1
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Tuo DH, Fa S, Tanaka S, Shimada T, Yamashita M, Togari Y, Ohtani S, Kato K, Urayama K, Zhang Q, Yasuhara K, Ogoshi T. Helical-Sense Matching Facilitates Supramolecular Copolymerization of Helical-Chiral Pillar[5]arenes. J Am Chem Soc 2024. [PMID: 39527493 DOI: 10.1021/jacs.4c10765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2024]
Abstract
Supramolecular polymerization using two-dimensional π-conjugated chiral monomers has been mainly demonstrated because the supramolecular polymerization can be controlled by stereocommunication through π-π stacking between the two-dimensional chiral monomers. We herein report supramolecular copolymerization utilizing three-dimensional pentahedrons with twisted helical chirality through different combinations of helical-chiral acidic and basic pillar[5]arenes as comonomers. In this case, helical-sense matching is key to facilitating the supramolecular copolymerization. Based on the unique helical chirality of the three-dimensional pillared structure of the pillar[5]arenes and alternate ion-pairing interactions between acidic and basic groups on their bilateral rims, the homochiral helical-sense matching system forms kinetically stable nanowire-shaped supramolecular copolymers, generating the supramolecular gel in high concentrations. At elevated temperatures, the nanowire structure undergoes a transformation into thermodynamically stable nanoparticles, resulting in a gel-to-sol transition. This process can be hindered by introducing linear guest molecules, which prohibit the unit swing of pillar[5]arenes and stabilize the nanowires and supramolecular gel. By tailoring the enantiomeric ratio (e.r.) values of the chiral combinations, the helical-sense-dependent gel-to-sol transition was realized, specifically by decreasing the e.r. values. Because of helical-sense mismatching, the heterochiral system generates short, branched nanowires and presents as a turbid solution. These distinct differences reveal that the helical-sense matching between three-dimensional chiral pillar[5]arene comonomers is important for supramolecular copolymerization.
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Affiliation(s)
- De-Hui Tuo
- WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Shixin Fa
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, P.R. China
| | - Seigo Tanaka
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Takuma Shimada
- Department of Polymer Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Masataka Yamashita
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Yuki Togari
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Shunsuke Ohtani
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Kenichi Kato
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Kenji Urayama
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Qiuyu Zhang
- School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, P.R. China
| | - Kazuma Yasuhara
- Division of Materials Science, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Tomoki Ogoshi
- WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
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2
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Du S, Jiang Y, Jiang H, Zhang L, Liu M. Pathway-Dependent Self-Assembly for Control over Helical Nanostructures and Topochemical Photopolymerization. Angew Chem Int Ed Engl 2024; 63:e202316863. [PMID: 38116831 DOI: 10.1002/anie.202316863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 12/06/2023] [Accepted: 12/18/2023] [Indexed: 12/21/2023]
Abstract
Pathway-dependent self-assembly, in which a single building block forms two or more types of self-assembled nanostructures, is an important topic due to its mimic to the complexity in biology and manipulation of diverse supramolecular materials. Here, we report a pathway-dependent self-assembly using chiral glutamide derivatives (L or D-PAG), which form chiral nanotwist and nanotube through a cooperative slow cooling and an isodesmic fast cooling process, respectively. Furthermore, pathway-dependent self-assembly can be harnessed to control over the supramolecular co-assembly of PAG with a luminophore β-DCS or a photopolymerizable PCDA. Fast cooling leads to the co-assembled PAG/β-DCS nanotube exhibiting green circularly polarized luminescence (CPL), while slow cooling to nanofiber with blue CPL. Additionally, fast cooling process promotes the photopolymerization of PCDA into a red chiral polymer, whereas slow cooling inhibits the polymerization. This work not only demonstrates the pathway-dependent control over structural characteristics but also highlights the diverse functions emerged from the different assemblies.
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Affiliation(s)
- Sifan Du
- National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences (CAS), ZhongGuanCun North First Street 2, Beijing, 100190, China
- School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, P. R. China
| | - Yuqian Jiang
- Key laboratory of Nanosystem and Hierarchical Fabrication, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China
| | - Hejin Jiang
- National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences (CAS), ZhongGuanCun North First Street 2, Beijing, 100190, China
| | - Li Zhang
- National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences (CAS), ZhongGuanCun North First Street 2, Beijing, 100190, China
| | - Minghua Liu
- National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences (CAS), ZhongGuanCun North First Street 2, Beijing, 100190, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
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3
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Takahashi S, Matsumoto T, Hollamby MJ, Miyasaka H, Vacha M, Sotome H, Yagai S. Impact of Ring-Closing on the Photophysical Properties of One-Dimensional π-Conjugated Molecular Aggregate. J Am Chem Soc 2024; 146:2089-2101. [PMID: 38163763 DOI: 10.1021/jacs.3c11407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
The self-assembled state of molecules plays a pivotal role in determining how inherent molecular properties transform and give rise to supramolecular functionalities and has long attracted attention. However, understanding the influence of morphologies spanning the nano- to mesoscopic scales of supramolecular assemblies derived from identical intermolecular interactions has been notoriously challenging due to dynamic structural change and monomer exchange of assemblies in solution. In this study, we demonstrate that curved one-dimensional molecular assemblies (supramolecular polymers) of lengths of around 70-200 nm, originating from the same luminescent molecule, exhibit distinct photoluminescent properties when they form closed circular structures (toroids) versus when they possess chain termini in solution (random coils). By exploiting the difference in kinetic stability between the toroids and random coils, we developed a dialysis protocol to selectively purify the former. It was revealed that these terminus-free closed structures manifest higher energy and more efficient luminescence compared with their mixed state with random coils. Time-resolved fluorescence measurements unveiled that random coils, due to their dynamic structural fluctuation in solution, generate local defects throughout the main chain, leading to luminescence from lower energy levels. In mixtures of the two assemblies, luminescence was exclusively observed from such a lower energy level of random coils, a result attributed to energy transfer between the assemblies. This work emphasizes that for identical supramolecular assemblies, only averaged properties have traditionally been considered, but their structures at the nano- to mesoscopic scale are important especially if they have a certain degree of shape persistency even in solution.
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Affiliation(s)
- Sho Takahashi
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Takuma Matsumoto
- Department of Materials Science and Engineering, Tokyo Institute of Technology, 2-12 Meguro-ku, Tokyo 152-8552, Japan
| | - Martin J Hollamby
- Department of Chemistry, School of Chemical and Physical Sciences, Keele University, Keele, Staffordshire ST55BG, U.K
| | - Hiroshi Miyasaka
- Division of Frontier Materials Science and Centre for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, Japan
| | - Martin Vacha
- Department of Materials Science and Engineering, Tokyo Institute of Technology, 2-12 Meguro-ku, Tokyo 152-8552, Japan
| | - Hikaru Sotome
- Division of Frontier Materials Science and Centre for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, Japan
| | - Shiki Yagai
- Institute for Advanced Academic Research (IAAR), Chiba University, 1-33, Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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4
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Lago-Silva M, Fernández-Míguez M, Rodríguez R, Quiñoá E, Freire F. Stimuli-responsive synthetic helical polymers. Chem Soc Rev 2024; 53:793-852. [PMID: 38105704 DOI: 10.1039/d3cs00952a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Synthetic dynamic helical polymers (supramolecular and covalent) and foldamers share the helix as a structural motif. Although the materials are different, these systems also share many structural properties, such as helix induction or conformational communication mechanisms. The introduction of stimuli responsive building blocks or monomer repeating units in these materials triggers conformational or structural changes, due to the presence/absence of the external stimulus, which are transmitted to the helix resulting in different effects, such as assymetry amplification, helix inversion or even changes in the helical scaffold (elongation, J/H helical aggregates). In this review, we show through selected examples how different stimuli (e.g., temperature, solvents, cations, anions, redox, chiral additives, pH or light) can alter the helical structures of dynamic helical polymers (covalent and supramolecular) and foldamers acting on the conformational composition or molecular structure of their components, which is also transmitted to the macromolecular helical structure.
