1
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Belluati A, Bloch A, Koynov K, Müller Nieva M, Bagherabadi M, Andrieu-Brunsen A, Kolmar H, Bruns N. Characterization and Optimization of Vesicle Properties in bioPISA: from Size Distribution to Post-Assembly Loading. Adv Biol (Weinh) 2024:e2400483. [PMID: 39692631 DOI: 10.1002/adbi.202400483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2024] [Revised: 11/10/2024] [Indexed: 12/19/2024]
Abstract
This study investigates the formation and properties of vesicles produced via biocatalytic Polymerization-Induced Self-Assembly (bioPISA) as artificial cells. Methods for achieving size uniformity, including gentle centrifugation and sucrose gradient centrifugation, are explored, and the effects of stirring speed on vesicle morphology is investigated. The internal structure of the vesicles, characterized by a polymer-rich matrix, is analyzed using fluorescence correlation spectroscopy (FCS). Additionally, the feasibility of loading macromolecules into pre-formed vesicles is demonstrated using electroporation, and a fluorescent protein as well as enzymes for a cascade reaction were sucesfully incorporated into the fully assembled polymersomes. These findings provide a foundation for developing enzyme-synthesized polymeric vesicles with controlled morphologies for various applications, e.g., in synthetic biology.
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Affiliation(s)
- Andrea Belluati
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, 295 Cathedral Street, Glasgo, G1 1XL, UK
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
- Centre for Synthetic Biology, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Adrian Bloch
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Kaloian Koynov
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Mariana Müller Nieva
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Mohadeseh Bagherabadi
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Annette Andrieu-Brunsen
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Harald Kolmar
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
| | - Nico Bruns
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, 295 Cathedral Street, Glasgo, G1 1XL, UK
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
- Centre for Synthetic Biology, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287, Darmstadt, Germany
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2
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Anderson IC, Gomez DC, Zhang M, Koehler SJ, Figg CA. Catalyzing PET-RAFT Polymerizations Using Inherently Photoactive Zinc Myoglobin. Angew Chem Int Ed Engl 2024:e202414431. [PMID: 39468874 DOI: 10.1002/anie.202414431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Indexed: 10/30/2024]
Abstract
Protein photocatalysts provide a modular platform to access new reaction pathways and affect product outcomes, but their use in polymer synthesis is limited because co-catalysts and/or co-reductants are required to complete catalytic cycles. Herein, we report using zinc myoglobin (ZnMb), an inherently photoactive protein, to mediate photoinduced electron/energy transfer (PET) reversible addition-fragmentation chain transfer (RAFT) polymerizations. Using ZnMb as the sole reagent for catalysis, photomediated polymerizations of N,N-dimethylacrylamide in PBS were achieved with predictable molecular weights, dispersity values approaching 1.1, and high chain-end fidelity. We found that initial apparent rate constants of polymerization increased from 4.6×10-5 s-1 for zinc mesoporpyhrin IX (ZnMIX) to 6.5×10-5 s-1 when ZnMIX was incorporated into myoglobin to yield ZnMb, indicating that the protein binding site enhanced catalytic activity. Chain extension reactions comparing ZnMb-mediated RAFT polymerizations to thermally-initiated RAFT polymerizations showed minimal differences in block copolymer molecular weights and dispersities. This work enables studies to elucidate how protein modifications (e.g., secondary structure folding, site-directed mutagenesis, directed evolution) can be used to modulate polymerization outcomes (e.g., selective monomer additions towards sequence control, tacticity control, molar mass distributions).
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Affiliation(s)
- Ian C Anderson
- Department of Chemistry and Macromolecular Innovation Institute, Virginia Tech, Blacksburg, Virginia, 24061, United States of America
| | - Darwin C Gomez
- Department of Chemistry and Macromolecular Innovation Institute, Virginia Tech, Blacksburg, Virginia, 24061, United States of America
| | - Meijing Zhang
- Department of Chemistry and Macromolecular Innovation Institute, Virginia Tech, Blacksburg, Virginia, 24061, United States of America
| | - Stephen J Koehler
- Department of Chemistry and Macromolecular Innovation Institute, Virginia Tech, Blacksburg, Virginia, 24061, United States of America
| | - C Adrian Figg
- Department of Chemistry and Macromolecular Innovation Institute, Virginia Tech, Blacksburg, Virginia, 24061, United States of America
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3
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Chen Y, Lu Y, Hua K, Li J, Zheng J, Pan Y, Du Y, Zhang Q, Li W. Intracellular Generation of Alkyl Radicals Enabled by a Self-Catalytic ATRP Nanoinitiator. ACS Macro Lett 2024; 13:1233-1239. [PMID: 39258749 DOI: 10.1021/acsmacrolett.4c00306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/12/2024]
Abstract
Oxygen-independent alkyl radicals (R•) have demonstrated great promise in combating tumor hypoxia. Currently, Azo compounds have been the primary source of R•, suffering from external stimuli and decomposition during circulation. Herein, we developed a self-catalytic ATRP nanoinitiator that could generate R• via glutathione (GSH) reduction and thus selectively induce apoptosis of tumor cells. Specifically, a conjugation of laccase (possessing a copper(II) complex) and polymeric alkyl bromide, poly(iBBr), was fabricated to yield an ATRP nanoinitiator (Lac-P(iBBr)). After internalization by cells featured with overexpressed GSH, copper(II) in Lac-P(iBBr) was reduced to copper(I) by GSH, which abstracted the Br atom in poly(iBBr) to yield toxic R•. Moreover, GSH-depletion intensified the oxidative damage caused by R•. Efficient generation of R• by Lac-P(iBBr) could happen in lab flasks, living cells, and tumor-bearing mice without any external stimuli, as demonstrated by the radical product, as well as the consumption of GSH. Moreover, the self-catalytic ATRP nanoinitiator significantly induced cell apoptosis and suppressed tumor growth. Our study expands the chemical toolbox to manipulate cell fates.
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Affiliation(s)
- Yubin Chen
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Yao Lu
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Kai Hua
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Junyan Li
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Jingtao Zheng
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Yanyan Pan
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Yongzhong Du
- National Key Laboratory of Advanced Drug Delivery and Release Systems, Shandong Luye Pharmaceutical Co., Ltd., Yantai, Shandong 264003, China
| | - Qiang Zhang
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
| | - Weishuo Li
- Center for Molecular Metabolism, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiao Ling Wei Street, Nanjing, 210094, China
- National Key Laboratory of Advanced Drug Delivery and Release Systems, Shandong Luye Pharmaceutical Co., Ltd., Yantai, Shandong 264003, China
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4
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Ma N, Wang S, Liu M, Zhu H, Liu Q, Kong J, Zhang T. Controllable radical polymerization of TEMPO redox for stable and sensitive enzyme electrode interface. Biosens Bioelectron 2024; 259:116417. [PMID: 38795496 DOI: 10.1016/j.bios.2024.116417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 04/25/2024] [Accepted: 05/20/2024] [Indexed: 05/28/2024]
Abstract
Assembling functional molecules on the surface of an enzyme electrode is the most basic technique for constructing a biosensor. However, precise control of electron transfer interface or electron mediator on the electrode surface remains a challenge, which is a key step that affects the stability and sensitivity of enzyme-based biosensors. In this study, we propose the use of controllable free radical polymerization to grow stable 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO) polymer as electron mediator on enzyme surface for the first time. Through scanning electron microscopy (SEM), Raman spectroscopy, electrode surface coverage measurement, static contact angle (SCA), and a series of electrochemical methods, it has been demonstrated that the TEMPO-based enzyme electrode exhibits a uniform hydrophilic morphology and stable electrochemical performance. Furthermore, the results show that the sensor demonstrates high sensitivity for detecting glucose biomolecules in artificial sweat and serum. Attributing to the quantitative and controllable radical polymerization of TEMPO redox assembled enzyme electrode surface, the as-proposed biosensor providing a use, storage, and inter-batch sensing stability, providing a vital platform for wearable/implantable biochemical sensors.
