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Komiyama M. Monomeric, Oligomeric, Polymeric, and Supramolecular Cyclodextrins as Catalysts for Green Chemistry. RESEARCH (WASHINGTON, D.C.) 2024; 7:0466. [PMID: 39253101 PMCID: PMC11381675 DOI: 10.34133/research.0466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Accepted: 08/09/2024] [Indexed: 09/11/2024]
Abstract
This review comprehensively covers recent developments of cyclodextrin-mediated chemical transformations for green chemistry. These cyclic oligomers of glucose are nontoxic, eco-friendly, and recyclable to accomplish eminent functions in water. Their most important feature is to form inclusion complexes with reactants, intermediates, and/or catalysts. As a result, their cavities serve as sterically restricted and apolar reaction fields to promote the efficiency and selectivity of reactions. Furthermore, unstable reagents and intermediates are protected from undesired side reactions. The scope of their applications has been further widened through covalent or noncovalent modifications. Combinations of them with metal catalysis are especially successful. In terms of these effects, various chemical reactions are achieved with high selectivity and yield so that valuable chemicals are synthesized from multiple components in one-pot reactions. Furthermore, cyclodextrin units are orderly assembled in oligomers and polymers to show their cooperation for advanced properties. Recently, cyclodextrin-based metal-organic frameworks and polyoxometalate-cyclodextrin frameworks have been fabricated and employed for unique applications. Cyclodextrins fulfill many requirements for green chemistry and should make enormous contributions to this growing field.
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Affiliation(s)
- Makoto Komiyama
- Research Center for Advanced Science and Technology (RCAST), The University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8904, Japan
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2
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Gera R, De P, Singh KK, Jannuzzi SAV, Mohanty A, Velasco L, Kulbir, Kumar P, Marco JF, Nagarajan K, Pecharromán C, Rodríguez-Pascual PM, DeBeer S, Moonshiram D, Gupta SS, Dasgupta J. Trapping an Elusive Fe(IV)-Superoxo Intermediate Inside a Self-Assembled Nanocage in Water at Room Temperature. J Am Chem Soc 2024; 146:21729-21741. [PMID: 39078020 DOI: 10.1021/jacs.4c05849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/31/2024]
Abstract
Molecular cavities that mimic natural metalloenzymes have shown the potential to trap elusive reaction intermediates. Here, we demonstrate the formation of a rare yet stable Fe(IV)-superoxo intermediate at room temperature subsequent to dioxygen binding at the Fe(III) site of a (Et4N)2[FeIII(Cl)(bTAML)] complex confined inside the hydrophobic interior of a water-soluble Pd6L412+ nanocage. Using a combination of electron paramagnetic resonance, Mössbauer, Raman/IR vibrational, X-ray absorption, and emission spectroscopies, we demonstrate that the cage-encapsulated complex has a Fe(IV) oxidation state characterized by a stable S = 1/2 spin state and a short Fe-O bond distance of ∼1.70 Å. We find that the O2 reaction in confinement is reversible, while the formed Fe(IV)-superoxo complex readily reacts when presented with substrates having weak C-H bonds, highlighting the lability of the O-O bond. We envision that such optimally trapped high-valent superoxos can show new classes of reactivities catalyzing both oxygen atom transfer and C-H bond activation reactions.
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Affiliation(s)
- Rahul Gera
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai 400005, India
- Department of Education in Science and Mathematics, Regional Institute of Education - Mysuru, NCERT, Mysuru 570006, India
| | - Puja De
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, West Bengal 741246, India
| | - Kundan K Singh
- Chemical Engineering Division, CSIR-National Chemical Laboratory, Pune, Maharashtra 411008, India
- Chemistry Department, Indian Institute of Technology, Dharwad 580007, India
| | - Sergio A V Jannuzzi
- Department of Inorganic Spectroscopy, Max Planck Institute for Chemical Energy Conversion, Stiftstr. 34-36, Mülheim an der Ruhr 45470, Germany
| | - Aisworika Mohanty
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai 400005, India
| | - Lucia Velasco
- Instituto de Ciencia de Materiales de Madrid Consejo Superior de Investigaciones Científicas Sor Juana Inés de la Cruz, 3, Madrid 28049, Spain
| | - Kulbir
- Department of Chemistry, Indian Institute of Science Education and Research (IISER), Tirupati 517507, India
| | - Pankaj Kumar
- Department of Chemistry, Indian Institute of Science Education and Research (IISER), Tirupati 517507, India
| | - J F Marco
- Instituto de Quimica Fisica Blas Cabrera, Consejo Superior de Investigaciones Científicas, Serrano 119, Madrid 28006, Spain
| | - Kalaivanan Nagarajan
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai 400005, India
| | - Carlos Pecharromán
- Instituto de Ciencia de Materiales de Madrid Consejo Superior de Investigaciones Científicas Sor Juana Inés de la Cruz, 3, Madrid 28049, Spain
| | - P M Rodríguez-Pascual
- Instituto de Ciencia de Materiales de Madrid Consejo Superior de Investigaciones Científicas Sor Juana Inés de la Cruz, 3, Madrid 28049, Spain
| | - Serena DeBeer
- Department of Inorganic Spectroscopy, Max Planck Institute for Chemical Energy Conversion, Stiftstr. 34-36, Mülheim an der Ruhr 45470, Germany
| | - Dooshaye Moonshiram
- Instituto de Ciencia de Materiales de Madrid Consejo Superior de Investigaciones Científicas Sor Juana Inés de la Cruz, 3, Madrid 28049, Spain
| | - Sayam Sen Gupta
- Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, West Bengal 741246, India
| | - Jyotishman Dasgupta
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai 400005, India
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3
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Parker AL, Johnstone TC. Carbon monoxide poisoning: A problem uniquely suited to a medicinal inorganic chemistry solution. J Inorg Biochem 2024; 251:112453. [PMID: 38100903 DOI: 10.1016/j.jinorgbio.2023.112453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 11/30/2023] [Accepted: 12/03/2023] [Indexed: 12/17/2023]
Abstract
Carbon monoxide poisoning is one of the most common forms of poisoning in the world. Although the primary mode of treatment, oxygen therapy, is highly effective in many cases, there are instances in which it is inadequate or inappropriate. Whereas oxygen therapy relies on high levels of a low-affinity ligand (O2) to displace a high-affinity ligand (CO) from metalloproteins, an antidote strategy relies on introducing a molecule with a higher affinity for CO than native proteins (Kantidote,CO > Kprotein,CO). Based on the fundamental chemistry of CO, such an antidote is most likely required to be an inorganic compound featuring an electron-rich transition metal. A review is provided of the protein-, supramolecular complex-, and small molecule-based CO poisoning antidote platforms that are currently under investigation.
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Affiliation(s)
- A Leila Parker
- Department of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, California 95064, United States
| | - Timothy C Johnstone
- Department of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, California 95064, United States..
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4
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Dent MR, Rose JJ, Tejero J, Gladwin MT. Carbon Monoxide Poisoning: From Microbes to Therapeutics. Annu Rev Med 2024; 75:337-351. [PMID: 37582490 PMCID: PMC11160397 DOI: 10.1146/annurev-med-052422-020045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/17/2023]
Abstract
Carbon monoxide (CO) poisoning leads to 50,000-100,000 emergency room visits and 1,500-2,000 deaths each year in the United States alone. Even with treatment, survivors often suffer from long-term cardiac and neurocognitive deficits, highlighting a clear unmet medical need for novel therapeutic strategies that reduce morbidity and mortality associated with CO poisoning. This review examines the prevalence and impact of CO poisoning and pathophysiology in humans and highlights recent advances in therapeutic strategies that accelerate CO clearance and mitigate toxicity. We focus on recent developments of high-affinity molecules that take advantage of the uniquely strong interaction between CO and heme to selectively bind and sequester CO in preclinical models. These scavengers, which employ heme-binding scaffolds ranging from organic small molecules to hemoproteins derived from humans and potentially even microorganisms, show promise as field-deployable antidotes that may rapidly accelerate CO clearance and improve outcomes for survivors of acute CO poisoning.