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Affiliation(s)
- María Lago-Silva
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Manuel Fernández-Míguez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Rafael Rodríguez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Emilio Quiñoá
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Félix Freire
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
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5
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Otsuka C, Takahashi S, Isobe A, Saito T, Aizawa T, Tsuchida R, Yamashita S, Harano K, Hanayama H, Shimizu N, Takagi H, Haruki R, Liu L, Hollamby MJ, Ohkubo T, Yagai S. Supramolecular Polymer Polymorphism: Spontaneous Helix-Helicoid Transition through Dislocation of Hydrogen-Bonded π-Rosettes. J Am Chem Soc 2023; 145:22563-22576. [PMID: 37796243 DOI: 10.1021/jacs.3c07556] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/06/2023]
Abstract
Polymorphism, a phenomenon whereby disparate self-assembled products can be formed from identical molecules, has incited interest in the field of supramolecular polymers. Conventionally, the monomers that constitute supramolecular polymers are engineered to facilitate one-dimensional aggregation and, consequently, their polymorphism surfaces primarily when the states of assembly differ significantly. This engenders polymorphs of divergent dimensionalities such as one- and two-dimensional aggregates. Notwithstanding, realizing supramolecular polymer polymorphism, wherein polymorphs maintain one-dimensional aggregation, persists as a daunting challenge. In this work, we expound upon the manifestation of two supramolecular polymer polymorphs formed from a large discotic supramolecular monomer (rosette), which consists of six hydrogen-bonded molecules with an extended π-conjugated core. These polymorphs are generated in mixtures of chloroform and methylcyclohexane, attributable to distinctly different disc stacking arrangements. The face-to-face (minimal displacement) and offset (large displacement) stacking arrangements can be predicated on their distinctive photophysical properties. The face-to-face stacking results in a twisted helix structure. Conversely, the offset stacking induces inherent curvature in the supramolecular fiber, thereby culminating in a hollow helical coil (helicoid). While both polymorphs exhibit bistability in nonpolar solvent compositions, the face-to-face stacking attains stability purely in a kinetic sense within a polar solvent composition and undergoes conversion into offset stacking through a dislocation of stacked rosettes. This occurs without the dissociation and nucleation of monomers, leading to unprecedented helicoidal folding of supramolecular polymers. Our findings augment our understanding of supramolecular polymer polymorphism, but they also highlight a distinctive method for achieving helicoidal folding in supramolecular polymers.
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Affiliation(s)
- Chie Otsuka
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Sho Takahashi
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Atsushi Isobe
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Takumi Aizawa
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Ryoma Tsuchida
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Shuhei Yamashita
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba 263-8522, Japan
| | - Koji Harano
- Center for Basic Research on Materials, National Institute for Materials Science, Tsukuba 305-0044, Japan
| | - Hiroki Hanayama
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba 263-8522, Japan
| | - Nobutaka Shimizu
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801, Japan
| | - Hideaki Takagi
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801, Japan
| | - Rie Haruki
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba 305-0801, Japan
| | - Luzhi Liu
- School of Chemistry and Chemical Engineering, Guangxi University, Nanning, Guangxi 530004, China
| | - Martin J Hollamby
- Department of Chemistry, School of Chemical and Physical Sciences, Keele University, Keele, Staffordshire ST55BG, U.K
| | - Takahiro Ohkubo
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba 263-8522, Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba 263-8522, Japan
- Institute for Advanced Academic Research (IAAR), Chiba University, Chiba 263-8522, Japan
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6
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Wagh MA, Shinde DR, Gamidi RK, Sanjayan GJ. 2-Amino-5-methylene-pyrimidine-4,6-dione-based Janus G-C nucleobase as a versatile building block for self-assembly. Org Biomol Chem 2023; 21:6914-6918. [PMID: 37593940 DOI: 10.1039/d3ob01174g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/19/2023]
Abstract
This communication reports a nature-inspired Janus G-C nucleobase featuring two recognition sites: DDA (G mimic) and DAA (C mimic), which is capable of forming a linear tape-like supramolecular polymer structure. As demonstrated herein, the amino group of this self-assembling system can be further modified to yield a highly stable quadruple H-bonding system as well as a masked self-assembling system cleavable upon exposure to light.
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Affiliation(s)
- Mahendra A Wagh
- Organic Chemistry Division, CSIR-National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune-411008, India.
- Academy of Scientific and Innovative research (AcSIR), Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh-201002, India
| | - Dinesh R Shinde
- Organic Chemistry Division, CSIR-National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune-411008, India.
- Academy of Scientific and Innovative research (AcSIR), Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh-201002, India
| | - Rama Krishna Gamidi
- Organic Chemistry Division, CSIR-National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune-411008, India.
| | - Gangadhar J Sanjayan
- Organic Chemistry Division, CSIR-National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune-411008, India.
- Academy of Scientific and Innovative research (AcSIR), Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh-201002, India
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7
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Xu F, Feringa BL. Photoresponsive Supramolecular Polymers: From Light-Controlled Small Molecules to Smart Materials. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2204413. [PMID: 36239270 DOI: 10.1002/adma.202204413] [Citation(s) in RCA: 69] [Impact Index Per Article: 69.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 08/18/2022] [Indexed: 06/16/2023]
Abstract
Photoresponsive supramolecular polymers are well-organized assemblies based on highly oriented and reversible noncovalent interactions containing photosensitive molecules as (co-)monomers. They have attracted increasing interest in smart materials and dynamic systems with precisely controllable functions, such as light-driven soft actuators, photoresponsive fluorescent anticounterfeiting and light-triggered electronic devices. The present review discusses light-activated molecules used in photoresponsive supramolecular polymers with their main photo-induced changes, e.g., geometry, dipole moment, and chirality. Based on these distinct changes, supramolecular polymers formed by light-activated molecules exhibit photoresponsive disassembly and reassembly. As a consequence, photo-induced supramolecular polymerization, "depolymerization," and regulation of the lengths and topologies are observed. Moreover, the light-controlled functions of supramolecular polymers, such as actuation, emission, and chirality transfer along length scales, are highlighted. Furthermore, a perspective on challenges and future opportunities is presented. Besides the challenge of moving from harmful UV light to visible/near IR light avoiding fatigue, and enabling biomedical applications, future opportunities include light-controlled supramolecular actuators with helical motion, light-modulated information transmission, optically recyclable materials, and multi-stimuli-responsive supramolecular systems.
