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Golczak A, Prukała D, Sikorska E, Gierszewski M, Cherkas V, Kwiatek D, Kubiak A, Varma N, Pędziński T, Murphree S, Cibulka R, Mrówczyńska L, Kolanowski JL, Sikorski M. Tetramethylalloxazines as efficient singlet oxygen photosensitizers and potential redox-sensitive agents. Sci Rep 2023; 13:13426. [PMID: 37591918 PMCID: PMC10435492 DOI: 10.1038/s41598-023-40536-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 08/12/2023] [Indexed: 08/19/2023] Open
Abstract
Tetramethylalloxazines (TMeAll) have been found to have a high quantum yield of singlet oxygen generation when used as photosensitizers. Their electronic structure and transition energies (S0 → Si, S0 → Ti, T1 → Ti) were calculated using DFT and TD-DFT methods and compared to experimental absorption spectra. Generally, TMeAll display an energy diagram similar to other derivatives belonging to the alloxazine class of compounds, namely π,π* transitions are accompanied by closely located n,π* transitions. Photophysical data such as quantum yields of fluorescence, fluorescence lifetimes, and nonradiative rate constants were also studied in methanol (MeOH), acetonitrile (ACN), and 1,2-dichloroethane (DCE). The transient absorption spectra were also analyzed. To assess cytotoxicity of new compounds, a hemolytic assay was performed using human red blood cells (RBC) in vitro. Subsequently, fluorescence lifetime imaging experiments (FLIM) were performed on RBC under physiological and oxidative stress conditions alone or in the presence of TMeAll allowing for pinpointing changes caused by those compounds on the intracellular environment of these cells.
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Affiliation(s)
- Anna Golczak
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland
| | - Dorota Prukała
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland
| | - Ewa Sikorska
- Poznań University of Economics and Business, Al. Niepodległości 10, 61-875, Poznan, Poland
| | - Mateusz Gierszewski
- Faculty of Physics, Adam Mickiewicz University, Uniwersytetu Poznańskiego 2, 61-614, Poznan, Poland
| | - Volodymyr Cherkas
- Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland
| | - Dorota Kwiatek
- Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland
| | - Adam Kubiak
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland
| | - Naisargi Varma
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland
| | - Tomasz Pędziński
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland
| | - Shaun Murphree
- Department of Chemistry, Allegheny College, 520 N. Main Street, Meadville, PA, USA
| | - Radek Cibulka
- Department of Organic Chemistry, University of Chemistry and Technology, Prague, Technicka 5, 16628, Prague 6, Czech Republic.
| | - Lucyna Mrówczyńska
- Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznańskiego 6, 61-614, Poznan, Poland.
| | - Jacek Lukasz Kolanowski
- Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.
| | - Marek Sikorski
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, 61-614, Poznan, Poland.
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2
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Ghosh S, Puranik M. Initial Excited State Dynamics of Lumichrome upon Ultraviolet Excitation. Photochem Photobiol 2022; 98:1270-1283. [PMID: 35380739 DOI: 10.1111/php.13631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 04/01/2022] [Indexed: 11/29/2022]
Abstract
Lumichrome (LC) is the major photodegradation product of biologically important flavin cofactors. Since LC serves as a structural comparison to the flavins; understanding excited states of LC is fundamentally important to establish a connection with photophysics of different flavins, such as lumiflavin (LF), riboflavin (RF), flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). Herein, we deduce the initial excited state structural dynamics of LC using UV resonance Raman (UVRR) intensity analysis. The UVRR spectra at wavelengths across the 260 nm absorption band of LC were measured and resulting Raman excitation profiles and absorption spectrum were self consistently simulated using a time-dependent wave packet formalism to extract the initial excited state structural and solvent broadening parameters. These results are compared with those obtained for other flavins following UV excitations. We find that LC undergoes a very distinct instantaneous charge redistribution than flavins, which is attributed to the extended π-conjugation present in flavins but missing in LC. The homogeneous broadening linewidth of LC appears to be lower than that of LF, while the inhomogeneous broadening values are comparable, indicating greater solvent interaction with excited flavin on ultrafast timescale compared to LC, whereas on longer timescale these interactions are almost similar.