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Affiliation(s)
- Matthew R Dent
- Heart, Lung, Blood and Vascular Medicine Institute, University of Pittsburgh, Pittsburgh, Pennsylvania, USA; ,
| | - Jason J Rose
- Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland, USA; ,
| | - Jesús Tejero
- Heart, Lung, Blood and Vascular Medicine Institute, University of Pittsburgh, Pittsburgh, Pennsylvania, USA; ,
- Division of Pulmonary, Allergy and Critical Care Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
- Department of Bioengineering, Swanson School of Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
- Department of Pharmacology and Chemical Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
| | - Mark T Gladwin
- Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland, USA; ,
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5
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Liu H, Liu T, Qin Q, Li B, Li F, Zhang B, Sun W. The importance of and difficulties involved in creating molecular probes for a carbon monoxide gasotransmitter. Analyst 2023; 148:3952-3970. [PMID: 37522849 DOI: 10.1039/d3an00849e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/01/2023]
Abstract
As one of the triumvirate of recognized gasotransmitter molecules, namely NO, H2S, and CO, the physiological effects of CO and its potential as a biomarker have been widely investigated, garnering particular attention due to its reported hypotensive, anti-inflammatory, and cytoprotective properties, making it a promising therapeutic agent. However, the development of CO molecular probes has remained relatively stagnant in comparison with the fluorescent probes for NO and H2S, owing to its inert molecular state under physiological conditions. In this review, starting from elucidating the definition and significance of CO as a gasotransmitter, the imperative for the advancement of CO probes, especially fluorescent probes, is expounded. Subsequently, the current state of development of CO probe methodologies is comprehensively reviewed, with an overview of the challenges and prospects in this burgeoning field of research.
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Affiliation(s)
- Huanying Liu
- School of Mechanical and Power Engineering, Dalian Ocean University, Dalian 116023, China
| | - Ting Liu
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials Oriented Chemical Engineering, Dalian University of Technology, Dalian 116024, China.
| | - Qian Qin
- College of Medical Laboratory, Dalian Medical University, Dalian 116044, China.
| | - Bingyu Li
- College of Medical Laboratory, Dalian Medical University, Dalian 116044, China.
| | - Fasheng Li
- College of Medical Laboratory, Dalian Medical University, Dalian 116044, China.
| | - Boyu Zhang
- College of Medical Laboratory, Dalian Medical University, Dalian 116044, China.
| | - Wen Sun
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials Oriented Chemical Engineering, Dalian University of Technology, Dalian 116024, China.
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6
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Noguchi M, Mao Q, Nakagami A, Kitagishi H. Spontaneous reduction of iron(III)porphyrin to iron(II)porphyrin-CO complex in mouse circulation. Chem Commun (Camb) 2023; 59:6211-6214. [PMID: 37129063 DOI: 10.1039/d3cc00420a] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Iron(II/III)porphyrin/cyclodextrin inclusion complexes serve as hemoprotein models in vivo. Here we showed the iron(III)porphyrin complex to be spontaneously reduced to its iron(II) state in mouse circulation. The reduced complex bound endogenous CO from carboxyhemoglobin, which was followed by urinary excretion. The natural reduction system was found to be effective for synthetic heme-model compounds.
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Affiliation(s)
- Masataka Noguchi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Qiyue Mao
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Atsuki Nakagami
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
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7
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Mohan S, Barel LA, Benrahla DE, Do B, Mao Q, Kitagishi H, Rivard M, Motterlini R, Foresti R. Development of carbon monoxide-releasing molecules conjugated to polysaccharides (glyco-CORMs) for delivering CO during obesity. Pharmacol Res 2023; 191:106770. [PMID: 37068532 DOI: 10.1016/j.phrs.2023.106770] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 04/06/2023] [Accepted: 04/13/2023] [Indexed: 04/19/2023]
Abstract
Metal carbonyls have been developed as carbon monoxide-releasing molecules (CO-RMs) to deliver CO for therapeutic purposes. The manganese-based CORM-401 has been recently reported to exert beneficial effects in obese animals by reducing body weight gain, improving glucose metabolism and reprogramming adipose tissue towards a healthy phenotype. Here, we report on the synthesis and characterization of glyco-CORMs, obtained by grafting manganese carbonyls on dextrans (70 and 40kDa), based on the fact that polysaccharides facilitate the targeting of drugs to adipose tissue. We found that glyco-CORMs efficiently deliver CO to cells in vitro with higher CO accumulation in adipocytes compared to other cell types. Oral administration of two selected glyco-CORMs (5b and 6b) resulted in CO accumulation in various organs, including adipose tissue. In addition, glyco-CORM 6b administered for eight weeks elicited anti-obesity and positive metabolic effects in mice fed a high fat diet. Our study highlights the feasibility of creating carriers with multiple functionalized CO-RMs.
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Affiliation(s)
- Shruti Mohan
- University Paris-Est Créteil, INSERM, IMRB, F-94010, Créteil, France.
| | | | | | - Bernard Do
- Materials and Health, University Paris-Saclay, 91400 Orsay, France; Department of Pharmacy, Henri Mondor Hospital, AP-HP, 94000 Créteil, France.
| | - Qiyue Mao
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Michael Rivard
- ICMPE (UMR 7182), CNRS, UPEC, University Paris Est, F-94320 Thiais, France.
| | | | - Roberta Foresti
- University Paris-Est Créteil, INSERM, IMRB, F-94010, Créteil, France.
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8
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Kitagishi H, Mao Q. Capture of carbon monoxide using a heme protein model: from biomimetic chemistry of heme proteins to physiological and therapeutic applications. Polym J 2021. [DOI: 10.1038/s41428-021-00591-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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9
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Mamardashvili G, Mamardashvili N, Koifman O. Macrocyclic Receptors for Identification and Selective Binding of Substrates of Different Nature. Molecules 2021; 26:molecules26175292. [PMID: 34500725 PMCID: PMC8433985 DOI: 10.3390/molecules26175292] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 08/04/2021] [Accepted: 08/18/2021] [Indexed: 02/05/2023] Open
Abstract
Molecular recognition of host/guest molecules represents the basis of many biological processes and phenomena. Enzymatic catalysis and inhibition, immunological response, reproduction of genetic information, biological regulatory functions, the effects of drugs, and ion transfer-all these processes include the stage of structure recognition during complexation. The goal of this review is to solicit and publish the latest advances in the design and sensing and binding abilities of porphyrin-based heterotopic receptors with well-defined geometries, the recognition ability of which is realized due to ionic, H-bridge, charge transfer, hydrophobic, and hydrophilic interactions. The dissection of the considered low-energy processes at the molecular scale expands our capabilities in the development of effective systems for controlled recognition, selective delivery, and prolonged release of substrates of different natures (including drugs) to their sites of functioning.