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Affiliation(s)
- Nan Ma
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China; School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiaolingwei Road, Nanjing, Jiangsu, 210094, PR China
| | - Shuqi Wang
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China.
| | - Mengyuan Liu
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China; School of Nano-Tech and Nano-Bionics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, PR China
| | - Hao Zhu
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China
| | - Qianzuo Liu
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China
| | - Jinming Kong
- School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiaolingwei Road, Nanjing, Jiangsu, 210094, PR China.
| | - Ting Zhang
- I-Lab, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu 215123, PR China; School of Nano-Tech and Nano-Bionics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, PR China; Nano-X Vacuum Interconnected Workstation, Key Laboratory of Multifunctional Nanomaterials and Smart Systems, Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Chinese Academy of Sciences (CAS), 398 Ruoshui Road, Suzhou, Jiangsu, 215123, PR China.
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5
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Belluati A, Jimaja S, Chadwick RJ, Glynn C, Chami M, Happel D, Guo C, Kolmar H, Bruns N. Artificial cell synthesis using biocatalytic polymerization-induced self-assembly. Nat Chem 2024; 16:564-574. [PMID: 38049652 PMCID: PMC10997521 DOI: 10.1038/s41557-023-01391-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 10/30/2023] [Indexed: 12/06/2023]
Abstract
Artificial cells are biomimetic microstructures that mimic functions of natural cells, can be applied as building blocks for molecular systems engineering, and host synthetic biology pathways. Here we report enzymatically synthesized polymer-based artificial cells with the ability to express proteins. Artificial cells were synthesized using biocatalytic atom transfer radical polymerization-induced self-assembly, in which myoglobin synthesizes amphiphilic block co-polymers that self-assemble into structures such as micelles, worm-like micelles, polymersomes and giant unilamellar vesicles (GUVs). The GUVs encapsulate cargo during the polymerization, including enzymes, nanoparticles, microparticles, plasmids and cell lysate. The resulting artificial cells act as microreactors for enzymatic reactions and for osteoblast-inspired biomineralization. Moreover, they can express proteins such as a fluorescent protein and actin when fed with amino acids. Actin polymerizes in the vesicles and alters the artificial cells' internal structure by creating internal compartments. Thus, biocatalytic atom transfer radical polymerization-induced self-assembly-derived GUVs can mimic bacteria as they are composed of a microscopic reaction compartment that contains genetic information for protein expression upon induction.
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Affiliation(s)
- Andrea Belluati
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, Glasgow, UK.
- Department of Chemistry and Centre for Synthetic Biology, Technical University of Darmstadt, Darmstadt, Germany.
| | - Sètuhn Jimaja
- Adolphe Merkle Institute, University of Fribourg, Fribourg, Switzerland
| | - Robert J Chadwick
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, Glasgow, UK
| | - Christopher Glynn
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, Glasgow, UK
| | | | - Dominic Happel
- Department of Chemistry and Centre for Synthetic Biology, Technical University of Darmstadt, Darmstadt, Germany
| | - Chao Guo
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, Glasgow, UK
| | - Harald Kolmar
- Department of Chemistry and Centre for Synthetic Biology, Technical University of Darmstadt, Darmstadt, Germany
| | - Nico Bruns
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, Glasgow, UK.
- Department of Chemistry and Centre for Synthetic Biology, Technical University of Darmstadt, Darmstadt, Germany.
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6
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Belluati A, Happel D, Erbe M, Kirchner N, Szelwicka A, Bloch A, Berner V, Christmann A, Hertel B, Pardehkhorram R, Reyhani A, Kolmar H, Bruns N. Self-decorating cells via surface-initiated enzymatic controlled radical polymerization. NANOSCALE 2023; 15:19486-19492. [PMID: 38051112 DOI: 10.1039/d3nr04008a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
Through the innovative use of surface-displayed horseradish peroxidase, this work explores the enzymatic catalysis of both bioRAFT polymerization and bioATRP to prompt polymer synthesis on the surface of Saccharomyces cerevisiae cells, with bioATRP outperforming bioRAFT polymerization. The resulting surface modification of living yeast cells with synthetic polymers allows for a significant change in yeast phenotype, including growth profile, aggregation characteristics, and conjugation of non-native enzymes to the clickable polymers on the cell surface, opening new avenues in bioorthogonal cell-surface engineering.
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Affiliation(s)
- Andrea Belluati
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
- Centre for Synthetic Biology, Technical University of Darmstadt, Merckstraße 25, 64283 Darmstadt, Germany
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, 295 Cathedral Street, Glashow G1 1XL, UK
| | - Dominic Happel
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Malte Erbe
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Nicole Kirchner
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Anna Szelwicka
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Adrian Bloch
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Valeria Berner
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Andreas Christmann
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Brigitte Hertel
- Department of Biology, Technical University of Darmstadt, Schnittspahnstrasse 3, 64287 Darmstadt, Germany
| | - Raheleh Pardehkhorram
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Amin Reyhani
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
| | - Harald Kolmar
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
- Centre for Synthetic Biology, Technical University of Darmstadt, Merckstraße 25, 64283 Darmstadt, Germany
| | - Nico Bruns
- Department of Chemistry, Technical University of Darmstadt, Peter-Grünberg-Straße 4, 64287 Darmstadt, Germany.
- Centre for Synthetic Biology, Technical University of Darmstadt, Merckstraße 25, 64283 Darmstadt, Germany
- Department of Pure and Applied Chemistry, University of Strathclyde, Thomas Graham Building, 295 Cathedral Street, Glashow G1 1XL, UK
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7
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Marciesky M, Aga DS, Bradley IM, Aich N, Ng C. Mechanisms and Opportunities for Rational In Silico Design of Enzymes to Degrade Per- and Polyfluoroalkyl Substances (PFAS). J Chem Inf Model 2023; 63:7299-7319. [PMID: 37981739 PMCID: PMC10716909 DOI: 10.1021/acs.jcim.3c01303] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 10/17/2023] [Accepted: 10/18/2023] [Indexed: 11/21/2023]
Abstract
Per and polyfluoroalkyl substances (PFAS) present a unique challenge to remediation techniques because their strong carbon-fluorine bonds make them difficult to degrade. This review explores the use of in silico enzymatic design as a potential PFAS degradation technique. The scope of the enzymes included is based on currently known PFAS degradation techniques, including chemical redox systems that have been studied for perfluorooctanesulfonic acid (PFOS) and perfluorooctanoic acid (PFOA) defluorination, such as those that incorporate hydrated electrons, sulfate, peroxide, and metal catalysts. Bioremediation techniques are also discussed, namely the laccase and horseradish peroxidase systems. The redox potential of known reactants and enzymatic radicals/metal-complexes are then considered and compared to potential enzymes for degrading PFAS. The molecular structure and reaction cycle of prospective enzymes are explored. Current knowledge and techniques of enzyme design, particularly radical-generating enzymes, and application are also discussed. Finally, potential routes for bioengineering enzymes to enable or enhance PFAS remediation are considered as well as the future outlook for computational exploration of enzymatic in situ bioremediation routes for these highly persistent and globally distributed contaminants.
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Affiliation(s)
- Melissa Marciesky
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, United States
| | - Diana S Aga
- Department of Chemistry, State University of New York at Buffalo, Buffalo, New York 14260, United States
| | - Ian M Bradley
- Department of Civil, Structural, and Environmental Engineering, State University of New York at Buffalo, Buffalo, New York 14228, United States
- Research and Education in Energy, Environmental and Water (RENEW) Institute, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Nirupam Aich
- Department of Civil and Environmental Engineering, University of Nebraska─Lincoln, Lincoln, Nebraska 68588-0531, United States
| | - Carla Ng
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, United States
- Department of Civil and Environmental Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, United States
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8
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Zhang X, Wang J, Zhang Y, Yang Z, Gao J, Gu Z. Synthesizing biomaterials in living organisms. Chem Soc Rev 2023; 52:8126-8164. [PMID: 37921625 DOI: 10.1039/d2cs00999d] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2023]
Abstract
Living organisms fabricate biomacromolecules such as DNA, RNA, and proteins by the self-assembly process. The research on the mechanism of biomacromolecule formation also inspires the exploration of in vivo synthesized biomaterials. By elaborate design, artificial building blocks or precursors can self-assemble or polymerize into functional biomaterials within living organisms. In recent decades, these so-called in vivo synthesized biomaterials have achieved extensive applications in cell-fate manipulation, disease theranostics, bioanalysis, cellular surface engineering, and tissue regeneration. In this review, we classify strategies for in vivo synthesis into non-covalent, covalent, and genetic types. The development of these approaches is based on the chemical principles of supramolecular chemistry and synthetic chemistry, biological cues such as enzymes and microenvironments, and the means of synthetic biology. By summarizing the design principles in detail, some insights into the challenges and opportunities in this field are provided to enlighten further research.
