of small organic molecules at the methanol-silica interface are important for understanding the reaction dynamics in heterogeneous catalysis as well as the transport mechanisms in liquid chromatography. The role of solute polarity in interfacial solvation at the methanol-silica interface has been investigated via umbrella sampling molecular dynamics (MD) simulations and 1,3-propanediol and n-pentane were selected as representative species of polar and apolar solutes. Free energy calculations reveal that it took a similar free energy cost to transfer both solute molecules from the interface to the bulk, despite the huge difference in their polarities. The 1,3-propendiol molecule can penetrate the adsorbed methanol layer and form hydrogen bonds with the silica surface with its backbone perpendicular to the silica surface, resulting in a significant slowdown of translational and rotational dynamics. Further analysis of solvent density and solute orientations suggest that at the minimum of the adsorption free energy curve, the 1,3-propanediol molecule is in a desolvated state, while n-pentane is in a solvated state. The collective effect of solute concentration has also been studied by unbiased MD simulations, and the free energy barriers of transferring the solute molecule from the interface to bulk, as well as the parallel diffusion coefficients at the interface, show a non-monotonic dependence on solute concentration, which can be related to the crowded environment in the interfacial layers.
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Affiliation(s)
- Kezhou Ren
- School of Materials Science and Engineering, Key Laboratory for Polymeric Composite & Functional Materials of Ministry of Education, Sun Yat-sen University, Guangzhou 510275, P. R. China.
| | - Yong-Peng Wang
- School of Materials Science and Engineering, Key Laboratory for Polymeric Composite & Functional Materials of Ministry of Education, Sun Yat-sen University, Guangzhou 510275, P. R. China.
| | - Shule Liu
- School of Materials Science and Engineering, Key Laboratory for Polymeric Composite & Functional Materials of Ministry of Education, Sun Yat-sen University, Guangzhou 510275, P. R. China.
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Bag S, Rauwolf S, Suyetin M, Schwaminger SP, Wenzel W, Berensmeier S. Buffer Influence on the Amino Acid Silica Interaction. Chemphyschem 2020; 21:2347-2356. [PMID: 32794279 PMCID: PMC7702087 DOI: 10.1002/cphc.202000572] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Revised: 08/11/2020] [Indexed: 12/11/2022]
Abstract
Protein-surface interactions are exploited in various processes in life sciences and biotechnology. Many of such processes are performed in presence of a buffer system, which is generally believed to have an influence on the protein-surface interaction but is rarely investigated systematically. Combining experimental and theoretical methodologies, we herein demonstrate the strong influence of the buffer type on protein-surface interactions. Using state of the art chromatographic experiments, we measure the interaction between individual amino acids and silica, as a reference to understand protein-surface interactions. Among all the 20 proteinogenic amino acids studied, we found that arginine (R) and lysine (K) bind most strongly to silica, a finding validated by free energy calculations. We further measured the binding of R and K at different pH in presence of two different buffers, MOPS (3-(N-morpholino)propanesulfonic acid) and TRIS (tris(hydroxymethyl)aminomethane), and find dramatically different behavior. In presence of TRIS, the binding affinity of R/K increases with pH, whereas we observe an opposite trend for MOPS. These results can be understood using a multiscale modelling framework combining molecular dynamics simulation and Langmuir adsorption model. The modelling approach helps to optimize buffer conditions in various fields like biosensors, drug delivery or bio separation engineering prior to the experiment.
