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Abellanas-Perez P, Carballares D, Fernandez-Lafuente R, Rocha-Martin J. Glutaraldehyde modification of lipases immobilized on octyl agarose beads: Roles of the support enzyme loading and chemical amination of the enzyme on the final enzyme features. Int J Biol Macromol 2023; 248:125853. [PMID: 37460068 DOI: 10.1016/j.ijbiomac.2023.125853] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 07/13/2023] [Accepted: 07/14/2023] [Indexed: 07/25/2023]
Abstract
Lipase B from Candida antarctica (CALB) and lipase from Thermomyces lanuginosus (TLL) have been immobilized on octyl agarose at low loading and at a loading exceeding the maximum support capacity. Then, the enzymes have been treated with glutaraldehyde and inactivated at pH 7.0 in Tris-HCl, sodium phosphate and HEPES, giving different stabilities. Stabilization (depending on the buffer) of the highly loaded biocatalysts was found, very likely as a consequence of the detected intermolecular crosslinkings. This did not occur for the lowly loaded biocatalysts. Next, the enzymes were chemically aminated and then treated with glutaraldehyde. In the case of TLL, the intramolecular crosslinkings (visible by the apparent reduction of the protein size) increased enzyme stability of the lowly loaded biocatalysts, an effect that was further increased for the highly loaded biocatalysts due to intermolecular crosslinkings. Using CALB, the intramolecular crosslinkings were less intense, and the stabilization was lower, even though the intermolecular crosslinkings were quite intense for the highly loaded biocatalyst. The stabilization detected depended on the inactivation buffer. The interactions between enzyme loading and inactivating buffer on the effects of the chemical modifications suggest that the modification and inactivation studies must be performed under the target biocatalysts and conditions.
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Affiliation(s)
| | - Diego Carballares
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, 28049 Madrid, Spain
| | | | - Javier Rocha-Martin
- Department of Biochemistry and Molecular Biology, Faculty of Biological Sciences, Complutense University of Madrid, 28040 Madrid Spain.
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2
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Martí D, Martín-Martínez E, Torras J, Betran O, Turon P, Alemán C. In silico study of substrate chemistry effect on the tethering of engineered antibodies for SARS-CoV-2 detection: Amorphous silica vs gold. Colloids Surf B Biointerfaces 2022; 213:112400. [PMID: 35158221 PMCID: PMC8820101 DOI: 10.1016/j.colsurfb.2022.112400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Revised: 02/04/2022] [Accepted: 02/04/2022] [Indexed: 11/26/2022]
Abstract
The influence of the properties of different solid substrates on the tethering of two antibodies, IgG1-CR3022 and IgG1-S309, which were specifically engineered for the detection of SARS-CoV-2, has been examined at the molecular level using conventional and accelerated Molecular Dynamics (cMD and aMD, respectively). Two surfaces with very different properties and widely used in immunosensors for diagnosis, amorphous silica and the most stable facet of the face-centered cubic gold structure, have been considered. The effects of such surfaces on the structure and orientation of the immobilized antibodies have been determined by quantifying the tilt and hinge angles that describe the orientation and shape of the antibody, respectively, and the dihedrals that measure the relative position of the antibody arms with respect to the surface. Results show that the interactions with amorphous silica, which are mainly electrostatic due to the charged nature of the surface, help to preserve the orientation and structure of the antibodies, especially of the IgG1-CR3022, indicating that the primary sequence of those antibodies also plays some role. Instead, short-range van der Waals interactions with the inert gold surface cause a higher degree tilting and fraying of the antibodies with respect to amorphous silica. The interactions between the antibodies and the surface also affect the correlation among the different angles and dihedrals, which increases with their strength. Overall, results explain why amorphous silica substrates are frequently used to immobilize antibodies in immunosensors.
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Affiliation(s)
- Didac Martí
- Departament d'Enginyeria Química (DEQ), EEBE, Universitat Politècnica de Catalunya (UPC), C/ Eduard Maristany, 10-14, Ed. I2, 08019 Barcelona, Spain; Barcelona Research Center in Multiscale Science and Engineering, Universitat Politècnica de Catalunya, C/ Eduard Maristany, 10-14, 08019 Barcelona, Spain
| | - Eduard Martín-Martínez
- Departament d'Enginyeria Química (DEQ), EEBE, Universitat Politècnica de Catalunya (UPC), C/ Eduard Maristany, 10-14, Ed. I2, 08019 Barcelona, Spain
| | - Juan Torras
- Departament d'Enginyeria Química (DEQ), EEBE, Universitat Politècnica de Catalunya (UPC), C/ Eduard Maristany, 10-14, Ed. I2, 08019 Barcelona, Spain; Barcelona Research Center in Multiscale Science and Engineering, Universitat Politècnica de Catalunya, C/ Eduard Maristany, 10-14, 08019 Barcelona, Spain.
