1
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Sang-Aroon W, Alberto ME, Toscano M, Russo N. Chalcogen atom effect on the intersystem crossing kinetic constant of oxygen- and sulfur disubstituted heteroporphyrins. J Comput Chem 2024; 45:1322-1328. [PMID: 38363067 DOI: 10.1002/jcc.27331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 01/30/2024] [Accepted: 02/01/2024] [Indexed: 02/17/2024]
Abstract
The modulation of the photophysical properties of di-substituted porphyrin rings upon the oxygen and sulfur-for-nitrogen replacement has been investigated at density functional theory (DFT) and its time-dependent formulation (TDDFT). The considered properties range from structural behaviors and excitation energies to spin-orbit coupling (SOC) and nonradiative intersystem kinetic constants. Results show that the SOC strongly increase upon chalcogen substitution and, accordingly, the computed nonradiative kinetic constant also indicate an efficient singlet-triplet intersystem crossing in the sulfur containing macrocycle. The presented results indicate an alternative way to properly modulate the porphyrin's crucial properties for their use in photodynamic therapy, without resorting to the use of heavy atoms.
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Affiliation(s)
- Wichien Sang-Aroon
- Department of Chemistry, Faculty of Engineering, Rajamangala University of Technology Isan, Khon Kaen, Thailand
| | - Marta Erminia Alberto
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Rende, Italy
| | - Marirosa Toscano
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Rende, Italy
| | - Nino Russo
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Rende, Italy
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2
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Elayan IA, Rib L, A Mendes R, Brown A. Beyond Explored Functionals: A Computational Journey of Two-Photon Absorption. J Chem Theory Comput 2024; 20:3879-3893. [PMID: 38648613 DOI: 10.1021/acs.jctc.4c00133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2024]
Abstract
We present a thorough investigation into the efficacy of 19 density functional theory (DFT) functionals, relative to RI-CC2 results, for computing two-photon absorption (2PA) cross sections (σ2PA) and key dipole moments (|μ00|, |μ11|, |Δμ|, |μ01|) for a series of coumarin dyes in the gas-phase. The functionals include different categories, including local density approximation (LDA), generalized gradient approximation (GGA), hybrid-GGA (H-GGA), range-separated hybrid-GGA (RSH-GGA), meta-GGA (M-GGA), and hybrid M-GGA (HM-GGA), with 14 of them being subjected to analysis for the first time with respect to predicting σ2PA values. Analysis reveals that functionals integrating both short-range (SR) and long-range (LR) corrections, particularly those within the RSH-GGA and HM-GGA classes, outperform the others. Furthermore, the range-separation approach was found more impactful compared to the varying percentages of Hartree-Fock exchange (HF Ex) within different functionals. The functionals traditionally recommended for 2PA do not appear among the top 9 in our study, which is particularly interesting, as these top-performing functionals have not been previously investigated in this context. This list is dominated by M11, QTP variants, ωB97X, ωB97X-V, and M06-2X, surpassing the performance of other functionals, including the commonly used CAM-B3LYP.
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Affiliation(s)
- Ismael A Elayan
- Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Laura Rib
- Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Rodrigo A Mendes
- Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
- Departamento de Química, Universidade Federal de Mato Grosso, Cuiabá, Mato Grosso 78060-900, Brazil
| | - Alex Brown
- Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
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3
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Jacobi R, González L. Resonance energy transfer in orthogonally arranged chromophores: a question of molecular representation. Phys Chem Chem Phys 2024; 26:12299-12305. [PMID: 38602332 DOI: 10.1039/d4cp00420e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/12/2024]
Abstract
Energy transfer between orthogonally arranged chromophores is typically considered impossible according to conventional Förster resonance energy transfer theory. Nevertheless, the disruption of orthogonality by nuclear vibrations can enable energy transfer, what has prompted the necessity for formal expansions of the standard theory. Here, we propose that there is no need to extend conventional Förster theory in such cases. Instead, a more accurate representation of the chromophores is required. Through calculations of the energy transfer rate using structures from a thermal ensemble, rather than relying on equilibrium geometries, we show that the standard Förster resonance energy transfer theory is still capable of describing energy transfer in orthogonally arranged systems. Our calculations explain how thermal vibrations influence the electronic properties of the states involved in energy transfer, affecting the alignment of transition dipole moments and the intensity of transitions.
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Affiliation(s)
- Richard Jacobi
- Doctoral School in Chemistry (DoSChem), University of Vienna, Währinger Straße 42, 1090 Vienna, Austria
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 17, 1090 Vienna, Austria
| | - Leticia González
- Vienna Research Platform on Accelerating Photoreaction Discovery, University of Vienna, Währinger Straße 17, 1090 Vienna, Austria.
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 17, 1090 Vienna, Austria
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4
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Zhang B, Liu S, Pei J, Luo M, Chen Y, Jia Q, Wu Z, Wang D. Efficient red thermally activated delayed fluorescence emitters achieved through precise control of excited state energy levels. Chem Sci 2024; 15:5746-5756. [PMID: 38638236 PMCID: PMC11023617 DOI: 10.1039/d4sc00535j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 03/08/2024] [Indexed: 04/20/2024] Open
Abstract
The variety of highly efficient red/near-infrared (NIR) materials with thermally activated delayed fluorescence (TADF) feature is extremely limited so far, and it is necessary to expand the candidate pool of excellent red/deep-red emitters. However, how to control the energy level alignment of the 1CT (singlet charge transfer) state and the 3LE (triplet local excitation) state to improve the emission efficiency of materials remains a challenge. Herein, based on our previously reported green fluorescent material 67dTPA-FQ, three new donor-acceptor type TADF materials (TQ-oMeOTPA, TsQ-oMeOTPA and SQ-oMeOTPA) were designed by introducing 4,4'-dimethoxy triphenylamine (MeOTPA) as the donor, and introduced S atoms on the acceptors to enhance the spin-orbit coupling (SOC) and CT effects. The theoretical calculations showed that the newly introduced MeOTPA and S atom successfully enhanced the CT effect of the materials, not only shifting the luminescence peak to the deep red region but also effectively adjusting the energy level alignment of the excited state, accelerating the reverse intersystem crossing process. Finally, the organic light-emitting diodes based on SQ-oMeOTPA exhibit an external quantum efficiency of 19.1%, with an emission peak at 619 nm. This work not only expands the candidate inventory of red TADF materials, but also proves the feasibility of designing emitters by adjusting the excited state energy levels, greatly broadening the diversity of TADF emitters in design, and providing a powerful means for rapidly screening efficient emitters in the future.
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Affiliation(s)
- BoHua Zhang
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - SiQi Liu
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - JiangXue Pei
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - MeiTing Luo
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - Yi Chen
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - QingYu Jia
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - ZhaoXin Wu
- Key Laboratory for Physical Electronics and Devices of the Ministry of Education, Shaanxi Key Lab of Information Photonic Technique, School of Electronic and Information Engineering, Xi'an Jiaotong University Xi'an 710049 P. R. China
| | - DongDong Wang
- School of Chemistry, Xi'an Jiaotong University Xi'an 710049 P. R. China
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5
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Knysh I, Raimbault D, Duchemin I, Blase X, Jacquemin D. Assessing the accuracy of TD-DFT excited-state geometries through optimal tuning with GW energy levels. J Chem Phys 2024; 160:144115. [PMID: 38602292 DOI: 10.1063/5.0203818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 03/25/2024] [Indexed: 04/12/2024] Open
Abstract
We study the accuracy of excited state (ES) geometries using optimally tuned LC-PBE functionals with tuning based on GW quasiparticle energies. We compare the results obtained with the PBE, PBE0, non-tuned, and tuned LC-PBE functionals with available high-level CC reference values as well as experimental data. First, we compare ES geometrical parameters obtained for three different types of systems: molecules composed of a few atoms, 4-(dimethylamino)benzonitrile (DMABN), and conjugated dyes. To this end, we used wave-function results as benchmarks. Next, we evaluate the accuracy of the theoretically simulated spectra as compared to the experimental ones for five large dyes. Our results show that, besides small compact molecules for which tuning LC-PBE does not allow obtaining geometries more accurate than those computed with standard functionals, tuned range-separated functionals are clearly to be favored, not only for ES geometries but also for 0-0 energies, band shapes, and intensities for absorption and emission spectra. In particular, the results indicate that GW-tuned LC-PBE functionals provide improved matching with experimental spectra as compared to conventionally tuned functionals. It is an open question whether TD-DFT with GW-tuned functionals can qualitatively mimic the actual many-body Bethe-Salpeter (BSE/GW) formalism for which analytic ionic gradients remain to be developed.
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Affiliation(s)
- Iryna Knysh
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Denez Raimbault
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Ivan Duchemin
- Université Grenoble Alpes, CEA, IRIG-MEM-L_Sim, 38054 Grenoble, France
| | - Xavier Blase
- Université Grenoble Alpes, CNRS, Institut, Néel F-38042, Grenoble
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France, 75005 Paris, France
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6
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Banasiewicz M, Deperasińska I, Gawryś P, Suwińska K, Kozankiewicz B. 2,3-Dichloroanthracene crystal, a new rigid matrix for single molecule optical investigations. Chemphyschem 2024; 25:e202300668. [PMID: 38282140 DOI: 10.1002/cphc.202300668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 01/17/2024] [Accepted: 01/23/2024] [Indexed: 01/30/2024]
Abstract
Absorption and emission spectra of single crystals of 2,3-dichloroathracene (23DCA) and 23DCA dispersed in n-nonane matrix were studied at 5 K. Singlet and triplet excitonic bands in the crystal were estimated to be at about 415 nm and at wavelengths shorter than 700 nm, respectively. Thus, from the spectroscopic point of view, these crystals satisfy all criteria for a transparent and rigid matrix for low temperature optical studies of single molecules of dibenzoterrylene, which have their purely electronic S0→S1 transition at around 785 nm. Quantum-chemistry calculations were used to analyze the spectra.