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Mao Q, Das PK, Le Gac S, Boitrel B, Dorcet V, Oohora K, Hayashi T, Kitagishi H. Functional Myoglobin Model Composed of a Strapped Porphyrin/Cyclodextrin Supramolecular Complex with an Overhanging COOH That Increases O 2/CO Binding Selectivity in Aqueous Solution. Inorg Chem 2021; 60:12392-12404. [PMID: 34319113 DOI: 10.1021/acs.inorgchem.1c01628] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A water-soluble strapped iron(III)tetraarylporphyrin (FeIIIPor-1) bearing two propylpyridinium groups at the side chains and a carboxylic acid group at the overhanging position of the strap was synthesized to mimic the function of myoglobin with the distal polar functionality in aqueous solution. FeIIIPor-1 forms a stable 1:1 inclusion complex with a per-O-methylated β-cyclodextrin dimer having a pyridine linker (Py3OCD), providing a hydrophobic environment and a proximal fifth ligand to stabilize the O2-complex. The ferrous complex (FeIIPorCD-1) binds both O2 and CO in aqueous solution. The O2 and CO binding affinities (P1/2O2 and P1/2CO) and half-life time (t1/2) of the O2 complex of FeIIPorCD-1 are 6.3 and 0.021 Torr, and 7 h, respectively, at pH 7 and 25 °C. The control compound without the strap structure (FeIIPorCD-2) has similar oxygen binding characteristics (P1/2O2 = 8.0 Torr), but much higher CO binding affinity (P1/2CO = 3.8 × 10-4 Torr), and longer t1/2 (30 h). The O2 and CO kinetics indicate that the strapped structure in FeIIPorCD-1 inhibits the entrance of these gaseous ligands into the iron(II) center, as evidenced by lower konO2 and konCO values. Interestingly, the CO complex of FeIIPorCD-1 is significantly destabilized (relatively larger koffCO), while the koffO2 value is much smaller than that of FeIIPorCD-2, resulting in significantly increased O2/CO selectivity (reduced M value, where M = P1/2O2/P1/2CO = 320) in FeIIPorCD-1 compared to FeIIPorCD-2 (M = 21000).
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Affiliation(s)
- Qiyue Mao
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe-city, Kyoto 610-0321, Japan
| | - Pradip K Das
- Institut des Sciences Chimiques de Rennes, Université Rennes, CNRS, UMR 6226, Rennes F-35000, France
| | - Stéphane Le Gac
- Institut des Sciences Chimiques de Rennes, Université Rennes, CNRS, UMR 6226, Rennes F-35000, France
| | - Bernard Boitrel
- Institut des Sciences Chimiques de Rennes, Université Rennes, CNRS, UMR 6226, Rennes F-35000, France
| | - Vincent Dorcet
- Institut des Sciences Chimiques de Rennes, Université Rennes, CNRS, UMR 6226, Rennes F-35000, France
| | - Koji Oohora
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita 565-0871, Japan
| | - Takashi Hayashi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita 565-0871, Japan
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe-city, Kyoto 610-0321, Japan
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11
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Gjuroski I, Furrer J, Vermathen M. Probing the Interactions of Porphyrins with Macromolecules Using NMR Spectroscopy Techniques. Molecules 2021; 26:1942. [PMID: 33808335 PMCID: PMC8037866 DOI: 10.3390/molecules26071942] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Revised: 03/22/2021] [Accepted: 03/24/2021] [Indexed: 12/11/2022] Open
Abstract
Porphyrinic compounds are widespread in nature and play key roles in biological processes such as oxygen transport in blood, enzymatic redox reactions or photosynthesis. In addition, both naturally derived as well as synthetic porphyrinic compounds are extensively explored for biomedical and technical applications such as photodynamic therapy (PDT) or photovoltaic systems, respectively. Their unique electronic structures and photophysical properties make this class of compounds so interesting for the multiple functions encountered. It is therefore not surprising that optical methods are typically the prevalent analytical tool applied in characterization and processes involving porphyrinic compounds. However, a wealth of complementary information can be obtained from NMR spectroscopic techniques. Based on the advantage of providing structural and dynamic information with atomic resolution simultaneously, NMR spectroscopy is a powerful method for studying molecular interactions between porphyrinic compounds and macromolecules. Such interactions are of special interest in medical applications of porphyrinic photosensitizers that are mostly combined with macromolecular carrier systems. The macromolecular surrounding typically stabilizes the encapsulated drug and may also modify its physical properties. Moreover, the interaction with macromolecular physiological components needs to be explored to understand and control mechanisms of action and therapeutic efficacy. This review focuses on such non-covalent interactions of porphyrinic drugs with synthetic polymers as well as with biomolecules such as phospholipids or proteins. A brief introduction into various NMR spectroscopic techniques is given including chemical shift perturbation methods, NOE enhancement spectroscopy, relaxation time measurements and diffusion-ordered spectroscopy. How these NMR tools are used to address porphyrin-macromolecule interactions with respect to their function in biomedical applications is the central point of the current review.
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Affiliation(s)
| | | | - Martina Vermathen
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, 3012 Bern, Switzerland; (I.G.); (J.F.)
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12
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Mao Q, Kawaguchi AT, Mizobata S, Motterlini R, Foresti R, Kitagishi H. Sensitive quantification of carbon monoxide in vivo reveals a protective role of circulating hemoglobin in CO intoxication. Commun Biol 2021; 4:425. [PMID: 33782534 PMCID: PMC8007703 DOI: 10.1038/s42003-021-01880-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Accepted: 02/17/2021] [Indexed: 12/14/2022] Open
Abstract
Carbon monoxide (CO) is a gaseous molecule known as the silent killer. It is widely believed that an increase in blood carboxyhemoglobin (CO-Hb) is the best biomarker to define CO intoxication, while the fact that CO accumulation in tissues is the most likely direct cause of mortality is less investigated. There is no reliable method other than gas chromatography to accurately determine CO content in tissues. Here we report the properties and usage of hemoCD1, a synthetic supramolecular compound composed of an iron(II)porphyrin and a cyclodextrin dimer, as an accessible reagent for a simple colorimetric assay to quantify CO in biological samples. The assay was validated in various organ tissues collected from rats under normal conditions and after exposure to CO. The kinetic profile of CO in blood and tissues after CO treatment suggested that CO accumulation in tissues is prevented by circulating Hb, revealing a protective role of Hb in CO intoxication. Furthermore, hemoCD1 was used in vivo as a CO removal agent, showing that it acts as an effective adjuvant to O2 ventilation to eliminate residual CO accumulated in organs, including the brain. These findings open new therapeutic perspectives to counteract the toxicity associated with CO poisoning. Mao et al. report highly sensitive quantification of carbon monoxide with a simple colorimetric assay, exploiting a synthetic supramolecular compound, hemoCD1. It can reveal distribution of CO in organs including the brain and can also serve as a CO scavenger for residual CO accumulated in organs. Finally, the authors showed circulating hemoglobin plays a protective role in CO intoxication.
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Affiliation(s)
- Qiyue Mao
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
| | - Akira T Kawaguchi
- Cell Transplantation and Regenerative Medicine, Tokai University, Isehara, Kanagawa, Japan
| | - Shun Mizobata
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
| | | | - Roberta Foresti
- University Paris Est Creteil, INSERM, IMRB, Creteil, France.
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan.
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13
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Kitagishi H, Kano K. Synthetic heme protein models that function in aqueous solution. Chem Commun (Camb) 2021; 57:148-173. [DOI: 10.1039/d0cc07044k] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Supramolecular porphyrin–cyclodextrin complexes act as biomimetic heme protein models in aqueous solution.
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Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry
- Faculty of Science and Engineering
- Doshisha University
- Kyoto 610-0321
- Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry
- Faculty of Science and Engineering
- Doshisha University
- Kyoto 610-0321
- Japan
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14
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Fan MF, Wang HM, Nan LJ, Wang AJ, Luo X, Yuan PX, Feng JJ. The mimetic assembly of cobalt prot-porphyrin with cyclodextrin dimer and its application for H2O2 detection. Anal Chim Acta 2020; 1097:78-84. [DOI: 10.1016/j.aca.2019.11.002] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 10/28/2019] [Accepted: 11/03/2019] [Indexed: 01/19/2023]
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15
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Prigorchenko E, Ustrnul L, Borovkov V, Aav R. Heterocomponent ternary supramolecular complexes of porphyrins: A review. J PORPHYR PHTHALOCYA 2020. [DOI: 10.1142/s108842461930026x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Porphyrins are prominent host molecules which are widely used due to their structural characteristics and directional interaction sites. This review summarizes non-covalently bound ternary complexes of porphyrins, constructed from at least three non-identical species. Progress in supramolecular chemistry allows the creation of complex molecular machinery tools, such as rotors, motors and switches from relatively simple structures in a single self-assembly step. In the current review, we highlight the collection of sophisticated molecular ensembles including sandwich-type complexes, cages, capsules, tweezers, rotaxanes, and supramolecular architectures mediating oxygen-binding and oxidation reactions. These diverse structures have high potential to be applied in sensing, production of new smart materials as well as in medical science.