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Affiliation(s)
- Fan Xu
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, Groningen, 9747 AG, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, Groningen, 9747 AG, The Netherlands
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8
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Bäumer N, Castellanos E, Soberats B, Fernández G. Bioinspired crowding directs supramolecular polymerisation. Nat Commun 2023; 14:1084. [PMID: 36841784 PMCID: PMC9968348 DOI: 10.1038/s41467-023-36540-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Accepted: 02/06/2023] [Indexed: 02/27/2023] Open
Abstract
Crowding effects are crucial to maintaining functionality in biological systems, but little is known about their role in analogous artificial counterparts. Within the growing field of supramolecular polymer science, crowding effects have hitherto remained underappreciated. Herein, we show that crowding effects exhibit strong and distinct control over the kinetics, accessible pathways and final outcomes of supramolecular polymerisation processes. In the presence of a pre-formed supramolecular polymer as crowding agent, a model supramolecular polymer dramatically changes its self-assembly behaviour and undergoes a morphological transformation from bundled fibres into flower-like hierarchical assemblies, despite no co-assembly taking place. Notably, this new pathway can only be accessed in crowded environments and when the crowding agent exhibits a one-dimensional morphology. These results allow accessing diverse morphologies and properties in supramolecular polymers and pave the way towards a better understanding of high-precision self-assembly in nature.
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Affiliation(s)
- Nils Bäumer
- grid.5949.10000 0001 2172 9288Westfälische-Wilhelms Universität Münster, Organisch Chemisches Institut, Corrensstraße 36, 48149 Münster, Germany
| | - Eduardo Castellanos
- grid.9563.90000 0001 1940 4767Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122 Spain
| | - Bartolome Soberats
- grid.9563.90000 0001 1940 4767Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122 Spain
| | - Gustavo Fernández
- Westfälische-Wilhelms Universität Münster, Organisch Chemisches Institut, Corrensstraße 36, 48149, Münster, Germany.
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9
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Saito T, Kajitani T, Yagai S. Amplification of Molecular Asymmetry during the Hierarchical Self-Assembly of Foldable Azobenzene Dyads into Nanotoroids and Nanotubes. J Am Chem Soc 2023; 145:443-454. [PMID: 36574732 DOI: 10.1021/jacs.2c10631] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The amplification of molecular asymmetry through self-assembly is a phenomenon that not only comprehends the origin of homochirality in nature but also produces chiroptically active functional materials from molecules with minimal enantiomeric purity. Understanding how molecular asymmetry can be transferred and amplified into higher-order structures in a hierarchical self-assembly system is important but still unexplored. Herein, we present an intriguing example of the amplification of molecular asymmetry in hierarchically self-assembled nanotubes that feature discrete and isolatable toroidal intermediates. The hierarchical self-assembly is initiated via asymmetric intramolecular folding of scissor-shaped azobenzene dyads furnished with chiral side chains. When scalemic mixtures of the enantiomers are dissolved in a non-polar solvent and cooled to 20 °C, single-handed nanotoroids are formed, as confirmed using atomic force microscopy and circular dichroism analyses. A strong majority-rules effect at the nanotoroid level is observed and can be explained by a low mismatch penalty and a high helix-reversal penalty. The single-handed nanotoroids stack upon cooling to 0 °C to exclusively afford their respective single-handed nanotubes. Thus, the same degree of amplification of molecular asymmetry is realized at the nanotube level. The internal packing efficiency of molecules within nanotubes prepared from the pure enantiomers or their scalemic mixtures is likely different, as suggested by the absence of higher-order structure (supercoil) formation in the latter. X-ray diffraction analysis of the anisotropically oriented nanotube films revealed looser molecular packing within the scalemic nanotubes, which clearly reflects the lower enantiomeric purity of their internal chiral side chains.
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Affiliation(s)
- Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Takashi Kajitani
- Open Facility development office, Open Facility Center, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8503, Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan.,Institute for Advanced Academic Research (IAAR), Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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10
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Matern J, Fernández Z, Bäumer N, Fernández G. Expanding the Scope of Metastable Species in Hydrogen Bonding-Directed Supramolecular Polymerization. Angew Chem Int Ed Engl 2022; 61:e202203783. [PMID: 35362184 PMCID: PMC9321731 DOI: 10.1002/anie.202203783] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Indexed: 12/23/2022]
Abstract
We reveal unique hydrogen (H-) bonding patterns and exploit them to control the kinetics, pathways and length of supramolecular polymers (SPs). New bisamide-containing monomers were designed to elucidate the role of competing intra- vs. intermolecular H-bonding interactions on the kinetics of supramolecular polymerization (SP). Remarkably, two polymerization-inactive metastable states were discovered. Contrary to previous examples, the commonly assumed intramolecularly H-bonded monomer does not evolve into intermolecularly H-bonded SPs via ring opening, but rather forms a metastable dimer. In this dimer, all H-bonding sites are saturated, either intra- or intermolecularly, hampering elongation. The dimers exhibit an advantageous preorganization, which upon opening of the intramolecular portion of the H-bonding motif facilitates SP in a consecutive process. The retardation of spontaneous self-assembly as a result of two metastable states enables length control in SP by seed-mediated growth.
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Affiliation(s)
- Jonas Matern
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | - Zulema Fernández
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | - Nils Bäumer
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | - Gustavo Fernández
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
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11
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Helmers I, Hossain MS, Bäumer N, Wesarg P, Soberats B, Shimizu LS, Fernández G. Anti-cooperative Self-Assembly with Maintained Emission Regulated by Conformational and Steric Effects. Angew Chem Int Ed Engl 2022; 61:e202200390. [PMID: 35112463 PMCID: PMC9311066 DOI: 10.1002/anie.202200390] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2022] [Indexed: 12/28/2022]
Abstract
Herein, we present a strategy to enable a maintained emissive behavior in the self-assembled state by enforcing an anti-cooperative self-assembly involving weak intermolecular dye interactions. To achieve this goal, we designed a conformationally flexible monomer unit 1 with a central 1,3-substituted (diphenyl)urea hydrogen bonding synthon that is tethered to two BODIPY dyes featuring sterically bulky trialkoxybenzene substituents at the meso-position. The competition between attractive forces (H-bonding and aromatic interactions) and destabilizing effects (steric and competing conformational effects) limits the assembly, halting the supramolecular growth at the stage of small oligomers. Given the presence of weak dye-dye interactions, the emission properties of molecularly dissolved 1 are negligibly affected upon aggregation. Our findings contribute to broadening the scope of emissive supramolecular assemblies and controlled supramolecular polymerization.
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Affiliation(s)
- Ingo Helmers
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | | | - Nils Bäumer
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | - Paul Wesarg
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
| | - Bartolome Soberats
- Department of ChemistryUniversity of the Balearic IslandsCra. Valldemossa, Km. 7.507122Palma de MallorcaSpain
| | - Linda S. Shimizu
- Department of Chemistry and BiochemistryUniversity of South CarolinaColumbiaSC 29208USA
| | - Gustavo Fernández
- Organisch-Chemisches InstitutWestfälische Wilhelms-Universität MünsterCorrensstraße 3648149MünsterGermany
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12
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Matern J, Fernandez Z, Bäumer N, Fernandez G. Expanding the Scope of Metastable Species in Hydrogen Bonding‐Directed Supramolecular Polymerization. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Jonas Matern
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | - Zulema Fernandez
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | - Nils Bäumer
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | - Gustavo Fernandez
- WWU Münster Organisch-Chemisches Institut Correnstraße, 4ß 48149 Münster GERMANY
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13
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Suda N, Saito T, Arima H, Yagai S. Photo-modulation of supramolecular polymorphism in the self-assembly of a scissor-shaped azobenzene dyad into nanotoroids and fibers. Chem Sci 2022; 13:3249-3255. [PMID: 35414866 PMCID: PMC8926283 DOI: 10.1039/d2sc00690a] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 02/23/2022] [Indexed: 12/16/2022] Open
Abstract
Recent advances in the research field of supramolecularly engineered dye aggregates have enabled the design of simple one-dimensional stacks such as fibers and of closed structures such as nanotoroids (nanorings). More complex and advanced supramolecular systems could potentially be designed using a molecule that is able to provide either of these distinct nanostructures under different conditions. In this study, we introduced bulky but strongly aggregating cholesterol units to a scissor-shaped azobenzene dyad framework, which affords either nanotoroids, nanotubes, or 1D fibers, depending on the substituents. This new dyad with two trans-azobenzene arms shows supramolecular polymorphism in its temperature-controlled self-assembly, leading to not only oligomeric nanotoroids as kinetic products, but also to one-dimensional fibers as thermodynamic products. This supramolecular polymorphism can also be achieved via photo-triggered self-assembly, i.e., irradiation of a monomeric solution of the dyad with two cis-azobenzene arms using strong visible light leads to the preferential formation of nanotoroids, whereas irradiation with weak visible light leads to the predominant formation of 1D fibers. This is the first example of a successful light-induced modulation of supramolecular polymorphism to produce distinctly nanostructured aggregates under isothermal conditions.
