The origin of the split S3 EPR signal in Ca(2+)-depleted photosystem II: histidine versus tyrosine

Acquirement of water-splitting ability and alteration of the charge-separation mechanism in photosynthetic reaction centers

In photosynthetic reaction centers from purple bacteria (PbRC) and the water-oxidizing enzyme, photosystem II (PSII), charge separation occurs along one of the two symmetrical electron-transfer branches. Here we report the microscopic origin of the unidirectional charge separation, fully considering electron-hole interaction, electronic coupling of the pigments, and electrostatic interaction with the polarizable entire protein environments. The electronic coupling between the pair of bacteriochlorophylls is large in PbRC, forming a delocalized excited state with the lowest excitation energy (i.e., the special pair). The charge-separated state in the active branch is stabilized by uncharged polar residues in the transmembrane region and charged residues on the cytochrome c ₂ binding surface. In contrast, the accessory chlorophyll in the D1 protein (Chl_D1) has the lowest excitation energy in PSII. The charge-separated state involves Chl_D1 ^•+ and is stabilized predominantly by charged residues near the Mn₄CaO₅ cluster and the proceeding proton-transfer pathway. It seems likely that the acquirement of water-splitting ability makes Chl_D1 the initial electron donor in PSII.

Redox Potential of the Oxygen-Evolving Complex in the Electron Transfer Cascade of Photosystem II

In photosystem II (PSII), water oxidation occurs in the Mn₄CaO₅ cluster with the release of electrons via the redox-active tyrosine (TyrZ) to the reaction-center chlorophylls (P_D1/P_D2). Using a quantum mechanical/molecular mechanical approach, we report the redox potentials (E_m) of these cofactors in the PSII protein environment. The E_m values suggest that the Mn₄CaO₅ cluster, TyrZ, and P_D1/P_D2 form a downhill electron transfer pathway. E_m for the first oxidation step, E_m(S₀/S₁), is uniquely low (730 mV) and is ∼100 mV lower than that for the second oxidation step, E_m(S₁/S₂) (830 mV) only when the O4 site of the Mn₄CaO₅ cluster is protonated in S₀. The O4-water chain, which directly forms a low-barrier H-bond with the Mn₄CaO₅ cluster and mediates proton-coupled electron transfer in the S₀ to S₁ transition, explains why the second lowest oxidation state, S₁, is the most stable and S₀ is converted to S₁ even in the dark.

Redox potentials along the redox-active low-barrier H-bonds in electron transfer pathways

Local proton transfer along redox-active low-barrier H-bonds can alter the driving force or electronic coupling for electron transfer, as the redox potential values depend on the H⁺ position in low-barrier H-bonds.

Stability of organic compounds on the oxygen-evolving center of photosystem II and manganese oxide water oxidation catalysts

Carboxyl groups, abundant residues around the Mn₄cluster of photosystem II, stably facilitated electrochemical water oxidation by Mn oxides.

The PSII calcium site revisited

Oxidation of H2O by photosystem II is a unique redox reaction in that it requires Ca2+ as well as Cl- as obligatory activators/cofactors of the reaction, which is catalyzed by Mn atoms. The properties of the binding site for Ca2+ in this reaction resemble those of other Ca2+ binding proteins, and recent X-ray structural data confirm that the metal is in fact ligated at least in part by amino acid side chain oxo anions. Removal of Ca2+ blocks water oxidation chemistry at an early stage in the cycle of redox reactions that result in O-O bond formation, and the intimate involvement of Ca2+ in this reaction that is implied by this result is confirmed by an ever-improving set of crystal structures of the cyanobacterial enzyme. Here, we revisit the photosystem II Ca2+ site, in part to discuss the additional information that has appeared since our earlier review of this subject (van Gorkom HJ, Yocum CF In: Wydrzynski TJ, Satoh K (eds) Photosystem II: the light-driven water:plastoquinone oxidoreductase), and also to reexamine earlier data, which lead us to conclude that all S-state transitions require Ca2+.

