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Suárez L, Kosar AJ, Dodd EL, Tazoo D, Lambert AC, Bohle DS. Soluble meso and deuteroporphyrin analogs of the malaria pigment hematin anhydride. J Inorg Biochem 2024; 252:112470. [PMID: 38218137 DOI: 10.1016/j.jinorgbio.2023.112470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 12/18/2023] [Accepted: 12/18/2023] [Indexed: 01/15/2024]
Abstract
Two soluble heme analogs of the insoluble malaria pigment hematin anhydride (HA, or β-hematin), [Fe(III)(protoporphyrin)]2, with either mesoporphyrin (MHA) or deuteroporphyrin (DHA) are characterized by elemental analysis, SEM, IR spectroscopy, electronic spectroscopy, paramagnetic 1H NMR spectroscopy and solution magnetic susceptibility. While prior single crystal and X-ray powder diffraction results indicate all three have a common propionate linked dimer motif, there is considerable solid state variation in the conformation. This is associated with enhanced solubility of MHA and DHA. As with HA, DHA undergoes thermally promoted reversible hydration/dehydration in the solid state. Solution 1H NMR studies of DHA suggest a high spin dimeric structure with the porphyrin methyls distributed between two isomers which are also present in the solid state. These soluble iron(III)porphyrin dimers allow for the first direct solution studies by NMR and UV-Vis spectroscopies of these key species. Taken together the results illustrate the importance and utility of varying the substituents on the periphery of the porphyrin for studying heme aggregation and malaria pigment formation.
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Affiliation(s)
- Liliana Suárez
- Department of Chemistry, McGill University, 801 Sherbrooke St. W., Montreal H3A 0B8, Canada
| | - Aaron J Kosar
- Department of Chemistry, McGill University, 801 Sherbrooke St. W., Montreal H3A 0B8, Canada
| | - Erin L Dodd
- Département de Chimie de l'UQAM, 2101, rue Jeanne-Mance, Montréal H2X 2J6, Canada
| | - Dagobert Tazoo
- Department of Chemistry, McGill University, 801 Sherbrooke St. W., Montreal H3A 0B8, Canada
| | | | - D Scott Bohle
- Department of Chemistry, McGill University, 801 Sherbrooke St. W., Montreal H3A 0B8, Canada.
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Spectroscopic and Kinetic Characterization of Peroxidase-Like π-Cation Radical Pinch-Porphyrin-Iron(III) Reaction Intermediate Models of Peroxidase Enzymes. Molecules 2016; 21:molecules21070804. [PMID: 27355940 PMCID: PMC6273987 DOI: 10.3390/molecules21070804] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Revised: 06/01/2016] [Accepted: 06/13/2016] [Indexed: 11/17/2022] Open
Abstract
The spectroscopic and kinetic characterization of two intermediates from the H₂O₂ oxidation of three dimethyl ester [(proto), (meso), (deuteroporphyrinato) (picdien)]Fe(III) complexes ([FePPPic], [FeMPPic] and [FeDPPic], respectively) pinch-porphyrin peroxidase enzyme models, with s = 5/2 and 3/2 Fe(III) quantum mixed spin (qms) ground states is described herein. The kinetic study by UV/Vis at λmax = 465 nm showed two different types of kinetics during the oxidation process in the guaiacol test for peroxidases (1-3 + guaiacol + H₂O₂ → oxidation guaiacol products). The first intermediate was observed during the first 24 s of the reaction. When the reaction conditions were changed to higher concentration of pinch-porphyrins and hydrogen peroxide only one type of kinetics was observed. Next, the reaction was performed only between pinch-porphyrins-Fe(III) and H₂O₂, resulting in only two types of kinetics that were developed during the first 0-4 s. After this time a self-oxidation process was observed. Our hypotheses state that the formation of the π-cation radicals, reaction intermediates of the pinch-porphyrin-Fe(III) family with the ligand picdien [N,N'-bis-pyridin-2-ylmethyl-propane-1,3-diamine], occurred with unique kinetics that are different from the overall process and was involved in the oxidation pathway. UV-Vis, ¹H-NMR and ESR spectra confirmed the formation of such intermediates. The results in this paper highlight the link between different spectroscopic techniques that positively depict the kinetic traits of artificial compounds with enzyme-like activity.