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Affiliation(s)
- Sudeb Ghosh
- Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune-411 008, India
| | - Mrinalini Puranik
- Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune-411 008, India
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3
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Jana R, Gautam RK, Bapli A, Seth D. Photodynamics of biological active flavin in the presence of zwitterionic surfactants. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 264:120304. [PMID: 34464918 DOI: 10.1016/j.saa.2021.120304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Revised: 08/16/2021] [Accepted: 08/17/2021] [Indexed: 06/13/2023]
Abstract
In the flavin family of photoactive biomolecules, lumichrome (LM) is a very important compound. It contains a tri-cyclic structure with methyl groups at two sides. It formed by the partial decomposition and biodegradation of riboflavin in both acidic as well as in neutral medium. Herein, we have studied the photophysical properties of LM in the presence of two zwitterionic surfactants, namely dodecyldimethyl(3-sulfopropyl) ammonium hydroxide inner salt (DSB), and tetradecyldimethyl(3-sulfopropyl) ammonium hydroxide inner salt (TSB), having the same head group but a different tail part. We have used steady-state absorption, fluorescence emission, and time-resolved fluorescence emission measurements. We observed that in the presence of zwitterionic surfactant aggregates LM shows excitation and emission wavelength dependent emission properties, which demonstrate the structural changes that take place from one form to another prototropic form of LM molecule. The higher rotational relaxation time of LM in the case of DSB compared to TSB demonstrated that LM is facing more rigid environment in DSB micelles compared to TSB micelles.
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Affiliation(s)
- Rabindranath Jana
- Department of Chemistry, Indian Institute of Technology Patna, Patna 801103, Bihar, India
| | - Rajesh Kumar Gautam
- Department of Chemistry, Indian Institute of Technology Patna, Patna 801103, Bihar, India
| | - Aloke Bapli
- Department of Chemistry, Indian Institute of Technology Patna, Patna 801103, Bihar, India
| | - Debabrata Seth
- Department of Chemistry, Indian Institute of Technology Patna, Patna 801103, Bihar, India.
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4
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Mal M, Mandal D. Double proton transfer in a polar nano-droplet: Phototautomerization of alloxazine in AOT/alkane reverse micelles containing water or glycerol. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 255:119708. [PMID: 33784597 DOI: 10.1016/j.saa.2021.119708] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2021] [Revised: 03/09/2021] [Accepted: 03/10/2021] [Indexed: 06/12/2023]
Abstract
Alloxazine phototautomerization is believed to occur through an excited state double proton transfer (ESDPT) mechanism involving cyclic intermolecular H-bonded complexes between Alloxazine and hydroxylic solvents like water and alcohols. In AOT/alkane dispersions in the absence of any polar liquid, Alloxazine molecules reside inside the polar core of the AOT reverse micelle nanoparticles, where they involve in H-bonding with the anionic sulfonate head-groups of the AOT molecules, but are unable to generate the appropriate cyclic intermolecular H-bonded complexes conducive to ESDPT. However, tautomerization is switched on with addition of water and formation ofwater nano-droplet at the core of reverse micelle. Evidently, the Alloxazine⋅⋅⋅⋅AOT H-bonds are now replaced by Alloxazine⋅⋅⋅⋅Water H-bonds, promotingESDPT. On the other hand, Alloxazine phototautomerization is hindered in Glycerol, irrespective of whether the latter is in the bulk liquid state or in the form of a polar nano-droplet. This may be explained by steric considerations.
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Affiliation(s)
- Madhushree Mal
- Department of Chemistry, University of Calcutta, 92, APC Road, Kolkata 700009, India
| | - Debabrata Mandal
- Department of Chemistry, University of Calcutta, 92, APC Road, Kolkata 700009, India.
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5
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Guo H, Ma X, Lei Z, Qiu Y, Zhao J, Dick B. Photophysical properties of N-methyl and N-acetyl substituted alloxazines: a theoretical investigation. Phys Chem Chem Phys 2021; 23:13734-13744. [PMID: 34128506 DOI: 10.1039/d1cp01201k] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The electronic structure and photophysical properties of a series of N-methyl and N-acetyl substituted alloxazines (AZs) were investigated with extensive density functional theory (DFT) and time-dependent density functional theory (TD-DFT) based calculations. We showed that non-radiative decays from the lowest singlet and triplet excited states of these AZs are dominant over their radiative counterparts. The fast non-radiative decays of the excited AZs can be attributed to the energy consumption (Ereorg) through structural reorganization facilitated by the intrinsic normal modes of the alloxazine framework, as well as their coupling with those of the functional groups. Substitution with functional groups may lead to further perturbation of the electronic structure of the AZ chromophore, which may enhance intersystem crossing with the ππ* states of the AZs. Due to the different bonding of N1 and N3 within the alloxazine framework, substitution may result in AZs with different photophysical properties. Specifically, functionalization at N1 may help in maintaining or even reducing Ereorg and would promote the absorption and radiative decay from the excited AZs. However, the strong coupling of the vibrational modes of acetyl at N3 with the intrinsic normal modes of the alloxazine framework would contribute significantly to Ereorg, and benefit the non-radiative decay of the excited AZs. We expect that the findings would pave the way for rational design of novel AZs with extraordinary photophysical properties.