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Affiliation(s)
- Natsuki Suda
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Hironari Arima
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
- Institute for Global Prominent Research (IGPR), Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
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14
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Helmers I, Hossain MS, Bäumer N, Wesarg P, Soberats B, Shimizu LS, Fernandez G. Anti‐cooperative Self‐Assembly with Maintained Emission Regulated by Conformational and Steric Effects. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Ingo Helmers
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | | | - Nils Bäumer
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | - Paul Wesarg
- WWU Münster: Westfalische Wilhelms-Universitat Munster Organisch-Chemisches Institut GERMANY
| | - Bartolome Soberats
- Universitat de les Illes Balears Facultat de Ciencies Quimica Organica SPAIN
| | - Linda S. Shimizu
- University of South Carolina Chemistry and Biochemistry UNITED STATES
| | - Gustavo Fernandez
- WWU Münster Organisch-Chemisches Institut Correnstraße, 4ß 48149 Münster GERMANY
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15
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Kawaura M, Aizawa T, Takahashi S, Miyasaka H, Sotome H, Yagai S. Fluorescent supramolecular polymers of barbiturate dyes with thiophene-cored twisted π-systems. Chem Sci 2022; 13:1281-1287. [PMID: 35222911 PMCID: PMC8809409 DOI: 10.1039/d1sc06246h] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Accepted: 12/08/2021] [Indexed: 01/01/2023] Open
Abstract
Because supramolecular polymerization of emissive π-conjugated molecules depends strongly on π-π stacking interaction, the formation of well-defined one-dimensional nanostructures often results in a decrease or only a small increase of emission efficiency. This is also true for our barbiturate-based supramolecular polymers wherein hydrogen-bonded rosettes of barbiturates stack quasi-one-dimensionally through π-π stacking interaction. Herein we report supramolecular polymerization-induced emission of two regioisomeric 2,3-diphenylthiophene derivatives functionalized with barbituric acid and tri(dodecyloxy)benzyl wedge units. In CHCl3, both compounds are molecularly dissolved and accordingly poorly emissive due to a torsion-induced non-radiative decay. In methylcyclohexane-rich conditions, these barbiturates self-assemble to form crystalline nanofibers and exhibit strongly enhanced emission through supramolecular polymerization driven by hydrogen-bonding. Our structural analysis suggests that the barbiturates form a tape-like hydrogen-bonding motif, which is rationalized by considering that the twisted geometries of 2,3-diphenylthiophene cores prevend the competing rosettes from stacking into columnar supramolecular polymers. We also found that a small difference in the molecular polarity originating from the substitutional position of the thiophene core influences interchain association of the supramolecular polymers, affording different luminescent soft materials, gel and nanosheet.
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Affiliation(s)
- Maika Kawaura
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Takumi Aizawa
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Sho Takahashi
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Hiroshi Miyasaka
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University 1-3 Machikaneyama, Toyonaka Osaka 560-8531 Japan
| | - Hikaru Sotome
- Division of Frontier Materials Science, Graduate School of Engineering Science, Osaka University 1-3 Machikaneyama, Toyonaka Osaka 560-8531 Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
- Institute for Global Prominent Research (IGPR), Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
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16
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Yoshida M, Hirao T, Haino T. Self-assembly of neutral platinum complexes controlled by thermal inputs. Chem Commun (Camb) 2022; 58:8356-8359. [DOI: 10.1039/d2cc02571j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this report, we describe the self-assembly behavior of neutral platinum complexes in toluene. The platinum complexes were seen to form two different types of assemblies depending on the preparation...
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17
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Bäumer N, Matern J, Fernández G. Recent progress and future challenges in the supramolecular polymerization of metal-containing monomers. Chem Sci 2021; 12:12248-12265. [PMID: 34603655 PMCID: PMC8480320 DOI: 10.1039/d1sc03388c] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Accepted: 09/04/2021] [Indexed: 11/21/2022] Open
Abstract
The self-assembly of discrete molecular entities into functional nanomaterials has become a major research area in the past decades. The library of investigated compounds has diversified significantly, while the field as a whole has matured. The incorporation of metal ions in the molecular design of the (supra-)molecular building blocks greatly expands the potential applications, while also offering a promising approach to control molecular recognition and attractive and/or repulsive intermolecular binding events. Hence, supramolecular polymerization of metal-containing monomers has emerged as a major research focus in the field. In this perspective article, we highlight recent significant advances in supramolecular polymerization of metal-containing monomers and discuss their implications for future research. Additionally, we also outline some major challenges that metallosupramolecular chemists (will) have to face to produce metallosupramolecular polymers (MSPs) with advanced applications and functionalities.
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Affiliation(s)
- Nils Bäumer
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
| | - Jonas Matern
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
| | - Gustavo Fernández
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
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18
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Sarkar S, Sarkar A, Som A, Agasti SS, George SJ. Stereoselective Primary and Secondary Nucleation Events in Multicomponent Seeded Supramolecular Polymerization. J Am Chem Soc 2021; 143:11777-11787. [PMID: 34308651 DOI: 10.1021/jacs.1c05642] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Bioinspired, kinetically controlled seeded growth has been recently shown to provide length, dispersity, and sequence control on the primary structure of dynamic supramolecular polymers. However, command over the molecular organization at all hierarchical levels for the modulation of higher order structures of supramolecular polymers remains a formidable task. In this context, a surface-catalyzed secondary nucleation process, which plays an important role in the autocatalytic generation of amyloid fibrils and also during the chiral crystallization of small monomers, offers exciting possibilities for topology control in synthetic macromolecular systems by introducing secondary growth pathways compared to the usual primary nucleation-elongation process. However, mechanistic insights into the molecular determinants and driving forces for the secondary nucleation event in synthetic systems are not yet realized. Herein, we attempt to fill this dearth by showing an unprecedented molecular chirality control on the primary and secondary nucleation events in seed-induced supramolecular polymerization. Comprehensive kinetic experiments using in situ spectroscopic probing of the temporal changes of the monomer organization during the growth process provide a unique study to characterize the primary and secondary nucleation events in a supramolecular polymerization process. Kinetic analyses along with various microscopic studies further reveal the remarkable effect of stereoselective nucleation and seeding events on the (micro)structural aspects of the resulting multicomponent supramolecular polymers.
