Kinetic Strategies for the Formation of Graphyne Nanowires via Sonogashira Coupling on Ag(111)

Revealing the Influence of Molecular Chemisorption Direction on the Reaction Selectivity of Dehalogenative Coupling on Au(111): Polymerization versus Cyclization

The control of reaction selectivity is of great interest in chemistry and depends crucially on the revelation of key influencing factors. Based on well-defined molecule-substrate model systems, various influencing factors have been elucidated, focusing primarily on the molecular precursors and the underlying substrates themselves, while interfacial properties have recently been shown to be essential as well. However, the influence of molecular chemisorption direction on reaction selectivity, as a subtle interplay between molecules and underlying substrates, remains elusive. In this work, by a combination of scanning tunneling microscopy imaging and density functional theory calculations, we report the influence of molecular chemisorption direction on the reaction selectivity of two types of dehalogenative coupling on Au(111), i.e., polymerization and cyclization, at the atomic level. The diffusion step of a reactive dehalogenated intermediate in two different chemisorption directions was theoretically revealed to be the key to determining the corresponding reaction selectivity. Our results highlight the important role of molecular chemisorption directions in regulating the on-surface dehalogenative coupling reaction pathways and products, which provides fundamental insights into the control of reaction selectivity by exploiting some subtle interfacial parameters in on-surface reactions for the fabrication of target low-dimensional carbon nanostructures.

On-Surface Synthesis of Polyene-Linked Porphyrin Cooligomer

π-Conjugated molecules are viewed as fundamental components in forthcoming molecular nanoelectronics in which semiconducting functional units are linked to each other via metallic molecular wires. However, it is still challenging to construct such block cooligomers on the surface. Here, we present a synthesis of [18]-polyene-linked Zn-porphyrin cooligomers via a two-step reaction of the alkyl groups on Cu(111) and Cu(110). Nonyl groups (-C9H19) substituted at the 5,15-meso positions of Zn-porphyrin were first transformed to alkenyl groups (-C9H10) by dehydrogenation. Subsequently, homocoupling of the terminal -CH2 groups resulted in the formation of extended [18]-polyene-linked porphyrin cooligomers. The structures of the products at each reaction step were investigated by bond-resolved scanning tunneling microscopy at low temperatures. A combination of angle-resolved photoemission spectroscopy and density functional theory calculations revealed the metallic property of the all trans [18]-polyene linker on Cu(110). This finding may provide an approach to fabricate complex nanocarbon structures on the surface.

On-Surface Synthesis of Silole and Disila-Cyclooctene Derivatives

The incorporation of Si atoms into organic compounds significantly increases a variety of functionality, facilitating further applications. Recently, on-surface synthesis was introduced into organosilicon chemistry as 1,4-disilabenzene bridged nanostructures were obtained via coupling between silicon atoms and brominated phenyl groups at the ortho position on Au(111). Here, we demonstrate a high generality of this strategy via syntheses of silole derivatives and nanoribbon structures with eight-membered sila-cyclic rings from dibrominated molecules at the bay and peri positions on Au(111), respectively. Their structures and electronic properties were investigated by a combination of scanning tunneling microscopy/spectroscopy and density functional theory calculations. This work demonstrates a great potential to deal with heavy group 14 elements in on-surface silicon chemistry.

Silver Surface-Assisted Dehydrobrominative Cross-Coupling between Identical Aryl Bromides

Cross-coupling reactions represent an indispensable tool in chemical synthesis. An intriguing challenge in this field is to achieve selective cross-coupling between two precursors with similar reactivity or, to the limit, the identical molecules. Here we report an unexpected dehydrobrominative cross-coupling between 1,3,5-tris(2-bromophenyl)benzene molecules on silver surfaces. Using scanning tunneling microscopy, we examine the reaction process at the single-molecular level, quantify the selectivity of the dehydrobrominative cross-coupling, and reveal the modulation of selectivity by substrate lattice-related catalytic activity or molecular assembly effect. Theoretical calculations indicate that the dehydrobrominative cross-coupling proceeds via regioselective C-H bond activation of debrominated TBPB and subsequent highly selective C-C coupling of the radical-based intermediates. The reaction kinetics plays an important role in the selectivity for the cross-coupling. This work not only expands the toolbox for chemical synthesis but also provides important mechanistic insights into the selectivity of coupling reactions on the surface.

On-surface synthesis of two types of cyano-substituted polyfluorene derivatives via Ullmann coupling on Au(111)

Using 4-(3,6-dibromo-9H-carbazol-9-yl)benzonitrile (DBCB) precursors, we successfully constructed two types of cyano-substituted polymers on Au(111) by the molecular beam epitaxy method. According to the geometry, the two polymers are referred to as w-type polymers composed of cis-dimers and z-type polymers composed of trans-dimers. The intermediate dimers and final polymers were well characterized by high-resolution scanning tunneling microscopy (HR-STM). Moreover, the productivities of these two polymers can be controlled by adjusting the heating rate and different treatment methods. High heating rates and hot deposition can provide more ample space and time for molecular diffusion, which is conducive to the formation of w-type polymers with relatively low density. In addition, by combining scanning tunneling spectroscopy (STS) and density functional theory (DFT) calculations, we have shown that the addition of CN groups reduces the band gap of the two polymers. Our investigation thus shows the controllable construction of nanostructures through efficient surface synthesis parameters and reveals the potential of using functional groups as tools to modify the electronic properties of polymers.