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Affiliation(s)
- Xiangyang Zhang
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Bioactive Materials, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, P. R. China.
| | - Junxia Wang
- Key Laboratory of Advanced Drug Delivery Systems of Zhejiang Province, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
- National Key Laboratory of Advanced Drug Delivery and Release Systems, Zhejiang University, Hangzhou 310058, China
| | - Ying Zhang
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Bioactive Materials, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, P. R. China.
| | - Zhimou Yang
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Bioactive Materials, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, P. R. China.
| | - Jie Gao
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Bioactive Materials, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, P. R. China.
| | - Zhen Gu
- Key Laboratory of Advanced Drug Delivery Systems of Zhejiang Province, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
- Liangzhu Laboratory, Zhejiang University Medical Center, Hangzhou 311121, China
- Jinhua Institute of Zhejiang University, Jinhua 321299, China
- Department of General Surgery, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou 310016, China
- National Key Laboratory of Advanced Drug Delivery and Release Systems, Zhejiang University, Hangzhou 310058, China
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310027, China
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9
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Dadashi-Silab S, Preston-Herrera C, Stache EE. Vitamin B 12 Derivative Enables Cobalt-Catalyzed Atom Transfer Radical Polymerization. J Am Chem Soc 2023; 145:19387-19395. [PMID: 37606469 DOI: 10.1021/jacs.3c06783] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/23/2023]
Abstract
Advances in controlled radical polymerizations by cobalt complexes have primarily taken advantage of the reactivity of cobalt as a persistent radical to reversibly deactivate propagating chains by forming a carbon-cobalt bond. However, cobalt-mediated radical polymerizations require stoichiometric ratios of a cobalt complex, deterring its utility in synthesizing well-defined polymers. Here, we developed a strategy to use cobalt as a catalyst to control radical polymerizations via halogen atom transfer with alkyl halide initiators. Using a modified, hydrophobic analogue of vitamin B12 (heptamethyl ester cobyrinate) as a cobalt precatalyst, we controlled the polymerization of acrylate monomers. The polymerization efficiency of the cobalt catalyst was significantly improved by additional bromide anions, which enhanced the deactivation of propagating radicals yielding polymers with dispersity values <1.2 using catalyst concentrations as low as 5 mol %. We anticipate that the development of cobalt catalysis in atom transfer radical polymerization will enable new opportunities in designing catalytic systems for the controlled synthesis of polymers.
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Affiliation(s)
- Sajjad Dadashi-Silab
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States
| | - Cristina Preston-Herrera
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States
| | - Erin E Stache
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States
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10
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Li R, Kong W, An Z. Controlling Radical Polymerization with Biocatalysts. Macromolecules 2023. [DOI: 10.1021/acs.macromol.2c02307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Ruoyu Li
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
| | - Weina Kong
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
- Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Sciences, Jilin University, Changchun 130012, China
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11
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Lubskyy A, Guo C, Chadwick RJ, Petri-Fink A, Bruns N, Pellizzoni MM. Engineered myoglobin as a catalyst for atom transfer radical cyclisation. Chem Commun (Camb) 2022; 58:10989-10992. [PMID: 36093761 PMCID: PMC9521412 DOI: 10.1039/d2cc03227a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 08/30/2022] [Indexed: 11/21/2022]
Abstract
Myoglobin was subjected to site-directed mutagenesis and transformed into a catalyst able to perform atom transfer radical cyclisation reactions, i.e. intramolecular atom transfer radical additions. Replacing the iron-coordinating histidine with serine, or introducing small changes inside or at the entrance of the active site, transformed the completely inactive wild-type myoglobin into an artificial metalloenzyme able to catalyse the 5-exo cyclisation of halogenated unsaturated compounds for the synthesis of γ-lactams. This new-to-nature activity was achieved not only with purified protein but also in crude cell lysate and in whole cells.
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Affiliation(s)
- Andriy Lubskyy
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4,1700, Fribourg, Switzerland.
| | - Chao Guo
- Department of Pure and Applied Chemistry, University of Strathclyde, 295 Cathedral Street, Glasgow, G1 1XL, UK.
| | - Robert J Chadwick
- Department of Pure and Applied Chemistry, University of Strathclyde, 295 Cathedral Street, Glasgow, G1 1XL, UK.
| | - Alke Petri-Fink
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4,1700, Fribourg, Switzerland.
- Department of Chemistry, University of Fribourg, Chemin du Musée 9,1700, Fribourg, Switzerland
| | - Nico Bruns
- Department of Pure and Applied Chemistry, University of Strathclyde, 295 Cathedral Street, Glasgow, G1 1XL, UK.
- Department of Chemistry, Technical University of Darmstadt, Alarich-Weiss-Straße 4, 64287, Darmstadt, Germany
| | - Michela M Pellizzoni
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4,1700, Fribourg, Switzerland.
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12
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Guo C, Chadwick RJ, Foulis A, Bedendi G, Lubskyy A, Rodriguez KJ, Pellizzoni MM, Milton RD, Beveridge R, Bruns N. Peroxidase Activity of Myoglobin Variants Reconstituted with Artificial Cofactors. Chembiochem 2022; 23:e202200197. [PMID: 35816250 PMCID: PMC9545363 DOI: 10.1002/cbic.202200197] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 07/08/2022] [Indexed: 02/02/2023]
Abstract
Myoglobin (Mb) can react with hydrogen peroxide (H2 O2 ) to form a highly active intermediate compound and catalyse oxidation reactions. To enhance this activity, known as pseudo-peroxidase activity, previous studies have focused on the modification of key amino acid residues of Mb or the heme cofactor. In this work, the Mb scaffold (apo-Mb) was systematically reconstituted with a set of cofactors based on six metal ions and two ligands. These Mb variants were fully characterised by UV-Vis spectroscopy, circular dichroism (CD) spectroscopy, inductively coupled plasma mass spectrometry (ICP-MS) and native mass spectrometry (nMS). The steady-state kinetics of guaiacol oxidation and 2,4,6-trichlorophenol (TCP) dehalogenation catalysed by Mb variants were determined. Mb variants with iron chlorin e6 (Fe-Ce6) and manganese chlorin e6 (Mn-Ce6) cofactors were found to have improved catalytic efficiency for both guaiacol and TCP substrates in comparison with wild-type Mb, i. e. Fe-protoporphyrin IX-Mb. Furthermore, the selected cofactors were incorporated into the scaffold of a Mb mutant, swMb H64D. Enhanced peroxidase activity for both substrates were found via the reconstitution of Fe-Ce6 into the mutant scaffold.
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Affiliation(s)
- Chao Guo
- Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetG1 1XLGlasgowUK
| | - Robert J. Chadwick
- Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetG1 1XLGlasgowUK
| | - Adam Foulis
- Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetG1 1XLGlasgowUK
| | - Giada Bedendi
- Department of Inorganic and Analytical ChemistryUniversity of Geneva1211Geneva 4Switzerland
| | - Andriy Lubskyy
- Adolphe Merkle InstituteUniversity of FribourgChemin des Verdiers 41700FribourgSwitzerland
| | - Kyle J. Rodriguez
- Adolphe Merkle InstituteUniversity of FribourgChemin des Verdiers 41700FribourgSwitzerland
| | - Michela M. Pellizzoni
- Adolphe Merkle InstituteUniversity of FribourgChemin des Verdiers 41700FribourgSwitzerland
| | - Ross D. Milton
- Department of Inorganic and Analytical ChemistryUniversity of Geneva1211Geneva 4Switzerland
| | - Rebecca Beveridge
- Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetG1 1XLGlasgowUK
| | - Nico Bruns
- Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetG1 1XLGlasgowUK,Department of ChemistryTechnical University of DarmstadtAlarich-Weiss-Str. 464287DarmstadtGermany
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13
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Li R, Kong W, An Z. Enzyme Catalysis for Reversible Deactivation Radical Polymerization. Angew Chem Int Ed Engl 2022; 61:e202202033. [PMID: 35212121 DOI: 10.1002/anie.202202033] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2022] [Indexed: 12/31/2022]
Abstract
Enzyme catalysis has been increasingly utilized in reversible deactivation radical polymerization (Enz-RDRP) on account of its mildness, efficiency, and sustainability. In this Minireview we discuss the key roles enzymes play in RDRP, including their ATRPase, initiase, deoxygenation, and photoenzyme activities. We use selected examples to highlight applications of Enz-RDRP in surface brush fabrication, sensing, polymerization-induced self-assembly, and high-throughput synthesis. We also give our reflections on the challenges and future directions of this emerging area.