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Affiliation(s)
- Huimin Guo
- State Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian, 116024, P. R. China.
| | - Xiaolin Ma
- State Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian, 116024, P. R. China.
| | - Zhiwen Lei
- State Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian, 116024, P. R. China.
| | - Yang Qiu
- State Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian, 116024, P. R. China.
| | - Jianzhang Zhao
- State Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian, 116024, P. R. China.
| | - Bernhard Dick
- Institut für Physikalische und Theoretische Chemie, Universität Regensburg, Universitätsstr. 31, Regensburg, 93053, Germany
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6
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7
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8
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Sinha S, Gharat PM, Pal H, Dutta Choudhury S. Lumichrome tautomerism in alcohol-water mixtures: Effect of carbon chain length and mole fraction of alcohols. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113621] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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9
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Guo H, Xia H, Ma X, Chen K, Dang C, Zhao J, Dick B. Efficient Photooxidation of Sulfides with Amidated Alloxazines as Heavy-atom-free Photosensitizers. ACS OMEGA 2020; 5:10586-10595. [PMID: 32426617 PMCID: PMC7227068 DOI: 10.1021/acsomega.0c01087] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 04/16/2020] [Indexed: 06/11/2023]
Abstract
Photooxidation utilizing visible light, especially with naturally abundant O2 as the oxygen source, has been well-accepted as a sustainable and efficient procedure in organic synthesis. To ensure the intersystem crossing and triplet quantum yield for efficient photosensitization, we prepared amidated alloxazines (AAs) and investigated their photophysical properties and performance as heavy-atom-free triplet photosensitizers and compared with those of flavin (FL) and riboflavin tetraacetate (RFTA). Because of the difference in the framework structure of AAs and FL and the introduction of carbonyl moiety, the absorption of FL at ∼450 nm is blue-shifted to ∼380 nm and weakened (ε = 8.7 × 103 for FL to ∼6.8 × 103 M-1 cm-1), but the absorption at ∼340 nm is red-shifted to ∼350 nm and enhanced by ∼50% (from ε = 6.4 × 103 for FL to ∼9.9 × 103 M-1 cm-1) in AAs. The intersystem crossing rates from the S1 to T1 are also enhanced in these AAs derivatives, while the fluorescence quantum yield decreases from ∼30 to ∼7% for FL and AAs, respectively, making the triplet excited state lifetime and the singlet oxygen quantum yield of AAs at least comparable to those of FL and RFTA. We examined the performance of these heave-atom-free chromophores in the photooxidation of sulfides to afford sulfoxides. In accordance with the prolonged triplet excited state lifetime and enhanced triplet quantum yield, 2-5-fold performance enhancements were observed for AAs in the photooxidation of sulfides with respect to FL. We proposed that the key reactive oxygen species of AA-sensitized photooxidation are singlet oxygen and superoxide radical anion based on mechanistic investigations. The research highlights the superior performance of AAs in photocatalysis and would be helpful to rationalize the design of efficient heavy-atom-free organic photocatalysts.
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Affiliation(s)
- Huimin Guo
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Hongyu Xia
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Xiaolin Ma
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Kepeng Chen
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Can Dang
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Jianzhang Zhao
- State
Key Laboratory of Fine Chemicals, Department of Chemistry, Dalian University of Technology, No. 2, Linggong Road, Dalian 116024, P. R. China
| | - Bernhard Dick
- Institut
für Physikalische und Theoretische Chemie, Universität Regensburg, Universitätsstr. 31, Regensburg 93053, Germany
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10
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Ye S, Tan J, Tian K, Li C, Zhang J, Luo Y. Directly monitoring the active sites of charge transfer in heterocycles in situ and in real time. Chem Commun (Camb) 2019; 55:541-544. [PMID: 30556076 DOI: 10.1039/c8cc08452a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Coherent degenerate infrared-infrared-visible sum frequency generation vibrational spectroscopy provides a powerful label-free sensitive probe for charge transfer active sites in heterocyclic molecules in situ and in real time.