Dramatic Acceleration of the Hopf Cyclization on Gold(111): From Enediynes to Peri-Fused Diindenochrysene Graphene Nanoribbons

Hopf et al. reported the high-temperature 6π-electrocyclization of cis-hexa-1,3-diene-5-yne to benzene in 1969. Subsequent studies using this cyclization have been limited by its very high reaction barrier. Here, we show that the reaction barrier for two model systems, (E)-1,3,4,6-tetraphenyl-3-hexene-1,5-diyne (1a) and (E)-3,4-bis(4-iodophenyl)-1,6-diphenyl-3-hexene-1,5-diyne (1b), is decreased by nearly half on a Au(111) surface. We have used scanning tunneling microscopy (STM) and noncontact atomic force microscopy (nc-AFM) to monitor the Hopf cyclization of enediynes 1a,b on Au(111). Enediyne 1a undergoes two sequential, quantitative Hopf cyclizations, first to naphthalene derivative 2, and finally to chrysene 3. Density functional theory (DFT) calculations reveal that a gold atom from the Au(111) surface is involved in all steps of this reaction and that it is crucial to lowering the reaction barrier. Our findings have important implications for the synthesis of novel graphene nanoribbons. Ullmann-like coupling of enediyne 1b at 20 °C on Au(111), followed by a series of Hopf cyclizations and aromatization reactions at higher temperatures, produces nanoribbons 12 and 13. These results show for the first time that graphene nanoribbons can be synthesized on a Au(111) surface using the Hopf cyclization mechanism.

Surface-confined alternating copolymerization with molecular precision by stoichiometric control

Keen desires for artificial mimicry of biological polymers and property improvement of synthesized ones have triggered intensive explorations for sequence-controlled copolymerization. However, conventional synthesis faces great challenges to achieve this goal due to the strict requirements on reaction kinetics of comonomer pairs and tedious synthetic processes. Here, sequence-controlled alternating copolymerization with molecular precision is realized on surface. The stoichiometric control serves as a thermodynamic strategy to steer the polymerization selectivity, which enables the selective alternating organometallic copolymerization via intermolecular metalation of 4,4"-dibromo-p-terphenyl (P-Br) and 2,5-diethynyl-1,4-bis(phenylethynyl)benzene (A-H) with Ag adatoms on Ag(111) at P-Br: A-H = 2, as verified by scanning tunneling microscopy and density functional theory studies. In contrast, homopolymerization yield increases as the stoichiometric ratio deviates from 2. The microscopic characterizations rationalize the mechanism, providing a delicate explanation of the stoichiometry-dependent polymerization. These findings pave a way to actualizing an efficient sequence control of copolymerization by surface chemistry.

Synthesis of a Porous [14]Annulene Graphene Nanoribbon and a Porous [30]Annulene Graphene Nanosheet on Metal Surfaces

The electrical and mechanical properties of graphene-based materials can be tuned by the introduction of nanopores, which are sensitively related to the size, morphology, density, and location of nanopores. The synthesis of low-dimensional graphene nanostructures containing well-defined nonplanar nanopores has been challenging due to the intrinsic steric hindrance. Herein, we report the selective synthesis of one-dimensional (1D) graphene nanoribbons (GNRs) containing periodic nonplanar [14]annulene pores on Ag(111) and two-dimensional (2D) porous graphene nanosheet containing periodic nonplanar [30]annulene pores on Au(111), starting from a same precursor. The formation of distinct products on the two substrates originates from the different thermodynamics and kinetics of coupling reactions. The reaction mechanisms were confirmed by a series of control experiments, and the appropriate thermodynamic and kinetic parameters for optimizing the reaction pathways were proposed. In addition, the combined scanning tunneling spectroscopy (STS) and density functional theory (DFT) calculations revealed the electronic structures of porous graphene structures, demonstrating the impact of nonplanar pores on the π-conjugation of molecules.

On-surface synthesis of nitrogen-doped nanographene with an [18]annulene pore on Ag(111)

On-surface synthesis is of importance to fabricate low dimensional carbon-based nanomaterials with atomic precision. Here, we synthesize nitrogen-doped nanographene with an [18]annulene pore and its dimer through sequential reactions of debromination, aryl-aryl coupling, cyclodehydrogenation and C-N coupling on Ag(111) from 3,12-dibromo-7,8-diaza[5]helicene. The inner structures of the products were characterized with scanning tunneling microscopy with a CO terminated tip at low temperature. Furthermore, the first four unoccupied electronic states of the nanographene were investigated with a combination of scanning tunneling spectroscopy and theoretical calculations. Except for the LUMO + 2 state observed at +1.3 V, the electronic states at 500 mV, 750 mV and 1.9 V were attributed to the superatom molecular orbitals at the [18]annulene pore, which were significantly shifted towards the Fermi level due to the hybridization with the confined surface state.