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Affiliation(s)
- Ruoyu Li
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry, Jilin University, Changchun, 130012, China
| | - Weina Kong
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry, Jilin University, Changchun, 130012, China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry, Jilin University, Changchun, 130012, China.,Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Sciences, Jilin University, Changchun, 130012, China
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14
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Xie PC, Guo XQ, Yang FQ, Xu N, Chen YY, Wang XQ, Wang H, Yong YC. Cytochrome C catalyzed oxygen tolerant atom-transfer radical polymerization. BIORESOUR BIOPROCESS 2022; 9:41. [PMID: 38647739 PMCID: PMC10992558 DOI: 10.1186/s40643-022-00531-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 03/25/2022] [Indexed: 11/10/2022] Open
Abstract
Atom-transfer radical polymerization (ATRP) is a well-known technique for controlled polymer synthesis. However, the ATRP usually employed toxic heavy metal ionas as the catalyst and was susceptible to molecular oxygen, which made it should be conducted under strictly anoxic condition. Conducting ATRP under ambient and biocompatible conditions is the major challenge. In this study, cytochrome C was explored as an efficient biocatalyst for ATRP under biocompatible conditions. The cytochrome C catalyzed ATRP showed a relatively low polymer dispersity index of 1.19. More interestingly, the cytochrome C catalyzed ATRP showed superior oxygen resistance as it could be performed under aerobic conditions with high dissolved oxygen level. Further analysis suggested that the Fe(II) embed in the cytochrome C might serve as the catalytic center and methyl radical was responsible for the ATRP catalysis. This work explored new biocompatible catalyst for aerobic ATRP, which might open new dimension for practical ATRP and application of cytochrome C protein.
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Affiliation(s)
- Peng-Cheng Xie
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Xue-Qing Guo
- Joint Institute of Jiangsu University-Hongrun Tech, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Fu-Qiao Yang
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Nuo Xu
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Yuan-Yuan Chen
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Xing-Qiang Wang
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Hongcheng Wang
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China
| | - Yang-Chun Yong
- Biofuels Institute, School of Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China.
- Joint Institute of Jiangsu University-Hongrun Tech, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, China.
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15
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An Z, Li R, Kong W. Enzyme Catalysis for Reversible Deactivation Radical Polymerization. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202202033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Zesheng An
- Jilin University State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry 2699 Qianjin Street, Changchun 130012, China 130012 Changchun CHINA
| | - Ruoyu Li
- Jilin University College of Chemistry CHINA
| | - Weina Kong
- Jilin University College of Chemistry CHINA
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16
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Liu C, Cheng F, Liu B, Gao D, Cheng G, Li C, Wang H, He W. Versatile, Oxygen-Insensitive Surface-Initiated Anionic Polymerization to Prepare Functional Polymer Brushes in Aqueous Solutions. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:1001-1010. [PMID: 34949091 DOI: 10.1021/acs.langmuir.1c02416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Surface-initiated polymerization is an attractive approach to achieve desired interfacial compositions and properties on a wide range of substrates and surfaces. Due to mild reaction conditions, multiple surface-initiated polymerization methods, such as atom-transfer radical polymerization (ATRP), reversible addition-fragmentation chain-transfer polymerization, and so forth, have been developed and studied in academia and industry. However, the current methods require the combination of metal catalysts, special initiators, and oxygen removal. Herein, we developed a surface-initiated carbanion-mediated anionic polymerization (SI-CMAP), which can be conducted in aqueous solutions in the presence of oxygen without the need for metal catalysts. Zwitterionic 2-(N-3-sulfopropyl-N,N-dimethyl ammonium)ethyl methacrylate (SBMA) was selected as a model monomer to develop and demonstrate this strategy. The vinyl sulfone (VS) groups displayed on substrate surfaces reacted with N-methylimidazole (NMIM), which was used as the in situ initiator. The polymerization mechanism was extensively studied from many aspects at room temperature, including the changes in reaction conditions, factors affecting the polymerization extent, and substrate surfaces. We also demonstrated the compatibility of this method with a broad spectrum of monomers ranging from SBMA to other acrylates and acrylamides by using glycine betaine as a reaction additive. This method was also evaluated for the preparation of polymer-coated nanoparticles. For polymer-coated silica nanoparticles, their hydrodynamic diameter, copper contamination, and effects of salt and protein concentrations were compared with SI-ATRP in parallel. SI-CMAP in aqueous solutions in air and the absence of metal catalysts make this method sustainable and cost-effective. We believe that SI-CMAP can be readily adapted to the industrial surface coating and large-scale nanoparticle preparation under mild conditions.
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Affiliation(s)
- Chong Liu
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, Liaoning 116023, China
- Department of Polymer Science & Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116023, China
| | - Fang Cheng
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, Liaoning 116023, China
- Department of Pharmacy, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116023, China
| | - Bo Liu
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, Liaoning 116023, China
- Department of Pharmacy, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116023, China
| | - Dongdong Gao
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, Liaoning 116023, China
- Department of Polymer Science & Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116023, China
| | - Gang Cheng
- Department of Chemical Engineering, University of Illinois at Chicago, Chicago, Illinois 60607, United States
| | - Chunmei Li
- Tsinglan School, Songshan Lake, Dongguan, Guangdong 523000, China
| | - Huanan Wang
- School of Bioengineering, Dalian University of Technology, Dalian, Liaoning 116023, China
| | - Wei He
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, Liaoning 116023, China
- Department of Polymer Science & Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116023, China
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17
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Zhang Y, Dydio P. Teaching natural enzymes new radical tricks. Science 2021; 374:1558-1559. [PMID: 34941419 DOI: 10.1126/science.abm8321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
[Figure: see text].
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Affiliation(s)
- Yang Zhang
- University of Strasbourg, CNRS, ISIS UMR 7006, 8 allée Gaspard Monge, 67000 Strasbourg, France
| | - Paweł Dydio
- University of Strasbourg, CNRS, ISIS UMR 7006, 8 allée Gaspard Monge, 67000 Strasbourg, France
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18
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Zhou Q, Chin M, Fu Y, Liu P, Yang Y. Stereodivergent atom-transfer radical cyclization by engineered cytochromes P450. Science 2021; 374:1612-1616. [PMID: 34941416 PMCID: PMC9309897 DOI: 10.1126/science.abk1603] [Citation(s) in RCA: 78] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Naturally occurring enzymes can be a source of unnatural reactivity that can be molded by directed evolution to generate efficient biocatalysts with valuable activities. Owing to the lack of exploitable stereocontrol elements in synthetic systems, steering the absolute and relative stereochemistry of free-radical processes is notoriously difficult in asymmetric catalysis. Inspired by the innate redox properties of first-row transition-metal cofactors, we repurposed cytochromes P450 to catalyze stereoselective atom-transfer radical cyclization. A set of metalloenzymes was engineered to impose substantial stereocontrol over the radical addition step and the halogen rebound step in these unnatural processes, allowing enantio- and diastereodivergent radical catalysis. This evolvable metalloenzyme platform represents a promising solution to tame fleeting radical intermediates for asymmetric catalysis.
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Affiliation(s)
- Qi Zhou
- Department of Chemistry and Biochemistry, University of California Santa Barbara, Santa Barbara, California 93106, USA
| | - Michael Chin
- Department of Chemistry and Biochemistry, University of California Santa Barbara, Santa Barbara, California 93106, USA
| | - Yue Fu
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Peng Liu
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Yang Yang
- Department of Chemistry and Biochemistry, University of California Santa Barbara, Santa Barbara, California 93106, USA.,Biomolecular Science and Engineering Program, University of California Santa Barbara, Santa Barbara, California 93106, USA.,Corresponding author.