| | - Oscar Betran
- Departament de Física, EETAC, Universitat Politècnica de Catalunya (UPC), c/ Esteve Terrades, 7, 08860 Castelldefels, Spain
| | - Pau Turon
- B. Braun Surgical, S.A.U. Carretera de Terrasa 121, Rubí, 08191 Barcelona, Spain.
| | - Carlos Alemán
- Departament d'Enginyeria Química (DEQ), EEBE, Universitat Politècnica de Catalunya (UPC), C/ Eduard Maristany, 10-14, Ed. I2, 08019 Barcelona, Spain; Barcelona Research Center in Multiscale Science and Engineering, Universitat Politècnica de Catalunya, C/ Eduard Maristany, 10-14, 08019 Barcelona, Spain; Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology, Baldiri Reixac 10-12, 08028 Barcelona, Spain.
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3
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Neurothreads: Development of supportive carriers for mature dopaminergic neuron differentiation and implantation. Biomaterials 2021; 270:120707. [PMID: 33601130 DOI: 10.1016/j.biomaterials.2021.120707] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Revised: 01/28/2021] [Accepted: 01/31/2021] [Indexed: 12/16/2022]
Abstract
In this study we present the use of elastic macroporous cryogels for differentiation and transplantation of mature neurons. We develop a coating suitable for long-term neuronal culture, including stem cell differentiation, by covalent immobilization of neural adhesion proteins. In the context of cell therapy for Parkinson's disease, we show compatibility with established dopaminergic differentiation of both immortalized mesencephalic progenitors - LUHMES - and human embryonic stem cells (hESCs). We adjust structural properties of the biomaterial to create carriers - Neurothreads - favourable for cell viability during transplantation. Finally, we show feasibility of preservation of mature neurons, supported by Neurothreads, one month after in-vivo transplantation. Preliminary data suggests that the Neurothread approach could provide more mature and less proliferative cells in vivo.
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4
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Dutta S. Exoskeleton for Biofunctionality Protection of Enzymes and Proteins for Intracellular Delivery. ADVANCED NANOBIOMED RESEARCH 2021. [DOI: 10.1002/anbr.202000010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Affiliation(s)
- Saikat Dutta
- Biological & Molecular Science Laboratory, Amity Institute of Click Chemistry Research & Studies Amity University Sector 125 Noida India
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5
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Abstract
Dextran aldehyde (dexOx), resulting from the periodate oxidative cleavage of 1,2-diol moiety inside dextran, is a polymer that is very useful in many areas, including as a macromolecular carrier for drug delivery and other biomedical applications. In particular, it has been widely used for chemical engineering of enzymes, with the aim of designing better biocatalysts that possess improved catalytic properties, making them more stable and/or active for different catalytic reactions. This polymer possesses a very flexible hydrophilic structure, which becomes inert after chemical reduction; therefore, dexOx comes to be highly versatile in a biocatalyst design. This paper presents an overview of the multiple applications of dexOx in applied biocatalysis, e.g., to modulate the adsorption of biomolecules on carrier surfaces in affinity chromatography and biosensors design, to serve as a spacer arm between a ligand and the support in biomacromolecule immobilization procedures or to generate artificial microenvironments around the enzyme molecules or to stabilize multimeric enzymes by intersubunit crosslinking, among many other applications.