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Affiliation(s)
- Shuji Ye
- Hefei National Laboratory for Physical Sciences at the Microscale, and Synergetic Innovation Center for Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.
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11
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Ren G, Meng Q, Zhao J, Chu T. Molecular Design for Electron-Driven Double-Proton Transfer: A New Scenario for Excited-State Proton-Coupled Electron Transfer. J Phys Chem A 2018; 122:9191-9198. [DOI: 10.1021/acs.jpca.8b09264] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Guanghua Ren
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, PR China
- University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Qingchi Meng
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, PR China
- University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Jinfeng Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, PR China
| | - Tianshu Chu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, PR China
- Institute for Computational Sciences and Engineering, Laboratory of New Fiber Material and Modern Textile, the Growing Base for State Key Laboratory, Qingdao University, Qingdao 266071, PR China
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12
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Bull JN, Carrascosa E, Giacomozzi L, Bieske EJ, Stockett MH. Ion mobility action spectroscopy of flavin dianions reveals deprotomer-dependent photochemistry. Phys Chem Chem Phys 2018; 20:19672-19681. [PMID: 30014081 PMCID: PMC6063075 DOI: 10.1039/c8cp03244k] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Photo-induced proton transfer, deprotomer-dependent photochemistry, and intramolecular charge transfer in flavin anions are investigated using action spectroscopy.
The intrinsic optical properties and photochemistry of flavin adenine dinucleotide (FAD) dianions are investigated using a combination of tandem ion mobility spectrometry and action spectroscopy. Two principal isomers are observed, the more stable form being deprotonated on the isoalloxazine group and a phosphate (N-3,PO4 deprotomer), and the other on the two phosphates (PO4,PO4 deprotomer). Ion mobility data and electronic action spectra suggest that photo-induced proton transfer occurs from the isoalloxazine group to a phosphate group, converting the PO4,PO4 deprotomer to the N-3,PO4 deprotomer. Comparisons of the isomer selective action spectra of FAD dianions and flavin monoanions with solution spectra and gas-phase photodissociation action spectra suggests that solvation shifts the electronic absorption of the deprotonated isoalloxazine group to higher energy. This is interpreted as evidence for significant charge transfer in the lowest optical transition of deprotonated isoalloxazine. Overall, this work demonstrates that the site of deprotonation of flavin anions strongly affects their electronic absorptions and photochemistry.
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Affiliation(s)
- James N Bull
- School of Chemistry, University of Melbourne, Melbourne, VIC 3010, Australia
| | - Eduardo Carrascosa
- School of Chemistry, University of Melbourne, Melbourne, VIC 3010, Australia
| | | | - Evan J Bieske
- School of Chemistry, University of Melbourne, Melbourne, VIC 3010, Australia
| | - Mark H Stockett
- School of Chemistry, University of Melbourne, Melbourne, VIC 3010, Australia and Department of Physics, Stockholm University, Stockholm, Sweden.
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13
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Tian B, Ding Z, Ning GH, Tang W, Peng C, Liu B, Su J, Su C, Loh KP. Amino group enhanced phenazine derivatives as electrode materials for lithium storage. Chem Commun (Camb) 2018; 53:2914-2917. [PMID: 28133663 DOI: 10.1039/c6cc09084b] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The development of organic molecule-based batteries is hampered by stability issues caused by the dissolution of the active organic materials in electrolytes. Herein, phenazine (PNZ) and 2,3-diaminophenazine (DAP) are investigated as organic electrode materials. The presence of amino functional groups in DAP dramatically enhances its electrochemical performances due to suppressed dissolution in the electrolyte.