Electrogenic protonation of the secondary quinone acceptor Q(B) in spinach photosystem II complexes incorporated into lipid vesicles

The generation of transmembrane electric potential difference (delta psi) in quinone acceptor complex of proteoliposomes containing core complexes of photosystem II from spinach was studied using for the measurements a direct electrometric technique. Besides the fast increase in the membrane potential associated with the electron transfer between the redox-active tyrosine 161 residue (Y(Z)) in D1 polypeptide and the primary quinone acceptor Q(A), an additional electrogenic phase with tau approximately 0.85 msec at pH 7.3 and the maximal relative amplitude of approximately 11% of the Y(Z)ox Q(A)- phase was observed after the second light flash. The sensitivity of this phase to diuron (an inhibitor of electron transfer between Q(A) and the secondary quinone acceptor Q(B)), the dependence of its amplitude on the light flash parity, and also a decrease in its rate constant with increase in pH indicated that it was due to dismutation of Q(A)- and Q(B)- with the subsequent protonation of a doubly reduced plastoquinone molecule: Q(A)- Q(B)- + 2H+ --> Q(A)Q(B)H2.

Structural Effects of Calcium Depletion on the Manganese Cluster of Photosystem II: Determination by X-ray Absorption Spectroscopy

The structural consequences of calcium depletion of Photosystem II (PS II) by treatment at pH 3.0 in the presence of citrate has been determined by Mn K-edge X-ray absorption spectroscopy. X-ray absorption edge spectroscopy of Ca-depleted samples in the S1', S2', and S3' oxidation states reveals that there is Mn oxidation on the S1'-S2' transition, although no evidence of Mn oxidation was found for the S2'-S3' transition. This result is in keeping with the results from EPR studies where it has been found that the species oxidized to give the S3' broad radical signal found in Ca-depleted PS II is tyrosine Yz. The S2' state can be prepared by two methods: illumination followed by dark adaptation and illumination in the presence of DCMU to limit to one turnover. Illumination followed by dark adaptation was found to yield a lower Mn K-edge inflection-point energy than illumination with DCMU, indicating vulnerability to reduction of the Mn complex, even over the relatively short times used for dark adaptation (~15 min). EXAFS measurements of Ca-depleted samples in the three modified S states (referred to here as S' states) reveals that the Fourier peak due to scatterers at ~3.3 Å from Mn is strongly diminished, consistent with our previous assignment of a Ca-scattering contribution at this distance. Even after Ca depletion, there is still significant amplitude in the third peak, further supporting our conclusions from earlier studies that the third peak in native samples is comprised of both Mn and Ca scattering. The Mn-Mn contributions making up the second Fourier peak at ~2.7 Å are largely undisturbed by Ca-depletion, but there is some evidence that S1'-state samples contain significant amounts of reduced Mn(II), which is then photooxidized in the preparation of higher S' states.

Proximity of the manganese cluster of photosystem II to the redox-active tyrosine YZ

Electron spin echo electron-nuclear double resonance (ESE-ENDOR) experiments performed on a broad radical electron paramagnetic resonance (EPR) signal observed in photosystem II particles depleted of Ca2+ indicate that this signal arises from the redox-active tyrosine YZ. The tyrosine EPR signal width is increased relative to that observed in a manganese-depleted preparation due to a magnetic interaction between the photosystem II manganese cluster and the tyrosine radical. The manganese cluster is located asymmetrically with respect to the symmetry-related tyrosines YZ and YD. The distance between the YZ tyrosine and the manganese cluster is estimated to be approximately 4.5 A. Due to this close proximity of the Mn cluster and the redox-active tyrosine YZ, we propose that this tyrosine abstracts protons from substrate water bound to the Mn cluster.