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6
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Yang Y, Wang S, Zhou Z, Zhang R, Shen H, Song J, Su P, Yang Y. Enhanced reusability and activity: DNA directed immobilization of enzyme on polydopamine modified magnetic nanoparticles. Biochem Eng J 2018. [DOI: 10.1016/j.bej.2018.05.019] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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Integrating enzyme immobilization and protein engineering: An alternative path for the development of novel and improved industrial biocatalysts. Biotechnol Adv 2018; 36:1470-1480. [DOI: 10.1016/j.biotechadv.2018.06.002] [Citation(s) in RCA: 168] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Revised: 05/02/2018] [Accepted: 06/04/2018] [Indexed: 12/15/2022]
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Viñambres M, Filice M, Marciello M. Modulation of the Catalytic Properties of Lipase B from Candida antarctica by Immobilization on Tailor-Made Magnetic Iron Oxide Nanoparticles: The Key Role of Nanocarrier Surface Engineering. Polymers (Basel) 2018; 10:E615. [PMID: 30966649 PMCID: PMC6404122 DOI: 10.3390/polym10060615] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 05/27/2018] [Accepted: 05/30/2018] [Indexed: 11/16/2022] Open
Abstract
The immobilization of biocatalysts on magnetic nanomaterial surface is a very attractive alternative to achieve enzyme nanoderivatives with highly improved properties. The combination between the careful tailoring of nanocarrier surfaces and the site-specific chemical modification of biomacromolecules is a crucial parameter to finely modulate the catalytic behavior of the biocatalyst. In this work, a useful strategy to immobilize chemically aminated lipase B from Candida antarctica on magnetic iron oxide nanoparticles (IONPs) by covalent multipoint attachment or hydrophobic physical adsorption upon previous tailored engineering of nanocarriers with poly-carboxylic groups (citric acid or succinic anhydride, CALBEDA@CA-NPs and CALBEDA@SA-NPs respectively) or hydrophobic layer (oleic acid, CALBEDA@OA-NPs) is described. After full characterization, the nanocatalysts have been assessed in the enantioselective kinetic resolution of racemic methyl mandelate. Depending on the immobilization strategy, each enzymatic nanoderivative permitted to selectively improve a specific property of the biocatalyst. In general, all the immobilization protocols permitted loading from good to high lipase amount (149 < immobilized lipase < 234 mg/gFe). The hydrophobic CALBEDA@OA-NPs was the most active nanocatalyst, whereas the covalent CALBEDA@CA-NPs and CALBEDA@SA-NPs were revealed to be the most thermostable and also the most enantioselective ones in the kinetic resolution reaction (almost 90% ee R-enantiomer). A strategy to maintain all these properties in long-time storage (up to 1 month) by freeze-drying was also optimized. Therefore, the nanocarrier surface engineering is demonstrated to be a key-parameter in the design and preparation of lipase libraries with enhanced catalytic properties.
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Affiliation(s)
- Mario Viñambres
- Department of Biomaterials and Bioinspired Material, Materials Science Institute of Madrid (ICMM-CSIC), Sor Juana Inés de la Cruz 3, Cantoblanco, 28049 Madrid, Spain.
| | - Marco Filice
- Department of Chemistry in Pharmaceutical Sciences, Faculty of Pharmacy, Complutense University (UCM), Plaza Ramón y Cajal, 28040 Madrid, Spain.
- National Research Centre for Cardiovascular Disease (CNIC), C/Melchor Fernández-Almagro 3, 28029 Madrid, Spain.
- Biomedical Research Networking Center for Respiratory Diseases (CIBERES), C/Melchor Fernández-Almagro 3, 28029 Madrid, Spain.
| | - Marzia Marciello
- Department of Biomaterials and Bioinspired Material, Materials Science Institute of Madrid (ICMM-CSIC), Sor Juana Inés de la Cruz 3, Cantoblanco, 28049 Madrid, Spain.
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Silva C, Martins M, Jing S, Fu J, Cavaco-Paulo A. Practical insights on enzyme stabilization. Crit Rev Biotechnol 2017; 38:335-350. [PMID: 28764566 DOI: 10.1080/07388551.2017.1355294] [Citation(s) in RCA: 115] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
Enzymes are efficient catalysts designed by nature to work in physiological environments of living systems. The best operational conditions to access and convert substrates at the industrial level are different from nature and normally extreme. Strategies to isolate enzymes from extremophiles can redefine new operational conditions, however not always solving all industrial requirements. The stability of enzymes is therefore a key issue on the implementation of the catalysts in industrial processes which require the use of extreme environments that can undergo enzyme instability. Strategies for enzyme stabilization have been exhaustively reviewed, however they lack a practical approach. This review intends to compile and describe the most used approaches for enzyme stabilization highlighting case studies in a practical point of view.