Prospects of 2D graphdiynes and their applications in desalination and wastewater remediation

Water is an indispensable part of human life that affects health and food intake. Water pollution caused by rapid industrialization, agriculture, and other human activities affects humanity. Therefore, researchers are prudent and cautious regarding the use of novel materials and technologies for wastewater remediation. Graphdiyne (GDY), an emerging 2D nanomaterial, shows promise in this direction. Graphdiyne has a highly symmetrical π-conjugated structure consisting of uniformly distributed pores; hence, it is favorable for applications such as oil-water separation and organic-pollutant removal. The acetylenic linkage in GDY can strongly interact with metal ions, rendering GDY applicable to heavy-metal adsorption. In addition, GDY membranes that exhibit 100% salt rejection at certain pressures are potential candidates for wastewater treatment and water reuse via desalination. This review provides deep insights into the structure, properties, and synthesis methods of GDY, owing to which it is a unique, promising material. In the latter half of the article, various applications of GDY in desalination and wastewater treatment have been detailed. Finally, the prospects of these materials have been discussed succinctly.

On-Surface Cross-Coupling Reactions

On-surface synthesis, as a bottom-up synthetic method, has been proven to be a powerful tool for atomically precise fabrication of low-dimensional carbon nanomaterials over the past 15 years. This method relies on covalent coupling reactions that occur on solid substrates such as metal or metal oxide surfaces under ultra-high-vacuum conditions, and the achievements with this method have greatly enriched fundamental science and technology. However, due to the complicated reactivity of organic groups, distinct diffusion of reactants and intermediates, and irreversibility of covalent bonds, achieving the high selectivity of covalent coupling reactions on surfaces remains a great challenge. As a result, only a few on-surface covalent coupling reactions, mainly involving dehalogenation and dehydrogenation homocoupling, are frequently used in the synthesis of low-dimensional carbon nanosystems. In this Perspective, we focus on the development and synthetic applications of on-surface cross-coupling reactions, mainly Ullmann, Sonogashira, Heck, and divergent cross-coupling reactions.

Kinetic Controlled Chirality Transfer and Induction in 2D Hydrogen-Bonding Assemblies of Glycylglycine on Au(111)

Chirality transfer is of vital importance that dominates the structure and functionality of biological systems and living matters. External physical stimulations, e.g. polarized light and mechanical forces, can trigger the chirality symmetry breaking, leading to the appearance of the enantiomeric entities created from a chiral self-assembly of achiral molecule. Here, several 2D assemblies with different chirality, synthesized on Au(111) surface by using achiral building blocks - glycylglycine (digly), the simplest polypeptide are reported. By delicately tuning the kinetic factors, i.e., one-step slow/rapid deposition, or stepwise slow deposition with mild annealing, achiral square hydrogen-bond organic frameworks (HOF), homochiral rhombic HOF and racemic rectangular assembly are achieved, respectively. Chirality induction and related symmetry broken in assemblies are introduced by the handedness (H-bond configurations in principle) of the assembled motifs and then amplified to the entire assemblies via the interaction between motifs. The results show that the chirality transfer and induction of biological assemblies can be tuned by altering the kinetic factors instead of applying external forces, which may offer an in-depth understanding and practical approach to peptide chiral assembly on the surfaces and can further facilitate the design of desired complex biomolecular superstructures.

Steering On-Surface Reactions by Kinetic and Thermodynamic Strategies

On-surface synthesis has emerged as a powerful tool to fabricate various functional low-dimensional nanostructures with atomic precision, thus becoming a promising platform for the preparation of next-generation semiconductive, magnetic, and topological nanodevices. With the aid of scanning tunneling microscopy/spectroscopy and noncontact atomic force microscopy, both the chemical structures and physical properties of the obtained products can be well characterized. A major challenge in this field is how to efficiently steer reaction pathways and improve the yield/quality of products. To address this problem, in recent years various kinetic and thermodynamic strategies have been successfully employed to control on-surface reactions. In this Perspective, we discuss these strategies in view of basic reaction steps on surfaces, including molecular adsorption, diffusion, and reaction. We hope this Perspective will help readers to deepen the understanding of the mechanisms of on-surface reactions and rationally design reaction procedures for the fabrication of high-quality functional nanomaterials on surfaces.