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Affiliation(s)
- Marzena Banasiewicz
- Institute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, 02-668, Warsaw, Poland
| | - Irena Deperasińska
- Institute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, 02-668, Warsaw, Poland
| | - Paweł Gawryś
- Institute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, 02-668, Warsaw, Poland
| | - Kinga Suwińska
- Cardinal Stefan Wyszyński University in Warsaw, Faculty of Mathematics and Natural Sciences, K. Wóycickiego 1/3, 01-938, Warsaw, Poland
| | - Bolesław Kozankiewicz
- Institute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, 02-668, Warsaw, Poland
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7
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Duque-Prata A, Serpa C, Caridade PJSB. Theoretical Evaluation of Fluorinated Resazurin Derivatives for In Vivo Applications. Molecules 2024; 29:1507. [PMID: 38611787 PMCID: PMC11013821 DOI: 10.3390/molecules29071507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 03/15/2024] [Accepted: 03/25/2024] [Indexed: 04/14/2024] Open
Abstract
Primarily owing to the pronounced fluorescence exhibited by its reduced form, resazurin (also known as alamarBlue®) is widely employed as a redox sensor to assess cell viability in in vitrostudies. In an effort to broaden its applicability for in vivo studies, molecular adjustments are necessary to align optical properties with the near-infrared imaging window while preserving redox properties. This study delves into the theoretical characterisation of a set of fluorinated resazurin derivatives proposed by Kachur et al., 2015 examining the influence of fluorination on structural and electrochemical properties. Assuming that the conductor-like polarisable continuum model mimics the solvent effect, the density functional level of theory combining M06-2X/6-311G* was used to calculate the redox potentials. Furthermore, (TD-)DFT calculations were performed with PBE0/def2-TZVP to evaluate nucleophilic characteristics, transition states for fluorination, relative energies, and fluorescence spectra. With the aim of exploring the potential of resazurin fluorinated derivatives as redox sensors tailored for in vivo applications, acid-base properties and partition coefficients were calculated. The theoretical characterisation has demonstrated its potential for designing novel molecules based on fundamental principles.
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Affiliation(s)
| | | | - Pedro J. S. B. Caridade
- CQC-IMS, Department of Chemistry, University of Coimbra, 304-535 Coimbra, Portugal; (A.D.-P.); (C.S.)
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8
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Tulyabaev AR, Khuzin AA, Lukmanov TI, Sabirov DS. Is this how bromine spiropyran salt is converted to merocyanine under UV irradiation? A look through the prism of quantum chemical calculations. Phys Chem Chem Phys 2024; 26:10336-10342. [PMID: 38501209 DOI: 10.1039/d3cp06322d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
Abstract
The stability of merocyanine forms formed under UV irradiation of a solution of a spiropyran salt, in which an organic part acts as a cation and a compact bromide ion as an anion, their photophysical properties, and the formation mechanism are studied in this work using time-dependent density functional theory. Theoretical calculations show that TTC and CTT are the most stable open forms (the difference in stability energies is 10.5 and 12.0 kcal mol-1 relative to the formation energy of spiropyran, respectively). The simulated absorption bands in the UV spectrum of the merocyanine forms are observed both in the UV region at 308-366 nm and in the visible region at 544-757 nm due to n → π* and π → π* type transitions. We found that the isomerisation mechanism of spiropyran into merocyanine forms includes two key stages: the ring opening to form cisoid merocyanine forms (except unstable TCC) through conical intersection and their subsequent isomerisation to form stable transoid isomers. The length of the Cspiro-O bond is 1.97 Å and the C1'-C2'-C3'-C4' angle is 70° in the structure close to conical intersection. The stage that determines the rate of this process is the isomerisation between transoid forms, as in the case of transformation of open merocyanine forms into spiropyran.
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Affiliation(s)
- Arthur R Tulyabaev
- Institute of Petrochemistry and Catalysis, Ufa Federal Research Centre, Russian Academy of Sciences, 141 Prospekt Oktyabrya, Ufa, Russia.
| | - Artur A Khuzin
- Institute of Petrochemistry and Catalysis, Ufa Federal Research Centre, Russian Academy of Sciences, 141 Prospekt Oktyabrya, Ufa, Russia.
| | - Timur I Lukmanov
- Institute of Petrochemistry and Catalysis, Ufa Federal Research Centre, Russian Academy of Sciences, 141 Prospekt Oktyabrya, Ufa, Russia.
| | - Denis Sh Sabirov
- Institute of Petrochemistry and Catalysis, Ufa Federal Research Centre, Russian Academy of Sciences, 141 Prospekt Oktyabrya, Ufa, Russia.
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9
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Tedy AM, Manna AK. Nature and energetics of low-lying excited singlets/triplets and intersystem crossing rates in selone analogs of perylenediimide: A theoretical perspective. J Chem Phys 2024; 160:114306. [PMID: 38497472 DOI: 10.1063/5.0200211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Accepted: 02/28/2024] [Indexed: 03/19/2024] Open
Abstract
The structural rigidity and chemical diversity of the highly fluorescent perylenediimide (PDI) provide wide opportunities for developing triplet photosensitizers with sufficiently increased energy efficiency. Remarkably high intersystem crossing (ISC) rates with a complete fluorescence turn-off reported recently for several thione analogs of PDI due to substantially large spin-orbit coupling garners huge attention to develop other potential analogs. Here, several selone analogs of PDI, denoted as mSe-PDIs (m = 1-4) with varied Se content and positions, are investigated to provide a comprehensive and comparative picture down the group-16 using density functional theory (DFT) and time-dependent DFT implementing optimally tuned range-separated hybrid in toluene dielectric. All mSe-PDIs are confirmed to be dynamically stable and also thermodynamically feasible to synthesize from their oxygen and thione congeners. The first excited-state singlet (S1) of mSe-PDI with relatively low Se-content (m = 1, 2) is of nπ* character with an expected fluorescence turn-off. Whereas, the ππ* nature of the S1 for 3Se-PDI and 4Se-PDI suggests a possible fluorescence turn-on in the absence of any other active nonradiative deactivation pathways. However, ∼4-6 orders greater ISC rates (∼1012-1014 s-1) than the fluorescence ones (∼108 s-1) for all mSe-PDIs signify highly efficient triplet harvest. Importantly, significantly higher ISC rates for these mSe-PDIs than their thione congeners render them efficient triplet photosensitizers.
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Affiliation(s)
- Annette Mariya Tedy
- Department of Chemistry, Indian Institute of Technology Tirupati, Tirupati, Andhra Pradesh 517619, India
| | - Arun K Manna
- Department of Chemistry, Indian Institute of Technology Tirupati, Tirupati, Andhra Pradesh 517619, India
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10
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Crisci L, Coppola F, Petrone A, Rega N. Tuning ultrafast time-evolution of photo-induced charge-transfer states: A real-time electronic dynamics study in substituted indenotetracene derivatives. J Comput Chem 2024; 45:210-221. [PMID: 37706600 DOI: 10.1002/jcc.27231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 08/31/2023] [Accepted: 09/05/2023] [Indexed: 09/15/2023]
Abstract
Photo-induced charge transfer (CT) states are pivotal in many technological and biological processes. A deeper knowledge of such states is mandatory for modeling the charge migration dynamics. Real-time time-dependent density functional theory (RT-TD-DFT) electronic dynamics simulations are employed to explicitly observe the electronic density time-evolution upon photo-excitation. Asymmetrically substituted indenotetracene molecules, given their potential application as n-type semiconductors in organic photovoltaic materials, are here investigated. Effects of substituents with different electron-donating characters are analyzed in terms of the overall electronic energy spacing and resulting ultrafast CT dynamics through linear response (LR-)TD-DFT and RT-TD-DFT based approaches. The combination of the computational techniques here employed provided direct access to the electronic density reorganization in time and to its spatial and rational representation in terms of molecular orbital occupation time evolution. Such results can be exploited to design peculiar directional charge dynamics, crucial when photoactive materials are used for light-harvesting applications.
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Affiliation(s)
- Luigi Crisci
- Department of Chemical Sciences, University of Napoli Federico II, Complesso Universitario di M.S. Angelo, Naples, Italy
- Scuola Normale Superiore di Pisa, Pisa, Italy
| | | | - Alessio Petrone
- Department of Chemical Sciences, University of Napoli Federico II, Complesso Universitario di M.S. Angelo, Naples, Italy
- Scuola Superiore Meridionale, Naples, Italy
- Istituto Nazionale Di Fisica Nucleare, Sezione di Napoli, Complesso Universitario di M.S. Angelo ed. 6, Naples, Italy
| | - Nadia Rega
- Department of Chemical Sciences, University of Napoli Federico II, Complesso Universitario di M.S. Angelo, Naples, Italy
- Scuola Superiore Meridionale, Naples, Italy
- Istituto Nazionale Di Fisica Nucleare, Sezione di Napoli, Complesso Universitario di M.S. Angelo ed. 6, Naples, Italy
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11
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Keruckiene R, Guzauskas M, Volyniuk D, da Silva Filho DA, Sini G, Grazulevicius JV. Computational and spectral analysis of derivatives of 9,9-dimethyl-9,10-dihydroacridine and 10-Phenyl-10H-phenothiazine-5,5-dioxide with hybridized local and charge-transfer excited states for optoelectronic applications. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 303:123200. [PMID: 37549458 DOI: 10.1016/j.saa.2023.123200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 06/25/2023] [Accepted: 07/21/2023] [Indexed: 08/09/2023]
Abstract
Aiming to combine the advantages of both prompt fluorescence and thermally activated delayed fluorescence in single emitter, molecular design of emitters with hybridized locally excited and charge transfer states were investigated by computational approaches and optical spectroscopy. Taking into account the results of the theoretical screening, the most promising derivatives of 9,9-dimethyl-9,10-dihydroacridine and 10-phenyl-10H-phenothiazine-5,5-dioxide based with the different linking topology (meta- and para-isomers) were selected for the synthesis and experimental investigations. Both the compounds exhibit ultraviolet LE emission peaking at ca. 360 nm, green ICT peaking at ca. 510 nm, and deep-blue HLCT emission peaking at ca. 430 nm when they are molecularly dispersed in the solid media of the different polarity. The developed emitters allow to obtain deep-blue electroluminescence for the host-containing OLEDs and green electroluminescence of host-free devices with the efficiency of exciton production of 42 and 73%, respectively. Efficient exciton production is due to the spin-flip switching via thermally activated processes which is much more efficient than prompt fluorescence. Showing the impact of the linking topology, the para-isomer demonstrated more efficient triplet harvesting in OLEDs than meta-isomer. A detailed discussion on the structure-property relationships and on some discrepancies between the results of the results of theoretical calculations and spectral analysis allows to obtain important insights on the photophysical properties of these compounds.