Investigation of the ammonium chloride and ammonium acetate inhibition of oxygen evolution by Photosystem II

Using EPR and EXAFS spectroscopies we show that high concentrations of ammonium cations at alkaline pH are required for (1) inhibition of oxygen evolution: (2) an alteration of the EPR properties of the oxygen evolving complex: (3) the ability to detect YZ; and (4) the slow reduction of the Mn complex leading to the appearance of EPR detectable Mn2+. The inhibition of S state cycling, slowing of YZ reduction, appearance of Mn2+ and the yield of a Hpp < 10 mT S3 type EPR signal are decreased by calcium addition. This indicates that these effects were probably associated with calcium depletion arising from the high concentration of ammonium cation. The ammonia-induced changes to the S2 multiline EPR signal are not affected by calcium addition. The appearance of Mn2+ is shown to be reversible on illumination, suggesting that the Mn reduced from the native state is located at or near the native site. Simulations of the interaction which give rise to the S3 EPR signal are also presented and discussed. These indicate that lineshape differences occur through small changes in the exchange component of the interaction between the manganese complex and organic radical, probably through minor structural changes between the variously treated samples.

Investigation of the S3 electron paramagnetic resonance signal from the oxygen-evolving complex of photosystem 2: effect of inhibition of oxygen evolution by acetate

An S3 electron paramagnetic resonance (EPR) signal is observed in a variety of photosystem 2 (PS2) samples in which the oxygen-evolving complex (OEC) has been inhibited. These signals have been proposed to be due to an interaction, S2X+, between the manganese cluster in an oxidation state equivalent to S2 and an organic radical, either oxidized histidine [Boussac et al. (1990) Nature 347, 303-306] or the tyrosine radical Yz+ [Hallahan et al. (1992) Biochemistry 31, 4562-4573]. We report that treatment of PS2 with acetate at pH 5.5 leads to a slowing of the reduction of Yz+ and allows the trapping of an S3-type state on freezing to 77 K following illumination at 277 K. The S3 EPR signal in acetate-treated PS2 has a broader and more complex line shape but otherwise has similar properties to other S3 signals. The addition to acetate-treated samples in the S1 state of the herbicide 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), which allows only a single turnover of the reaction center, causes a large reduction in the yield of the S3 signal. Various anion and cation treatments change the S3 signal line shape and are used to show that acetate probably acts by binding and displacing chloride. We propose that a variety of treatments which affect calcium and chloride cofactor binding cause a modification of the S2 state of the manganese cluster, slow the reduction of Yz+, and allow an S3 EPR signal to be observed following illumination.(ABSTRACT TRUNCATED AT 250 WORDS)

Flash induced XANES spectroscopy for the Ca-depleted Mn-cluster in the photosynthetic O2-evolving enzyme

Flash-induced changes of the Mn K-edge absorption spectra have been studied in the oxygen-evolving complex depleted of Ca. The Mn K-edge energy for the Ca-depleted S1-state was lower by 1.5 eV than that for the normal S1-state. The K-edge energy upshifted by 1 eV after one flash, indicative of an oxidation of Mn. After two flashes, the K-edge was elevated as well by 0.4 eV, and then reached a steady-state high level after continuous illumination where the K-edge energy was higher by 0.9 eV than that after one flash. The results indicate that the Mn-cluster and/or its direct ligand could be oxidized up to two electrons but further events are blocked.

Protein-radical enzymes

Protein-radical enzymes use a free radical located on an intrinsic amino acid residue as a cofactor. The amino acid involved can be a tyrosine (ribonucleotide reductase, photosystem II, prostaglandin H synthase), a modified tyrosine (amine oxidase, galactose oxidase), a tryptophan (cytochrome c peroxidase), a modified tryptophan (methylamine dehydrogenase) or a glycine (ribonucleotide reductase, pyruvate formate lyase). The mechanistic role of these radicals appears to be that of a one-electron gate, allowing the separation of single reducing equivalents in time and space.

The role of redox-active amino acids in the photosynthetic water-oxidizing complex

The protein environment can dramatically affect the EPR line shape of tyrosine radicals. The alterations can be caused by: (1) a change in methylene geometry caused by different protein steric constraints; (2) a change in spin density caused by a change in protein environment; or (3) covalent modification of the tyrosine. Any or all of these effects may also be important, in some cases, in control of oxidation potential and chemical reactivity. The new signal that has been observed in the YF161D1 PS II mutant has an approximate 1:3:3:1 lineshape. There is no precedent for a 1:3:3:1 EPR signal from a tyrosine in a powder sample. However, as described above, given the diversity of signals from tyrosine radicals, it is impossible to exclude the possibility that the signal arises from tyrosine on this basis.