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Affiliation(s)
- Carla Silva
- a Centre of Biological Engineering (CEB) , University of Minho , Braga , Portugal
| | - Madalena Martins
- a Centre of Biological Engineering (CEB) , University of Minho , Braga , Portugal
| | - Su Jing
- b International Joint Research Laboratory for Textile and Fiber Bioprocesses , Jiangnan University , Wuxi , China
| | - Jiajia Fu
- c Key Laboratory of Science and Technology of Eco-Textiles , Ministry of Education, Jiangnan University , Wuxi , Jiangsu , China
| | - Artur Cavaco-Paulo
- a Centre of Biological Engineering (CEB) , University of Minho , Braga , Portugal.,b International Joint Research Laboratory for Textile and Fiber Bioprocesses , Jiangnan University , Wuxi , China
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Robert V, Monza E, Tarrago L, Sancho F, De Falco A, Schneider L, Npetgat Ngoutane E, Mekmouche Y, Pailley PR, Simaan AJ, Guallar V, Tron T. Probing the Surface of a Laccase for Clues towards the Design of Chemo-Enzymatic Catalysts. Chempluschem 2017; 82:607-614. [DOI: 10.1002/cplu.201700030] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2017] [Revised: 02/02/2017] [Indexed: 11/11/2022]
Affiliation(s)
- Viviane Robert
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | - Emanuele Monza
- Joint BSC-CRG-IRB Research Program in Computational Biology; Barcelona Supercomputing Centre; Jordi Girona 29 08034 Barcelona Spain
| | - Lionel Tarrago
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | - Ferran Sancho
- Joint BSC-CRG-IRB Research Program in Computational Biology; Barcelona Supercomputing Centre; Jordi Girona 29 08034 Barcelona Spain
| | - Anna De Falco
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | - Ludovic Schneider
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | | | - Yasmina Mekmouche
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | | | - A. Jalila Simaan
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
| | - Victor Guallar
- Joint BSC-CRG-IRB Research Program in Computational Biology; Barcelona Supercomputing Centre; Jordi Girona 29 08034 Barcelona Spain
- ICREA; Passeig Lluís Companys 23 08010 Barcelona Spain
| | - Thierry Tron
- Aix Marseille Université; Centrale Marseille, CNRS, iSm2 UMR 7313; 13397 Marseille France
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11
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de Morais Júnior WG, Terrasan CRF, Fernández-Lorente G, Guisán JM, Ribeiro EJ, de Resende MM, Pessela BC. Solid-phase amination of Geotrichum candidum lipase: ionic immobilization, stabilization and fish oil hydrolysis for the production of Omega-3 polyunsaturated fatty acids. Eur Food Res Technol 2017. [DOI: 10.1007/s00217-017-2848-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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12
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Virgen-Ortíz JJ, dos Santos JCS, Berenguer-Murcia Á, Barbosa O, Rodrigues RC, Fernandez-Lafuente R. Polyethylenimine: a very useful ionic polymer in the design of immobilized enzyme biocatalysts. J Mater Chem B 2017; 5:7461-7490. [DOI: 10.1039/c7tb01639e] [Citation(s) in RCA: 172] [Impact Index Per Article: 24.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
This review discusses the possible roles of polyethylenimine (PEI) in the design of improved immobilized biocatalysts from diverse perspectives.
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Affiliation(s)
- Jose J. Virgen-Ortíz
- CONACYT-Centro de Investigación en Alimentación y Desarrollo
- A.C. (CIAD)-Consorcio CIDAM
- 58341 Morelia
- Mexico
| | - José C. S. dos Santos
- Instituto de Engenharias e Desenvolvimento Sustentável
- Universidade da Integração Internacional da Lusofonia Afro-Brasileira
- Acarape
- Brazil
| | - Ángel Berenguer-Murcia
- Instituto Universitario de Materiales
- Departamento de Química Inorgánica
- Universidad de Alicante
- Campus de San Vicente del Raspeig
- Ap. 99-03080 Alicante
| | - Oveimar Barbosa
- Departamento de Química
- Facultad de Ciencias
- Universidad del Tolima
- Ibagué
- Colombia
| | - Rafael C. Rodrigues
- Biocatalysis and Enzyme Technology Lab
- Institute of Food Science and Technology
- Federal University of Rio Grande do Sul
- Av. Bento Gonçalves
- Porto Alegre
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13
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Protein consensus-based surface engineering (ProCoS): a computer-assisted method for directed protein evolution. Biotechniques 2016; 61:305-314. [PMID: 27938322 DOI: 10.2144/000114483] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2016] [Accepted: 09/23/2016] [Indexed: 11/23/2022] Open
Abstract
Protein consensus-based surface engineering (ProCoS) is a simple and efficient method for directed protein evolution combining computational analysis and molecular biology tools to engineer protein surfaces. ProCoS is based on the hypothesis that conserved residues originated from a common ancestor and that these residues are crucial for the function of a protein, whereas highly variable regions (situated on the surface of a protein) can be targeted for surface engineering to maximize performance. ProCoS comprises four main steps: (i) identification of conserved and highly variable regions; (ii) protein sequence design by substituting residues in the highly variable regions, and gene synthesis; (iii) in vitro DNA recombination of synthetic genes; and (iv) screening for active variants. ProCoS is a simple method for surface mutagenesis in which multiple sequence alignment is used for selection of surface residues based on a structural model. To demonstrate the technique's utility for directed evolution, the surface of a phytase enzyme from Yersinia mollaretii (Ymphytase) was subjected to ProCoS. Screening just 1050 clones from ProCoS engineering-guided mutant libraries yielded an enzyme with 34 amino acid substitutions. The surface-engineered Ymphytase exhibited 3.8-fold higher pH stability (at pH 2.8 for 3 h) and retained 40% of the enzyme's specific activity (400 U/mg) compared with the wild-type Ymphytase. The pH stability might be attributed to a significantly increased (20 percentage points; from 9% to 29%) number of negatively charged amino acids on the surface of the engineered phytase.