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Affiliation(s)
- R Keruckiene
- Department of Polymer Chemistry and Technology, Kaunas University of Technology, K. Barsausko St. 59, LT-50254 Kaunas, Lithuania
| | - M Guzauskas
- Department of Polymer Chemistry and Technology, Kaunas University of Technology, K. Barsausko St. 59, LT-50254 Kaunas, Lithuania
| | - D Volyniuk
- Department of Polymer Chemistry and Technology, Kaunas University of Technology, K. Barsausko St. 59, LT-50254 Kaunas, Lithuania
| | - Demetrio A da Silva Filho
- Institute for Advanced Studies, CY Cergy Paris Université, 1 rue Descartes, 95000 Neuville-sur-Oise, France; Institute of Physics, University of Brasilia, 70919-970 Brasilia, Brazil; Laboratoire de Physicochimie des Polymères et des Interfaces, CY Paris Cergy Université, EA 2528, 5 mail Gay-Lussac, Cergy-Pontoise Cedex 95031, France
| | - G Sini
- Laboratoire de Physicochimie des Polymères et des Interfaces, CY Paris Cergy Université, EA 2528, 5 mail Gay-Lussac, Cergy-Pontoise Cedex 95031, France.
| | - J V Grazulevicius
- Department of Polymer Chemistry and Technology, Kaunas University of Technology, K. Barsausko St. 59, LT-50254 Kaunas, Lithuania.
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12
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Tedy AM, Manna AK. Does the Intersystem Crossing Rate of β-Iodinated Phosphorus Corrole Depend on Iodine Numbers and/or Positions? J Phys Chem A 2023; 127:10118-10127. [PMID: 38011309 DOI: 10.1021/acs.jpca.3c05563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
The heavy-atom effect is known to enhance the intersystem crossing (ISC) in organic molecular systems. Effects of iodine numbers and positions on the ISC rate of a few meso-difluorophenyl substituted β-iodinated phosphorus corroles (PCs) with axially ligated fluorine atoms (mI-FPC; m = 1-4) are studied using a time-dependent optimally tuned range-separated hybrid. Solvent effects are accounted for through a polarizable continuum model with a toluene dielectric. Calculations suggest similar thermodynamic stability for all mI-FPCs and also reproduce the experimentally measured 0-0 energies for some of the freebase phosphorus corrole (FPC) systems studied here. Importantly, our results reveal that all mI-FPCs display 10 times larger ISC rate (∼109 s-1) than the fluorescence rate (∼108 s-1), and the higher ISC rate stems from the improved spin-orbit coupling (SOC) introduced by lighter heteroatoms like central P and biaxial F rather than the I heavy-atom effect. However, an enhanced SOC is found with increasing I content for El-Sayed forbidden ISC channels. Research findings reported in this study unveil the impact of light heteroatoms and heavy atoms in promoting ISC in several iodinated PCs, which help in designing visible-light-driven efficient triplet photosensitizers.
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Affiliation(s)
- Annette Mariya Tedy
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, A.P 517619, India
| | - Arun K Manna
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, A.P 517619, India
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13
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Loos PF, Lipparini F, Jacquemin D. Heptazine, Cyclazine, and Related Compounds: Chemically-Accurate Estimates of the Inverted Singlet-Triplet Gap. J Phys Chem Lett 2023:11069-11075. [PMID: 38048474 DOI: 10.1021/acs.jpclett.3c03042] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
Abstract
Molecules that violate Hund's rule and exhibit an inverted gap between the lowest singlet S1 and triplet T1 excited states have attracted considerable attention due to their potential applications in optoelectronics. Among these molecules, the triangular-shaped heptazine, and its derivatives, have been in the limelight. However, conflicting reports have arisen regarding the relative energies of S1 and T1. Here, we employ highly accurate levels of theory, such as CC3, to not only resolve the debate concerning the sign but also quantify the magnitude of the S1-T1 gap. We also determined the 0-0 energies to evaluate the significance of the vertical approximation. In addition, we compute reference S1-T1 gaps for a series of 10 related molecules. This enables us to benchmark lower-order methods for future applications in larger systems within the same family of compounds. This contribution can serve as a foundation for the design of triangular-shaped molecules with enhanced photophysical properties.
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Affiliation(s)
- Pierre-François Loos
- Laboratoire de Chimie et Physique Quantiques, Université de Toulouse, CNRS, UPS, 31400 Toulouse, France
| | - Filippo Lipparini
- Dipartimento di Chimica e Chimica Industriale, University of Pisa, Via Moruzzi 3, 56124 Pisa, Italy
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France, 75005 Paris, France
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14
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Jacquemin D, Kossoski F, Gam F, Boggio-Pasqua M, Loos PF. Reference Vertical Excitation Energies for Transition Metal Compounds. J Chem Theory Comput 2023. [PMID: 37965941 DOI: 10.1021/acs.jctc.3c01080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2023]
Abstract
To enrich and enhance the diversity of the quest database of highly accurate excitation energies [Véril, M.; et al. Wiley Interdiscip. Rev.: Comput. Mol. Sci. 2021, 11, e1517], we report vertical transition energies in transition metal compounds. Eleven diatomic molecules with a singlet or doublet ground state containing a fourth-row transition metal (CuCl, CuF, CuH, ScF, ScH, ScO, ScS, TiN, ZnH, ZnO, and ZnS) are considered, and the corresponding excitation energies are computed using high-level coupled-cluster (CC) methods, namely, CC3, CCSDT, CC4, and CCSDTQ, as well as multiconfigurational methods such as CASPT2 and NEVPT2. In many cases, to provide more comprehensive benchmark data, we also provide full configuration interaction estimates computed with the configuration interaction using a perturbative selection made iteratively (CIPSI) method. Based on these calculations, theoretical best estimates of the transition energies are established in both the aug-cc-pVDZ and aug-cc-pVTZ basis sets. This allows us to accurately assess the performance of the CC and multiconfigurational methods for this specific set of challenging transitions. Furthermore, comparisons with experimental data and previous theoretical results are also reported.
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Affiliation(s)
- Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France (IUF), F-75005 Paris, France
| | - Fábris Kossoski
- Laboratoire de Chimie et Physique Quantiques (UMR 5626), Université de Toulouse, CNRS, UPS, F-31062 Toulouse, France
| | - Franck Gam
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
| | - Martial Boggio-Pasqua
- Laboratoire de Chimie et Physique Quantiques (UMR 5626), Université de Toulouse, CNRS, UPS, F-31062 Toulouse, France
| | - Pierre-François Loos
- Laboratoire de Chimie et Physique Quantiques (UMR 5626), Université de Toulouse, CNRS, UPS, F-31062 Toulouse, France
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15
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Duque-Prata A, Serpa C, Caridade PJSB. Full theoretical protocol for the design of metal-free organic electron donor-spacer-acceptor systems. Phys Chem Chem Phys 2023; 25:27854-27865. [PMID: 37814945 DOI: 10.1039/d3cp03323f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/11/2023]
Abstract
A user-friendly (time-dependent) density functional theory based algorithm is proposed to design new donor-spacer-acceptor systems for electron transfer reactions. This algorithm is focused on metal-free organic compounds, most of which contain aromatic or alkene moieties. The oxidation and reduction potentials are calculated, together with the excited-state energy difference including the zero-point energy and the structural properties required to calculate an electron transfer Gibbs free energy change. The proposed algorithm has been tested on well-known systems, while two new compounds are suggested for photoinduced intramolecular electron transfer reactions using this scheme. The methodology here presented is intended to be a tool for synthetic physical-chemists, allowing them to evaluate the properties of hypothetical systems before the synthesis, enabling the study of limitless combinations of donor-spacer-acceptor arrangements.
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Affiliation(s)
- Amílcar Duque-Prata
- CQC-IMS, Department of Chemistry, University of Coimbra, Rua Larga, 3004-545 Coimbra, Portugal.
| | - Carlos Serpa
- CQC-IMS, Department of Chemistry, University of Coimbra, Rua Larga, 3004-545 Coimbra, Portugal.
| | - Pedro J S B Caridade
- CQC-IMS, Department of Chemistry, University of Coimbra, Rua Larga, 3004-545 Coimbra, Portugal.
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16
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Sandoval JS, McCamant DW. The Best Models of Bodipy's Electronic Excited State: Comparing Predictions from Various DFT Functionals with Measurements from Femtosecond Stimulated Raman Spectroscopy. J Phys Chem A 2023; 127:8238-8251. [PMID: 37751471 PMCID: PMC10561280 DOI: 10.1021/acs.jpca.3c05040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 09/11/2023] [Indexed: 09/28/2023]
Abstract
Density functional theory (DFT) and time-dependent DFT (TD-DFT) are pivotal approaches for modeling electronically excited states of molecules. However, choosing a DFT exchange-correlation functional (XCF) among the myriad of alternatives is an overwhelming task that can affect the interpretation of results and lead to erroneous conclusions. The performance of these XCFs to describe the excited-state properties is often addressed by comparing them with high-level wave function methods or experimentally available vertical excitation energies; however, this is a limited analysis that relies on evaluation of a single point in the excited-state potential energy surface (PES). Different strategies have been proposed but are limited by the difficulty of experimentally accessing the electronic excited-state properties. In this work, we have tested the performance of 12 different XCFs and TD-DFT to describe the excited-state potential energy surface of Bodipy (2,6-diethyl-1,3,5,7-tetramethyl-8-phenyldipyrromethene difluoroborate). We compare those results with resonance Raman spectra collected by using femtosecond stimulated Raman spectroscopy (FSRS). By simultaneously fitting the absorption spectrum, fluorescence spectrum, and all of the resonance Raman excitation profiles within the independent mode displaced harmonic oscillator (IMDHO) formalism, we can describe the PES at the Franck-Condon (FC) region and determine the solvent and intramolecular reorganization energy after relaxation. This allows a direct comparison of the TD-DFT output with experimental observables. Our analysis reveals that using vertical absorption energies might not be a good criterion to determine the best XCF for a given molecular system and that FSRS opens up a new way to benchmark the excited-state performance of XCFs of fluorescent dyes.
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Affiliation(s)
- Juan S. Sandoval
- Department of Chemistry, University
of Rochester, 120 Trustee Road, Rochester, New York 14627, United States
| | - David W. McCamant
- Department of Chemistry, University
of Rochester, 120 Trustee Road, Rochester, New York 14627, United States
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17
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Maciejczyk M, Pyrka M. Tautomeric equilibrium and spectroscopic properties of 8-azaguanine revealed by quantum chemistry methods. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2023; 52:545-557. [PMID: 37507591 PMCID: PMC10618388 DOI: 10.1007/s00249-023-01672-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 07/05/2023] [Accepted: 07/11/2023] [Indexed: 07/30/2023]
Abstract
8-azaguanine is a triazolopyrimidine nucleobase analog possessing potent antibacterial and antitumor activities, and it has been implicated as a lead molecule in cancer and malaria therapy. Its intrinsic fluorescence properties can be utilized for monitoring its interactions with biological polymers like proteins or nucleic acids. In order to better understand these interactions, it is important to know the tautomeric equilibrium of this compound. In this work, the tautomeric equilibrium of all natural neutral and anionic compound forms (except highly improbable imino-enol tautomers) as well as their methyl derivatives and ribosides was revealed by quantum chemistry methods. It was shown that, as expected, tautomers protonated at positions 1 and 9 dominate neutral forms both in gas phase and in aqueous solution. 8-azaguanines methylated at any position of the triazole ring are protonated at position 1. The computed vertical absorption and emission energies are in very good agreement with the experimental data. They confirm the validity of the assumption that replacing the proton with the methyl group does not significantly change the positions of absorption and fluorescence peaks.