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Affiliation(s)
- Bingbing Tian
- SZU-NUS Collaborative Innovation Center for Optoelectronic Science & Technology, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China. and Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Zijing Ding
- SZU-NUS Collaborative Innovation Center for Optoelectronic Science & Technology, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China. and Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Guo-Hong Ning
- Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Wei Tang
- Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Chengxin Peng
- Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Bo Liu
- Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Jie Su
- Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Chenliang Su
- SZU-NUS Collaborative Innovation Center for Optoelectronic Science & Technology, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China. and Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Kian Ping Loh
- SZU-NUS Collaborative Innovation Center for Optoelectronic Science & Technology, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China. and Department of Chemistry, Centre for Advanced 2D Materials (CA2DM), National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
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14
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Yang D, Yang G, Zhao J, Zheng R, Wang Y, Lv J. A theoretical assignment on excited-state intramolecular proton transfer mechanism for quercetin. J PHYS ORG CHEM 2017. [DOI: 10.1002/poc.3684] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Dapeng Yang
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
- State Key Laboratory of Molecular Reaction Dynamics, Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian 116023 China
| | - Guang Yang
- Department of Basic Science; Jiaozuo University; Jiaozuo 454000 China
| | - Jinfeng Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian 116023 China
| | - Rui Zheng
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
| | - Yusheng Wang
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
| | - Jian Lv
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
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15
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Dutta Choudhury S, Pal H. Intriguing Tautomerism of Lumichrome in Binary Aqueous Solvent Mixtures: Implications for Probing Microenvironments. J Phys Chem B 2016; 120:11970-11977. [DOI: 10.1021/acs.jpcb.6b08777] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Haridas Pal
- Radiation & Photochemistry Division, Bhabha Atomic Research Centre, Mumbai 400085, India
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16
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Chang XP, Xie XY, Lin SY, Cui G. QM/MM Study on Mechanistic Photophysics of Alloxazine Chromophore in Aqueous Solution. J Phys Chem A 2016; 120:6129-36. [DOI: 10.1021/acs.jpca.6b02669] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xue-Ping Chang
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Xiao-Ying Xie
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Shi-Yun Lin
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
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17
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Dutta Choudhury S, Vir P, Mohanty J, Bhasikuttan AC, Pal H. Selective prototropism of lumichrome in cationic micelles and reverse micelles: a photophysical perspective. RSC Adv 2016. [DOI: 10.1039/c5ra23562f] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
BHDC micelles and reverse micelles selectively transform the alloxazine form of lumichrome to the anionic isoalloxazine form, around neutral pH.
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Affiliation(s)
| | - Praveen Vir
- Radiation & Photochemistry Division
- Bhabha Atomic Research Centre
- Mumbai 400 085
- India
| | - Jyotirmayee Mohanty
- Radiation & Photochemistry Division
- Bhabha Atomic Research Centre
- Mumbai 400 085
- India
| | | | - Haridas Pal
- Radiation & Photochemistry Division
- Bhabha Atomic Research Centre
- Mumbai 400 085
- India
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del Valle JC, Díaz-Oliva C. Steady-State Spectroscopy of the 2-(N-methylacetimidoyl)-1-naphthol Molecule. Photochem Photobiol 2015; 91:660-71. [DOI: 10.1111/php.12444] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2014] [Accepted: 02/24/2015] [Indexed: 01/25/2023]
Affiliation(s)
- Juan Carlos del Valle
- Department of Applied Physical Chemistry; Universidad Autónoma de Madrid; Madrid Spain
| | - Cristina Díaz-Oliva
- Department of Applied Physical Chemistry; Universidad Autónoma de Madrid; Madrid Spain
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Takahashi O, Kirikoshi R, Manabe N. Acetic acid can catalyze succinimide formation from aspartic acid residues by a concerted bond reorganization mechanism: a computational study. Int J Mol Sci 2015; 16:1613-26. [PMID: 25588215 PMCID: PMC4307323 DOI: 10.3390/ijms16011613] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2014] [Accepted: 01/04/2015] [Indexed: 11/16/2022] Open
Abstract
Succinimide formation from aspartic acid (Asp) residues is a concern in the formulation of protein drugs. Based on density functional theory calculations using Ace-Asp-Nme (Ace = acetyl, Nme = NHMe) as a model compound, we propose the possibility that acetic acid (AA), which is often used in protein drug formulation for mildly acidic buffer solutions, catalyzes the succinimide formation from Asp residues by acting as a proton-transfer mediator. The proposed mechanism comprises two steps: cyclization (intramolecular addition) to form a gem-diol tetrahedral intermediate and dehydration of the intermediate. Both steps are catalyzed by an AA molecule, and the first step was predicted to be rate-determining. The cyclization results from a bond formation between the amide nitrogen on the C-terminal side and the side-chain carboxyl carbon, which is part of an extensive bond reorganization (formation and breaking of single bonds and the interchange of single and double bonds) occurring concertedly in a cyclic structure formed by the amide NH bond, the AA molecule and the side-chain C=O group and involving a double proton transfer. The second step also involves an AA-mediated bond reorganization. Carboxylic acids other than AA are also expected to catalyze the succinimide formation by a similar mechanism.