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14
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Virgen-Ortíz JJ, Peirce S, Tacias-Pascacio VG, Cortes-Corberan V, Marzocchella A, Russo ME, Fernandez-Lafuente R. Reuse of anion exchangers as supports for enzyme immobilization: Reinforcement of the enzyme-support multiinteraction after enzyme inactivation. Process Biochem 2016. [DOI: 10.1016/j.procbio.2016.06.020] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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15
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Jia H, Gao Z, Ma Y, Zhong C, Wang C, Zhou H, Wei P. Preparation and characterization of a highly stable phenoxazinone synthase nanogel. Chem Cent J 2016; 10:34. [PMID: 27239225 PMCID: PMC4884384 DOI: 10.1186/s13065-016-0178-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2015] [Accepted: 05/10/2016] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Phenoxazinone synthase (PHS) is a laccase-like multicopper oxidase originating from Streptomyces with great industrial application potential. In this paper, we prepared the PHS nanogel retaining 82 % of its initial activity by aqueous in situ polymerization at pH 9.3. RESULTS The average diameter of the PHS nanogel was 50.8 nm based on dynamic light scattering (DLS) analysis. Fluorescence analysis indicated the impressive preservation of the enzyme molecular structure upon modification. The PHS nanogel exhibited the most activity at pH 4.0-4.5 and 50 °C while the corresponding values were pH 4.5 and 40 °C for the native PHS. The K m and V max of the PHS nanogel were found to be 0.052 mM and 0.018 mM/min, whereas those of the native PHS were 0.077 mM and 0.021 mM/min, respectively. In addition, the PHS nanogel possessed higher thermal and storage stability and solvent tolerance compared with the native one. The half-life of the PHS nanogel was 1.71 h and multiplied around ninefold compared to 0.19 h for the native one. CONCLUSION In summary, the PHS nanogel could be a promising biocatalyst in industry.
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Affiliation(s)
- Honghua Jia
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Zhen Gao
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Yingying Ma
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Chao Zhong
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Chunming Wang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Hua Zhou
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
| | - Ping Wei
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800 China
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16
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Rueda N, dos Santos JCS, Ortiz C, Torres R, Barbosa O, Rodrigues RC, Berenguer-Murcia Á, Fernandez-Lafuente R. Chemical Modification in the Design of Immobilized Enzyme Biocatalysts: Drawbacks and Opportunities. CHEM REC 2016; 16:1436-55. [DOI: 10.1002/tcr.201600007] [Citation(s) in RCA: 138] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Nazzoly Rueda
- Departamento de Biocatálisis; ICP-CSIC C/Marie Curie 2, Campus UAM-CSIC; Cantoblanco 28049 Madrid Spain
- Escuela de Química, Grupo de investigación en Bioquímica y Microbiología (GIBIM) Edificio Camilo Torres 210, Universidad Industrial de Santander; CEP 680001 Bucaramanga Colombia
| | - Jose C. S. dos Santos
- Departamento de Biocatálisis; ICP-CSIC C/Marie Curie 2, Campus UAM-CSIC; Cantoblanco 28049 Madrid Spain
- Instituto de Engenharias e Desenvolvimento Sustentável Universidade da Integração Internacional da Lusofonia Afro-Brasileira; CEP 62785-000 Acarape CE Brazil
| | - Claudia Ortiz
- Escuela de Microbiología, Universidad Industrial de Santander; Bucaramanga Colombia
| | - Rodrigo Torres
- Escuela de Química, Grupo de investigación en Bioquímica y Microbiología (GIBIM) Edificio Camilo Torres 210, Universidad Industrial de Santander; CEP 680001 Bucaramanga Colombia
| | - Oveimar Barbosa