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Affiliation(s)
- Maciej Maciejczyk
- Department of Physics and Biophysics, University of Warmia and Mazury in Olsztyn, Oczapowskiego 4, 10-719, Olsztyn, Poland.
| | - Maciej Pyrka
- Department of Physics and Biophysics, University of Warmia and Mazury in Olsztyn, Oczapowskiego 4, 10-719, Olsztyn, Poland
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18
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Russel NS, Kodali G, Stanley RJ, Narayanan M. Screening for Novel Fluorescent Nucleobase Analogues Using Computational and Experimental Methods: 2-Amino-6-chloro-8-vinylpurine (2A6Cl8VP) as a Case Study. J Phys Chem B 2023; 127:7858-7871. [PMID: 37698525 DOI: 10.1021/acs.jpcb.3c03618] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/13/2023]
Abstract
Novel fluorescent nucleic acid base analogues (FBAs) with improved optical properties are needed in a variety of biological applications. 2-Amino-6-chloro-8-vinylpurine (2A6Cl8VP) is structural analogue of two existing highly fluorescent FBAs, 2-aminopurine (2AP) and 8-vinyladenine (8VA), and can therefore be expected to have similar base pairing as well as better optical properties compared to its counterparts. In order to determine the absorption and fluorescence properties of 2A6Cl8VP, as a first step, we used TD-DFT calculations and the polarizable continuum model for simulating the solvents and computationally predicted absorption and fluorescence maxima. To test the computational predictions, we also synthesized 2A6Cl8VP and measured its UV/vis absorbance, fluorescence emission, and fluorescence lifetime. The computationally predicted absorbance and fluorescence maxima of 2A6Cl8VP are in reasonable agreement to the experimental values and are significantly redshifted compared to 2AP and 8VA, allowing for its specific excitation. The fluorescence quantum yield of 2A6Cl8VP, however, is significantly lower than those of 2AP and 8VA. Overall, 2A6Cl8VP is a novel fluorescent nucleobase analogue, which can be useful in studying structural, biophysical, and biochemical applications.
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Affiliation(s)
- Nadim Shahriar Russel
- Department of Chemistry, Temple University, 1901 N. Broad Street, Philadelphia, Pennsylvania 19122, United States
| | - Goutham Kodali
- GlowDNA LLC., Malvern, Pennsylvania 19355, United States
| | - Robert J Stanley
- Department of Chemistry, Temple University, 1901 N. Broad Street, Philadelphia, Pennsylvania 19122, United States
| | - Madhavan Narayanan
- Department of Physical Sciences, Benedictine University, 5700 College Rd, Lisle, Illinois 60532, United States
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19
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Bousquet MHE, Papineau TV, Veys K, Escudero D, Jacquemin D. Extensive Analysis of the Parameters Influencing Radiative Rates Obtained through Vibronic Calculations. J Chem Theory Comput 2023; 19:5525-5547. [PMID: 37494031 DOI: 10.1021/acs.jctc.3c00191] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2023]
Abstract
Defining a theoretical model systematically delivering accurate ab initio predictions of the fluorescence quantum yields of organic dyes is highly desirable for designing improved fluorophores in a systematic rather than trial-and-error way. To this end, the first required step is to obtain reliable radiative rates (kr), as low kr typically precludes effective emission. In the present contribution, using a series of 10 substituted phenyls with known experimental kr, we analyze the impact of the computational protocol on the kr determined through the thermal vibration correlation function (TVCF) approach on the basis of time-dependent density functional theory (TD-DFT) calculations of the energies, structures, and vibrational parameters. Both the electronic structure (selected exchange-correlation functional, application or not of the Tamm-Dancoff approximation) and the vibronic parameters (line-shape formalism, coordinate system, potential energy surface model, and dipole expansion) are tackled. Considering all possible combinations yields more than 3500 cases, allowing to extract statistically-relevant information regarding the impact of each computational parameter on the magnitude of the estimated kr. It turns out that the selected vibronic model can have a significant impact on the computed kr, especially the potential energy surface model. This effect is of the same order of magnitude as the difference noted between B3LYP and CAM-B3LYP estimates. For the treated compounds, all evaluated functionals do deliver reasonable trends, fitting the experimental values.
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Affiliation(s)
| | | | - Koen Veys
- Department of Chemistry, KU Leuven, B-3001 Leuven, Belgium
| | | | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France (IUF), F-75005 Paris, France
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20
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Avramopoulos A, Reis H, Tzeli D, Zaleśny R, Papadopoulos MG. Photoswitchable Molecular Units with Tunable Nonlinear Optical Activity: A Theoretical Investigation. Molecules 2023; 28:5646. [PMID: 37570617 PMCID: PMC10419997 DOI: 10.3390/molecules28155646] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 07/20/2023] [Accepted: 07/20/2023] [Indexed: 08/13/2023] Open
Abstract
The first-, second-, and third-order molecular nonlinear optical properties, including two-photon absorption of a series of derivatives, involving two dithienylethene (DTE) groups connected by several molecular linkers (bis(ethylene-1,2-dithiolato)Ni- (NiBDT), naphthalene, quasilinear oligothiophene chains), are investigated by employing density functional theory (DFT). These properties can be efficiently controlled by DTE switches, in connection with light of appropriate frequency. NiBDT, as a linker, is associated with a greater contrast, in comparison to naphthalene, between the first and second hyperpolarizabilities of the "open-open" and the "closed-closed" isomers. This is explained by invoking the low-lying excited states of NiBDT. It is shown that the second hyperpolarizability can be used as an index, which follows the structural changes induced by photochromism. Assuming a Förster type transfer mechanism, the intramolecular excited-state energy transfer (EET) mechanism is studied. Two important parameters related to this are computed: the electronic coupling (VDA) between the donor and acceptor fragments as well as the overlap between the absorption and emission spectra of the donor and acceptor groups. NiBDT as a linker is associated with a low electronic coupling, VDA, value. We found that VDA is affected by molecular geometry. Our results predict that the linker strongly influences the communication between the open-closed DTE groups. The sensitivity of the molecular nonlinear optical properties could assist with identification of molecular isomers.
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Affiliation(s)
| | - Heribert Reis
- Institute of Chemical Biology, National Hellenic Research Foundation, 11635 Athens, Greece; (H.R.); (M.G.P.)
| | - Demeter Tzeli
- Laboratory of Physical Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, 15784 Athens, Greece;
- Theoretical and Physical Chemistry Institute, National Hellenic Research Foundation, 11635 Athens, Greece
| | - Robert Zaleśny
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland;
| | - Manthos G. Papadopoulos
- Institute of Chemical Biology, National Hellenic Research Foundation, 11635 Athens, Greece; (H.R.); (M.G.P.)
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21
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D'Annibale V, Chen CG, Bonomo M, Dini D, D'Abramo M. P1 Push‐Pull Dye as a Case Study in QM/MM Theoretical Characterization for Dye‐sensitized Solar Cell Organic Chromophores**. ChemistrySelect 2023. [DOI: 10.1002/slct.202204904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2023]
Affiliation(s)
- Valeria D'Annibale
- Department of Chemistry Sapienza University of Rome 00185 Rome Italy
- Department of Basic and Applied Sciences for Engineering Sapienza University of Rome 00185 Rome Italy
| | | | - Matteo Bonomo
- Department of Chemistry Sapienza University of Rome 00185 Rome Italy
- Department of Chemistry and NIS Interdepartmental Center University of Turin Turin Italy
| | - Danilo Dini
- Department of Chemistry Sapienza University of Rome 00185 Rome Italy
| | - Marco D'Abramo
- Department of Chemistry Sapienza University of Rome 00185 Rome Italy
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22
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Petrusevich EF, Bousquet MHE, Ośmiałowski B, Jacquemin D, Luis JM, Zaleśny R. Cost-Effective Simulations of Vibrationally-Resolved Absorption Spectra of Fluorophores with Machine-Learning-Based Inhomogeneous Broadening. J Chem Theory Comput 2023; 19:2304-2315. [PMID: 37096370 PMCID: PMC10134414 DOI: 10.1021/acs.jctc.2c01285] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/08/2023]
Abstract
The results of electronic and vibrational structure simulations are an invaluable support for interpreting experimental absorption/emission spectra, which stimulates the development of reliable and cost-effective computational protocols. In this work, we contribute to these efforts and propose an efficient first-principle protocol for simulating vibrationally-resolved absorption spectra, including nonempirical estimations of the inhomogeneous broadening. To this end, we analyze three key aspects: (i) a metric-based selection of density functional approximation (DFA) so to benefit from the computational efficiency of time-dependent density function theory (TD-DFT) while safeguarding the accuracy of the vibrationally-resolved spectra, (ii) an assessment of two vibrational structure schemes (vertical gradient and adiabatic Hessian) to compute the Franck-Condon factors, and (iii) the use of machine learning to speed up nonempirical estimations of the inhomogeneous broadening. In more detail, we predict the absorption band shapes for a set of 20 medium-sized fluorescent dyes, focusing on the bright ππ★ S0 → S1 transition and using experimental results as references. We demonstrate that, for the studied 20-dye set which includes structures with large structural variability, the preselection of DFAs based on an easily accessible metric ensures accurate band shapes with respect to the reference approach and that range-separated functionals show the best performance when combined with the vertical gradient model. As far as band widths are concerned, we propose a new machine-learning-based approach for determining the inhomogeneous broadening induced by the solvent microenvironment. This approach is shown to be very robust offering inhomogeneous broadenings with errors as small as 2 cm-1 with respect to genuine electronic-structure calculations, with a total CPU time reduced by 98%.