On-surface synthesis of enetriynes

Belonging to the enyne family, enetriynes comprise a distinct electron-rich all-carbon bonding scheme. However, the lack of convenient synthesis protocols limits the associated application potential within, e.g., biochemistry and materials science. Herein we introduce a pathway for highly selective enetriyne formation via tetramerization of terminal alkynes on a Ag(100) surface. Taking advantage of a directing hydroxyl group, we steer molecular assembly and reaction processes on square lattices. Induced by O₂ exposure the terminal alkyne moieties deprotonate and organometallic bis-acetylide dimer arrays evolve. Upon subsequent thermal annealing tetrameric enetriyne-bridged compounds are generated in high yield, readily self-assembling into regular networks. We combine high-resolution scanning probe microscopy, X-ray photoelectron spectroscopy and density functional theory calculations to examine the structural features, bonding characteristics and the underlying reaction mechanism. Our study introduces an integrated strategy for the precise fabrication of functional enetriyne species, thus providing access to a distinct class of highly conjugated π-system compounds.

Highly Selective On-Surface Reactions of Aryl Propiolic Acids via Decarboxylative Coupling

Aryl propiolic acids are introduced as a new class of monomers in the field of on-surface chemistry to build up poly(arylenebutadiynylenes) through decarboxylative Glaser coupling. As compared to aryl alkynes that are routinely used in the on-surface Glaser coupling, it is found that the decarboxylative coupling occurs at slightly lower temperature and with excellent selectivity. Activation occurs through decarboxylation for the propiolic acids, whereas the classical Glaser coupling is achieved through alkyne CH activation, and this process shows poor selectivity. The efficiency of the decarboxylative coupling is documented by the successful polymerization of bis(propiolic acids) as monomers. It is also found that the new activation mode is compatible with aryl bromide functionalities, which allows the formation of unsymmetric metal-organic polymers on the surface by chemoselective sequential reactions. All transformations are analyzed by a scanning tunneling microscope and are further studied by density functional theory calculations.

Real-space visualization of sequential debromination of polybrominated benzenes on Ag(111)

By a combination of scanning tunneling microscopy imaging and density functional theory calculations, dehalogenation processes of symmetric polyhalogenated benzenes were explored on Ag(111), and a series of intermediate states were captured and visualized in real space. These results reveal a sequential dehalogenation scenario of symmetric polybrominated aromatics, which will broaden the understanding of on-surface dehalogenation reactions.

Steering the Reaction Pathways of Terminal Alkynes by Introducing Oxygen Species: From C-C Coupling to C-H Activation

Selective regulation of chemical reactions is crucial in chemistry. Oxygen, as a key reagent in ubiquitous oxidative chemistry, exhibits great potential in regulating molecular assemblies, and more importantly, chemical reactions in molecular systems supported by metal surfaces. However, the unique catalytic performance and reaction mechanisms of oxygen species remain elusive, which are essential for understanding reaction selection and regulation. In this study, by a combination of scanning tunneling microscopy (STM) imaging/manipulations and density functional theory (DFT) calculations, we showed that the on-surface reaction pathways of terminal alkynes could be steered from C-C coupling to C-H activation with high selectivity by introducing O₂ into the molecular system. The catalytic performance and reaction mechanisms of oxygen species were explored in the C-H activation processes, and both molecular O₂ and atomic O could efficiently steer the reaction pathways. These results would provide a fundamental understanding of interfacial catalytic reaction processes.

Tandem Desulfurization/C-C Coupling Reaction of Tetrathienylbenzenes on Cu(111): Synthesis of Pentacene and an Exotic Ladder Polymer

Surface-confined reactions represent a powerful approach for the precise synthesis of low-dimensional organic materials. A complete understanding of the pathways of surface reactions would enable the rational synthesis of a wide range of molecules and polymers. Here, we report different reaction pathways of tetrathienylbenzene (T1TB) and its extended congener tetrakis(dithienyl)benzene (T2TB) on Cu(111), investigated using scanning tunneling microscopy, X-ray photoelectron spectroscopy, and density functional theory calculations. Both T1TB and T2TB undergo desulfurization when deposited on Cu(111) at room temperature. Deposition of T1TB at 453 K yields pentacene through desulfurization, hydrogen transfer, and a cascade of intramolecular cyclization. In contrast, for T2TB the intramolecular cyclization stops at anthracene and the following intermolecular C-C coupling produces a conjugated ladder polymer. We show that tandem desulfurization/C-C coupling provides a versatile approach for growing carbon-based nanostructures on metal surfaces.

On-Surface Synthesis of sp-Carbon Nanostructures

The on-surface synthesis of carbon nanostructures has attracted tremendous attention owing to their unique properties and numerous applications in various fields. With the extensive development of scanning tunneling microscope (STM) and noncontact atomic force microscope (nc-AFM), the on-surface fabricated nanostructures so far can be characterized on atomic and even single-bond level. Therefore, various novel low-dimensional carbon nanostructures, challenging to traditional solution chemistry, have been widely studied on surfaces, such as polycyclic aromatic hydrocarbons, graphene nanoribbons, nanoporous graphene, and graphyne/graphdiyne-like nanostructures. In particular, nanostructures containing sp-hybridized carbons are of great advantage for their structural linearity and small steric demands as well as intriguing electronic and mechanical properties. Herein, the recent developments of low-dimensional sp-carbon nanostructures fabricated on surfaces will be summarized and discussed.