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Affiliation(s)
- Souvik Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Aritra Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Arka Som
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Sarit S Agasti
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Subi J George
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
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19
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Tamaki K, Aizawa T, Yagai S. Wavy supramolecular polymers formed by hydrogen-bonded rosettes. Chem Commun (Camb) 2021; 57:4779-4782. [PMID: 33949513 DOI: 10.1039/d1cc01636a] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A barbiturate-functionalized supramolecular monomer bearing an ester-linked biphenyl and azobenzene π-conjugated core affords wavy supramolecular polymers. The periodic inversion of curvature is due to the conformational rigidity of the monomer and repulsive interactions between rosettes. Photoisomerization of the azobenzene moiety increases the fragility of the main chain without deteriorating its periodic structure.
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Affiliation(s)
- Kenta Tamaki
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Takumi Aizawa
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Shiki Yagai
- Institute for Global Prominent Research (IGPR), Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan. and Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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20
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Matern J, Bäumer N, Fernández G. Unraveling Halogen Effects in Supramolecular Polymerization. J Am Chem Soc 2021; 143:7164-7175. [PMID: 33913728 DOI: 10.1021/jacs.1c02384] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Halogens play a crucial role in numerous natural processes and synthetic materials due to their unique physicochemical properties and the diverse interactions they can engage in. In the field of supramolecular polymerization, however, halogen effects remain poorly understood, and investigations have been restricted to halogen bonding or the inclusion of polyfluorinated side groups. Recent contributions from our group have revealed that chlorine ligands greatly influence molecular packing and pathway complexity phenomena of various metal complexes. These results prompted us to explore the role of the halogen nature on supramolecular polymerization, a phenomenon that has remained unexplored to date. To address this issue, we have designed a series of archetypal bispyridyldihalogen PtII complexes bearing chlorine (1), bromine (2), or iodine (3) and systematically compared their supramolecular polymerization in nonpolar media using various experimental methods and theory. Our studies reveal a remarkably different supramolecular polymerization for the three compounds, which can undergo two competing pathways with either slipped (kinetic) or parallel (thermodynamic) molecular packing. The halogen exerts an inverse effect on the energetic levels of the two self-assembled states, resulting in a single thermodynamic pathway for 3, a transient kinetic species for 2, and a hidden thermodynamic state for 1. This seesaw-like bias of the energy landscape can be traced back to the involvement of the halogens in weak N-H···X hydrogen-bonding interactions in the kinetic pathway, whereas in the thermodynamic pathway the halogens are not engaged in the stabilizing interaction motif but rather amplify solvophobic effects.
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Affiliation(s)
- Jonas Matern
- Organisch-Chemisches Institut, Universität Münster, Corrensstraße 36, 48149 Münster, Germany
| | - Nils Bäumer
- Organisch-Chemisches Institut, Universität Münster, Corrensstraße 36, 48149 Münster, Germany
| | - Gustavo Fernández
- Organisch-Chemisches Institut, Universität Münster, Corrensstraße 36, 48149 Münster, Germany
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21
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Xu F, Pfeifer L, Crespi S, Leung FKC, Stuart MCA, Wezenberg SJ, Feringa BL. From Photoinduced Supramolecular Polymerization to Responsive Organogels. J Am Chem Soc 2021; 143:5990-5997. [PMID: 33830767 PMCID: PMC8154511 DOI: 10.1021/jacs.1c01802] [Citation(s) in RCA: 50] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Indexed: 12/30/2022]
Abstract
Controlling supramolecular polymerization by external stimuli holds great potential toward the development of responsive soft materials and manipulating self-assembly at the nanoscale. Photochemical switching offers the prospect of regulating the structure and properties of systems in a noninvasive and reversible manner with spatial and temporal control. In addition, this approach will enhance our understanding of supramolecular polymerization mechanisms; however, the control of molecular assembly by light remains challenging. Here we present photoresponsive stiff-stilbene-based bis-urea monomers whose trans isomers readily form supramolecular polymers in a wide range of organic solvents, enabling fast light-triggered depolymerization-polymerization and reversible gel formation. Due to the stability of the cis isomers and the high photostationary states (PSS) of the cis-trans isomerization, precise control over supramolecular polymerization and in situ gelation could be achieved with short response times. A detailed study on the temperature-dependent and photoinduced supramolecular polymerization in organic solvents revealed a kinetically controlled nucleation-elongation mechanism. By application of a Volta phase plate to enhance the phase-contrast method in cryo-EM, unprecedented for nonaqueous solutions, uniform nanofibers were observed in organic solvents.
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Affiliation(s)
- Fan Xu
- Center for System Chemistry,
Stratingh Institute for Chemistry, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | | | - Stefano Crespi
- Center for System Chemistry,
Stratingh Institute for Chemistry, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | | | - Marc C. A. Stuart
- Center for System Chemistry,
Stratingh Institute for Chemistry, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | | | - Ben L. Feringa
- Center for System Chemistry,
Stratingh Institute for Chemistry, University
of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
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22
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Bäumer N, Kartha KK, Buss S, Maisuls I, Palakkal JP, Strassert CA, Fernández G. Tuning energy landscapes and metal-metal interactions in supramolecular polymers regulated by coordination geometry. Chem Sci 2021; 12:5236-5245. [PMID: 34168776 PMCID: PMC8179630 DOI: 10.1039/d1sc00416f] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Herein, we exploit coordination geometry as a new tool to regulate the non-covalent interactions, photophysical properties and energy landscape of supramolecular polymers. To this end, we have designed two self-assembled Pt(ii) complexes 1 and 2 that feature an identical aromatic surface, but differ in the coordination and molecular geometry (linear vs. V-shaped) as a result of judicious ligand choice (monodentate pyridine vs. bidentate bipyridine). Even though both complexes form cooperative supramolecular polymers in methylcyclohexane, their supramolecular and photophysical behaviour differ significantly: while the high preorganization of the bipyridine-based complex 1 enables an H-type 1D stacking with short Pt⋯Pt contacts via a two-step consecutive process, the existence of increased steric effects for the pyridyl-based derivative 2 hinders the formation of metal–metal contacts and induces a single aggregation process into large bundles of fibers. Ultimately, this fine control of Pt⋯Pt distances leads to tuneable luminescence—red for 1vs. blue for 2, which highlights the relevance of coordination geometry for the development of functional supramolecular materials. In this article, we exploit coordination geometry as a new tool to control the energy landscape and photophysical properties (red vs. blue luminescence) of supramolecular polymers.![]()
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Affiliation(s)
- Nils Bäumer
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
| | - Kalathil K Kartha
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
| | - Stefan Buss
- CeNTech, CiMIC, SoN, Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster Heisenbergstraße 11 48149 Germany
| | - Iván Maisuls
- CeNTech, CiMIC, SoN, Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster Heisenbergstraße 11 48149 Germany
| | - Jasnamol P Palakkal
- Technische Universität Darmstadt, Department of Materials and Earth Sciences Alarich-Weiss-Straße 2 64287 Darmstadt Germany
| | - Cristian A Strassert
- CeNTech, CiMIC, SoN, Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster Heisenbergstraße 11 48149 Germany
| | - Gustavo Fernández
- Organisch-Chemisches Institut, Westfälische Wilhelms-Universität Münster Corrensstraße 36 48149 Münster Germany
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23
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Orvay F, Cerdá J, Rotger C, Ortí E, Aragó J, Costa A, Soberats B. Influence of the Z/E Isomerism on the Pathway Complexity of a Squaramide-Based Macrocycle. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2021; 17:e2006133. [PMID: 33448095 DOI: 10.1002/smll.202006133] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 11/25/2020] [Indexed: 05/25/2023]
Abstract
The rising interest on pathway complexity in supramolecular polymerization has prompted the finding of novel monomer designs able to stabilize kinetically trapped species and generate supramolecular polymorphs. In the present work, the exploitation of the Z/E (geometrical) isomerism of squaramide (SQ) units to produce various self-assembled isoforms and complex supramolecular polymerization pathways in methylcyclohexane/CHCl3 mixtures is reported for the first time. This is achieved by using a new bissquaramidic macrocycle (MSq) that self-assembles into two markedly different thermodynamic aggregates, AggA (discrete cyclic structures) and AggB (fibrillar structures), depending on the solvent composition and concentration. Remarkably, UV-vis, 1 H NMR, and FT-IR experiments together with quantum-chemical calculations indicate that these two distinct aggregates are formed via two different hydrogen bonding patterns (side-to-side in AggA and head-to-tail in AggB) due to different conformations in the SQ units (Z,E in AggA and Z,Z in AggB). The ability of MSq to supramolecularly polymerize into two distinct aggregates is utilized to induce the kinetic-to-thermodynamic transformation from AggA to AggB, which occurs via an on-pathway mechanism. It is believed that this system provides new insights for the design of potential supramolecular polymorphic materials by using squaramide units.