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Affiliation(s)
- Elizaveta F. Petrusevich
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona, Campus de Montilivi, 17003 Girona, Catalonia, Spain
| | | | - Borys Ośmiałowski
- Faculty of Chemistry, Nicolaus Copernicus University, Gagarina Street 7, PL-87-100 Toruń, Poland
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, F-44000 Nantes, France
- Institut Universitaire de France (IUF), F-75005 Paris, France
| | - Josep M. Luis
- Institute of Computational Chemistry and Catalysis and Department of Chemistry, University of Girona, Campus de Montilivi, 17003 Girona, Catalonia, Spain
| | - Robert Zaleśny
- Faculty of Chemistry, Wrocław University of Science and Technology, Wyb. Wyspiańskiego 27, PL-50370 Wrocław, Poland
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23
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Zhang Y, Fan M, Xu Z, Jiang Y, Ding H, Li Z, Shu K, Zhao M, Feng G, Yong KT, Dong B, Zhu W, Xu G. Machine-learning screening of luminogens with aggregation-induced emission characteristics for fluorescence imaging. J Nanobiotechnology 2023; 21:107. [PMID: 36964565 PMCID: PMC10039567 DOI: 10.1186/s12951-023-01864-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Accepted: 03/18/2023] [Indexed: 03/26/2023] Open
Abstract
Due to the excellent biocompatible physicochemical performance, luminogens with aggregation-induced emission (AIEgens) characteristics have played a significant role in biomedical fluorescence imaging recently. However, screening AIEgens for special applications takes a lot of time and efforts by using conventional chemical synthesis route. Fortunately, artificial intelligence techniques that could predict the properties of AIEgen molecules would be helpful and valuable for novel AIEgens design and synthesis. In this work, we applied machine learning (ML) techniques to screen AIEgens with expected excitation and emission wavelength for biomedical deep fluorescence imaging. First, a database of various AIEgens collected from the literature was established. Then, by extracting key features using molecular descriptors and training various state-of-the-art ML models, a multi-modal molecular descriptors strategy has been proposed to extract the structure-property relationships of AIEgens and predict molecular absorption and emission wavelength peaks. Compared to the first principles calculations, the proposed strategy provided greater accuracy at a lower computational cost. Finally, three newly predicted AIEgens with desired absorption and emission wavelength peaks were synthesized successfully and applied for cellular fluorescence imaging and deep penetration imaging. All the results were consistent successfully with our expectations, which demonstrated the above ML has a great potential for screening AIEgens with suitable wavelengths, which could boost the design and development of novel organic fluorescent materials.
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Affiliation(s)
- Yibin Zhang
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Miaozhuang Fan
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Zhourui Xu
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Yihang Jiang
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Huijun Ding
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Zhengzheng Li
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Kaixin Shu
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Mingyan Zhao
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Gang Feng
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Ken-Tye Yong
- School of Biomedical Engineering, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Biqin Dong
- Guangdong Provincial Key Laboratory of Durability for Marine Civil Engineering, College of Civil and Transportation Engineering, Shenzhen University, Shenzhen, 518060, China
| | - Wei Zhu
- Key Laboratory of Advanced Textile Materials and Manufacturing Technology and Engineering Research Center for Eco-Dyeing & Finishing of Textiles, Ministry of Education, Zhejiang Provincial Engineering Research Center for Green and Low-carbon Dyeing & Finishing, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
| | - Gaixia Xu
- Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen, Guangdong, 518055, China.
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24
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Ahmed R, Manna AK. Electronic Structures and Charge Mobilities of Several Regioisomeric B 2N 2-Substituted Perylenediimides. J Phys Chem A 2023; 127:2742-2750. [PMID: 36921232 DOI: 10.1021/acs.jpca.2c09106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Abstract
Tunable and rich electronic properties of perylenediimide (PDI), an n-type semiconductor together with its synthetic ease and processibility, make it suitable for various optoelectronic and field-effect transistor applications. The electronic structures, spectroscopic properties, and charge mobilities for a few isoelectronic BN-substituted PDIs (B2N2-PDIs) with varied BN-patterning are studied using density functional theory (DFT) and time-dependent DFT employing optimally tuned range-separated hybrid. Two substitutional doping patterns, namely, BNNB and NBBN with zero dipole and also BNBN, the one with a finite dipole, are considered to explore the changes in the PDI properties due to different B2N2-substitutions. All three B2N2-PDIs are found to be dynamically stable and lie within a small energy window of ca. ∼1.7 kcal mol-1. An increased electronic gap due to charge localization produces a similar but slightly blue-shifted low-lying optical peak compared to the pristine PDI, in good agreement with the experimental observations. Additionally, differently considered BN patterns result in only slightly varied charge mobilities due to mainly differences in electronic couplings with larger electron mobilities found for the experimentally synthesized BNNB-PDI crystal. On the other hand, small reorganization energy and relatively large coupling for the hole transport produce greater hole mobilities for the NBBN-PDI. Varied nuclear reorganization and electronic coupling are understood by analyzing Huang-Rhys factors associated with normal modes and frontier molecular orbitals, respectively. These results serve as complementary to understanding the recently reported experimental findings and also provide new insights into the impact of different BN patterns on modulating the PDI electronic and charge-transport properties.
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Affiliation(s)
- Raka Ahmed
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, Andhra Pradesh 517619, India
| | - Arun K Manna
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, Andhra Pradesh 517619, India
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25
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Trifoi LA, Dogantzis NP, Hodgson GK, Ortiz PD, Soha SA, Antonescu CN, Botelho RJ, Wylie RS, Impellizzeri S. Single-colour, visible light activation and excitation of the luminescence of a ‘switch-on’ dye and enhancement by silver nanoparticles. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2022.114369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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26
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You K, Kwon O, Kim D. Effects of the protonation and the polar solvation on the molecular properties of methyl orange: A density functional theory study. B KOREAN CHEM SOC 2023. [DOI: 10.1002/bkcs.12682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Affiliation(s)
- Kanghyeon You
- Department of Chemistry Kyonggi University Yeongtong‐gu, Suwon Korea
| | - O‐Pil Kwon
- Department of Molecular Science and Technology Ajou University Yeongtong‐gu, Suwon Korea
| | - Dongwook Kim
- Department of Chemistry Kyonggi University Yeongtong‐gu, Suwon Korea
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27
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Bhat HR, Dar AA. Revisiting the BODIPY-Borane Dyad for the Design of Efficient Aqueous Phase Molecular Probes for Anion Recognition: A DFT/TD-DFT Study. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2023.114603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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28
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Wright N, Huff JS, Barclay MS, Wilson CK, Barcenas G, Duncan KM, Ketteridge M, Obukhova OM, Krivoshey AI, Tatarets AL, Terpetschnig EA, Dean JC, Knowlton WB, Yurke B, Li L, Mass OA, Davis PH, Lee J, Turner DB, Pensack RD. Intramolecular Charge Transfer and Ultrafast Nonradiative Decay in DNA-Tethered Asymmetric Nitro- and Dimethylamino-Substituted Squaraines. J Phys Chem A 2023; 127:1141-1157. [PMID: 36705555 PMCID: PMC9923757 DOI: 10.1021/acs.jpca.2c06442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Molecular (dye) aggregates are a materials platform of interest in light harvesting, organic optoelectronics, and nanoscale computing, including quantum information science (QIS). Strong excitonic interactions between dyes are key to their use in QIS; critically, properties of the individual dyes govern the extent of these interactions. In this work, the electronic structure and excited-state dynamics of a series of indolenine-based squaraine dyes incorporating dimethylamino (electron donating) and/or nitro (electron withdrawing) substituents, so-called asymmetric dyes, were characterized. The dyes were covalently tethered to DNA Holliday junctions to suppress aggregation and permit characterization of their monomer photophysics. A combination of density functional theory and steady-state absorption spectroscopy shows that the difference static dipole moment (Δd) successively increases with the addition of these substituents while simultaneously maintaining a large transition dipole moment (μ). Steady-state fluorescence and time-resolved absorption and fluorescence spectroscopies uncover a significant nonradiative decay pathway in the asymmetrically substituted dyes that drastically reduces their excited-state lifetime (τ). This work indicates that Δd can indeed be increased by functionalizing dyes with electron donating and withdrawing substituents and that, in certain classes of dyes such as these asymmetric squaraines, strategies may be needed to ensure long τ, e.g., by rigidifying the π-conjugated network.
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Affiliation(s)
- Nicholas
D. Wright
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Jonathan S. Huff
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Matthew S. Barclay
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Christopher K. Wilson
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - German Barcenas
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Katelyn M. Duncan
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Maia Ketteridge
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Olena M. Obukhova
- SSI
“Institute for Single Crystals” of the National Academy
of Sciences of Ukraine, Kharkiv 61072, Ukraine
| | - Alexander I. Krivoshey
- SSI
“Institute for Single Crystals” of the National Academy
of Sciences of Ukraine, Kharkiv 61072, Ukraine
| | - Anatoliy L. Tatarets
- SSI
“Institute for Single Crystals” of the National Academy
of Sciences of Ukraine, Kharkiv 61072, Ukraine
| | | | - Jacob C. Dean
- Department
of Physical Science, Southern Utah University, Cedar City, Utah 84720, United States
| | - William B. Knowlton
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Bernard Yurke
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Lan Li
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States,Center
for
Advanced Energy Studies, Idaho
Falls, Idaho 83401, United States
| | - Olga A. Mass
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Paul H. Davis
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States,Center
for
Advanced Energy Studies, Idaho
Falls, Idaho 83401, United States
| | - Jeunghoon Lee
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Daniel B. Turner
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States
| | - Ryan D. Pensack
- †Micron
School of Materials Science & Engineering, ⊥Department of Electrical
& Computer Engineering, ○Department of Chemistry & Biochemistry, Boise State University, Boise, Idaho 83725, United States,
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29
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Provasi PF, Modesto-Costa L, Sampaio F, Silva T, da Cunha AR, Andrade-Filho T, Gester R. The Importance of the Density Functional Theory Exchange-Correlation Hartree-Fock Term in Magnetic Resonance: Application to an Aqueous Environment. J Phys Chem A 2023; 127:619-626. [PMID: 36648308 DOI: 10.1021/acs.jpca.2c05623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Within the framework of Density Functional Theory (DFT), the relevance of the term Hartree-Fock exchange (HFE) for a variety of molecular properties is a critical point. For this reason, we spend efforts to understand these relationships in nuclear magnetic resonance (NMR) parameters in a water solvent. This work takes advantage of the appropriate aug-cc-pVTZ-J basis set and the Minnesota family of DFT methods, which consider different portions of HFE contributions. With regard to solvent participation, the results are based on a sequential Monte Carlo/Quantum Mechanics procedure, which builds the structures of the liquid under realistic thermodynamic conditions. Compared to the accurate results of second-order polarization propagator approximation (SOPPA) and experimental data, all NMR parameters show a huge dependence on the size of the HFE contribution. For instance, the inclusion of this term in 1JOH and 2JHH indirect spin-spin couplings does vary with 49.661 and 25.459 Hz, respectively. The M06-HF method accounts for 100% of HFE and better matches the σO and σH shielding constants. On the other hand, 1JOH and 2JHH demand a medium contribution (54% of HFE), the best description being associated with the M06-2X method. Thus, the dependence varies regarding the phenomenology of the property in focus and the order for independent treatments. For elements that participate in hydrogen bonds simultaneously as donor and acceptor actors, the results indicate that explicit solvent molecules must be considered in the quantum mechanical calculations for better modeling of paramagnetic shielding constants.