Chemisorption-Induced Formation of Biphenylene Dimer on Ag(111)

We report an example that demonstrates the clear interdependence between surface-supported reactions and molecular-adsorption configurations. Two biphenyl-based molecules with two and four bromine substituents, i.e., 2,2'-dibromobiphenyl (DBBP) and 2,2',6,6'-tetrabromo-1,1'-biphenyl (TBBP), show completely different reaction pathways on a Ag(111) surface, leading to the selective formation of dibenzo[e,l]pyrene and biphenylene dimer, respectively. By combining low-temperature scanning tunneling microscopy, synchrotron radiation photoemission spectroscopy, and density functional theory calculations, we unravel the underlying reaction mechanism. After debromination, a biradical biphenyl can be stabilized by surface Ag adatoms, while a four-radical biphenyl undergoes spontaneous intramolecular annulation due to its extreme instability on Ag(111). Such different chemisorption-induced precursor states between DBBP and TBBP consequently lead to different reaction pathways after further annealing. In addition, using bond-resolving scanning tunneling microscopy and scanning tunneling spectroscopy, we determine with atomic precision the bond-length alternation of the biphenylene dimer product, which contains 4-, 6-, and 8-membered rings. The 4-membered ring units turn out to be radialene structures.

Leveraging the 1,3-azadiene-anhydride reaction for the synthesis of functionalized piperidines bearing up to five contiguous stereocenters

A modular and scalable strategy, which remodels 3-methylglutaric anhydride to 2-oxopiperidines bearing at least three contiguous stereocenters is described. The approach relies on the chemoselective and stereocontrolled annulation of 1,3-azadienes with the anhydride component. The resulting acid-tethered allylic 2-oxopiperidines are then engaged in several selective fragment growth processes, including catalytic denitrative alkenylation, halolactonization, and Vilsmeier–Haack functionalization.

A modular and scalable strategy, which converts 3-methylglutaric anhydride to 2-oxopiperidines bearing at least three contiguous stereocenters is described.

Identification of Topotactic Surface-Confined Ullmann-Polymerization

On-surface Ullmann coupling is an established method for the synthesis of 1D and 2D organic structures. A key limitation to obtaining ordered polymers is the uncertainty in the final structure for coupling via random diffusion of reactants over the substrate, which leads to polymorphism and defects. Here, a topotactic polymerization on Cu(110) in a series of differently-halogenated para-phenylenes is identified, where the self-assembled organometallic (OM) reactants of diiodobenzene couple directly into a single, deterministic product, whereas the other precursors follow a diffusion driven reaction. The topotactic mechanism is the result of the structure of the iodine on Cu(110), which controls the orientation of the OM reactants and intermediates to be the same as the final polymer chains. Temperature-programmed X-ray photoelectron spectroscopy and kinetic modeling reflect the differences in the polymerization regimes, and the effects of the OM chain alignments and halogens are disentangled by Nudged Elastic Band calculations. It is found that the repulsion or attraction between chains and halogens drive the polymerization to be either diffusive or topotactic. These results provide detailed insights into on-surface reaction mechanisms and prove the possibility of harnessing topotactic reactions in surface-confined Ullmann polymerization.

Head-to-Tail Oligomerization by Silylene-Tethered Sonogashira Coupling on Ag(111)

On-surface synthesis is a powerful method for the fabrication of π-conjugated nanomaterials. Herein, we demonstrate chemoselective Sonogashira coupling between (trimethylsilyl)ethynyl and chlorophenyl groups in silylethynyl- and chloro-substituted partially fluorinated phenylene ethynylenes (SiCPFPEs) on Ag(111). The desilylative Sonogashira coupling occurred with high chemoselectivity up to 75 %, while the competing Ullmann and desilylative Glaser homocoupling reactions were suppressed. A combination of bond-resolved scanning tunneling microscopy/atomic force microscopy (STM/AFM) and DFT calculations revealed that the oligomers were obtained by the formation of intermolecular silylene tethers (-Me₂ Si-) through CH₃ -Si bond activation at 130 °C and subsequent elimination of the tethers at an elevated temperature of 200 °C.

Surface-assisted fabrication of low-dimensional carbon-based nanoarchitectures

On-surface synthesis, as an alternative to traditional in-solution synthesis, has become an emerging research field and attracted extensive attention over the past decade due to its ability to fabricate nanoarchitectures with exotic properties. Compared to wet chemistry, the on-surface synthesis conducted on atomically flat solid surfaces under ultrahigh vacuum exhibits unprecedented characteristics and advantages, opening novel reaction pathways for chemical synthesis. Various low-dimensional nanostructures have been fabricated on solid surfaces (mostly metal surfaces) based on this newly developed approach. This paper reviews the classic and latest works regarding carbon-based low-dimensional nanostructures since the arrival of on-surface synthesis era. These nanostructures are categorized into zero-, one- and two-dimensional classes and each class is composed of numerous sub-nanostructures. For certain specific nanostructures, comprehensive reports are given, including precursor design, substrate choice, synthetic strategies and so forth. We hope that our review will shed light on the fabrication of some significant nanostructures in this young and promising scientific area.