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Affiliation(s)
- Elena Prigorchenko
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
| | - Lukas Ustrnul
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
| | - Victor Borovkov
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
- College of Chemistry and Materials Science, South-Central University for Nationalities, 182 Minzu Road, Hongshan, Wuhan 430074, China
| | - Riina Aav
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
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16
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Vonesch M, Wytko JA, Kitagishi H, Kano K, Weiss J. Modelling haemoproteins: porphyrins and cyclodextrins as sources of inspiration. Chem Commun (Camb) 2019; 55:14558-14565. [PMID: 31748764 DOI: 10.1039/c9cc07545c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The association of hydrophobic cavities with porphyrin derivatives has been used to mimic haemoprotein structures. The most employed cavity in this field is β-cyclodextrin (β-CD), and scaffolds combining β-CDs and porphyrins are expected to inspire the combination of porphyrins and cucurbiturils in the near future. Aside from providing water solubility to various porphyrinic structures, the β-CD framework can also modulate and control the reactivity of the metal core of the porphyrin. After a general introduction of the challenges faced in the field of haemoprotein models and the binding behavior of β-CDs, this article will discuss covalent and non-covalent association of porphyrins with β-CDs. In each approach, the role of the CD differs according to the relative position of the concave CD host, either directly controlling the binding and transformation of a substrate on the metalloporphyrin or playing a dual role of controlling the water solubility and selecting the axial ligand of the metal core. The discussion will be of interest to the cucurbituril community as well as to the cavitand community, as the information provided should be useful for the design of haemoprotein mimics using cucurbiturils.
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Affiliation(s)
- Maxime Vonesch
- Institut de Chimie de Strasbourg, UMR 7177 CNRS-Université de Strasbourg, 4 rue Blaise Pascal 67000, Strasbourg, France.
| | - Jennifer A Wytko
- Institut de Chimie de Strasbourg, UMR 7177 CNRS-Université de Strasbourg, 4 rue Blaise Pascal 67000, Strasbourg, France.
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan.
| | - Jean Weiss
- Institut de Chimie de Strasbourg, UMR 7177 CNRS-Université de Strasbourg, 4 rue Blaise Pascal 67000, Strasbourg, France.
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17
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Mavridis IM, Yannakopoulou K. Porphyrinoid-Cyclodextrin Assemblies in Biomedical Research: An Update. J Med Chem 2019; 63:3391-3424. [PMID: 31808344 DOI: 10.1021/acs.jmedchem.9b01069] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Porphyrinoids, well-known cofactors in fundamental processes of life, have stimulated interest as synthetic models of natural systems and integral components of photodynamic therapy, but their utilization is compromised by self-aggregation in aqueous media. The capacity of cyclodextrins to include hydrophobic molecules in their cavity provides porphyrinoids with a protective environment against oxidation and the ability to disperse efficiently in biological fluids. Moreover, engineered cyclodextrin-porphyrinoid assemblies enhance the photodynamic abilities of porphyrinoids, can carry chemotherapeutics for synergistic modalities, and can be enriched with functions including cell recognition, tissue penetration, and imaging. This Perspective includes synthetic porphyrinoid-cyclodextrin models of proteins participating in fundamental processes, such as enzymatic catalysis, respiration, and electron transfer. In addition, since porphyrinoid-cyclodextrin systems comprise third generation photosensitizers, recent developments for their utilization in photomedicine, that is, multimodal therapy for cancer (e.g., PDT, PTT) and antimicrobial treatment, and eventually in biocompatible therapeutic or diagnostic platforms for next-generation nanomedicine and theranostics are discussed.
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Affiliation(s)
- Irene M Mavridis
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research "Demokritos", Patriarchou Gregoriou & 27 Neapoleos Str., Agia Paraskevi, Attiki 15341, Greece
| | - Konstantina Yannakopoulou
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research "Demokritos", Patriarchou Gregoriou & 27 Neapoleos Str., Agia Paraskevi, Attiki 15341, Greece
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18
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Kato M, Kon K, Hirayama J, Yagi I. Host–guest chemistry between cyclodextrin and a hydrogen evolution catalyst cobaloxime. NEW J CHEM 2019. [DOI: 10.1039/c9nj00081j] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the host–guest chemistry between cyclodextrin and a bisdimethylglyoximato cobalt complex, cobaloxime.
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Affiliation(s)
- Masaru Kato
- Section of Environmental Materials Science
- Faculty of Environmental Earth Science
- Hokkaido University
- Sapporo 060-0810
- Japan
| | - Keita Kon
- Division of Environmental Materials Science
- Graduate School of Environmental Science
- Hokkaido University
- Sapporo 060-0810
- Japan
| | - Jun Hirayama
- Division of Environmental Materials Science
- Graduate School of Environmental Science
- Hokkaido University
- Sapporo 060-0810
- Japan
| | - Ichizo Yagi
- Section of Environmental Materials Science
- Faculty of Environmental Earth Science
- Hokkaido University
- Sapporo 060-0810
- Japan
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19
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Optimized synthesis of a per-O-methylated β-cyclodextrin dimer linked at the secondary face by a pyridine ligand. J INCL PHENOM MACRO 2018. [DOI: 10.1007/s10847-018-0839-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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20
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Circadian clock disruption by selective removal of endogenous carbon monoxide. Sci Rep 2018; 8:11996. [PMID: 30097595 PMCID: PMC6086871 DOI: 10.1038/s41598-018-30425-6] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Accepted: 07/30/2018] [Indexed: 11/13/2022] Open
Abstract
Circadian rhythms are regulated by transcription-translation feedback loops (TTFL) of clock genes. Previous studies have demonstrated that core transcriptional factors, NPAS2 and CLOCK, in the TTFL can reversibly bind carbon monoxide (CO) in vitro. However, little is known about whether endogenous CO, which is continuously produced during a heme metabolic process, is involved in the circadian system. Here we show that selective removal of endogenous CO in mice considerably disrupts rhythmic expression of the clock genes. A highly selective CO scavenger, hemoCD1, which is a supramolecular complex of an iron(II)porphyrin with a per-O-methyl-β-cyclodextrin dimer, was used to remove endogenous CO in mice. Intraperitoneal administration of hemoCD1 to mice immediately reduced the amount of internal CO. The removal of CO promoted the bindings of NPAS2 and CLOCK to DNA (E-box) in the murine liver, resulting in up-regulation of the E-box-controlled clock genes (Per1, Per2, Cry1, Cry2, and Rev-erbα). Within 3 h after the administration, most hemoCD1 in mice was excreted in the urine, and heme oxygenase-1 (HO-1) was gradually induced in the liver. Increased endogenous CO production due to the overexpression of HO-1 caused dissociation of NPAS2 and CLOCK from E-box, which in turn induced down-regulation of the clock genes. The down-regulation continued over 12 h even after the internal CO level recovered to normal. The late down-regulation was ascribed to an inflammatory response caused by the endogenous CO reduction. The CO pseudo-knockdown experiments provided the clear evidence that endogenous CO contributes to regulation in the mammalian circadian clock.