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19
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Hu W, Liu L, Fan Y, Huang M. Facile synthesis of mesoporous copper silicate aggregates for highly selective enrichment of hemoglobin. Microchem J 2021. [DOI: 10.1016/j.microc.2021.106256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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20
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Nothling MD, Cao H, McKenzie TG, Hocking DM, Strugnell RA, Qiao GG. Bacterial Redox Potential Powers Controlled Radical Polymerization. J Am Chem Soc 2021; 143:286-293. [PMID: 33373526 DOI: 10.1021/jacs.0c10673] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Microbes employ a remarkably intricate electron transport system to extract energy from the environment. The respiratory cascade of bacteria culminates in the terminal transfer of electrons onto higher redox potential acceptors in the extracellular space. This general and inducible mechanism of electron efflux during normal bacterial proliferation leads to a characteristic fall in bulk redox potential (Eh), the degree of which is dependent on growth phase, the microbial taxa, and their physiology. Here, we show that the general reducing power of bacteria can be subverted to induce the abiotic production of a carbon-centered radical species for targeted bioorthogonal molecular synthesis. Using two species, Escherichia coli and Salmonella enterica serovar Typhimurium as model microbes, a common redox active aryldiazonium salt is employed to intervene in the terminal respiratory electron flow, affording radical production that is mediated by native redox-active molecular shuttles and active bacterial metabolism. The aryl radicals are harnessed to initiate and sustain a bioorthogonal controlled radical polymerization via reversible addition-fragmentation chain transfer (BacRAFT), yielding a synthetic extracellular matrix of "living" vinyl polymers with predetermined molecular weight and low dispersity. The ability to interface the ubiquitous reducing power of bacteria into synthetic materials design offers a new means for creating engineered living materials with promising adaptive and self-regenerative capabilities.
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Affiliation(s)
- Mitchell D Nothling
- Department of Chemical Engineering, University of Melbourne, Melbourne, VIC 3010, Australia
| | - Hanwei Cao
- Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne, VIC 3000, Australia
| | - Thomas G McKenzie
- Department of Chemical Engineering, University of Melbourne, Melbourne, VIC 3010, Australia
| | - Dianna M Hocking
- Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne, VIC 3000, Australia
| | - Richard A Strugnell
- Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne, VIC 3000, Australia
| | - Greg G Qiao
- Department of Chemical Engineering, University of Melbourne, Melbourne, VIC 3010, Australia
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21
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Li R, An Z. Achieving Ultrahigh Molecular Weights with Diverse Architectures for Unconjugated Monomers through Oxygen-Tolerant Photoenzymatic RAFT Polymerization. Angew Chem Int Ed Engl 2020; 59:22258-22264. [PMID: 32844514 DOI: 10.1002/anie.202010722] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 08/24/2020] [Indexed: 12/15/2022]
Abstract
Achieving well-defined polymers with ultrahigh molecular weight (UHMW) is an enduring pursuit in the field of reversible deactivation radical polymerization. Synthetic protocols have been successfully developed to achieve UHMWs with low dispersities exclusively from conjugated monomers while no polymerization of unconjugated monomers has provided the same level of control. Herein, an oxygen-tolerant photoenzymatic RAFT (reversible addition-fragmentation chain transfer) polymerization was exploited to tackle this challenge for unconjugated monomers at 10 °C, enabling facile synthesis of well-defined, linear and star polymers with near-quantitative conversions, unprecedented UHMWs and low dispersities. The exquisite level of control over composition, MW and architecture, coupled with operational ease, mild conditions and environmental friendliness, broadens the monomer scope to include unconjugated monomers, and to achieve previously inaccessible low-dispersity UHMWs.
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Affiliation(s)
- Ruoyu Li
- Institute of Nanochemistry and Nanobiology, College of Environmental and Chemical Engineering, Shanghai University, Shanghai, 200444, China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Sciences, Jilin University, Changchun, 130012, China
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22
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Raccio S, Pollard J, Djuhadi A, Balog S, Pellizzoni MM, Rodriguez KJ, Rifaie-Graham O, Bruns N. Rapid quantification of the malaria biomarker hemozoin by improved biocatalytically initiated precipitation atom transfer radical polymerizations. Analyst 2020; 145:7741-7751. [PMID: 33000767 DOI: 10.1039/d0an00976h] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
The fight against tropical diseases such as malaria requires the development of innovative biosensing techniques. Diagnostics must be rapid and robust to ensure prompt case management and to avoid further transmission. The malaria biomarker hemozoin can catalyze atom transfer radical polymerizations (ATRP), which we exploit in a polymerization-amplified biosensing assay for hemozoin based on the precipitation polymerization of N-isopropyl acrylamide (NIPAAm). The reaction conditions are systematically investigated using synthetic hemozoin to gain fundamental understanding of the involved reactions and to greatly reduce the amplification time, while maintaining the sensitivity of the assay. The use of excess ascorbate allows oxygen to be consumed in situ but leads to the formation of reactive oxygen species and to the decomposition of the initiator 2-hydroxyethyl 2-bromoisobutyrate (HEBIB). Addition of sodium dodecyl sulfate (SDS) and pyruvate results in better differentiation between the blank and hemozoin-containing samples. Optimized reaction conditions (including reagents, pH, and temperature) reduce the amplification time from 37 ± 5 min to 3 ± 0.5 min while maintaining a low limit of detection of 1.06 ng mL-1. The short amplification time brings the precipitation polymerization assay a step closer to a point-of-care diagnostic device for malaria. Future efforts will be dedicated to the isolation of hemozoin from clinical samples.
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Affiliation(s)
- Samuel Raccio
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700 Fribourg, Switzerland
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23
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Nothling MD, Fu Q, Reyhani A, Allison‐Logan S, Jung K, Zhu J, Kamigaito M, Boyer C, Qiao GG. Progress and Perspectives Beyond Traditional RAFT Polymerization. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2020; 7:2001656. [PMID: 33101866 PMCID: PMC7578854 DOI: 10.1002/advs.202001656] [Citation(s) in RCA: 101] [Impact Index Per Article: 20.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Revised: 06/17/2020] [Indexed: 05/09/2023]
Abstract
The development of advanced materials based on well-defined polymeric architectures is proving to be a highly prosperous research direction across both industry and academia. Controlled radical polymerization techniques are receiving unprecedented attention, with reversible-deactivation chain growth procedures now routinely leveraged to prepare exquisitely precise polymer products. Reversible addition-fragmentation chain transfer (RAFT) polymerization is a powerful protocol within this domain, where the unique chemistry of thiocarbonylthio (TCT) compounds can be harnessed to control radical chain growth of vinyl polymers. With the intense recent focus on RAFT, new strategies for initiation and external control have emerged that are paving the way for preparing well-defined polymers for demanding applications. In this work, the cutting-edge innovations in RAFT that are opening up this technique to a broader suite of materials researchers are explored. Emerging strategies for activating TCTs are surveyed, which are providing access into traditionally challenging environments for reversible-deactivation radical polymerization. The latest advances and future perspectives in applying RAFT-derived polymers are also shared, with the goal to convey the rich potential of RAFT for an ever-expanding range of high-performance applications.