On-Surface Synthesis and Molecular Engineering of Carbon-Based Nanoarchitectures

On-surface synthesis via covalent coupling of adsorbed precursor molecules on metal surfaces has emerged as a promising strategy for the design and fabrication of novel organic nanoarchitectures with unique properties and potential applications in nanoelectronics, optoelectronics, spintronics, catalysis, etc. Surface-chemistry-driven molecular engineering (i.e., bond cleavage, linkage, and rearrangement) by means of thermal activation, light irradiation, and tip manipulation plays critical roles in various on-surface synthetic processes, as exemplified by the work from the Ernst group in a prior issue of ACS Nano. In this Perspective, we highlight recent advances in and discuss the outlook for on-surface syntheses and molecular engineering of carbon-based nanoarchitectures.

Reassessing Alkyne Coupling Reactions While Studying the Electronic Properties of Diverse Pyrene Linkages at Surfaces

The combination of alkyne and halogen functional groups in the same molecule allows for the possibility of many different reactions when utilized in on-surface synthesis. Here, we use a pyrene-based precursor with both functionalities to examine the preferential reaction pathway when it is heated on an Au(111) surface. Using high-resolution bond-resolving scanning tunneling microscopy, we identify multiple stable intermediates along the prevailing reaction pathway that initiate with a clearly dominant Glaser coupling, together with a multitude of other side products. Importantly, control experiments with reactants lacking the halogen functionalization reveal the Glaser coupling to be absent and instead show the prevalence of non-dehydrogenative head-to-head alkyne coupling. We perform scanning tunneling spectroscopy on a rich variety of the product structures obtained in these experiments, providing key insights into the strong dependence of their HOMO-LUMO gaps on the nature of the intramolecular coupling. A clear trend is found of a decreasing gap that is correlated with the conversion of triple bonds to double bonds via hydrogenation and to higher levels of cyclization, particularly with nonbenzenoid product structures. We rationalize each of the studied cases.

Topology Selectivity in On-Surface Dehydrogenative Coupling Reaction: Dendritic Structure versus Porous Graphene Nanoribbon

Selective control on the topology of low-dimensional covalent organic nanostructures in on-surface synthesis has been challenging. Herein, with combined scanning tunneling microscopy (STM) and X-ray photoelectron spectroscopy (XPS), we report a successful topology-selective coupling reaction on the Cu(111) surface by tuning the thermal annealing procedure. The precursor employed is 1,3,5-tris(2-bromophenyl)benzene (TBPB), for which Ullmann coupling is impeded due to the intermolecular steric hindrance. Instead, its chemisorption on the Cu(111) substrate has triggered the ortho C-H bond activation and the following dehydrogenative coupling at room temperature (RT). In the slow annealing experimental procedure, the monomers have been preorganized by their self-assembly at RT, which enhances the formation of dendritic structures upon further annealing. However, the chaotic chirality of dimeric products (obtained at RT) and hindrance from dense molecular island make the fabrication of high-quality porous two-dimensional nanostructures difficult. In sharp contrast, direct deposition of TBPB molecules on a hot surface led to the formation of ordered porous graphene nanoribbons and nanoflakes, which is confirmed to be the energetically favorable reaction pathway through density functional theory-based thermodynamic calculations and control experiments. This work demonstrates that different thermal treatments could have a significant influence on the topology of covalent products in on-surface synthesis and presents an example of the negative effect of molecular self-assembly to the ordered covalent nanostructures.

Metalated Graphyne-Based Networks as Two-Dimensional Materials: Crystallization, Topological Defects, Delocalized Electronic States, and Site-Specific Doping

Graphyne-based two-dimensional (2D) carbon allotropes feature extraordinary physical properties; however, their synthesis as crystalline single-layered materials has remained challenging. We report on the fabrication of large-area organometallic Ag-bis-acetylide networks and their structural and electronic properties on Ag(111) using low-temperature scanning tunneling microscopy combined with density functional theory (DFT) calculations. The metalated graphyne-based networks are robust at room temperature and assembled in a bottom-up approach via surface-assisted dehalogenative homocoupling of terminal alkynyl bromides. Large-area networks of several hundred nanometers with topological defects at domain boundaries are obtained due to the Ag-acetylide bonds' reversible nature. The thermodynamically controlled growth mechanism is explained through the direct observation of intermediates, which differ on Ag(111) and Au(111). Scanning tunneling spectroscopy resolved unoccupied states delocalized across the network. The energy of these states can be shifted locally by the attachment of a different number of Br atoms within the network. DFT revealed that free-standing metal-bis-acetylide networks are semimetals with a linear band dispersion around several high-symmetry points, which suggest the presence of Weyl points. These results demonstrate that the organometallic Ag-bis-acetylide networks feature the typical 2D material properties, which make them of great interest for fundamental studies and electronic materials in devices.