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Affiliation(s)
- Francisca Orvay
- Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122, Spain
| | - Jesús Cerdá
- Instituto de Ciencia Molecular, Universidad de Valencia, Paterna, 46980, Spain
| | - Carmen Rotger
- Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122, Spain
| | - Enrique Ortí
- Instituto de Ciencia Molecular, Universidad de Valencia, Paterna, 46980, Spain
| | - Juan Aragó
- Instituto de Ciencia Molecular, Universidad de Valencia, Paterna, 46980, Spain
| | - Antonio Costa
- Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122, Spain
| | - Bartolome Soberats
- Department of Chemistry, University of the Balearic Islands, Cra. Valldemossa, Km. 7.5, Palma de Mallorca, 07122, Spain
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24
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Yin G, Kandapal S, Liu C, Wang H, Huang J, Jiang S, Ji T, Yan Y, Khalife S, Zhou R, Ye L, Xu B, Yang H, Nieh M, Li X. Metallo‐Helicoid with Double Rims: Polymerization Followed by Folding by Intramolecular Coordination. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202010696] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Guang‐Qiang Yin
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen Guangdong 518055 China
| | - Sneha Kandapal
- Single Molecule Study Laboratory College of Engineering and Nanoscale Science and Engineering Center University of Georgia Athens GA 30602 USA
| | - Chung‐Hao Liu
- Department of Chemical and Biomolecular Engineering University of Connecticut Storrs CT 06269 USA
| | - Heng Wang
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen Guangdong 518055 China
| | - Jianxiang Huang
- Institute of Quantitative Biology Zhejiang University Hangzhou Zhejiang 310027 China
| | - Shu‐Ting Jiang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Tan Ji
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Yu Yan
- Department of Chemistry University of South Florida Tampa FL 33620 USA
| | - Sandra Khalife
- Department of Chemistry University of South Florida Tampa FL 33620 USA
| | - Ruhong Zhou
- Institute of Quantitative Biology Zhejiang University Hangzhou Zhejiang 310027 China
| | - Libin Ye
- Department of Cell Biology, Microbiology and Molecular Biology University of South Florida Tampa FL 33620 USA
| | - Bingqian Xu
- Single Molecule Study Laboratory College of Engineering and Nanoscale Science and Engineering Center University of Georgia Athens GA 30602 USA
| | - Hai‐Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes Department of Chemistry East China Normal University Shanghai 200062 China
| | - Mu‐Ping Nieh
- Department of Chemical and Biomolecular Engineering University of Connecticut Storrs CT 06269 USA
- Polymer Program Institute of Material Science University of Connecticut Storrs CT 06269 USA
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering Shenzhen University Shenzhen Guangdong 518055 China
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25
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Yin GQ, Kandapal S, Liu CH, Wang H, Huang J, Jiang ST, Ji T, Yan Y, Khalife S, Zhou R, Ye L, Xu B, Yang HB, Nieh MP, Li X. Metallo-Helicoid with Double Rims: Polymerization Followed by Folding by Intramolecular Coordination. Angew Chem Int Ed Engl 2020; 60:1281-1289. [PMID: 33009693 DOI: 10.1002/anie.202010696] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Revised: 09/14/2020] [Indexed: 11/08/2022]
Abstract
In this study, we established a feasible strategy to construct a new type of metallo-polymer with helicoidal structure through the combination of covalent polymerization and intramolecular coordination-driven self-assembly. In the design, a tetratopic monomer (M) was prepared with two terminal alkynes in the outer rim for polymerization, and two terpyridines (TPYs) in the inner rim for subsequent folding by selective intramolecular coordination. Then, the linear covalent polymer (P) was synthesized by polymerization of M via Glaser-Hay homocoupling reaction. Finally, intramolecular coordination interactions between TPYs and Zn(II) folded the backbone of P into a right- or left-handed metallo-helicoid (H) with double rims. Owing to multiple positive charges on the inner rim of helicoid, double-stranded DNA molecules (dsDNA) could interact with H through electrostatic interactions. Remarkably, dsDNA allowed exclusive formation of H with right handedness by means of chiral induction.