- Departamento de Química; Facultad de Ciencias Universidad del Tolima; Ibagué Colombia
| | - Rafael C. Rodrigues
- Biocatalysis and Enzyme Technology Laboratory; Institute of Food Science and Technology Federal University of Rio Grande do Sul; Av. Bento Gonçalves 9500 P.O. Box 15090 Porto Alegre RS Brazil
| | - Ángel Berenguer-Murcia
- Instituto Universitario de Materiales Departamento de Química Inorgánica Universidad de Alicante Campus de San Vicente del Raspeig; Ap. 99 - 03080 Alicante Spain
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Kim KM, Kim HM, Lee WJ, Lee CW, Kim TI, Lee JK, Jeong J, Paek SM, Oh JM. Surface treatment of silica nanoparticles for stable and charge-controlled colloidal silica. Int J Nanomedicine 2014; 9 Suppl 2:29-40. [PMID: 25565824 PMCID: PMC4279762 DOI: 10.2147/ijn.s57922] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
An attempt was made to control the surface charge of colloidal silica nanoparticles with 20 nm and 100 nm diameters. Untreated silica nanoparticles were determined to be highly negatively charged and have stable hydrodynamic sizes in a wide pH range. To change the surface to a positively charged form, various coating agents, such as amine containing molecules, multivalent metal cation, or amino acids, were used to treat the colloidal silica nanoparticles. Molecules with chelating amine sites were determined to have high affinity with the silica surface to make agglomerations or gel-like networks. Amino acid coatings resulted in relatively stable silica colloids with a modified surface charge. Three amino acid moiety coatings (L-serine, L-histidine, and L-arginine) exhibited surface charge modifying efficacy of L-histidine > L-arginine > L-serine and hydrodynamic size preservation efficacy of L-serine > L-arginine > L-histidine. The time dependent change in L-arginine coated colloidal silica was investigated by measuring the pattern of the backscattered light in a Turbiscan™. The results indicated that both the 20 nm and 100 nm L-arginine coated silica samples were fairly stable in terms of colloidal homogeneity, showing only slight coalescence and sedimentation.
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Affiliation(s)
- Kyoung-Min Kim
- Department of Chemistry and Medical Chemistry, College of Science and Technology, Yonsei University, Gangwon-do, Republic of Korea
| | - Hye Min Kim
- Department of Chemistry and Medical Chemistry, College of Science and Technology, Yonsei University, Gangwon-do, Republic of Korea
| | - Won-Jae Lee
- Department of Chemistry, Kyungpook National University, Taegu, Republic of Korea
| | - Chang-Woo Lee
- Battelle-Korea Laboratory, International Center for Converging Technology, Korea University, Seoul, Republic of Korea
| | - Tae-il Kim
- Department of Biosystems and Biomaterials Science and Engineering, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea
| | - Jong-Kwon Lee
- Toxicological Research Division, National Institute of Food and Drug Safety Evaluation, Chungchungbuk-do, Republic of Korea
| | - Jayoung Jeong
- Toxicological Research Division, National Institute of Food and Drug Safety Evaluation, Chungchungbuk-do, Republic of Korea
| | - Seung-Min Paek
- Department of Chemistry, Kyungpook National University, Taegu, Republic of Korea
| | - Jae-Min Oh
- Department of Chemistry and Medical Chemistry, College of Science and Technology, Yonsei University, Gangwon-do, Republic of Korea
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Rodrigues RC, Barbosa O, Ortiz C, Berenguer-Murcia Á, Torres R, Fernandez-Lafuente R. Amination of enzymes to improve biocatalyst performance: coupling genetic modification and physicochemical tools. RSC Adv 2014. [DOI: 10.1039/c4ra04625k] [Citation(s) in RCA: 102] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Improvement of the features of an enzyme is in many instances a pre-requisite for the industrial implementation of these exceedingly interesting biocatalysts.