Atomic-Scale Visualization of Stepwise Growth Mechanism of Metal-Alkynyl Networks on Surfaces

One of the most appealing topics in the study of metal-organic networks is the growth mechanism. However, its study is still considered a significant challenge. Herein, using scanning tunneling microscopy, the growth mechanisms of metal-alkynyl networks on Ag(111) and Au(111) surfaces were investigated at the atomic scale. During the reaction of 1,3,5-tris(chloroethynyl)benzene on Ag(111), honeycomb Ag-alkynyl networks formed at 393 K, and only short chain intermediates were observed. By contrast, the same precursor formed honeycomb Au-alkynyl networks on Au(111) at 503 K. Progression annealing led to a stepwise evolution process, in which the sequential activation of three Cl-alkynyl bonds led to the formation of dimers, zigzag chains, and novel chiral networks as the intermediates. Moreover, density functional theory calculations indicate that chlorine atoms are crucial in assisting the breakage of metal-alkynyl bonds to form Cl-metal-alkynyl, which guarantees the reversibility of the break/formation equilibration as the key to forming regular large-scale organometallic networks.

Graphene-Like Covalent Organic Framework with a Wide Band Gap Synthesized On Surface via Stepwise Reactions

Developing graphene-like two-dimensional materials naturally possessing a band gap has sparked enormous interest. Thanks to the inherent wide band gap and high mobility in the 2D plane, covalent organic frameworks containing triazine rings (t-COFs) hold great promise in this regard, whilst the synthesis of single-layer t-COFs remains highly challenging. Herein, we present the fabrication of a well-defined graphene-like t-COF on Au(111). Instead of single/multiple-step single-type reactions commonly applied for on-surface synthesis, distinct stepwise on-surface reactions, including alkynyl cyclotrimerization, C-O bond cleavage, and C-H bond activation, are triggered on demand, leading to product evolution in a controlled step-by-step manner. Aside from the precise control in sophisticated on-surface synthesis, this work proposes a single-atomic-layer organic semiconductor with a wide band gap of 3.41 eV.

On-Surface Synthesis of a Five-Membered Carbon Ring from a Terminal Alkynyl Bromide: A [4 + 1] Annulation

We report an on-surface synthesis of five-membered carbon ring via a [4 + 1] annulation reaction, starting from a simple terminal alkynyl bromide, 4-(bromoethynyl)biphenyl, on Ag(110). The combination of scanning tunneling microscopy (STM), synchrotron radiation photoemission spectroscopy (SRPES), and density functional theory (DFT) calculations unravel the reaction pathway and mechanism. Three basic reaction steps are involved, successively including the formation of alkynyl-Ag-alkynyl bridged organometallic dimer, the generation of alkylidene carbene intermediate, and the final [4 + 1] annulation involving a hydrogen transfer step.

On-Surface Assembly of Hydrogen- and Halogen-Bonded Supramolecular Graphyne-Like Networks

Demonstrated here is a supramolecular approach to fabricate highly ordered monolayered hydrogen‐ and halogen‐bonded graphyne‐like two‐dimensional (2D) materials from triethynyltriazine derivatives on Au(111) and Ag(111). The 2D networks are stabilized by N⋅⋅⋅H−C(sp) bonds and N⋅⋅⋅Br−C(sp) bonds to the triazine core. The structural properties and the binding energies of the supramolecular graphynes have been investigated by scanning tunneling microscopy in combination with density‐functional theory calculations. It is revealed that the N⋅⋅⋅Br−C(sp) bonds lead to significantly stronger bonded networks compared to the hydrogen‐bonded networks. A systematic analysis of the binding energies of triethynyltriazine and triethynylbenzene derivatives further demonstrates that the X₃‐synthon, which is commonly observed for bromobenzene derivatives, is weaker than the X₆‐synthon for our bromotriethynyl derivatives.

Quality control of on-surface-synthesised seven-atom wide armchair graphene nanoribbons

On-surface synthesis is a powerful method for fabricating atomically precise graphene nanoribbons (GNRs), but the products always include defective structures. In this study, scanning tunnelling microscopy and atomic force microscopy were used to determine the length distribution of armchair-edge GNRs with a width of seven carbon atoms (7-AGNRs) synthesised on Au(111) and to characterise defective structures. The product quality was improved by increasing the precursor deposition amount because of a preference for intermolecular polymerisation over intramolecular cyclodehydrogenation at a high coverage. However, the annealing rate had a complex effect on the quality, with a low rate elongating 7-AGNRs but degenerating the length uniformity. These insights advance the understanding of the critical parameters for obtaining high-quality products in high yield by on-surface synthesis.