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Affiliation(s)
- Patricio F Provasi
- Department of Physics, IMIT, Northeastern University, CONICET, AV. Libertad 5500, W 3404 AAS Corrientes, Argentina
| | - Lucas Modesto-Costa
- Departamento de Física, Universidade Federal Rural do Rio de Janeiro, Seropédica, RJ 23890-000, Brazil.,Departamento de Química, Instituto Militar de Engenharia (IME), Rio de Janeiro, RJ 22290-270, Brazil.,Programa de Pós-Graduação em Química, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA68507-590, Brazil
| | - Felipe Sampaio
- Programa de Pós-Graduação em Química, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA68507-590, Brazil
| | - Tércio Silva
- Ciências Naturais, Universidade do Estado do Pará, Belém, PA 66095-015, Brazil
| | - Antônio R da Cunha
- Universidade Federal do Maranhão, UFMA, Campus Balsas, Maranhão CEP 65800-000, Brazil.,Instituto de Física, Universidade de São Paulo, Rua do Matão 1371 Cidade Universitária, São Paulo, São Paulo CEP 05508-090, Brazil
| | - Tarciso Andrade-Filho
- Faculdade de Física, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA 68507-590, Brazil
| | - Rodrigo Gester
- Faculdade de Física, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA 68507-590, Brazil
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30
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Helal W. Double Hybrid Density Functionals for the Electronic Excitation Energies of Linear Cyanines. J Phys Chem A 2023; 127:131-141. [PMID: 36537875 DOI: 10.1021/acs.jpca.2c07192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The lowest bright electronic excitations of seven model linear cyanines (CN3-CN15) using 28 double-hybrid (DH) density functionals are benchmarked against accurate and recent CC3 results. Some of these DH functionals are recently designed specifically for excited electronic state calculations. In addition, CIS, CIS(D), SCS-CIS(D), and SOS-CIS(D) were also tested. Four different basis sets were used for the vertical electronic excitation calculations: cc-pVDZ, aug-cc-pVDZ, cc-pVTZ, and aug-cc-pVTZ basis. Augmented basis sets (e.g. aug-cc-pVDZ and aug-cc-pVTZ) are found to be required for accurate and consistent results using DH functionals. The DH functionals tested in this work are classified into four main groups: global double-hybrids (GDH), range-separated double-hybrids (RSDH), spin-component and spin-opposite scaling global double-hybrids (SCS/SOS-GDH), and spin-component and spin-opposite scaling range-separated double-hybrids (SCS/SOS-RSDH). Within these groups, the SCS/SOS-RSDH group of functionals is found to provide the lowest mean absolute error (MAE) values (in the range 0.020-0.148 eV) in comparison with the GDH group (0.195-0.441 eV), the RSDH group (0.186-0.511 eV), and the SCS/SOS-GDH group (0.079-0.461 eV). Of all the DH functionals and ab initio methods investigated in the present contribution, the following functionals are found to be the most accurate and consistent: SCS-ωB2GPPLYP (MAE = 0.036 eV), SOS-ωB2GPPLYP (MAE = 0.020 eV), SOS-ωB88PP86 (MAE = 0.035 eV), and SOS-ωPBEPP86 (MAE = 0.037 eV). In general, the ab initio methods tested here show mediocre performance as compared to many DH functionals.
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Affiliation(s)
- Wissam Helal
- Department of Chemistry, The University of Jordan, Amman11942, Jordan
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31
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Pecorari D, Giuliani E, Mazzanti A, Stagni S, Fiorini V, Vigarani G, Zinna F, Pescitelli G, Mancinelli M. Synthesis and Stereodynamic and Emission Properties of Dissymmetric Bis-Aryl Carbazole Boranes and Identification of a CPL-Active B-C Atropisomeric Compound. J Org Chem 2023; 88:871-881. [PMID: 36599041 PMCID: PMC9872089 DOI: 10.1021/acs.joc.2c02209] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
We synthesized bis-aryl carbazole borane derivatives having emissive properties and axial chirality. The resolution of a thermally stable atropisomeric pair (compound 1b), due to a B-C chiral axis, was achieved by chiral stationary-phase high-performance liquid chromatography (CSP-HPLC). Complete photophysical properties of all compounds were measured and simulated by time-dependent density functional theory (TD-DFT) calculations of the complete fluorescence cycle, and circularly polarized luminescence spectra were obtained for the atropisomers of compound 1b, whose absolute configuration was derived using a TD-DFT simulation of the electronic circular dichroism (ECD) spectra.
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Affiliation(s)
- Daniel Pecorari
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Emanuele Giuliani
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Andrea Mazzanti
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Stefano Stagni
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Valentina Fiorini
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Giulia Vigarani
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy
| | - Francesco Zinna
- Department
of Chemistry and Industrial Chemistry, University
of Pisa, Via Moruzzi 13, 56124 Pisa, Italy
| | - Gennaro Pescitelli
- Department
of Chemistry and Industrial Chemistry, University
of Pisa, Via Moruzzi 13, 56124 Pisa, Italy
| | - Michele Mancinelli
- Department
of Industrial Chemistry “Toso Montanari”, University of Bologna, Viale del Risorgimento 4, 40136 Bologna, Italy,
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32
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Chaudhuri D, Patterson CH. TDDFT versus GW/BSE Methods for Prediction of Light Absorption and Emission in a TADF Emitter. J Phys Chem A 2022; 126:9627-9643. [PMID: 36515973 PMCID: PMC9806837 DOI: 10.1021/acs.jpca.2c06403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Design concepts for organic light emitting diode (OLED) emitters, which exhibit thermally activated delayed fluorescence (TADF) and thereby achieve quantum yields exceeding 25%, depend on singlet-triplet splitting energies of order kT to allow reverse intersystem crossing at ambient temperatures. Simulation methods for these systems must be able to treat relatively large organic molecules, as well as predict their excited state energies, transition energies, singlet-triplet splittings, and absorption and emission cross sections with reasonable accuracy, in order to prove useful in the design process. Here we compare predictions of TDDFT with M06-2X and ωB97X-D exchange-correlation functionals and a GoWo@HF/BSE method for these quantities in the well-studied DPTZ-DBTO2 TADF emitter molecule. Geometry optimization is performed for ground state (GS) and lowest donor-acceptor charge transfer (CT) state for each functional. Optical absorption and emission cross sections and energies are calculated at these geometries. Relaxation energies are on the order of 0.5 eV, and the importance of obtaining excited state equilibrium geometries in predicting delayed fluorescence is demonstrated. There are clear trends in predictions of GoWo@HF/BSE, and TDDFT/ωB97X-D and M06-2X methods in which the former method favors local exciton (LE) states while the latter favors DA CT states and ωB97X-D makes intermediate predictions. GoWo@HF/BSE suffers from triplet instability for LE states but not CT states relevant for TADF. Shifts in HOMO and LUMO levels on adding a conductor-like polarizable continuum model dielectric background are used to estimate changes in excitation energies on going from the gas phase to a solvated molecule.
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33
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Gómez S, Giovannini T, Cappelli C. Multiple Facets of Modeling Electronic Absorption Spectra of Systems in Solution. ACS PHYSICAL CHEMISTRY AU 2022; 3:1-16. [PMID: 36718266 PMCID: PMC9881242 DOI: 10.1021/acsphyschemau.2c00050] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 11/08/2022] [Accepted: 11/08/2022] [Indexed: 11/24/2022]
Abstract
In this Perspective, we outline the essential physicochemical aspects that need to be considered when building a reliable approach to describe absorption properties of solvated systems. In particular, we focus on how to properly model the complexity of the solvation phenomenon, arising from dynamical aspects and specific, strong solute-solvent interactions. To this end, conformational and configurational sampling techniques, such as Molecular Dynamics, have to be coupled to accurate fully atomistic Quantum Mechanical/Molecular Mechanics (QM/MM) methodologies. By exploiting different illustrative applications, we show that an effective reproduction of experimental spectral signals can be achieved by delicately balancing exhaustive sampling, hydrogen bonding, mutual polarization, and nonelectrostatic effects.
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34
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Zhang B, Cheng Z, Hou J. The electronic structures and nonlinear optical properties of Alkali and Alkali earth metal atoms doped C6H6Cl6: A density functional theoretical study. J Mol Graph Model 2022; 116:108263. [DOI: 10.1016/j.jmgm.2022.108263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Revised: 06/18/2022] [Accepted: 06/27/2022] [Indexed: 10/31/2022]
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35
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Jacobi R, Hernández-Castillo D, Sinambela N, Bösking J, Pannwitz A, González L. Computation of Förster Resonance Energy Transfer in Lipid Bilayer Membranes. J Phys Chem A 2022; 126:8070-8081. [PMID: 36260519 PMCID: PMC9639162 DOI: 10.1021/acs.jpca.2c04524] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
Abstract
![]()
Calculations of Förster
Resonance Energy Transfer (FRET)
often neglect the influence of different chromophore orientations
or changes in the spectral overlap. In this work, we present two computational
approaches to estimate the energy transfer rate between chromophores
embedded in lipid bilayer membranes. In the first approach, we assess
the transition dipole moments and the spectral overlap by means of
quantum chemical calculations in implicit solvation, and we investigate
the alignment and distance between the chromophores in classical molecular
dynamics simulations. In the second, all properties are evaluated
integrally with hybrid quantum mechanical/molecular mechanics (QM/MM)
calculations. Both approaches come with advantages and drawbacks,
and despite the fact that they do not agree quantitatively, they provide
complementary insights on the different factors that influence the
FRET rate. We hope that these models can be used as a basis to optimize
energy transfers in nonisotropic media.