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Affiliation(s)
- Rafael C. Rodrigues
- Biocatalysis and Enzyme Technology Lab
- Institute of Food Science and Technology
- Federal University of Rio Grande do Sul
- Porto Alegre, Brazil
| | - Oveimar Barbosa
- Escuela de Química
- Grupo de investigación en Bioquímica y Microbiología (GIBIM)
- Edificio Camilo Torres 210
- Universidad Industrial de Santander
- Bucaramanga, Colombia
| | - Claudia Ortiz
- Escuela de Bacteriología y Laboratorio Clínico
- Universidad Industrial de Santander
- Bucaramanga, Colombia
| | - Ángel Berenguer-Murcia
- Instituto Universitario de Materiales
- Departamento de Química Inorgánica
- Universidad de Alicante
- Ap. 99-03080 Alicante, Spain
| | - Rodrigo Torres
- Escuela de Química
- Grupo de investigación en Bioquímica y Microbiología (GIBIM)
- Edificio Camilo Torres 210
- Universidad Industrial de Santander
- Bucaramanga, Colombia
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19
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Grulich M, Štěpánek V, Kyslík P. Perspectives and industrial potential of PGA selectivity and promiscuity. Biotechnol Adv 2013; 31:1458-72. [DOI: 10.1016/j.biotechadv.2013.07.005] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2012] [Revised: 07/02/2013] [Accepted: 07/06/2013] [Indexed: 11/26/2022]
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20
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21
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Kim K, Bae B, Kang YJ, Nam JM, Kang S, Ryu JH. Natural polypeptide-based supramolecular nanogels for stable noncovalent encapsulation. Biomacromolecules 2013; 14:3515-22. [PMID: 23962280 DOI: 10.1021/bm400846h] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Supramolecular nanogel, a physically cross-linked nanosize hydrogel, spontaneously self-assembles in aqueous solution via secondary interactions and is thus of great interest in nanomedicine as a drug carrier. We developed a versatile method for supramolecular nanogel self-assembled by electrostatic interaction between positive surfactant micelles and negative polypeptides. Core-shell-like structures of supramolecular nanogels provide stable hydrophobic pockets that prevent simple diffusion of hydrophobic guest molecules, resulting in high encapsulation stability. The size of the supramolecular nanogels can be systematically controlled by varying the size of the surfactant micelles. Furthermore, noncovalently encapsulated dye molecules can be released in response to matrix metalloproteinases highly overexpressed in tumor tissues, potentially providing tumor-triggered targeting.
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Affiliation(s)
- Keunsuk Kim
- Department of Chemistry, Seoul National University , Seoul 151-747, Korea
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22
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Talbert JN, Hotchkiss JH. Chemical modification of lactase for immobilization on carboxylic acid-functionalized microspheres. BIOCATAL BIOTRANSFOR 2012. [DOI: 10.3109/10242422.2012.740020] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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23
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Barbosa O, Torres R, Ortiz C, Fernandez-Lafuente R. The slow-down of the CALB immobilization rate permits to control the inter and intra molecular modification produced by glutaraldehyde. Process Biochem 2012. [DOI: 10.1016/j.procbio.2012.02.009] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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24
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Talbert JN, Goddard JM. Enzymes on material surfaces. Colloids Surf B Biointerfaces 2012; 93:8-19. [DOI: 10.1016/j.colsurfb.2012.01.003] [Citation(s) in RCA: 261] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2011] [Revised: 11/23/2011] [Accepted: 01/03/2012] [Indexed: 12/11/2022]
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25
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Wang J, Zhao G, Li Y, Liu X, Hou P. Reversible immobilization of glucoamylase onto magnetic chitosan nanocarriers. Appl Microbiol Biotechnol 2012; 97:681-92. [DOI: 10.1007/s00253-012-3979-2] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2011] [Revised: 02/15/2012] [Accepted: 02/16/2012] [Indexed: 11/24/2022]
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26
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Garcia-Galan C, Berenguer-Murcia Á, Fernandez-Lafuente R, Rodrigues RC. Potential of Different Enzyme Immobilization Strategies to Improve Enzyme Performance. Adv Synth Catal 2011. [DOI: 10.1002/adsc.201100534] [Citation(s) in RCA: 1243] [Impact Index Per Article: 95.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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27
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Rodrigues RC, Berenguer-Murcia Á, Fernandez-Lafuente R. Coupling Chemical Modification and Immobilization to Improve the Catalytic Performance of Enzymes. Adv Synth Catal 2011. [DOI: 10.1002/adsc.201100163] [Citation(s) in RCA: 272] [Impact Index Per Article: 20.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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28
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Enhancing the functional properties of thermophilic enzymes by chemical modification and immobilization. Enzyme Microb Technol 2011; 49:326-46. [PMID: 22112558 DOI: 10.1016/j.enzmictec.2011.06.023] [Citation(s) in RCA: 223] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2011] [Revised: 06/28/2011] [Accepted: 06/29/2011] [Indexed: 12/20/2022]
Abstract
The immobilization of proteins (mostly typically enzymes) onto solid supports is mature technology and has been used successfully to enhance biocatalytic processes in a wide range of industrial applications. However, continued developments in immobilization technology have led to more sophisticated and specialized applications of the process. A combination of targeted chemistries, for both the support and the protein, sometimes in combination with additional chemical and/or genetic engineering, has led to the development of methods for the modification of protein functional properties, for enhancing protein stability and for the recovery of specific proteins from complex mixtures. In particular, the development of effective methods for immobilizing large multi-subunit proteins with multiple covalent linkages (multi-point immobilization) has been effective in stabilizing proteins where subunit dissociation is the initial step in enzyme inactivation. In some instances, multiple benefits are achievable in a single process. Here we comprehensively review the literature pertaining to immobilization and chemical modification of different enzyme classes from thermophiles, with emphasis on the chemistries involved and their implications for modification of the enzyme functional properties. We also highlight the potential for synergies in the combined use of immobilization and other chemical modifications.