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Affiliation(s)
- Guang-Qiang Yin
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Sneha Kandapal
- Single Molecule Study Laboratory, College of Engineering and Nanoscale Science and Engineering Center, University of Georgia, Athens, GA, 30602, USA
| | - Chung-Hao Liu
- Department of Chemical and Biomolecular Engineering, University of Connecticut, Storrs, CT, 06269, USA
| | - Heng Wang
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong, 518055, China
| | - Jianxiang Huang
- Institute of Quantitative Biology, Zhejiang University, Hangzhou, Zhejiang, 310027, China
| | - Shu-Ting Jiang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai, 200062, China
| | - Tan Ji
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai, 200062, China
| | - Yu Yan
- Department of Chemistry, University of South Florida, Tampa, FL, 33620, USA
| | - Sandra Khalife
- Department of Chemistry, University of South Florida, Tampa, FL, 33620, USA
| | - Ruhong Zhou
- Institute of Quantitative Biology, Zhejiang University, Hangzhou, Zhejiang, 310027, China
| | - Libin Ye
- Department of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, 33620, USA
| | - Bingqian Xu
- Single Molecule Study Laboratory, College of Engineering and Nanoscale Science and Engineering Center, University of Georgia, Athens, GA, 30602, USA
| | - Hai-Bo Yang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, Department of Chemistry, East China Normal University, Shanghai, 200062, China
| | - Mu-Ping Nieh
- Department of Chemical and Biomolecular Engineering, University of Connecticut, Storrs, CT, 06269, USA.,Polymer Program, Institute of Material Science, University of Connecticut, Storrs, CT, 06269, USA
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong, 518055, China
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26
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Tamaki K, Datta S, Tashiro K, Isobe A, Silly F, Yagai S. Effect of Azobenzene Regioisomerism on Intrinsically Curved Supramolecular Polymers. ASIAN J ORG CHEM 2020. [DOI: 10.1002/ajoc.202000535] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Kenta Tamaki
- Division of Advanced Science and Engineering Graduate School of Science and Engineering Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Sougata Datta
- Department of Applied Chemistry and Biotechnology Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Keigo Tashiro
- Institute for Global Prominent Research (IGPR) Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Atsushi Isobe
- Division of Advanced Science and Engineering Graduate School of Science and Engineering Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Fabien Silly
- TITANS SPEC CEA CNRS Université Paris-Saclay CEA Saclay F-91191 Gif sur Yvette France
| | - Shiki Yagai
- Institute for Global Prominent Research (IGPR) Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
- Department of Applied Chemistry and Biotechnology Chiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
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27
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Sarkar S, Sarkar A, George SJ. Stereoselective Seed‐Induced Living Supramolecular Polymerization. Angew Chem Int Ed Engl 2020; 59:19841-19845. [DOI: 10.1002/anie.202006248] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Revised: 06/11/2020] [Indexed: 11/12/2022]
Affiliation(s)
- Souvik Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Aritra Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Subi J. George
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
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28
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Sarkar S, Sarkar A, George SJ. Stereoselective Seed‐Induced Living Supramolecular Polymerization. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006248] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Souvik Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Aritra Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Subi J. George
- New Chemistry Unit and School of Advanced Materials (SAMat) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
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29
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Athiyarath V, Sureshan KM. Designed Synthesis of a 1D Polymer in Twist-Stacked Topology via Single-Crystal-to-Single-Crystal Polymerization. Angew Chem Int Ed Engl 2020; 59:15580-15585. [PMID: 32779302 DOI: 10.1002/anie.202006758] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 06/05/2020] [Indexed: 12/16/2022]
Abstract
To synthesize a fully organic 1D polymer in a novel twist-stacked topology, we designed a peptide monomer HC≡CCH2 -NH-Ile-Leu-N3 , which crystallizes with its molecules H-bonded along a six-fold screw axis. These H-bonded columns pack parallelly such that molecules arrange head-to-tail, forming linear non-covalent chains in planes perpendicular to the screw axis. The chains arrange parallelly to form molecular layers which twist-stack along the screw axis. Crystals of this monomer, on heating, undergo single-crystal-to-single-crystal (SCSC) topochemical azide-alkyne cycloaddition (TAAC) polymerization to yield an exclusively 1,4-triazole-linked polymer in a twist-stacked layered topology. This topologically defined polymer shows better mechanical strength and thermal stability than its unordered form, as evidenced by nanoindentation studies and thermogravimetric analysis, respectively. This work illustrates the scope of topochemical polymerizations for synthesizing polymers in pre-decided topologies.
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Affiliation(s)
- Vignesh Athiyarath
- School of Chemistry, Indian Institute of Science Education and Research, Thiruvananthapuram, Kerala, 695551, India
| | - Kana M Sureshan
- School of Chemistry, Indian Institute of Science Education and Research, Thiruvananthapuram, Kerala, 695551, India
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30
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Athiyarath V, Sureshan KM. Designed Synthesis of a 1D Polymer in Twist‐Stacked Topology via Single‐Crystal‐to‐Single‐Crystal Polymerization. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006758] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Vignesh Athiyarath
- School of Chemistry Indian Institute of Science Education and Research Thiruvananthapuram Kerala 695551 India
| | - Kana M. Sureshan
- School of Chemistry Indian Institute of Science Education and Research Thiruvananthapuram Kerala 695551 India
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31
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Supramolecular double-stranded Archimedean spirals and concentric toroids. Nat Commun 2020; 11:3578. [PMID: 32681045 PMCID: PMC7368029 DOI: 10.1038/s41467-020-17356-5] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 06/23/2020] [Indexed: 02/06/2023] Open
Abstract
Connecting molecular-level phenomena to larger scales and, ultimately, to sophisticated molecular systems that resemble living systems remains a considerable challenge in supramolecular chemistry. To this end, molecular self-assembly at higher hierarchical levels has to be understood and controlled. Here, we report unusual self-assembled structures formed from a simple porphyrin derivative. Unexpectedly, this formed a one-dimensional (1D) supramolecular polymer that coiled to give an Archimedean spiral. Our analysis of the supramolecular polymerization by using mass-balance models suggested that the Archimedean spiral is formed at high concentrations of the monomer, whereas other aggregation types might form at low concentrations. Gratifyingly, we discovered that our porphyrin-based monomer formed supramolecular concentric toroids at low concentrations. Moreover, a mechanistic insight into the self-assembly process permitted a controlled synthesis of these concentric toroids. This study both illustrates the richness of self-assembled structures at higher levels of hierarchy and demonstrates a topological effect in noncovalent synthesis. Connecting molecular-level phenomena to larger scales and molecular systems that resemble living systems remains a considerable challenge in supramolecular chemistry. Here, the authors report different self-assembly patterns in a porphyrin structure which can form – depending on the concentration - spirals or toroids.
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32
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Datta S, Kato Y, Higashiharaguchi S, Aratsu K, Isobe A, Saito T, Prabhu DD, Kitamoto Y, Hollamby MJ, Smith AJ, Dalgliesh R, Mahmoudi N, Pesce L, Perego C, Pavan GM, Yagai S. Self-assembled poly-catenanes from supramolecular toroidal building blocks. Nature 2020; 583:400-405. [PMID: 32669695 DOI: 10.1038/s41586-020-2445-z] [Citation(s) in RCA: 155] [Impact Index Per Article: 38.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Accepted: 05/19/2020] [Indexed: 12/24/2022]
Abstract
Mechanical interlocking of molecules (catenation) is a nontrivial challenge in modern synthetic chemistry and materials science1,2. One strategy to achieve catenation is the design of pre-annular molecules that are capable of both efficient cyclization and of pre-organizing another precursor to engage in subsequent interlocking3-9. This task is particularly difficult when the annular target is composed of a large ensemble of molecules, that is, when it is a supramolecular assembly. However, the construction of such unprecedented assemblies would enable the visualization of nontrivial nanotopologies through microscopy techniques, which would not only satisfy academic curiosity but also pave the way to the development of materials with nanotopology-derived properties. Here we report the synthesis of such a nanotopology using fibrous supramolecular assemblies with intrinsic curvature. Using a solvent-mixing strategy, we kinetically organized a molecule that can elongate into toroids with a radius of about 13 nanometres. Atomic force microscopy on the resulting nanoscale toroids revealed a high percentage of catenation, which is sufficient to yield 'nanolympiadane'10, a nanoscale catenane composed of five interlocked toroids. Spectroscopic and theoretical studies suggested that this unusually high degree of catenation stems from the secondary nucleation of the precursor molecules around the toroids. By modifying the self-assembly protocol to promote ring closure and secondary nucleation, a maximum catenation number of 22 was confirmed by atomic force microscopy.
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Affiliation(s)
- Sougata Datta
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba, Japan
| | - Yasuki Kato
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan
| | - Seiya Higashiharaguchi
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan
| | - Keisuke Aratsu
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan
| | - Atsushi Isobe
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan
| | - Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan
| | - Deepak D Prabhu
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba, Japan
| | - Yuichi Kitamoto
- Institute for Global Prominent Research (IGPR), Chiba University, Chiba, Japan
| | - Martin J Hollamby
- School of Chemical and Physical Sciences, Keele University, Keele, UK
| | | | - Robert Dalgliesh
- ISIS Pulsed Neutron and Muon Source, Rutherford Appleton Laboratory, Chilton, UK
| | - Najet Mahmoudi
- ISIS Pulsed Neutron and Muon Source, Rutherford Appleton Laboratory, Chilton, UK
| | - Luca Pesce
- Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Manno, Switzerland
| | - Claudio Perego
- Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Manno, Switzerland
| | - Giovanni M Pavan
- Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Manno, Switzerland.,Department Applied Science and Techology, Politecnico di Torino, Turin, Italy
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University, Chiba, Japan. .,Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, Chiba, Japan. .,Institute for Global Prominent Research (IGPR), Chiba University, Chiba, Japan.