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Gussoni M, Scorciapino MA, Vezzoli A, Anedda R, Greco F, Ceccarelli M, Casu M. Structural characterization of recombinant human myoglobin isoforms by 1H and 129Xe NMR and molecular dynamics simulations. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2011; 1814:1919-29. [DOI: 10.1016/j.bbapap.2011.06.014] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2011] [Revised: 06/22/2011] [Accepted: 06/27/2011] [Indexed: 10/18/2022]
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Wüthrich K, Baumann R. Hyperfine Shifts of the13C-NMR. in Protoporphyrin IX Iron (III) Dicyanide and Deuteroporphyrin IX Iron (III) Dicyanide. Helv Chim Acta 2004. [DOI: 10.1002/hlca.19740570208] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Sánchez-Sandoval A, Ramírez-Rosales D, Zamorano-Ulloa R, Alvarez-Toledano C, Moya-Cabrera M, Reyes-Ortega Y. New pinch-porphyrin complexes with quantum mixed spin ground state S=, of iron (III) and their catalytic activity as peroxidase. Biophys Chem 2003; 106:253-65. [PMID: 14556897 DOI: 10.1016/s0301-4622(03)00186-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
New complexes of the pinch-porphyrin family were obtained from the dimethylester of (proto-, meso-, and deutero-porphyrinato)iron(III) with the ligand [N,N'-bis-pyridin-2-ylmethyl-propane-1,3-diamine] 1-3 and with the ligand [N-pyridin-2-ylmethyl-N'-[3-[(pyridin-2-ylmethyl)-amino]-propyl]-propane-1,3-diamine] 4-6. The UV/VIS studies of 1-6 indicate an increase in the distortion of the ligand field excited state. The 1H NMR spectra of 1-6 at RT and over the range 223-328 K show iron(III)-complexes with quantum mixed spin state (qms) S=5/2, S=3/2. The chemical shifts of the meso protons are consistent with qms state S=3/2, S=5/2, where the S=3/2 spin state is lowest in energy. For methyl-heme the chemical shifts are also consistent with a qms state but now the S=5/2 ground state is lowest in energy. ESR spectra of 1-6 show two different species, B and C, of iron(III) with qms, S=5/2, S=3/2 consistent with the 1H NMR results. Species B with 70% of S=5/2 and species C with 72.5% of S=3/2. The catalytic activity as peroxidase of 1-6 was quantified by guaiacol test; their theoretical maximum rate constants were k(cat) approximately 10(2)-10(3) M(-1) s(-1). A quantitative empirical correlation is found: the higher the 32 spin contribution to the qms state and the higher proportion of this species into the samples, the higher the peroxidase activity. Such a correlation was also obtained for pinch-porphyrins already reported.
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Affiliation(s)
- Amparo Sánchez-Sandoval
- Centro de Química, Instituto de Ciencias, Universidad Autónoma de Puebla. 14 Sur 6301. Col. San Manuel, Puebla, Pue 72570, Mexico
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Fattorusso R, De Pasquale C, Morelli G, Pedone C. Hemoprotein models based on a covalent helix-heme-helix sandwich 4. Discrimination of paramagnetic Fe(III)-Mimochrome I Δ and Λ isomers by NMR spectroscopy. Inorganica Chim Acta 1998. [DOI: 10.1016/s0020-1693(98)00003-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Medhi O, Houlton A, Silver J. A six-coordinate high spin protoporphyrin IX iron(III) complex as a model for ferric haemproteins: Mössbauer spectrum of bisaquo(protoporphyrinato IX)iron(III) encapsulated in aqueous detergent micelles. Inorganica Chim Acta 1989. [DOI: 10.1016/s0020-1693(00)83095-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Neya S, Funasaki N, Imai K. Structure and function of the myoglobin containing octaethylhemin as a prosthetic group. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(18)68378-4] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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Lee RW, Oldfield E. Nuclear magnetic resonance of hemeprotein crystals. Structure of the heme in Physeter catodon ferrimyoglobin and an analysis of hyperfine shifts. J Biol Chem 1982. [DOI: 10.1016/s0021-9258(18)34629-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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La Mar GN, Budd DL, Smith KM. Heme methyl hyperfine-shifted nuclear magnetic resonance peaks assigned by selective deuteration as indicators of heme-protein interactions in metmyoglobins. BIOCHIMICA ET BIOPHYSICA ACTA 1980; 622:210-8. [PMID: 7378450 DOI: 10.1016/0005-2795(80)90032-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
The heme methyl resonances in a variety of high-spin, low-spin and spin-equilibrium forms of sperm whale metmyoglobin have been assigned by reconstituting myoglobin with selectively deuterated hemes. Two patterns for the heme methyl hyperfine shifts are observed, one characteristic of the low-spin state and the other typical of the high-spin state. The two protein forms which can change the position of their spin equilibrium significantly with changing temperature exhibit the pattern of the dominant spin state component at any temperature. The different hyperfine shift patterns for the low-spin and high-spin states are concluded to arise not from different heme-protein contacts in the two spin states, but from characteristic differential sensitivities of the dominant spin transfer mechanisms to the same rhombic perturbation.