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21
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Kitagishi H, Shimoji D, Ohta T, Kamiya R, Kudo Y, Onoda A, Hayashi T, Weiss J, Wytko JA, Kano K. A water-soluble supramolecular complex that mimics the heme/copper hetero-binuclear site of cytochrome c oxidase. Chem Sci 2018; 9:1989-1995. [PMID: 29675246 PMCID: PMC5892347 DOI: 10.1039/c7sc04732k] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Accepted: 01/12/2018] [Indexed: 01/16/2023] Open
Abstract
The O2 adduct of an aqueous synthetic heme/copper model system built on a porphyrin/cyclodextrin supramolecular complex has been characterized.
In mitochondria, cytochrome c oxidase (CcO) catalyses the reduction of oxygen (O2) to water by using a heme/copper hetero-binuclear active site. Here we report a highly efficient supramolecular approach for the construction of a water-soluble biomimetic model for the active site of CcO. A tridentate copper(ii) complex was fixed onto 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinatoiron(iii) (FeIIITPPS) through supramolecular complexation between FeIIITPPS and a per-O-methylated β-cyclodextrin dimer linked by a (2,2′:6′,2′′-terpyridyl)copper(ii) complex (CuIITerpyCD2). The reduced FeIITPPS/CuITerpyCD2 complex reacted with O2 in an aqueous solution at pH 7 and 25 °C to form a superoxo-type FeIII–O2–/CuI complex in a manner similar to CcO. The pH-dependent autoxidation of the O2 complex suggests that water molecules gathered at the distal Cu site are possibly involved in the FeIII–O2–/CuI superoxo complex in an aqueous solution. Electrochemical analysis using a rotating disk electrode demonstrated the role of the FeTPPS/CuTerpyCD2 hetero-binuclear structure in the catalytic O2 reduction reaction.
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Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Daiki Shimoji
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Takehiro Ohta
- Picobiology Institute , Graduate School of Life Science , University of Hyogo , RSC-UH LP Center , Hyogo 679-5148 , Japan
| | - Ryo Kamiya
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Yasuhiro Kudo
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Akira Onoda
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , 2-1 Yamadaoka , Suita 565-0871 , Japan
| | - Takashi Hayashi
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , 2-1 Yamadaoka , Suita 565-0871 , Japan
| | - Jean Weiss
- Institut de Chimie de Strasbourg , UMR 7177 , CNRS , Université de Strasbourg , 4 Rue Blaise Pascal , 67000 Strasbourg , France
| | - Jennifer A Wytko
- Institut de Chimie de Strasbourg , UMR 7177 , CNRS , Université de Strasbourg , 4 Rue Blaise Pascal , 67000 Strasbourg , France
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
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22
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Minegishi S, Yumura A, Miyoshi H, Negi S, Taketani S, Motterlini R, Foresti R, Kano K, Kitagishi H. Detection and Removal of Endogenous Carbon Monoxide by Selective and Cell-Permeable Hemoprotein Model Complexes. J Am Chem Soc 2017; 139:5984-5991. [PMID: 28388069 DOI: 10.1021/jacs.7b02229] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Carbon monoxide (CO) is produced in mammalian cells during heme metabolism and serves as an important signaling messenger. Here we report the bioactive properties of selective CO scavengers, hemoCD1 and its derivative R8-hemoCD1, which have the ability to detect and remove endogenous CO in cells. HemoCD1 is a supramolecular hemoprotein-model complex composed of 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinatoiron(II) and a per-O-methylated β-cyclodextrin dimer having an pyridine linker. We demonstrate that hemoCD1 can be used effectively to quantify endogenous CO in cell lysates by a simple spectrophotometric method. The hemoCD1 assay detected ca. 260 pmol of CO in 106 hepatocytes, which was well-correlated with the amount of intracellular bilirubin, the final breakdown product of heme metabolism. We then covalently attached an octaarginine peptide to a maleimide-appended hemoCD1 to synthesize R8-hemoCD1, a cell-permeable CO scavenger. Indeed, R8-hemoCD1 was taken up by intact cells and captured intracellular CO with high efficiency. Moreover, we revealed that removal of endogenous CO by R8-hemoCD1 in cultured macrophages led to a significant increase (ca. 2.5-fold) in reactive oxygen species production and exacerbation of inflammation after challenge with lipopolysaccharide. Thus, R8-hemoCD1 represents a powerful expedient for exploring specific and still unidentified biological functions of CO in cells.
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Affiliation(s)
- Saika Minegishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University , Kyotanabe, Kyoto 610-0321, Japan
| | - Aki Yumura
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University , Kyotanabe, Kyoto 610-0321, Japan
| | - Hirotsuna Miyoshi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University , Kyotanabe, Kyoto 610-0321, Japan
| | - Shigeru Negi
- Faculty of Pharmaceutical Sciences, Doshisha Women's College of Liberal Arts , Kyotanabe, Kyoto 610-0395, Japan
| | - Shigeru Taketani
- Department of Microbiology, Kansai Medical University , Hirakata, Osaka 573-1010, Japan
| | - Roberto Motterlini
- Inserm U955 , Team 12, Créteil 94000, France.,Université Paris Est , Faculty of Medicine, Créteil 94000, France
| | - Roberta Foresti
- Inserm U955 , Team 12, Créteil 94000, France.,Université Paris Est , Faculty of Medicine, Créteil 94000, France
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University , Kyotanabe, Kyoto 610-0321, Japan
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University , Kyotanabe, Kyoto 610-0321, Japan
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23
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Kitagishi H, Mao Q, Kitamura N, Kita T. HemoCD as a Totally Synthetic Artificial Oxygen Carrier: Improvements in the Synthesis and O 2 /CO Discrimination. Artif Organs 2017; 41:372-380. [PMID: 28326558 DOI: 10.1111/aor.12870] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2016] [Revised: 08/09/2016] [Accepted: 08/26/2016] [Indexed: 12/17/2022]
Abstract
HemoCD, which is composed of an iron(II)porphyrin such as 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinatoiron(II) (Fe(II)TPPS) and a cyclodextrin (CD) dimer having a pyridine linker, represents a synthetic hemoglobin (Hb) model compound that exhibits reversible oxygen (O2 ) binding ability in aqueous solution at an ambient temperature. Therefore, hemoCD has the potential to be used as a totally synthetic artificial oxygen carrier. In this article, we describe the improvements of hemoCD related to its synthesis and O2 /CO selectivity. The synthesis procedure of the CD dimer of hemoCD was re-examined, and the CD dimer was successively synthesized from inexpensive β-CD with a 38% yield (three-steps), which enabled us to obtain the CD dimer in gram-quantities. The O2 /CO selectivity of hemoCD was also markedly improved using an iron(II)porphyrin having a carboxylate group at the distal site of hemoCD.
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Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
| | - Qiyue Mao
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
| | - Naoya Kitamura
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
| | - Takahiro Kita
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, Japan
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24
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Kitagishi H, Minegishi S. Iron(II)porphyrin–Cyclodextrin Supramolecular Complex as a Carbon Monoxide-Depleting Agent in Living Organisms. Chem Pharm Bull (Tokyo) 2017; 65:336-340. [DOI: 10.1248/cpb.c16-00767] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
| | - Saika Minegishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
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25
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Kitagishi H, Kurosawa S, Kano K. Intramolecular OxidativeO-Demethylation of an Oxoferryl Porphyrin Complexed with a Per-O-methylated β-Cyclodextrin Dimer. Chem Asian J 2016; 11:3213-3219. [DOI: 10.1002/asia.201601097] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Indexed: 11/12/2022]
Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular; Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani Kyotanabe Kyoto 610-0321 Japan
| | - Shun Kurosawa
- Department of Molecular; Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani Kyotanabe Kyoto 610-0321 Japan
| | - Koji Kano
- Department of Molecular; Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani Kyotanabe Kyoto 610-0321 Japan
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26
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Liu G, Xu X, Chen Y, Wu X, Wu H, Liu Y. A highly efficient supramolecular photoswitch for singlet oxygen generation in water. Chem Commun (Camb) 2016; 52:7966-9. [PMID: 27251874 DOI: 10.1039/c6cc02996e] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of water-soluble supramolecular assemblies were constructed from dithienylethene-modified permethyl-β-cyclodextrins and porphyrin derivatives, accompanied by a high FRET efficiency, and could be applied in the control of singlet oxygen generation in a 1% ethanol aqueous solution upon irradiation of different wavelength light. These findings will provide a feasible and convenient way to construct a potential photodynamic therapy material.