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Affiliation(s)
- Saientan Bag
- Institute of Nanotechnology (INT)Karlsruhe Institute of Technology (KIT)KarlsruheGermany
| | - Stefan Rauwolf
- Bioseparation Engineering GroupDepartment of Mechanical EngineeringTechnical University of Munich(TUM)GarchingGermany
| | - Mikhail Suyetin
- Institute of Nanotechnology (INT)Karlsruhe Institute of Technology (KIT)KarlsruheGermany
| | - Sebastian P. Schwaminger
- Bioseparation Engineering GroupDepartment of Mechanical EngineeringTechnical University of Munich(TUM)GarchingGermany
| | - Wolfgang Wenzel
- Institute of Nanotechnology (INT)Karlsruhe Institute of Technology (KIT)KarlsruheGermany
| | - Sonja Berensmeier
- Bioseparation Engineering GroupDepartment of Mechanical EngineeringTechnical University of Munich(TUM)GarchingGermany
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15
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Xia Y, Zhou JJ, Gong YY, Li ZJ, Zeng EY. Strong influence of surfactants on virgin hydrophobic microplastics adsorbing ionic organic pollutants. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 265:115061. [PMID: 32599333 DOI: 10.1016/j.envpol.2020.115061] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 06/16/2020] [Accepted: 06/16/2020] [Indexed: 06/11/2023]
Abstract
Microplastic (MP) pollution has become an area of increasing concern because MPs accumulate various types of pollutants. Many previous studies have explored the interactions between MPs and hydrophobic pollutants. However, little research has been conducted on hydrophilic pollutants, which are of much higher concentration and ubiquitous in environment. Surfactants cause hydrophobic MPs to become hydrophilic, which may significantly enhance their capacities to adsorb hydrophilic pollutants. This study explored the influence of co-existing surfactants on the adsorption of ionic organic pollutants by MPs, and found that the presence of an ionic surfactant could significantly enhance the capacity of polyvinyl chloride (PVC, 0.2 mm) MPs to adsorb pollutants with opposite charges. The Langmuir methylene blue adsorption capacity of PVC could be increased from 172 to 4417 ppm in the presence of a sodium dodecyl benzene sulfonate surfactant. Nonionic surfactants impeded the adsorption of both cationic and anionic pollutants due to the steric resistance of the hydrophilic polyethelene glycol chains. The electrostatic interaction mechanism dominated the interfacial behaviors of ionic pollutants on surfactant-adsorbed MP interfaces. The effects of the surfactants were further verified using four different model pollutants and six surfactants. The adsorption capacities of real environmental MPs, including PVC, polyethylene (PE), polypropylene (PP), and polystyrene (PS), increased by three to twenty-six times. The adsorption properties of MPs may be determined by the presence of co-existing surfactants, rather than their polymer species or additives.
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Affiliation(s)
- Yan Xia
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 510632, China
| | - Juan-Juan Zhou
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 510632, China
| | - Yan-Yan Gong
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 510632, China
| | - Zhan-Jun Li
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 510632, China.
| | - Eddy Y Zeng
- Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 510632, China
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16
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Jami L, Zemb T, Casas J, Dufrêche JF. How Adsorption of Pheromones on Aerosols Controls Their Transport. ACS CENTRAL SCIENCE 2020; 6:1628-1638. [PMID: 32999938 PMCID: PMC7517414 DOI: 10.1021/acscentsci.0c00892] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Indexed: 05/28/2023]
Abstract
We propose a general transport theory for pheromone molecules in an atmosphere containing aerosols. Many pheromones are hydrophobic molecules containing polar groups. They are low volatile and have some properties similar to those of hydrotropes. They therefore form a nonsoluble film at the water-air interface of aerosols. The fate of a small pheromone puff in air is computed through reaction-diffusion equations. Partitioning of pheromones between the gas and the aerosol surface over time is studied for various climate conditions (available aerosol surface) and adsorption affinities (energy of adsorption). We show that, for adsorption energy above 30 k B T per molecule, transport of pheromones on aerosols dominates over molecular transport typically 10 s after pheromone emission, even when few adsorbing aerosols are present. This new communication path for airborne chemicals leads to distinctive features including enhanced signal sensibility and increased persistence of pheromone concentration in the air due to slow diffusion of aerosols. Each aerosol droplet has the ability to adsorb thousands of pheromones to the surface, keeping a "history" of the atmospheric content between emission and reception. This new mechanism of pheromone transport leads to dramatic consequences on insect sensing revisiting the way we figure the capture of chemical signals.
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Affiliation(s)
- Ludovic Jami
- ICSM,
CEA, CNRS, ENSCM, Univ Montpellier, Marcoule, 30207 Bagnols-sur-Cèze, France
| | - Thomas Zemb
- ICSM,
CEA, CNRS, ENSCM, Univ Montpellier, Marcoule, 30207 Bagnols-sur-Cèze, France
| | - Jérôme Casas
- Institut
de Recherche sur la Biologie de l’Insecte, UMR 7261, CNRS—Université de Tours, 37200 Tours, France
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17
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Li L, Wu Z, Zhu H, Robinson GH, Xie Y, Schaefer HF. Reduction of Dinitrogen via 2,3′-Bipyridine-Mediated Tetraboration. J Am Chem Soc 2020; 142:6244-6250. [DOI: 10.1021/jacs.0c00409] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Longfei Li
- College of Pharmacy, Hebei University, Baoding 071002, Hebei People’s Republic of China
| | - Zeyu Wu
- College of Pharmacy, Hebei University, Baoding 071002, Hebei People’s Republic of China
| | - Huajie Zhu
- College of Pharmacy, Hebei University, Baoding 071002, Hebei People’s Republic of China
| | - Gregory H. Robinson
- Department of Chemistry and Center for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Yaoming Xie
- Department of Chemistry and Center for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Henry F. Schaefer
- Department of Chemistry and Center for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
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