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Affiliation(s)
- Richard Jacobi
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 17, 1090Vienna, Austria.,Doctoral School in Chemistry (DoSChem), University of Vienna, Währinger Straße 42, 1090Vienna, Austria
| | - David Hernández-Castillo
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 17, 1090Vienna, Austria.,Doctoral School in Chemistry (DoSChem), University of Vienna, Währinger Straße 42, 1090Vienna, Austria
| | - Novitasari Sinambela
- Institute of Inorganic Chemistry I, Ulm University, Albert-Einstein-Allee 11, 89081Ulm, Germany
| | - Julian Bösking
- Institute of Inorganic Chemistry I, Ulm University, Albert-Einstein-Allee 11, 89081Ulm, Germany
| | - Andrea Pannwitz
- Institute of Inorganic Chemistry I, Ulm University, Albert-Einstein-Allee 11, 89081Ulm, Germany
| | - Leticia González
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 17, 1090Vienna, Austria.,Vienna Research Platform on Accelerating Photoreaction Discovery, University of Vienna, Währinger Straße 17, 1090Vienna, Austria
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36
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Ahmed R, Manna AK. Origins of Molecular-Twist-Triggered Intersystem Crossing in Functional Perylenediimides: Singlet–Triplet Gap versus Spin–Orbit Coupling. J Phys Chem A 2022; 126:6594-6603. [DOI: 10.1021/acs.jpca.2c03455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Raka Ahmed
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, A.P 517619, India
| | - Arun K Manna
- Department of Chemistry and Center for Atomic, Molecular and Optical Sciences & Technologies, Indian Institute of Technology Tirupati, Tirupati, A.P 517619, India
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37
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Gronowski M, Kołos R. A DFT Study on the Excited Electronic States of Cyanopolyynes: Benchmarks and Applications. Molecules 2022; 27:molecules27185829. [PMID: 36144567 PMCID: PMC9500640 DOI: 10.3390/molecules27185829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2022] [Revised: 09/01/2022] [Accepted: 09/02/2022] [Indexed: 11/16/2022] Open
Abstract
Highly unsaturated chain molecules are interesting due to their potential application as nanowires and occurrence in interstellar space. Here, we focus on predicting the electronic spectra of polyynic nitriles HC2m+1N (m = 0–13) and dinitriles NC2n+2N (n = 0–14). The results of time-dependent density functional theory (TD-DFT) calculations are compared with the available gas-phase and noble gas matrix experimental data. We assessed the performance of fifteen functionals and five basis sets for reproducing (i) vibrationless electronic excitation energies and (ii) vibrational frequencies in the singlet excited states. We found that the basis sets of at least triple-ζ quality were necessary to describe the long molecules with alternate single and triple bonds. Vibrational frequency scaling factors are similar for the ground and excited states. The benchmarked spectroscopic parameters were shown to be acceptably reproduced with adequately chosen functionals, in particular ωB97X, CAM-B3LYP, B3LYP, B971, and B972. Select functionals were applied to study the electronic excitation of molecules up to HC27N and C30N2. It is demonstrated that optical excitation leads to a shift from the polyyne- to a cumulene-like electronic structure.
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38
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Medves M, Toffoli D, Stener M, Sementa L, Fortunelli A. Coupling between Plasmonic and Molecular Excitations: TDDFT Investigation of an Ag-Nanorod/BODIPY-Dye Interaction. J Phys Chem A 2022; 126:5890-5899. [PMID: 36001802 DOI: 10.1021/acs.jpca.2c04168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A time-dependent density functional theory (TDDFT) computational approach is employed to study the optical coupling between a plasmonic system (a Ag50 nanorod) and a fluorescent dye (BODIPY). It is found that the BODIPY dye can interact with a plasmonic system in a rather different and selective way according to the mutual orientation of the fragments. Indeed, (i) the plasmon excitation turns out to be sensitive to the presence of the BODIPY transition and (ii) this can lead to amplify or suppress the resonance accordingly to the relative orientation of the corresponding transition dipoles. To understand the coupling mechanism, we analyze the shape of the induced density in real space and the Individual Component Map of the Oscillator Strength (ICM-OS) plots and achieve a simple rationalization and insight on the origin and features of the coupling. The resulting possibility of understanding plasmon/fluorophore interactions by simple qualitative arguments opens the way to a rational design of hybrid (plasmon + dye) systems with the desired optical behavior.
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Affiliation(s)
- Marco Medves
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università di Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Daniele Toffoli
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università di Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Mauro Stener
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università di Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Luca Sementa
- CNR-ICCOM & IPCF, Consiglio Nazionale delle Ricerche, via G. Moruzzi 1, Pisa, 56124, Italy
| | - Alessandro Fortunelli
- CNR-ICCOM & IPCF, Consiglio Nazionale delle Ricerche, via G. Moruzzi 1, Pisa, 56124, Italy
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39
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Hall D, Sancho-García JC, Pershin A, Ricci G, Beljonne D, Zysman-Colman E, Olivier Y. Modeling of Multiresonant Thermally Activated Delayed Fluorescence Emitters─Properly Accounting for Electron Correlation Is Key! J Chem Theory Comput 2022; 18:4903-4918. [PMID: 35786892 DOI: 10.1021/acs.jctc.2c00141] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
With the surge of interest in multiresonant thermally activated delayed fluorescent (MR-TADF) materials, it is important that there exist computational methods to accurately model their excited states. Here, building on our previous work, we demonstrate how the spin-component scaling second-order approximate coupled-cluster (SCS-CC2), a wavefunction-based method, is robust at predicting the ΔEST (i.e., the energy difference between the lowest singlet S1 and triplet T1 excited states) of a large number of MR-TADF materials, with a mean average deviation (MAD) of 0.04 eV compared to experimental data. Time-dependent density functional theory calculations with the most common DFT functionals as well as the consideration of the Tamm-Dancoff approximation (TDA) consistently predict a much larger ΔEST as a result of a poorer account of Coulomb correlation as compared to SCS-CC2. Very interestingly, the use of a metric to assess the importance of higher order excitations in the SCS-CC2 wavefunctions shows that Coulomb correlation effects are substantially larger in the lowest singlet compared to the corresponding triplet and need to be accounted for a balanced description of the relevant electronic excited states. This is further highlighted with coupled cluster singles-only calculations, which predict very different S1 energies as compared to SCS-CC2 while T1 energies remain similar, leading to very large ΔEST, in complete disagreement with the experiments. We compared our SCS-CC2/cc-pVDZ with other wavefunction approaches, namely, CC2/cc-pVDZ and SOS-CC2/cc-pVDZ leading to similar performances. Using SCS-CC2, we investigate the excited-state properties of MR-TADF emitters showcasing large ΔET2T1 for the majority of emitters, while π-electron extension emerges as the best strategy to minimize ΔEST. We also employed SCS-CC2 to evaluate donor-acceptor systems that contain a MR-TADF moiety acting as the acceptor and show that the broad emission observed for some of these compounds arises from the solvent-promoted stabilization of a higher-lying charge-transfer singlet state (S2). This work highlights the importance of using wavefunction methods in relation to MR-TADF emitter design and associated photophysics.
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Affiliation(s)
- David Hall
- Organic Semiconductor Centre, EaStCHEM School of Chemistry, University of St Andrews, KY16 9ST St Andrews, U.K.,Laboratory for Chemistry of Novel Materials, University of Mons, 7000 Mons, Belgium
| | | | - Anton Pershin
- Wigner Research Centre for Physics, P.O. Box 49,Budapest 1121, Hungary
| | - Gaetano Ricci
- Laboratory for Computational Modeling of Functional Materials, Namur Institute of Structured Matter, Université de Namur, Rue de Bruxelles, 61, 5000 Namur, Belgium
| | - David Beljonne
- Laboratory for Chemistry of Novel Materials, University of Mons, 7000 Mons, Belgium
| | - Eli Zysman-Colman
- Organic Semiconductor Centre, EaStCHEM School of Chemistry, University of St Andrews, KY16 9ST St Andrews, U.K
| | - Yoann Olivier
- Laboratory for Computational Modeling of Functional Materials, Namur Institute of Structured Matter, Université de Namur, Rue de Bruxelles, 61, 5000 Namur, Belgium
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40
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Kostjukov V. Acriflavine in aqueous solution: excitation and hydration. J Mol Model 2022; 28:194. [PMID: 35723744 DOI: 10.1007/s00894-022-05182-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2022] [Accepted: 06/03/2022] [Indexed: 10/18/2022]
Abstract
Using TD-DFT/DFT, the ground and excited states of the acriflavine dye were studied in an aqueous medium. The mutual influence of photoexcitation and strong hydrogen bonds with the solvent was studied by comparing the purely implicit and combined modeling of the aqueous environment of the dye. The excitation of acriflavine was calculated considering the vibronic coupling. The effect of photoexcitation on dye vibrations was analyzed. The spatial structure of the acriflavine H-dimer was obtained and its absorption was estimated.
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Affiliation(s)
- Victor Kostjukov
- Physics Department, Sevastopol State University, Universitetskaya St., 33, Sevastopol, 299053, Crimea.
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41
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Kron KJ, Hunt JR, Dawlaty JM, Mallikarjun Sharada S. Modeling and Characterization of Exciplexes in Photoredox CO 2 Reduction: Insights from Quantum Chemistry and Fluorescence Spectroscopy. J Phys Chem A 2022; 126:2319-2329. [PMID: 35385660 DOI: 10.1021/acs.jpca.1c10658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Interactions between excited-state arenes and amines can lead to the formation of structures with a distinct emission behavior. These excited-state complexes or exciplexes can reduce the ability of the arene to participate in other reactions, such as CO2 reduction, or increase the likelihood of degradation via Birch reduction. Exciplex geometries are necessary to understand photophysical behavior and probe degradation pathways but are challenging to calculate. We establish a detailed computational protocol for calculation, verification, and characterization of exciplexes. Using fluorescence spectroscopy, we first demonstrate the formation of exciplexes between excited-state oligo-(p-phenylene) (OPP), shown to successfully carry out CO2 reduction, and triethylamine. Time-dependent density functional theory is employed to optimize the geometries of these exciplexes, which are validated by comparing both emission energies and their solvatochromism with the experiment. Excited-state energy decomposition analysis confirms the predominant role played by charge transfer interactions in the red shift of emissions relative to the isolated excited-state OPP*. We find that although the exciplex emission frequency depends strongly on solvent dielectric, the extent of charge separation in an exciplex does not. Our results also suggest that the formation of solvent-separated ionic radical states upon complete electron transfer competes with exciplex formation in higher-dielectric solvents, thereby leading to reduced exciplex emission intensities in fluorescence experiments.