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Affiliation(s)
- Guoxing Liu
- Department of Chemistry, State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, P. R. China
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27
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Kitagishi H, Minegishi S, Yumura A, Negi S, Taketani S, Amagase Y, Mizukawa Y, Urushidani T, Sugiura Y, Kano K. Feedback Response to Selective Depletion of Endogenous Carbon Monoxide in the Blood. J Am Chem Soc 2016; 138:5417-25. [DOI: 10.1021/jacs.6b02211] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry,
Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Saika Minegishi
- Department of Molecular Chemistry and Biochemistry,
Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Aki Yumura
- Department of Molecular Chemistry and Biochemistry,
Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Shigeru Negi
- Faculty
of Pharmaceutical Sciences, Doshisha Women’s College of Liberal Arts, Kyotanabe,
Kyoto 610-0395, Japan
| | - Shigeru Taketani
- Department of Microbiology, Kansai Medical University, Hirakata, Osaka 573-1010, Japan
| | - Yoko Amagase
- Faculty
of Pharmaceutical Sciences, Doshisha Women’s College of Liberal Arts, Kyotanabe,
Kyoto 610-0395, Japan
| | - Yumiko Mizukawa
- Faculty
of Pharmaceutical Sciences, Doshisha Women’s College of Liberal Arts, Kyotanabe,
Kyoto 610-0395, Japan
| | - Tetsuro Urushidani
- Faculty
of Pharmaceutical Sciences, Doshisha Women’s College of Liberal Arts, Kyotanabe,
Kyoto 610-0395, Japan
| | - Yukio Sugiura
- Faculty
of Pharmaceutical Sciences, Doshisha Women’s College of Liberal Arts, Kyotanabe,
Kyoto 610-0395, Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry,
Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
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28
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Imabeppu K, Kuwano H, Yutani E, Kitagishi H, Kano K. Photoinduced Homolysis of Alkyl–Cobalt(III) Bonds in a Cyclodextrin Cage. Eur J Inorg Chem 2016. [DOI: 10.1002/ejic.201600208] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Kohei Imabeppu
- Department of Molecular Chemistry and Biochemistry, Doshisha University Kyotanabe, Kyoto 610‐0321, Japan, http://www1.doshisha.ac.jp/~kkano/
| | - Hiroyuki Kuwano
- Department of Molecular Chemistry and Biochemistry, Doshisha University Kyotanabe, Kyoto 610‐0321, Japan, http://www1.doshisha.ac.jp/~kkano/
| | - Eriko Yutani
- Department of Molecular Chemistry and Biochemistry, Doshisha University Kyotanabe, Kyoto 610‐0321, Japan, http://www1.doshisha.ac.jp/~kkano/
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Doshisha University Kyotanabe, Kyoto 610‐0321, Japan, http://www1.doshisha.ac.jp/~kkano/
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Doshisha University Kyotanabe, Kyoto 610‐0321, Japan, http://www1.doshisha.ac.jp/~kkano/
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29
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Kryjewski M, Goslinski T, Mielcarek J. Functionality stored in the structures of cyclodextrin–porphyrinoid systems. Coord Chem Rev 2015. [DOI: 10.1016/j.ccr.2015.04.009] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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30
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Kitagishi H, Kawasaki H, Kano K. Bioconjugation of Serum Albumin to a Maleimide-appended Porphyrin/Cyclodextrin Supramolecular Complex as an Artificial Oxygen Carrier in the Bloodstream. Chem Asian J 2015; 10:1768-75. [DOI: 10.1002/asia.201500451] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Indexed: 12/17/2022]
Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani, Kyotanabe Kyoto 610-0321 Japan
| | - Hiroki Kawasaki
- Department of Molecular Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani, Kyotanabe Kyoto 610-0321 Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry; Faculty of Science and Engineering; Doshisha University; 1-3 Tatara Miyakodani, Kyotanabe Kyoto 610-0321 Japan
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31
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Lohse M, von Krbek LKS, Radunz S, Moorthy S, Schalley CA, Hecht S. Discrete multiporphyrin pseudorotaxane assemblies from di- and tetravalent porphyrin building blocks. Beilstein J Org Chem 2015; 11:748-62. [PMID: 26124877 PMCID: PMC4464431 DOI: 10.3762/bjoc.11.85] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Accepted: 04/29/2015] [Indexed: 12/26/2022] Open
Abstract
Two pairs of divalent and tetravalent porphyrin building blocks carrying the complementary supramolecular crown ether/secondary ammonium ion binding motif have been synthesized and their derived pseudorotaxanes have been studied by a combination of NMR spectroscopy in solution and ESI mass spectrometry in the gas phase. By simple mixing of the components the formation of discrete dimeric and trimeric (metallo)porphyrin complexes predominates, in accordance to binding stoichiometry, while the amount of alternative structures can be neglected. Our results illustrate the power of multivalency to program the multicomponent self-assembly of specific entities into discrete functional nanostructures.
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Affiliation(s)
- Mirko Lohse
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany. ; Tel: +49 (0)30 2093-7308
| | - Larissa K S von Krbek
- Institut für Chemie und Biochemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany. ; Tel: +49(0)308385-2639
| | - Sebastian Radunz
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany. ; Tel: +49 (0)30 2093-7308
| | - Suresh Moorthy
- Institut für Chemie und Biochemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany. ; Tel: +49(0)308385-2639
| | - Christoph A Schalley
- Institut für Chemie und Biochemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany. ; Tel: +49(0)308385-2639
| | - Stefan Hecht
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany. ; Tel: +49 (0)30 2093-7308
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32
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Sun HL, Chen Y, Zhao J, Liu Y. Photocontrolled Reversible Conversion of Nanotube and Nanoparticle Mediated by β-Cyclodextrin Dimers. Angew Chem Int Ed Engl 2015; 54:9376-80. [DOI: 10.1002/anie.201503614] [Citation(s) in RCA: 96] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Revised: 05/18/2015] [Indexed: 12/12/2022]
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33
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Sun HL, Chen Y, Zhao J, Liu Y. Photocontrolled Reversible Conversion of Nanotube and Nanoparticle Mediated by β-Cyclodextrin Dimers. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503614] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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34
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Sansiaume-Dagousset E, Urvoas A, Chelly K, Ghattas W, Maréchal JD, Mahy JP, Ricoux R. Neocarzinostatin-based hybrid biocatalysts for oxidation reactions. Dalton Trans 2015; 43:8344-54. [PMID: 24728274 DOI: 10.1039/c4dt00151f] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
An anionic iron(III)-porphyrin-testosterone conjugate 1-Fe has been synthesized and fully characterized. It has been further associated with a neocarzinostatin variant, NCS-3.24, to generate a new artificial metalloenzyme following the so-called 'Trojan Horse' strategy. This new 1-Fe-NCS-3.24 biocatalyst showed an interesting catalytic activity as it was found able to catalyze the chemoselective and slightly enantioselective (ee = 13%) sulfoxidation of thioanisole by H2O2. Molecular modelling studies show that a synergy between the binding of the steroid moiety and that of the porphyrin macrocycle into the protein binding site can explain the experimental results, indicating a better affinity of 1-Fe for the NCS-3.24 variant than testosterone and testosterone-hemisuccinate themselves. They also show that the Fe-porphyrin complex is sandwiched between the two subdomains of the protein providing with good complementarities. However, the artificial cofactor entirely fills the cavity and its metal ion remains widely exposed to the solvent which explains the moderate enantioselectivity observed. Some possible improvements in the "Trojan Horse" strategy for obtaining better catalysts of selective oxidations are presented.