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Neya S, Morishima I. Proton NMR study of methemoglobin and its isolated chains. Effect of the subunit association on the structure of the subunits. J Biol Chem 1979. [DOI: 10.1016/s0021-9258(19)86817-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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13
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Fairhurst SA, Sutcliffe LH. The application of spectroscopy to the study of iron-containing biological molecules. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 1979; 34:1-79. [PMID: 212782 DOI: 10.1016/0079-6107(79)90014-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Jones WC, Rothgeb TM, Gurd FR. Nuclear magnetic resonance studies of sperm whale myoglobin specifically enriched with 13C in the methionine methyl groups. J Biol Chem 1976. [DOI: 10.1016/s0021-9258(17)32870-3] [Citation(s) in RCA: 70] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Fung LW, Minton AP, Ho C. Nuclear magnetic resonance study of heme-heme interaction in hemoglobin M Milwaukee: implications concerning the mechanism of cooperative ligand binding in normal hemoglobin. Proc Natl Acad Sci U S A 1976; 73:1581-5. [PMID: 1064027 PMCID: PMC430342 DOI: 10.1073/pnas.73.5.1581] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Hemoglobin M Milwaukee (beta 67E11 val leads to Glu) is a naturally occurring valency hybrid containing two permanently oxidized hemes in the beta-chains. In this mutant, the two abnormal beta-chains cannot combine with oxygen, whereas the two alpha-chains are normal and can combine with oxygen cooperatively with a Hill coefficient of approximately 1.3. High-resolution proton nuclear magnetic resonance spectroscopy at 250 MHz has been used to investigate the hyperfine shifted resonances of the abnormal ferric beta-chains of Hb M Milwaukee over the spectral region from -30 to -60 parts per million from water at pD 7 and 30 degrees.
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Oster O, Neireiter GW, Clouse AO, Gurd FR. Deuterium nuclear magnetic resonance of deuterium-labeled diacetyldeuterohemin incorporated into sperm whale myoglobin. J Biol Chem 1975. [DOI: 10.1016/s0021-9258(19)40805-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Feher G, Isaacson RA, Scholes CP, Nagel R. Electron nuclear double resonance (ENDOR) investigation on myoglobin and hemoglobin. Ann N Y Acad Sci 1973; 222:86-101. [PMID: 4361886 DOI: 10.1111/j.1749-6632.1973.tb15254.x] [Citation(s) in RCA: 43] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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19
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Ho C, Lindstrom TR, Baldassare JJ, Breen JJ. Magnetic resonance studies of human hemoglobins and their implications to the structure-function relationships in human normal and abnormal hemoglobins. Ann N Y Acad Sci 1973; 222:21-39. [PMID: 4361855 DOI: 10.1111/j.1749-6632.1973.tb15250.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Makino R, Yamazaki I. Effects of 2,4-substituents of deuteroheme upon peroxidase functions. II. Reactions of peroxidases and metmyoglobin with azide, cyanide and fluoride. Arch Biochem Biophys 1973; 157:356-68. [PMID: 4354318 DOI: 10.1016/0003-9861(73)90650-4] [Citation(s) in RCA: 35] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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22
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Lamson DW, Yonetani T. Oxymercuration-demercuration of protohemin IX preparation of hematohemin IX dimethyl ether. Tetrahedron Lett 1973. [DOI: 10.1016/s0040-4039(01)87639-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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23
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Lindstrom TR, Ho C. Functional nonequivalence of and hemes in human adult hemoglobin. Proc Natl Acad Sci U S A 1972; 69:1707-10. [PMID: 4505648 PMCID: PMC426783 DOI: 10.1073/pnas.69.7.1707] [Citation(s) in RCA: 64] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Nuclear magnetic resonance studies of the contact-shifted spectra of heme protons in deoxyhemoglobin A from human adults show conclusively that oxygen binds to the alpha hemes in preference to the beta hemes. The preferential binding is produced in 10% hemoglobin solution at neutral pH by either a 15-fold molar excess of 2,3-diphosphoglycerate or a 5-fold molar excess of inositol hexaphosphate. Preferential binding is not observable in the absence of the organic phosphates. The results indicate that the oxygenation of hemoglobin may be described by a sequential model, or by a concerted model that allows the alpha hemes to bind ligand first.
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Lindstrom TR, Ho C, Pisciotta AV. Nuclear magnetic resonance studies of haemoglobin M Milwaukee. NATURE: NEW BIOLOGY 1972; 237:263-4. [PMID: 4504457 DOI: 10.1038/newbio237263a0] [Citation(s) in RCA: 38] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Ho C, Lindstrom TR. Functional non-equivalence of and hemes in human hemoglobins. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 1972; 28:65-76. [PMID: 5085187 DOI: 10.1007/978-1-4684-3222-0_5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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