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Affiliation(s)
- Mitchell D. Nothling
- Polymer Science GroupDepartment of Chemical EngineeringThe University of MelbourneParkvilleVIC3010Australia
| | - Qiang Fu
- Centre for Technology in Water and Wastewater Treatment (CTWW)School of Civil and Environmental EngineeringUniversity of Technology SydneyUltimoNSW2007Australia
| | - Amin Reyhani
- Polymer Science GroupDepartment of Chemical EngineeringThe University of MelbourneParkvilleVIC3010Australia
| | - Stephanie Allison‐Logan
- Polymer Science GroupDepartment of Chemical EngineeringThe University of MelbourneParkvilleVIC3010Australia
| | - Kenward Jung
- Centre for Advanced Macromolecular Design (CAMD) and Australian Centre for NanoMedicine (ACN)School of Chemical EngineeringUNWSSydneyNSW2052Australia
| | - Jian Zhu
- College of ChemistryChemical Engineering and Material ScienceDepartment of Polymer Science and EngineeringSoochow UniversitySuzhou215123China
| | - Masami Kamigaito
- Department of Molecular and Macromolecular ChemistryGraduate School of EngineeringNagoya UniversityFuro‐cho, Chikusa‐kuNagoya464‐8603Japan
| | - Cyrille Boyer
- Centre for Advanced Macromolecular Design (CAMD) and Australian Centre for NanoMedicine (ACN)School of Chemical EngineeringUNWSSydneyNSW2052Australia
| | - Greg G. Qiao
- Polymer Science GroupDepartment of Chemical EngineeringThe University of MelbourneParkvilleVIC3010Australia
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24
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Li R, An Z. Achieving Ultrahigh Molecular Weights with Diverse Architectures for Unconjugated Monomers through Oxygen‐Tolerant Photoenzymatic RAFT Polymerization. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202010722] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Ruoyu Li
- Institute of Nanochemistry and Nanobiology College of Environmental and Chemical Engineering Shanghai University Shanghai 200444 China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials College of Chemistry, Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences Jilin University Changchun 130012 China
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25
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Özenler S, Sozen Y, Sahin H, Yildiz UH. Fabrication of a Postfunctionalizable, Biorepellent, Electroactive Polyurethane Interface on a Gold Surface by Surface-Assisted Polymerization. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:6828-6836. [PMID: 32459493 DOI: 10.1021/acs.langmuir.9b03922] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
This study describes surface-assisted (SurfAst) urethane polymerization, providing a modular/postfunctionalizable, biorepellent, electroactive ∼10 to 100 nm-thick polyurethane (PU) interface on a gold surface. SurfAst is a functionalization methodology based on sequential incubation steps of alkane diisocyanates and alkanediol monomers. The gold surface is functionalized by alkane diisocyanates in the first incubation step, and our theoretical calculations reveal that while the isocyanate group atoms (N, C, and O) at one end of the molecule exhibits strong interactions (∼900 meV) with surface atoms, the other end group remains unreacted. After the first incubation step, sequential alkanediol and alkane diisocyanate incubations provide formation of the PU interface. The extensive analysis of the PU interface has been conducted via X-ray photoelectron spectroscopy, and the chemical mapping verifies that the interface is made of PU moieties. The topographical analysis of the surface conducted by the atomic force microscopy shows that the PU interface consists of mostly a nanoporous texture with 150 nm total roughness. The adherence force mapping of the PU interface reveals that the nanoporous matrix exhibits an adhesion force of about 14 nN. The electrostatic force microscopy characterizing long-range electrostatic interactions (40 nm) shows that the PU interface has been attracted by positively charged species as compared to negative objects. Finally, it is demonstrated that the PU interface is readily postfunctionalizable by polyethylene glycol (PEG 1000), serving as a biorepellent interface and preserving electroactivity. We foresee that SurfAst polymerization will have potential for the facile fabrication of a postfunctionalizable and modular biointerface which might be utilized for biosensing and bioelectronic applications.
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Affiliation(s)
- Sezer Özenler
- Department of Chemistry, Izmir Institute of Technology, Gülbahçe, Urla, 35430 Izmir, Turkey
| | - Yigit Sozen
- Department of Photonics, Izmir Institute of Technology, Gülbahçe, Urla, 35430 Izmir, Turkey
| | - Hasan Sahin
- Department of Photonics, Izmir Institute of Technology, Gülbahçe, Urla, 35430 Izmir, Turkey
| | - Umit Hakan Yildiz
- Department of Chemistry, Izmir Institute of Technology, Gülbahçe, Urla, 35430 Izmir, Turkey
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26
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Dadashi-Silab S, Matyjaszewski K. Iron Catalysts in Atom Transfer Radical Polymerization. Molecules 2020; 25:E1648. [PMID: 32260141 PMCID: PMC7180715 DOI: 10.3390/molecules25071648] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Revised: 03/31/2020] [Accepted: 04/01/2020] [Indexed: 11/18/2022] Open
Abstract
Catalysts are essential for mediating a controlled polymerization in atom transfer radical polymerization (ATRP). Copper-based catalysts are widely explored in ATRP and are highly efficient, leading to well-controlled polymerization of a variety of functional monomers. In addition to copper, iron-based complexes offer new opportunities in ATRP catalysis to develop environmentally friendly, less toxic, inexpensive, and abundant catalytic systems. Despite the high efficiency of iron catalysts in controlling polymerization of various monomers including methacrylates and styrene, ATRP of acrylate-based monomers by iron catalysts still remains a challenge. In this paper, we review the fundamentals and recent advances of iron-catalyzed ATRP focusing on development of ligands, catalyst design, and techniques used for iron catalysis in ATRP.
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Affiliation(s)
| | - Krzysztof Matyjaszewski
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA 15213, USA;
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27
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An Z. 100th Anniversary of Macromolecular Science Viewpoint: Achieving Ultrahigh Molecular Weights with Reversible Deactivation Radical Polymerization. ACS Macro Lett 2020; 9:350-357. [PMID: 35648556 DOI: 10.1021/acsmacrolett.0c00043] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Synthetic strategies for achieving ultrahigh molecular weights via reversible deactivation radical polymerization are discussed from the mechanistic, kinetic, and experimental aspects, and their applications as high-performance materials are highlighted. Further development of this field requires continuous effort to improve livingness and polymerization efficiency under greener conditions.
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Affiliation(s)
- Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
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28
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Zhang A, Meng X, Bao C, Zhang Q. In situ synthesis of protein-loaded hydrogels via biocatalytic ATRP. Polym Chem 2020. [DOI: 10.1039/c9py01815h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Protein-loaded hydrogels were synthesized in one pot under mild polymerization conditions via biocatalytic ATRP for the first time.
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Affiliation(s)
- Aotian Zhang
- Key Laboratory of New Membrane Materials, Ministry of Industry and Information Technology
- School of Environmental and Biological Engineering
- Nanjing University of Science and Technology
- Nanjing 210094
- P. R. China
| | - Xiancheng Meng
- Key Laboratory of New Membrane Materials, Ministry of Industry and Information Technology
- School of Environmental and Biological Engineering
- Nanjing University of Science and Technology
- Nanjing 210094
- P. R. China
| | - Chunyang Bao
- Key Laboratory of New Membrane Materials, Ministry of Industry and Information Technology
- School of Environmental and Biological Engineering
- Nanjing University of Science and Technology
- Nanjing 210094
- P. R. China
| | - Qiang Zhang
- Key Laboratory of New Membrane Materials, Ministry of Industry and Information Technology
- School of Environmental and Biological Engineering
- Nanjing University of Science and Technology
- Nanjing 210094
- P. R. China
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29
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Liu D, He J, Zhang L, Tan J. 100th Anniversary of Macromolecular Science Viewpoint: Heterogenous Reversible Deactivation Radical Polymerization at Room Temperature. Recent Advances and Future Opportunities. ACS Macro Lett 2019; 8:1660-1669. [PMID: 35619385 DOI: 10.1021/acsmacrolett.9b00870] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Heterogenous reversible deactivation radical polymerization (RDRP) has become an important method for the preparation of a diverse set of well-defined polymer materials in dispersed systems. Conducting heterogeneous RDRP at room temperature seems to be a minor adjustment in polymerization technique but this will lead to a great opportunity for functional polymer synthesis, developing of interesting heterogeneous RDRP systems, and better mechanistic insights into heterogeneous RDRP. In this Viewpoint, we highlight some recent advances of room-temperature heterogeneous RDRP that are challenging to achieve via traditional thermally initiated heterogeneous RDRP. We hope that this Viewpoint can provide some inspiration for both experts in this field and new comers, as well as nonexperts who are interested in preparing their own polymer materials by conducting room-temperature heterogeneous RDRP.