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Affiliation(s)
- Elodie Sansiaume-Dagousset
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
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35
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Mahy JP, Maréchal JD, Ricoux R. Various strategies for obtaining oxidative artificial hemoproteins with a catalytic oxidative activity: from "Hemoabzymes" to "Hemozymes"? J PORPHYR PHTHALOCYA 2015. [DOI: 10.1142/s1088424614500813] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The design of artificial hemoproteins that could lead to new biocatalysts for selective oxidation reactions using clean oxidants such as O 2 or H 2 O 2 under ecocompatible conditions constitutes a really promising challenge for a wide range of industrial applications. In vivo, such reactions are performed by heme-thiolate proteins, cytochromes P450, that catalyze the oxidation of drugs by dioxygen in the presence of electrons delivered from NADPH by cytochrome P450 reductase. Several strategies were used to design new artificial hemoproteins to mimic these enzymes, that associate synthetic metalloporphyrin derivatives to a protein that is supposed to induce a selectivity in the catalyzed reaction. A first generation of artificial hemoproteins or "hemoabzymes" was obtained by the non-covalent association of synthetic hemes such as N-methyl-mesoporphyrin IX, Fe(III) -α3β-tetra-o-carboxyphenylporphyrin or microperoxidase 8 with monoclonal antibodies raised against these cofactors. The obtained antibody-metalloporphyrin complexes displayed a peroxidase activity and some of them catalyzed the regio-selective nitration of phenols by H 2 O 2/ NO 2 and the stereo-selective oxidation of sulphides by H 2 O 2. A second generation of artificial hemoproteins or "hemozymes", was obtained by the non-covalent association of non-relevant proteins with metalloporphyrin derivatives. Several strategies were used, the most successful of which, named "host-guest" strategy involved the non-covalent incorporation of metalloporphyrin derivatives into easily affordable proteins. The artificial hemoproteins obtained were found to be able to perform efficiently the stereoselective oxidation of organic compounds such as sulphides and alkenes by H 2 O 2 and KHSO 5.
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Affiliation(s)
- Jean-Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie, Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Jean-Didier Maréchal
- Departament de Química, Universitat Autònoma de Barcelona, Edifici C.n., 08193 Cerdonyola del Vallès, Barcelona, Spain
| | - Rémy Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie, Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
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Mahy JP, Maréchal JD, Ricoux R. From “hemoabzymes” to “hemozymes”: towards new biocatalysts for selective oxidations. Chem Commun (Camb) 2015; 51:2476-94. [DOI: 10.1039/c4cc08169b] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Two generations of artificial hemoproteins have been obtained: “hemoabzymes”, by non-covalent association of synthetic hemes with monoclonal antibodies raised against these cofactors and “hemozymes”, by non-covalent association of non-relevant proteins with metalloporphyrin derivatives. A review of the different strategies employed as well as their structural and catalytic properties is presented here.
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Affiliation(s)
- J.-P. Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay
- UMR 8182 CNRS
- Laboratoire de Chimie Bioorganique et Bioinorganique
- 91435 Orsay Cedex
- France
| | - J.-D. Maréchal
- Departament de Química
- Universitat Autònoma de Barcelona
- Barcelona
- Spain
| | - R. Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay
- UMR 8182 CNRS
- Laboratoire de Chimie Bioorganique et Bioinorganique
- 91435 Orsay Cedex
- France
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37
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Bistri O, Reinaud O. Supramolecular control of transition metal complexes in water by a hydrophobic cavity: a bio-inspired strategy. Org Biomol Chem 2015; 13:2849-65. [DOI: 10.1039/c4ob02511c] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Different strategies for obtaining water-soluble cavity-appended metal complexes are described, and their resulting interlocked assets are discussed in relationship with the very specific properties of water as a solvent.
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Affiliation(s)
- Olivia Bistri
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris, France
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris, France
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38
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Rebilly JN, Colasson B, Bistri O, Over D, Reinaud O. Biomimetic cavity-based metal complexes. Chem Soc Rev 2015; 44:467-89. [DOI: 10.1039/c4cs00211c] [Citation(s) in RCA: 137] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The biomimetic association of a metal ion with a cavity allows selective recognition, unusual redox properties and new reactivity patterns.
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Benoit Colasson
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Bistri
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Diana Over
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
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39
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Watanabe K, Suzuki T, Kitagishi H, Kano K. Reaction between a haemoglobin model compound and hydrosulphide in aqueous solution. Chem Commun (Camb) 2015; 51:4059-61. [DOI: 10.1039/c5cc00057b] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The reaction between hydrosulphide and a haemoglobin model compound, composed of a Fe(iii)-porphyrin and a cyclodextrin dimer possessing a pyridine-linker, was studied.
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Affiliation(s)
- Kenji Watanabe
- Graduate School of Pharmaceutical Sciences
- Kyushu University
- Fukuoka 812-8582
- Japan
| | - Toshikane Suzuki
- Department of Molecular Chemistry and Biochemistry
- Faculty of Science and Engineering
- Doshisha University
- Kyotanabe
- Japan
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry
- Faculty of Science and Engineering
- Doshisha University
- Kyotanabe
- Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry
- Faculty of Science and Engineering
- Doshisha University
- Kyotanabe
- Japan
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40
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Yang Y, Zhang YM, Zhang Y, Xu X, Liu Y. Synthesis and Photophysical Behavior of a Supramolecular Nanowire made from Dithienylethene-Bridged Bis(permethyl-β-cyclodextrin)s and Porphyrins. Chem Asian J 2014; 10:84-90. [DOI: 10.1002/asia.201402802] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2014] [Indexed: 11/10/2022]
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Kitagishi H, Minami K, Kano K. Intracellular Delivery of Anionic meso-Tetraarylporphyrin–Per-O-methylated β-Cyclodextrin Supramolecular Complexes by an Oligoarginine Carrier Peptide. CHEM LETT 2014. [DOI: 10.1246/cl.140298] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
| | - Keiko Minami
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
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42
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Urvoas A, Ghattas W, Maréchal JD, Avenier F, Bellande F, Mao W, Ricoux R, Mahy JP. Neocarzinostatin-based hybrid biocatalysts with a RNase like activity. Bioorg Med Chem 2014; 22:5678-86. [PMID: 24984934 DOI: 10.1016/j.bmc.2014.05.063] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2014] [Revised: 05/24/2014] [Accepted: 05/28/2014] [Indexed: 11/16/2022]
Abstract
A new zinc(II)-cofactor coupled to a testosterone anchor, zinc(II)-N,N-bis(2-pyridylmethyl)-1,3-diamino-propa-2-ol-N'(17'-succinimidyltestosterone) (Zn-Testo-BisPyPol) 1-Zn has been synthesized and fully characterized. It has been further associated with a neocarzinostatin variant, NCS-3.24, to generate a new artificial metalloenzyme following the so-called 'Trojan horse' strategy. This new 1-Zn-NCS-3.24 biocatalyst showed an interesting catalytic activity as it was found able to catalyze the hydrolysis of the RNA model HPNP with a good catalytic efficiency (kcat/KM=13.6M(-1)s(-1) at pH 7) that places it among the best artificial catalysts for this reaction. Molecular modeling studies showed that a synergy between the binding of the steroid moiety and that of the BisPyPol into the protein binding site can explain the experimental results, indicating a better affinity of 1-Zn for the NCS-3.24 variant than testosterone and testosterone-hemisuccinate themselves. They also show that the artificial cofactor entirely fills the cavity, the testosterone part of 1-Zn being bound to one the two subdomains of the protein providing with good complementarities whereas its metal ion remains widely exposed to the solvent which made it a valuable tool for the catalysis of hydrolysis reactions, such as that of HPNP. Some possible improvements in the 'Trojan horse' strategy for obtaining better catalysts of selective reactions will be further studied.