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Affiliation(s)
- Kareesa J Kron
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, California 90089, United States
| | - Jonathan Ryan Hunt
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States
| | - Jahan M Dawlaty
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States
| | - Shaama Mallikarjun Sharada
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, California 90089, United States.,Department of Chemistry, University of Southern California, Los Angeles, California 90089, United States
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42
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ZHU ZHE, Higashi M, Saito S. Excited states of chlorophyll a and b in solution by time-dependent density functional theory. J Chem Phys 2022; 156:124111. [DOI: 10.1063/5.0083395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The ground state and excited state electronic properties of chlorophyll (Chl) a and Chl b in diethyl ether, acetone, and ethanol solutions are investigated using quantum mechanical and molecular mechanical calculations with density functional theory (DFT) and time-dependent DFT (TDDFT). Although the DFT/TDDFT methods are widely used, the electronic structures of molecules, especially large molecules, calculated with these methods are known to be strongly dependent on the functionals and the parameters used in functionals. Here, we optimize the range-separated parameter, µ, of the CAM-B3LYP functional of Chl a and Chl b to reproduce the experimental excitation energy differences of these Chl molecules in solution. The optimal values of µ for Chl a and Chl b are smaller than the default value of µ and that for bacteriochlorophyll a, indicating the change in electronic distribution, i.e., an increase in electron delocalization, within the molecule. We find that the electronic distribution of Chl b with an extra formyl group is different from that of Chl a. We also find that the polarity of solution and hydrogen bond cause the decrease in the excitation energies and the increase in the widths of excitation energy distributions of Chl a and Chl b. The present results are expected to be useful for understanding the electronic properties of each pigment molecule in a local heterogeneous environment, which will play an important role in the excitation energy transfer in light-harvesting complex II.
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Affiliation(s)
| | - Masahiro Higashi
- Department of Molecular Engineering, Kyoto University - Katsura Campus, Japan
| | - Shinji Saito
- Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, Japan
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43
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Kupfer S, Wächtler M, Guthmuller J. Light‐Driven Multi‐Charge Separation in a Push‐Pull Ruthenium‐based Photosensitizer – Assessed by RASSCF and TDDFT Simulations. CHEMPHOTOCHEM 2022. [DOI: 10.1002/cptc.202200010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Stephan Kupfer
- Friedrich Schiller Universitat Jena Chemisch Geowissenschaftliche Fakultat Institute of Physical Chemistry Helmholtzweg 1 07743 Jena GERMANY
| | - Maria Wächtler
- Leibniz Institute of Photonic Technology: Leibniz-Institut fur Photonische Technologien Functional Interfaces GERMANY
| | - Julien Guthmuller
- Gdansk University of Technology: Politechnika Gdanska Institute of Physics and Computer Science POLAND
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44
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Chen Y, Tseng SM, Chang KH, Chou PT. Energy Counterbalance to Harness Photoinduced Structural Planarization of Dibenzo[b,f]azepines toward Thermal Reversibility. J Am Chem Soc 2022; 144:1748-1757. [DOI: 10.1021/jacs.1c11231] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Yi Chen
- Department of Chemistry, National Taiwan University, Taipei 10617, Taiwan, Republic of China
| | - Sheng-Ming Tseng
- Department of Chemistry, National Taiwan University, Taipei 10617, Taiwan, Republic of China
| | - Kai-Hsin Chang
- Department of Chemistry, National Taiwan University, Taipei 10617, Taiwan, Republic of China
| | - Pi-Tai Chou
- Department of Chemistry, National Taiwan University, Taipei 10617, Taiwan, Republic of China
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45
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Dehkordi MM, Asgarshamsi MH, Fassihi A, Zborowski KK. A Comparative DFT Study on the Antioxidant Activity of some Novel 3-hydroxypyridine-4-one Derivatives. Chem Biodivers 2022; 19:e202100703. [PMID: 34997823 DOI: 10.1002/cbdv.202100703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Accepted: 01/07/2022] [Indexed: 11/06/2022]
Abstract
The current study on the antioxidant activity of Kojic acid and 3-hydroxypyridine-4-one derivatives was performed by implementation of density functional theory calculations with the B3LYP hybrid functional and the 6-311++ G** basis set in Polarizable Continuum Model. Compounds under evaluation were previously synthesized by our research group. The DPPH scavenging effect and IC 50 values of them in mM concentrations were evaluated. Subsequently, various electronic and energetic descriptors such as HOMO and LUMO energy gaps, bonding dissociation enthalpy of OH bond, ionization potential, electron affinity, hardness, and softness, NBOs and spin density of radical and neutral species were used to study antioxidant properties of investigated compounds. The computations detected two compounds, HP3 and HP4 , with significant antioxidant activity. Energetic descriptors indicated that SPLET mechanism is preferred over than other antioxidant mechanism and computational results were in accordance with the experimental results.
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Affiliation(s)
- Mehrdad M Dehkordi
- Isfahan University of Medical Sciences, School of Pharmacy, Hezar Jerib street, 81746-73461, Isfahan, IRAN (ISLAMIC REPUBLIC OF)
| | - Mohammad H Asgarshamsi
- Isfahan University of Medical Sciences, School of Pharmacy, Hezar Jerib street, 81746-73461, Isfahan, IRAN (ISLAMIC REPUBLIC OF)
| | - Afshin Fassihi
- Isfahan University of Medical Sciences, School of Pharmacy, Hezar Jerib street, 81746-73461, Isfahan, IRAN (ISLAMIC REPUBLIC OF)
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46
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Kaczmarek-Kȩdziera A, Ośmiałowski B, Żuchowski PS, Kȩdziera D. Supramolecular Approach to Tuning the Photophysical Properties of Quadrupolar Squaraines. Front Chem 2022; 9:800541. [PMID: 35071187 PMCID: PMC8766669 DOI: 10.3389/fchem.2021.800541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Accepted: 12/03/2021] [Indexed: 11/19/2022] Open
Abstract
In the present study, the influence of the hydrogen bonding for the one- and two-photon absorption of the prototypical squaraine dye is investigated with quantum chemistry tools. The central squaraine unit is bound by strong hydrogen bonds with 4-substituted N,N'-diphenylurea and, alternatively, N,N'-diphenylthiourea molecules, which affects to a high extend the properties of the squaraine electron accepting moiety, thus shifting its maximum absorption wavelength and enhancing the TPA cross section. The replacement of oxygen by sulfur atoms in the squaraine central ring, known to affect its photophysical behavior, is considered here as the way of modifying the strength and nature of the intermolecular contacts. Additionally, the influence of the oxygen-by-sulfur replacement is also considered in the N,N'-diphenylurea moiety, as the factor affecting the acidity of the N-H protons. The introduction of the sequence of the substituents of varying electron-donating or electron-withdrawing characters in the position 4 of N,N'-diphenyl(thio)urea subsystems allows to finely tune the hydrogen bonding with the central squaraine unit by further modification of the N-H bond characteristics. All of these structural modifications lead to the controlled adjustment of the electron density distribution, and thus, the properties affected such as transition moments and absorption intensity. Ab initio calculations provide strong support for this way of tailoring of one- or two-photon absorption due to the obtained strong hypsochromic shift of the maximum one-photon absorption wavelength observed particularly for thiosquaraine complexes and an increase in the TPA wavelength together with the increase in the TPA cross section. Moreover, the source of the strong modification of the thiosquaraine OPA in contrast to the pristine oxosquaraine upon N,N'-diphenyl(thio)urea substitution is determined. Furthermore, for the first time, the linear dependence of the non-additivity in the interaction energy on the Hammett substituent constant is reported. The stronger the electron-donating character of the substituent, the larger the three-body non-additive components and the larger their percentage to the total interaction energy.
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Affiliation(s)
| | - Borys Ośmiałowski
- Faculty of Chemistry, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Piotr S. Żuchowski
- Institute of Physics, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Dariusz Kȩdziera
- Faculty of Chemistry, Nicolaus Copernicus University in Toruń, Toruń, Poland
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47
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Helal W, Alkhatib Q, Gharaibeh M. Can time-dependent double hybrid density functionals accurately predict electronic excitation energies of BODIPY compounds? COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2021.113531] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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48
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Alkhatib Q, Helal W, Afaneh AT. Assessment of time-dependent density functionals for the electronic excitation energies of organic dyes used in DSSCs. NEW J CHEM 2022. [DOI: 10.1039/d2nj00210h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The absorption spectra modeled as the vertical excitation energies of 13 dye sensitizers used in dye-sensitized solar cells (DSSCs) are benchmarked by means of time-dependent (TD)-DFT, using 36 functionals from different DFT rungs.
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Affiliation(s)
- Qabas Alkhatib
- Department of Chemistry, The University of Jordan, Amman 11942, Jordan
| | - Wissam Helal
- Department of Chemistry, The University of Jordan, Amman 11942, Jordan
| | - Akef T. Afaneh
- Department of Chemistry, Al-Balqa Applied University, 19117 Al-Salt, Jordan
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49
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Drzewiecka-Matuszek A, Rutkowska-Zbik D. Application of TD-DFT Theory to Studying Porphyrinoid-Based Photosensitizers for Photodynamic Therapy: A Review. Molecules 2021; 26:7176. [PMID: 34885763 PMCID: PMC8658767 DOI: 10.3390/molecules26237176] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2021] [Revised: 11/23/2021] [Accepted: 11/24/2021] [Indexed: 11/30/2022] Open
Abstract
An important focus for innovation in photodynamic therapy (PDT) is theoretical investigations. They employ mostly methods based on Time-Dependent Density Functional Theory (TD-DFT) to study the photochemical properties of photosensitizers. In the current article we review the existing state-of-the-art TD-DFT methods (and beyond) which are employed to study the properties of porphyrinoid-based systems. The review is organized in such a way that each paragraph is devoted to a separate aspect of the PDT mechanism, e.g., correct prediction of the absorption spectra, determination of the singlet-triplet intersystem crossing, and interaction with molecular oxygen. Aspects of the calculation schemes are discussed, such as the choice of the most suitable functional and inclusion of a solvent. Finally, quantitative structure-activity relationship (QSAR) methods used to explore the photochemistry of porphyrinoid-based systems are discussed.
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Affiliation(s)
| | - Dorota Rutkowska-Zbik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Krakow, Poland;
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50
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Prompt and Long-Lived Anti-Kasha Emission from Organic Dyes. Molecules 2021; 26:molecules26226999. [PMID: 34834093 PMCID: PMC8623836 DOI: 10.3390/molecules26226999] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Revised: 11/12/2021] [Accepted: 11/15/2021] [Indexed: 11/17/2022] Open
Abstract
Anti-Kasha behavior has been the subject of intense debate in the last few years, as demonstrated by the high number of papers appearing in the literature on this topic, dealing with both mechanistic and applicative aspects of this phenomenon. Examples of anomalous emitters reported in the last 10 years are collected in the present review, which is focused on strictly anti-Kasha organic molecules displaying radiative deactivation from Sn and/or Tn, with n greater than 1.
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