Direct observation of the geometric isomer selectivity of a reaction controlled via adsorbed bromine

Methods to improve the specificity of stereoselective reactions are paramount to the viability of reaction-based processes. Surface-bound methods are a powerful means to carry out reactions with selectivity in the pursuit of specific products or nanoarchitectures through bottom-up assembly. The Ullmann-like coupling reaction has come to represent one of the most useful methods to form two-dimensional structures through covalent couplings of aromatic molecules following the dissociation of an aryl carbon-halide bond. The leaving halogen atoms are proven to remain adsorbed on the surface and can be deleterious to the fabrication of larger conjugated superstructures. However, on Au(100) we have found the leaving halogen atoms generate a new adsorbate surface that leads to geometric isomer selectivity compared to the unmodified metal surface. The covalent coupling of 3,6-dibromo-phenanthrenequinone (DBPQ) was studied and leaving bromine atoms were found to form self-assembled islands and modify the reconstruction of Au(100). Subsequently, the coupling reaction yielded total selectivity towards a radical trans dimer when surrounded by bromine atoms, while only cis dimers were observed on the undecorated Au surface. This selectivity induced by bromine networks on the surface ultimately results in another potent way to control the stereoselectivity of surface-bound coupling reactions.

On-surface synthesis of extended linear graphyne molecular wires by protecting the alkynyl group

In this paper we report on the use of an Ullmann-like aryl halide homocoupling reaction to obtain long Graphyne Molecular Wires (GY MWs) organized in dense, ordered arrays.

Modular synthesis and transition metal-free alkynylation/alkenylation of Castagnoli–Cushman-derived N,O- and N,S-heterocyclic vinyl chlorides

A modular and functional group-tolerant protocol for the transition metal-free coupling of novel N,O- and N,S-heterocyclic vinyl chlorides with terminal acetylenes and styrenes has been developed, leading to the epimerization-free synthesis of fully carbofunctionalized dihydro-1,4-oxazines/thiazines. Bicyclic morpholines have also been prepared through the interrogation of newly synthesized cross-conjugated dienes in Diels–Alder reactions. The use of environmentally benign reaction media endows the current strategy with a practical advantage.

A functional group-tolerant and transition metal-free coupling of novel N,O- and N,S-heterocyclic vinyl chlorides, which affords fully carbosubstituted dihydro-1,4-oxazines/thiazines as well as bicyclic morpholines, is described.

Hydrogen bond guided synthesis of close-packed one-dimensional graphdiyne on the Ag(111) surface

Aided by hydrogen bonding, alkyne and oxazole functionalized precursors undergo uniform self-assembly, which serves as a template for the fabrication of one-dimensional graphdiyne-like wires on the Ag(111) surface.

On-Surface Activation of Trimethylsilyl-Terminated Alkynes on Coinage Metal Surfaces

The controlled attachment of protecting groups combined with the ability to selectively abstract them is central to organic synthesis. The trimethylsilyl (TMS) functional group is a popular protecting group in solution. However, insights on its activation behavior under ultra-high vacuum (UHV) and surface-confined conditions are scarce. Here we investigate a series of TMS-protected alkyne precursors via scanning tunneling microscopy (STM) regarding their compatibility with organic molecular beam epitaxy (OMBE) and their potential deprotection on various coinage metal surfaces. After in-situ evaporation on the substrates held in UHV at room temperature, we find that all molecules arrived and adsorbed as intact units forming ordered supramolecular aggregates stabilized by non-covalent interactions. Thus, TMS-functionalized alkyne precursors with weights up to 1100 atomic mass units are stable against OMBE evaporation in UHV. Furthermore, the TMS activation through thermal annealing is investigated with STM and X-ray photoelectron spectroscopy (XPS). We observe that deprotection starts to occur between 400 K and 500 K on the copper and gold surfaces, respectively. In contrast, on silver surfaces, the TMS-alkyne bond remains stable up to temperatures where molecular desorption sets in (≈600 K). Hence, TMS functional groups can be utilized as leaving groups on copper and gold surfaces while they serve as protecting groups on silver surfaces.

Kinetic Control over Morphology of Nanoporous Graphene on Surface

On-surface synthesis of high-quality nanoporous graphene (NPG) for application in nanotechnology and nanodevices remains challenging. Rational design of molecular precursors and proper kinetic control over the reaction process are the two key factors to tune the synthesis. Herein, we report a detailed study of the coupling reactions of a planar halogen-substituted nanographene molecular precursor, hexaiodo-peri-hexabenzocoronene (I₆ -HBC), on the Au(111) surface in the synthesis of NPG. The influence of three basic kinetic processes - molecular adsorption, migration, and coupling - on the synthesis was investigated. The results show that the HBC molecules deposited at low temperature predominantly desorb from the Au(111) surface during the annealing process, whereas depositing the precursor molecules onto a hot surface (700 K) can lead to the formation of NPG. However, at such a high surface temperature, simultaneous intermolecular dehydrogenative coupling between HBC monomers can hinder the ordered growth of NPG through Ullmann coupling. Moreover, the deposition rate of the precursors greatly influences the growth morphology of the NPG nanostructures.