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Affiliation(s)
- Agathe Urvoas
- Institut de Biochimie et de Biophysique Moléculaire et Cellulaire, UMR 8619 CNRS, Laboratoire de Modélisation et d'Ingénierie des Protéines, Bât. 430, Université Paris XI, 91405 Orsay Cedex, France
| | - Wadih Ghattas
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Jean-Didier Maréchal
- Departament de Química, Universitat Autònoma de Barcelona, Edifici C.n., Cerdonyola del Vallès, 08193 Barcelona, Spain
| | - Frédéric Avenier
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Felix Bellande
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Wei Mao
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Rémy Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
| | - Jean-Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
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43
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Ueda T, Kitagishi H, Kano K. Intramolecular Direct Oxygen Transfer from Oxoferryl Porphyrin to a Sulfide Bond. Inorg Chem 2013; 53:543-51. [DOI: 10.1021/ic4026393] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Takunori Ueda
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
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44
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Watanabe K, Kitagishi H, Kano K. Supramolecular Iron Porphyrin/Cyclodextrin Dimer Complex that Mimics the Functions of Hemoglobin and Methemoglobin. Angew Chem Int Ed Engl 2013; 52:6894-7. [DOI: 10.1002/anie.201302470] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2013] [Revised: 04/22/2013] [Indexed: 11/12/2022]
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45
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Watanabe K, Kitagishi H, Kano K. Supramolecular Iron Porphyrin/Cyclodextrin Dimer Complex that Mimics the Functions of Hemoglobin and Methemoglobin. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201302470] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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46
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Karasugi K, Kitagishi H, Kano K. Elongation of Circulation Time of a Diatomic Molecule Receptor in Bloodstream by Attachment to Small Gold Nanoparticles. CHEM LETT 2013. [DOI: 10.1246/cl.2013.115] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Keiichi Karasugi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
| | - Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University
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47
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Zhao M, Wang HB, Ji LN, Mao ZW. Insights into metalloenzyme microenvironments: biomimetic metal complexes with a functional second coordination sphere. Chem Soc Rev 2013; 42:8360-75. [DOI: 10.1039/c3cs60162e] [Citation(s) in RCA: 149] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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48
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Karasugi K, Kitagishi H, Kano K. Modification of a dioxygen carrier, hemoCD, with PEGylated dendrons for extension of circulation time in the bloodstream. Bioconjug Chem 2012; 23:2365-76. [PMID: 23136812 DOI: 10.1021/bc300303z] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
A supramolecular diatomic receptor, hemoCD, was modified with PEGylated dendrons to extend its circulation time in the bloodstream. The core component was 4-oxo-4-[[4-(10,15,20-tris(4-sulfonatophenyl)-21H,23H-porphin-5-yl)phenyl]amino]butanoic acid (Por-COOH). The building block of the dendrons was Fmoc-4-amino-4-(2-carboxyethyl)heptanedioic acid (FmocTA), which was condensed with α-amino-ω-methoxy-poly(ethylene glycol) (PEG(5000)-NH(2)) to yield an FmocG1-dendron. After deprotection, the G1-dendron was condensed with Por-COOH to yield G1-Por. A precursor (FmocNA) of an FmocG2-dendron was prepared via a condensation reaction of 4-amino-4-(2-t-butoxycarbonylethyl)heptanedioic acid di-t-butyl ester (TA-E) with FmocTA followed by hydrolysis of the resultant nona-carboxylic acid nona-t-butyl ester. Condensation of FmocNA with PEG(5000)-NH(2) yielded an FmocG2-dendron. After deprotection, the G2-dendron was condensed with Por-COOH to yield G2-Por. The ferrous complexes of G1- and G2-Pors formed stable 1:1 inclusion complexes with Py3CD, a per-O-methylated β-cyclodextrin dimer with a pyridine linker, in aqueous solution yielding supramolecular complexes designated as G1-hemoCD and G2-hemoCD, respectively. Both G1- and G2-hemoCDs bound molecular oxygen, with the O(2) affinities (P(1/2)) of hemoCD, G1-, and G2-hemoCDs at pH 7.4 and 37 °C being 22, 20, and 20 Torr, respectively. The modification of hemoCD with the dendrons did not cause destabilization of the O(2) adducts via autoxidation, as indicated by their half-lives (t(1/2)) of 6.8, 6.1, and 5.5 h for hemoCD, G1-, and G2-hemoCDs, respectively. The blood concentration-time curves of G1- and G2-hemoCDs injected into the bloodstream of rats exhibited two phases, with the half-lives of the fast and slow decays being 0.45 and 5.3 h, respectively, for G1-hemoCD, and 0.20 and 12.8 h, respectively, for G2-hemoCD. The half-lives of hemoCD were 0.02 and 0.50 h, respectively. The circulation time of hemoCD was markedly extended by its modification with the PEGylated dendrons, which was very effective in protecting hemoCD against opsonization for uptake by the reticuloendothelial system.
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Affiliation(s)
- Keiichi Karasugi
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
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Vinodh M, Alipour FH, Mohamod AA, Al-Azemi TF. Molecular assemblies of porphyrins and macrocyclic receptors: recent developments in their synthesis and applications. Molecules 2012; 17:11763-99. [PMID: 23047480 PMCID: PMC6268645 DOI: 10.3390/molecules171011763] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2012] [Revised: 09/08/2012] [Accepted: 09/11/2012] [Indexed: 11/17/2022] Open
Abstract
Metalloporphyrins which form the core of many bioenzymes and natural light harvesting or electron transport systems, exhibit a variety of selective functional properties depending on the state and surroundings with which they exist in biological systems. The specificity and ease with which they function in each of their bio-functions appear to be largely governed by the nature and disposition of the protein globule around the porphyrin reaction center. Synthetic porphyrin frameworks confined within or around a pre-organized molecular entity like the protein network in natural systems have attracted considerable attraction, especially in the field of biomimetic reactions. At the same time a large number of macrocyclic oligomers such as calixarenes, resorcinarenes, spherands, cyclodextrins and crown ethers have been investigated in detail as efficient molecular receptors. These molecular receptors are synthetic host molecules with enclosed interiors, which are designed three dimensionally to ensure strong and precise molecular encapsulation/recognition. Due to their complex structures, enclosed guest molecules reside in an environment isolated from the outside and as a consequence, physical properties and chemical reactions specific to that environment in these guest species can be identified. The facile incorporation of such molecular receptors into the highly photoactive and catalytically efficient porphyrin framework allows for convenient design of useful molecular systems with unique structural and functional properties. Such systems have provided over the years attractive model systems for the study of various biological and chemical processes, and the design of new materials and molecular devices. This review focuses on the recent developments in the synthesis of porphyrin assemblies associated with cyclodextrins, calixarenes and resorcinarenes and their potential applications in the fields of molecular encapsulation/recognition, and chemical catalysis.
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Affiliation(s)
| | | | | | - Talal F. Al-Azemi
- Chemistry Department, Kuwait University, P.O. Box 5969, Safat 13060, Kuwait
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50
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Thiabaud G, Brugnara A, Carboni M, Le Poul N, Colasson B, Le Mest Y, Reinaud O. Synthesis and Studies of a Water-Soluble and Air-Stable CuI/CuII Open-Shell Funnel Complex. Org Lett 2012; 14:2500-3. [DOI: 10.1021/ol3007875] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Grégory Thiabaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Andrea Brugnara
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Michael Carboni
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Nicolas Le Poul
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Benoît Colasson
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Yves Le Mest
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France, and Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, CNRS UMR 6521, Université Européenne de Bretagne à Brest, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
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