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Affiliation(s)
- Dongdong Liu
- Department of Polymeric Materials and Engineering, School of Materials and Energy, Guangdong University of Technology, Guangzhou 510006, China
| | - Jun He
- Department of Polymeric Materials and Engineering, School of Materials and Energy, Guangdong University of Technology, Guangzhou 510006, China
| | - Li Zhang
- Department of Polymeric Materials and Engineering, School of Materials and Energy, Guangdong University of Technology, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory of Functional Soft Condensed Matter, Guangzhou 510006, China
| | - Jianbo Tan
- Department of Polymeric Materials and Engineering, School of Materials and Energy, Guangdong University of Technology, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory of Functional Soft Condensed Matter, Guangzhou 510006, China
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30
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Pollard J, Rifaie-Graham O, Raccio S, Davey A, Balog S, Bruns N. Biocatalytically Initiated Precipitation Atom Transfer Radical Polymerization (ATRP) as a Quantitative Method for Hemoglobin Detection in Biological Fluids. Anal Chem 2019; 92:1162-1170. [PMID: 31790204 DOI: 10.1021/acs.analchem.9b04290] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The hemoglobin content of blood is an important health indicator, and the presence of microscopic amounts of hemoglobin in places where it normally does not occur, e.g. in blood plasma or in urine, is a sign of diseases such as hemolytic anemia or urinary tract infections. Thus, methods to detect and quantify hemoglobin are important for clinical laboratories, blood banks, and for point-of-care diagnostics. The precipitation polymerization of N-isopropylacrylamide by hemoglobin-catalyzed atom transfer radical polymerization (ATRP) is used as an assay for hemoglobin quantification relying on the formation of turbidity as a simple optical read-out. Dose-response curves for pure hemoglobin and for hemoglobin in blood plasma, in urine, in erythrocytes, and in full blood are obtained. Turbidity formation increases with the concentration of hemoglobin. Concentrations of hemoglobin as low as 6.45 × 10-3 mg mL-1 in solution, 4.88 × 10-1 mg mL-1 in plasma, and 1.65 × 10-1 mg mL-1 in urine could be detected, which is below the clinically relevant concentrations in the respective body fluids. Total hemoglobin in full blood is also accurately determined. The reaction can be regarded as a polymerization-based signal amplification for the sensing of hemoglobin, as the analyte catalyzes the formation of radicals which add many monomer units into detectable polymer chains. While most established hemoglobin tests involve the use of highly toxic reagents such as potassium cyanide, the polymerization-based test uses simple and stable organic reagents. Thus, it is an environmentally friendlier alternative to established chemical assays for hemoglobin.
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Affiliation(s)
- Jonas Pollard
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland
| | - Omar Rifaie-Graham
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland
| | - Samuel Raccio
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland
| | - Annabelle Davey
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland
| | - Sandor Balog
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland
| | - Nico Bruns
- Adolphe Merkle Institute, University of Fribourg , Chemin des Verdiers 4 , 1700 Fribourg , Switzerland.,Department of Pure and Applied Chemistry , University of Strathclyde , Thomas Graham Building, 295 Cathedral Street , Glasgow G1 1XL , United Kingdom
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31
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Enzyme-initiated free radical polymerizations of vinyl monomers using horseradish peroxidase. Methods Enzymol 2019; 627:249-262. [PMID: 31630743 DOI: 10.1016/bs.mie.2019.08.013] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
Abstract
In this chapter, we highlight the use of horseradish peroxidase (HRP) as a catalyst to initiate free radical polymerizations of vinyl monomers under benign reaction conditions. A variety of vinyl monomers, including 4-acryloylmorpholine (AM), 2-hydroxyethyl methacrylate (HEMA), and poly(ethylene glycol) methyl ether acrylate (PEGA) were polymerized. The enzyme converts exogenous hydrogen peroxide into a usable radical source, which when coupled with a β-diketone, yields a radical that initiates chain growth in the presence of monomers. The resulting polymers were characterized using nuclear magnetic resonance (NMR) spectroscopy and gel permeation chromatography (GPC). By using enzymatic free radical polymerizations, polymers can be generated in a sustainable, environmentally-friendly, and scalable fashion.
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32
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Rodriguez KJ, Pellizzoni MM, Divandari M, Benetti EM, Bruns N. Biocatalytic ATRP in solution and on surfaces. Methods Enzymol 2019; 627:263-290. [PMID: 31630744 DOI: 10.1016/bs.mie.2019.08.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023]
Abstract
The promiscuity of enzymes allows for their implementation as catalysts for non-native chemical transformations. Utilizing the redox activity of metalloenzymes under activator regenerated by electron transfer (ARGET) ATRP conditions, well-controlled and defined polymers can be generated. In this chapter, we review bioATRP in solution and on surfaces and provide experimental protocols for hemoglobin-catalyzed ATRP and for surface-initiated biocatalytic ATRP. This chapter highlights the polymerization of acrylate and acrylamide monomers and provides detailed experimental protocols for the characterization of the polymers and of the polymer brushes.
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Affiliation(s)
- Kyle J Rodriguez
- Adolphe Merkle Institute, University of Fribourg, Fribourg, Switzerland
| | | | - Mohammad Divandari
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Zürich, Switzerland
| | - Edmondo M Benetti
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Zürich, Switzerland.
| | - Nico Bruns
- Department of Pure and Applied Chemistry, University of Strathclyde, Glasgow, United Kingdom.
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33
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Affiliation(s)
- Azis Adharis
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Katja Loos
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of Groningen Nijenborgh 4 9747 AG Groningen The Netherlands
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34
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Zhou F, Li R, Wang X, Du S, An Z. Non‐natural Photoenzymatic Controlled Radical Polymerization Inspired by DNA Photolyase. Angew Chem Int Ed Engl 2019; 58:9479-9484. [DOI: 10.1002/anie.201904413] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2019] [Indexed: 12/20/2022]
Affiliation(s)
- Fanfan Zhou
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Ruoyu Li
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Xiao Wang
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Simin Du
- Qianweichang CollegeShanghai University Shanghai 200444 China
| | - Zesheng An
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
- State Key Laboratory of Supramolecular Structure and Materials College of ChemistryJilin University Changchun 130012 China
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35
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Zhou F, Li R, Wang X, Du S, An Z. Non‐natural Photoenzymatic Controlled Radical Polymerization Inspired by DNA Photolyase. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201904413] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Fanfan Zhou
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Ruoyu Li
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Xiao Wang
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
| | - Simin Du
- Qianweichang CollegeShanghai University Shanghai 200444 China
| | - Zesheng An
- Institute of Nanochemistry and NanobiologyCollege of Environmental and Chemical EngineeringShanghai University Shanghai 200444 China
- State Key Laboratory of Supramolecular Structure and Materials College of ChemistryJilin University Changchun 130012 China
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36
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Wang X, An Z. Enzyme-initiated reversible addition-fragmentation chain transfer (RAFT) polymerization: Precision polymer synthesis via enzymatic catalysis. Methods Enzymol 2019; 627:291-319. [PMID: 31630745 DOI: 10.1016/bs.mie.2019.05.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Enzyme-initiated reversible addition-fragmentation chain transfer (RAFT) polymerization provides a sustainable strategy for efficient production of well-defined polymers under mild conditions. Horseradish peroxidase (HRP), a heme-containing metalloenzyme, catalyzes oxidation of acetylacetone (ACAC) by hydrogen peroxide (H2O2) to generate ACAC radicals, initiating polymerization of vinyl monomers. This HRP/H2O2/ACAC ternary initiating system is applied to RAFT polymerization of different types of vinyl monomers. Furthermore, to overcome the inherent limitation of necessity for oxygen-free conditions, another enzyme, glucose oxidase (GOx) or pyranose 2-oxidase (P2Ox), with excellent deoxygenation capability, is introduced to consume oxygen by catalyzing oxidation of glucose to generate H2O2. The generated H2O2 is directly supplied to HRP catalysis for radical generation. Both GOx-HRP and P2Ox-HRP cascade catalysis afford RAFT polymerization with oxygen tolerance. In this chapter, we mainly focus on detailed synthetic protocols of RAFT polymerizations initiated by HRP/H2O2/ACAC ternary initiating system and P2Ox-HRP cascade catalysis. The general characterization and analytical methods used in these enzyme-initiated RAFT polymerizations are also included.
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Affiliation(s)
- Xiao Wang
- Institute of Nanochemistry and Nanobiology, College of Environmental and Chemical Engineering, Shanghai University, Shanghai, China
| | - Zesheng An
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun, China.
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37
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Rifaie-Graham O, Pollard J, Raccio S, Balog S, Rusch S, Hernández-Castañeda MA, Mantel PY, Beck HP, Bruns N. Hemozoin-catalyzed precipitation polymerization as an assay for malaria diagnosis. Nat Commun 2019; 10:1369. [PMID: 30911004 PMCID: PMC6433922 DOI: 10.1038/s41467-019-09122-z] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 02/22/2019] [Indexed: 12/19/2022] Open
Abstract
Methods to diagnose malaria are of paramount interest to eradicate the disease. Current methods have severe limitations, as they are either costly or not sensitive enough to detect low levels of parasitemia. Here we report an ultrasensitive, yet low-resource chemical assay for the detection and quantification of hemozoin, a biomarker of all Plasmodium species. Solubilized hemozoin catalyzes the atom transfer radical polymerization of N-isopropylacrylamide above the lower critical solution temperature of poly(N-isopropylacrylamide). The solution becomes turbid, which can be observed by naked eye and quantified by UV-visible spectroscopy. The rate of turbidity increase is proportional to the concentration of hemozoin, with a detection limit of 0.85 ng mL-1. Malaria parasites in human blood can be detected down to 10 infected red blood cells μL-1. The assay could potentially be applied as a point-of-care test. The signal-amplification of an analyte by biocatalytic precipitation polymerization represents a powerful approach in biosensing.