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33
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Matern J, Kartha KK, Sánchez L, Fernández G. Consequences of hidden kinetic pathways on supramolecular polymerization. Chem Sci 2020; 11:6780-6788. [PMID: 32874522 PMCID: PMC7450716 DOI: 10.1039/d0sc02115f] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 06/01/2020] [Indexed: 12/12/2022] Open
Abstract
In recent years, the development of sophisticated analytical tools, kinetic models and sample preparation methods has significantly advanced the field of supramolecular polymerization, where the competition of kinetic vs. thermodynamic processes has become commonplace for a wide range of building blocks. Typically, the kinetic pathways are identified in thermally controlled assembly experiments before they ultimately evolve to the thermodynamic minimum. However, there might be cases where the identification and thus the assessment of the influence of kinetic aggregates is not trivial, making the analysis of the self-assembly processes a hard task. Herein, we demonstrate that "hidden" kinetic pathways can have drastic consequences on supramolecular polymerization processes, to the point that they can even overrule thermodynamic implications. To this end, we analyzed in detail the supramolecular polymerization of a chiral PdII complex 1 that forms two competing aggregates (Agg I and Agg II) of which kinetic Agg II is formed through a "hidden" pathway, i.e. this pathway is not accessible by common thermal polymerization protocols. The hidden pathway exhibits two consecutive steps: first, Agg II is formed in a cooperative process, which subsequently evolves to clustered superstructures driven by rapid kinetics. At standard conditions, Agg II displays an extraordinary kinetic stability (>6 months), which could be correlated to its cooperative mechanism suppressing nucleation of thermodynamic Agg I. Furthermore, the fast kinetics of cluster formation sequester monomers from the equilibria in solution and prevents the system from relaxing into the thermodynamic minimum, thus highlighting the key implications of hidden pathways in governing supramolecular polymerization processes.
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Affiliation(s)
- Jonas Matern
- Organisch-Chemisches Institut , Westfälische Wilhelms-Universität Münster , Corrensstraße 36 , 48149 Münster , Germany .
| | - Kalathil K Kartha
- Organisch-Chemisches Institut , Westfälische Wilhelms-Universität Münster , Corrensstraße 36 , 48149 Münster , Germany .
| | - Luis Sánchez
- Departamento de Química Orgánica , Facultad de Ciencias Químicas, Universidad Complutense de Madrid , Ciudad Universitaria s/n , 28040 Madrid , Spain
| | - Gustavo Fernández
- Organisch-Chemisches Institut , Westfälische Wilhelms-Universität Münster , Corrensstraße 36 , 48149 Münster , Germany .
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34
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Isobe A, Prabhu DD, Datta S, Aizawa T, Yagai S. Effect of an Aromatic Solvent on Hydrogen‐Bond‐Directed Supramolecular Polymerization Leading to Distinct Topologies. Chemistry 2020; 26:8997-9004. [DOI: 10.1002/chem.202001344] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Revised: 04/28/2020] [Indexed: 12/22/2022]
Affiliation(s)
- Atsushi Isobe
- Division of Advanced Science and EngineeringGraduate School of EngineeringChiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Deepak D. Prabhu
- Graduate School of EngineeringChiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Sougata Datta
- Graduate School of EngineeringChiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Takumi Aizawa
- Division of Advanced Science and EngineeringGraduate School of EngineeringChiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
| | - Shiki Yagai
- Graduate School of EngineeringChiba University 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
- Institute for Global Prominent Research (IGPR) 1-33 Yayoi-cho Inage-ku Chiba 263-8522 Japan
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35
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Saito T, Yagai S. Effect of Oligoethylene Chains on the Formation of Photoresponsive Nanotubes by Azobenzene Dyad. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000019] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Takuho Saito
- Division of Advanced Science and Engineering; Graduate school of Science and Engineering; Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
| | - Shiki Yagai
- Division of Advanced Science and Engineering; Graduate school of Science and Engineering; Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
- Institute for Global Prominent Research (IGPR); Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
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36
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Aratsu K, Shimizu N, Takagi H, Haruki R, Adachi SI, Yagai S. Effect of Solvent on the Thermodynamic Stability of Toroidal Supramolecular Polymers. CHEM LETT 2020. [DOI: 10.1246/cl.190789] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Keisuke Aratsu
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Nobutaka Shimizu
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba, Ibaraki 305-0801, Japan
| | - Hideaki Takagi
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba, Ibaraki 305-0801, Japan
| | - Rie Haruki
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba, Ibaraki 305-0801, Japan
| | - Shin-ichi Adachi
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba, Ibaraki 305-0801, Japan
| | - Shiki Yagai
- Institute for Global Prominent Research (IGPR), Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
- Graduate School of Engineering, Chiba University, 1-33 Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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37
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Aizawa T, Aratsu K, Datta S, Mashimo T, Seki T, Kajitani T, Silly F, Yagai S. Hydrogen bond-directed supramolecular polymorphism leading to soft and hard molecular ordering. Chem Commun (Camb) 2020; 56:4280-4283. [DOI: 10.1039/d0cc01636e] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Transformation of metastable supramolecular stacks of hydrogen-bonded rosettes composed of an ester-containing barbiturated naphthalene into crystalline nanosheets occurs through the rearrangement of hydrogen-bonding patterns.
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Affiliation(s)
- Takumi Aizawa
- Division of Advanced Science and Engineering
- Graduate School of Science and Engineering
- Chiba University
- Chiba 263-85223
- Japan
| | - Keisuke Aratsu
- Division of Advanced Science and Engineering
- Graduate School of Science and Engineering
- Chiba University
- Chiba 263-85223
- Japan
| | - Sougata Datta
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering
- Chiba University
- Chiba 263-8522
- Japan
| | - Takaki Mashimo
- Division of Applied Chemistry and Frontier Chemistry Center (FCC) Faculty of Engineering
- Hokkaido University
- Sapporo
- Japan
| | - Tomohiro Seki
- Division of Applied Chemistry and Frontier Chemistry Center (FCC) Faculty of Engineering
- Hokkaido University
- Sapporo
- Japan
| | - Takashi Kajitani
- Suzukakedai Materials Analysis Division
- Technical Department
- Tokyo Institute of Technology
- Yokohama 226-8503
- Japan
| | | | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering
- Chiba University
- Chiba 263-8522
- Japan
- Institute for Global Prominent Research (IGPR)
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38
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Abstract
Reversible helical polymerization of toroids with rapid response to heating–cooling cycles and helicity control in the presence of a chiral regulator.
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Affiliation(s)
- Bowen Shen
- State Key Laboratory of Supramolecular Structure and Materials
- College of Chemistry
- Jilin University
- Changchun 130012
- China
| | - Myongsoo Lee
- State Key Laboratory of Supramolecular Structure and Materials
- College of Chemistry
- Jilin University
- Changchun 130012
- China
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