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29
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Zhao G, Li Y, Wang J, Zhu H. Reversible immobilization of glucoamylase onto magnetic carbon nanotubes functionalized with dendrimer. Appl Microbiol Biotechnol 2011; 91:591-601. [DOI: 10.1007/s00253-011-3299-y] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2011] [Revised: 03/12/2011] [Accepted: 03/31/2011] [Indexed: 10/18/2022]
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30
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Vujcić Z, Milovanović A, Bozić N, Dojnov B, Vujcić M, Andjelković U, Loncar N. Immobilization of cell wall invertase modified with glutaraldehyde for continuous production of invert sugar. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2010; 58:11896-11900. [PMID: 20977188 DOI: 10.1021/jf101836r] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Yeast cell wall invertase (CWI) was modified with dimethyl suberimidate, glutaraldehyde, formaldehyde, and sodium periodate. Retained activity after modification was 45% for CWI modified with formaldehyde, 77% for CWI modified with sodium periodate, 80% for CWI modified with glutaraldehyde, and 115% for CWI modified with dimethyl suberimidate. Chemically modified and native CWIs showed significantly broad pH stability (pH 3-11), whereas after incubations at 50, 60, and 70 °C, CWI modified with glutaraldehyde showed the highest thermostability. Optimum pH for CWI modified with glutaraldehyde was between 4 and 5, whereas optimum temperature was at 60 °C. Comparison to CWI modified with glutaraldehyde after immobilization within alginate beads showed broader pH optimum (4.0-5.5) as well as broader temperature optimum (55-70 °C). Column bed reactor packed with the immobilized CWI modified with glutaraldehyde was successfully used for the 95% inversion of 60% (w/w) sucrose at the flow rate of 3 bed volumes per hour, pH 4.9, and 45 °C. A 1 month productivity of 3844 kg of inverted sugar/kg of the immobilisate was obtained.
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Affiliation(s)
- Zoran Vujcić
- Department of Biochemistry, Faculty of Chemistry, Institute of Chemistry, University of Belgrade, Belgrade, Serbia.
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31
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Forde J, Vakurov A, Gibson TD, Millner P, Whelehan M, Marison IW, Ó’Fágáin C. Chemical modification and immobilisation of lipase B from Candida antarctica onto mesoporous silicates. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.molcatb.2010.05.010] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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34
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An L, Wang S, Zhu D. Conjugated Polyelectrolytes for Protein Assays and for the Manipulation of the Catalytic Activity of Enzymes. Chem Asian J 2008; 3:1601-6. [DOI: 10.1002/asia.200800096] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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35
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Enzymatic Hydrolysis of Penicillin for 6-APA Production in Three-Liquid-Phase System. Appl Biochem Biotechnol 2007; 144:145-59. [DOI: 10.1007/s12010-007-8018-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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36
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37
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Mateo C, Palomo JM, Fernandez-Lorente G, Guisan JM, Fernandez-Lafuente R. Improvement of enzyme activity, stability and selectivity via immobilization techniques. Enzyme Microb Technol 2007. [DOI: 10.1016/j.enzmictec.2007.01.018] [Citation(s) in RCA: 2543] [Impact Index Per Article: 149.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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