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Affiliation(s)
- Omar Rifaie-Graham
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700, Fribourg, Switzerland
| | - Jonas Pollard
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700, Fribourg, Switzerland
| | - Samuel Raccio
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700, Fribourg, Switzerland
| | - Sandor Balog
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700, Fribourg, Switzerland
| | - Sebastian Rusch
- Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersgraben, 4000, Basel, Switzerland
| | | | - Pierre-Yves Mantel
- Department of Medicine, University of Fribourg, Route Albert-Gockel 1, 1700, Fribourg, Switzerland
| | - Hans-Peter Beck
- Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland
- University of Basel, Petersgraben, 4000, Basel, Switzerland
| | - Nico Bruns
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700, Fribourg, Switzerland.
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38
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Maniar D, Jiang Y, Woortman AJJ, van Dijken J, Loos K. Furan-Based Copolyesters from Renewable Resources: Enzymatic Synthesis and Properties. CHEMSUSCHEM 2019; 12:990-999. [PMID: 30637973 PMCID: PMC6563708 DOI: 10.1002/cssc.201802867] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2018] [Revised: 01/08/2019] [Indexed: 05/25/2023]
Abstract
Enzymatic polymerization provides an excellent opportunity for the conversion of renewable resources into polymeric materials in an effective and sustainable manner. A series of furan-based copolyesters was synthesized withM w ‾ up to 35 kg mol-1 , by using Novozyme 435 as a biocatalyst and dimethyl 2,5-furandicarboxylate (DMFDCA), 2,5-bis(hydroxymethyl)furan (BHMF), aliphatic linear diols, and diacid ethyl esters as monomers. The synthetic mechanism was evaluated by the variation of aliphatic linear monomers and their feed compositions. Interestingly, there was a significant decrease in the molecular weight if the aliphatic monomers were changed from diols to diacid ethyl esters. The obtained copolyesters were thoroughly characterized and compared with their polyester analogs. These findings provide a closer insight into the application of enzymatic polymerization techniques in designing sustainable high-performance polymers.
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Affiliation(s)
- Dina Maniar
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Yi Jiang
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Albert J. J. Woortman
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Jur van Dijken
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Katja Loos
- Macromolecular Chemistry and New Polymeric MaterialsZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
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39
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Cole JP, Federico CR, Lim CH, Miyake GM. Photoinduced Organocatalyzed Atom Transfer Radical Polymerization Using Low ppm Catalyst Loading. Macromolecules 2019; 52:747-754. [PMID: 30778265 PMCID: PMC6377258 DOI: 10.1021/acs.macromol.8b02688] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Photoinduced organocatalyzed atom-transfer radical polymerization (O-ATRP) is a controlled radical polymerization methodology that can be mediated by organic photoredox catalysts under the influence of light. However, typical O-ATRP systems require relatively high catalyst loadings (1000 ppm) to achieve control over the polymerization. Here, new core-extended diaryl dihydrophenazine photoredox catalysts were developed for O-ATRP and demonstrated to efficiently operate at low catalyst loadings of 5-50 ppm to produce polymers with excellent molecular weight control and low dispersity, while achieving near-quantitative initiator efficiency. Photophysical and electrochemical properties of the catalysts were computationally predicted and experimentally measured to correlate these properties with improved catalytic performance. Furthermore, these catalysts were utilized to synthesize materials with complex architectures, such as triblock copolymers and star polymers. To demonstrate their broad utility, polymerizations employing these catalysts were successfully scaled up to 5 g and revealed to efficiently operate under air.
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Affiliation(s)
- Justin P. Cole
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Celia R. Federico
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Chern-Hooi Lim
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Garret M. Miyake
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
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40
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Nothling MD, McKenzie TG, Eastland IA, Chien HC, Collins J, Meyer AS, Qiao GG. Self-deoxygenating glassware. Chem Commun (Camb) 2019; 55:8544-8547. [PMID: 31268065 DOI: 10.1039/c9cc03477c] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
The removal of dissolved oxygen (O2) from solution is a prerequisite for many reactions, frequently requiring specialized equipment/reagents or expertise. Herein, we introduce a range of reusable, shelf-stable enzyme-functionalized glassware, which biocatalytically removes O2 from contained aqueous solutions. The effectiveness of the activated glassware is demonstrated by facilitating several O2-intolerant RAFT polymerizations.
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Affiliation(s)
- Mitchell D Nothling
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia.
| | - Thomas G McKenzie
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia.
| | - Isaac A Eastland
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia.
| | - Hao-Che Chien
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia.
| | - Joe Collins
- Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Anne S Meyer
- Department of Biotechnology and Biomedicine, Technical University of Denmark, 2800 Kgs, Lyngby, Denmark
| | - Greg G Qiao
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia.
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41
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Preface. Methods Enzymol 2019; 627:xv-xix. [DOI: 10.1016/s0076-6879(19)30400-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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42
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Gajewska B, Raccio S, Rodriguez KJ, Bruns N. Chlorophyll derivatives as catalysts and comonomers for atom transfer radical polymerizations. Polym Chem 2019. [DOI: 10.1039/c8py01492b] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Derivatives of chlorophyll were investigated as both catalysts and comonomers to generate well-defined polymers with narrow dispersities under AGET ATRP conditions.
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Affiliation(s)
| | | | | | - Nico Bruns
- Adolphe Merkle Institute
- 1700 Fribourg
- Switzerland
- Department of Pure and Applied Chemistry
- University of Strathclyde
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43
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Enciso AE, Fu L, Lathwal S, Olszewski M, Wang Z, Das SR, Russell AJ, Matyjaszewski K. Biocatalytic “Oxygen‐Fueled” Atom Transfer Radical Polymerization. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201809018] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Alan E. Enciso
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Liye Fu
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Sushil Lathwal
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Mateusz Olszewski
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Zhenhua Wang
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Subha R. Das
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
| | - Alan J. Russell
- Department of Chemical Engineering Carnegie Mellon University 5000 Forbes Avenue Pittsburgh PA 15213 USA
| | - Krzysztof Matyjaszewski
- Department of Chemistry Carnegie Mellon University 4400 Fifth Avenue Pittsburgh PA 15213 USA
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44
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Enciso AE, Fu L, Lathwal S, Olszewski M, Wang Z, Das SR, Russell AJ, Matyjaszewski K. Biocatalytic "Oxygen-Fueled" Atom Transfer Radical Polymerization. Angew Chem Int Ed Engl 2018; 57:16157-16161. [PMID: 30329207 DOI: 10.1002/anie.201809018] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2018] [Revised: 09/25/2018] [Indexed: 01/06/2023]
Abstract
Atom transfer radical polymerization (ATRP) can be carried out in a flask completely open to air using a biocatalytic system composed of glucose oxidase (GOx) and horseradish peroxidase (HRP) with an active copper catalyst complex. Nanomolar concentrations of the enzymes and ppm amounts of Cu provided excellent control over the polymerization of oligo(ethylene oxide) methyl ether methacrylate (OEOMA500 ), generating polymers with high molecular weight (Mn >70 000) and low dispersities (1.13≤Đ≤1.27) in less than an hour. The continuous oxygen supply was necessary for the generation of radicals and polymer chain growth as demonstrated by temporal control and by inducing hypoxic conditions. In addition, the enzymatic cascade polymerization triggered by oxygen was used for a protein and DNA functionalized with initiators to form protein-b-POEOMA and DNA-b-POEOMA bioconjugates, respectively.
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Affiliation(s)
- Alan E Enciso
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Liye Fu
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Sushil Lathwal
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Mateusz Olszewski
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Zhenhua Wang
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Subha R Das
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Alan J Russell
- Department of Chemical Engineering, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA, 15213, USA
| | - Krzysztof Matyjaszewski
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
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