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Affiliation(s)
- Ohgi Takahashi
- Faculty of Pharmaceutical Sciences, Tohoku Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai 981-8558, Japan.
| | - Ryota Kirikoshi
- Faculty of Pharmaceutical Sciences, Tohoku Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai 981-8558, Japan.
| | - Noriyoshi Manabe
- Faculty of Pharmaceutical Sciences, Tohoku Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai 981-8558, Japan.
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20
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Biologically inspired pteridine redox centres for rechargeable batteries. Nat Commun 2014; 5:5335. [DOI: 10.1038/ncomms6335] [Citation(s) in RCA: 203] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2014] [Accepted: 09/18/2014] [Indexed: 12/23/2022] Open
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21
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Prukala D, Khmelinskii I, Koput J, Gierszewski M, Pędziński T, Sikorski M. Photophysics, excited-state double-proton transfer and hydrogen-bonding properties of 5-deazaalloxazines. Photochem Photobiol 2014; 90:972-88. [PMID: 24816028 DOI: 10.1111/php.12289] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2013] [Accepted: 05/06/2014] [Indexed: 11/30/2022]
Abstract
The photophysical properties of 5-deazaalloxazine and 1,3-dimethyl-5-deazaalloxazine were studied in different solvents. These compounds have higher values of fluorescence quantum yields and longer fluorescence lifetimes, compared to those obtained for their alloxazine analogs. Electronic structure and S0 -Si transitions were investigated using the ab initio methods [MP2, CIS(D), EOM-CCSD] with the correlation-consistent basis sets. Also the time-dependent density functional theory (TD-DFT) has been employed. The lowest singlet excited states of 5-deazaalloxazine and 1,3-dimethyl-5-deazaalloxazine are predicted to have the π, π* character, whereas similar alloxazines have two close-lying π, π* and n, π* transitions. Experimental steady-state and time-resolved spectral studies indicate formation of an isoalloxazinic excited state via excited-state double-proton transfer (ESDPT) catalyzed by an acetic acid molecule that forms a hydrogen bond complex with the 5-deazaalloxazine molecule. Solvatochromism of both 5-deazaalloxazine and its 1,3-dimethyl substituted derivative was analyzed using the Kamlet-Taft scale and four-parameter Catalán solvent scale. The most significant result of our studies is that the both scales show a strong influence of solvent acidity (hydrogen bond donating ability) on the emission properties of these compounds, indicating the importance of intermolecular solute-solvent hydrogen-bonding interactions in their excited state.
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Affiliation(s)
- Dorota Prukala
- Faculty of Chemistry, Adam Mickiewicz University in Poznań, Poznań, Poland
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22
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Prukała D, Gierszewski M, Pędziński T, Sikorski M. Influence of pH on spectral and photophysical properties of 9-methyl-5-deazaalloxazine and 10-ethyl-5-deaza-isoalloxazine. J Photochem Photobiol A Chem 2014. [DOI: 10.1016/j.jphotochem.2013.10.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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23
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Spectroscopy and Photophysics of Monomethyl-Substituted Derivatives of 5-Deazaalloxazine and 10-Ethyl-5-Deaza-Isoalloxazine. J Fluoresc 2013; 24:505-21. [PMID: 24272639 DOI: 10.1007/s10895-013-1320-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2013] [Accepted: 11/07/2013] [Indexed: 11/27/2022]
Abstract
Steady-state and time-resolved spectra were used to describe the singlet and triplet states of 8-methyl-5-deazaalloxazine (8-Me-5-DAll), 9-methyl-5-deazaalloxazine (9-Me-5-DAll) and 10-ethyl-5-deaza-isoalloxazine (10-Et-5-DIAll). Solvatochromic properties were described using different polarity scales, including Δf and the four-parameter scale proposed by Catalán. The results indicate that the Catalán scale shows a strong influence of solvent acidity (hydrogen-bond donating ability) on the emission properties of 8-Me-5-DAll and 9-Me-5-DAll. These results indicate the importance of intermolecular solute-solvent hydrogen-bonding interactions in the excited state of these compounds. Contrary to deazaalloxazines, solvent acidity affects the absorption spectra of 10-Et-5-DIAll. Fluorescence lifetimes and quantum yields and also transient absorption spectra were determined for all of the compounds studied. Electronic structure and S(0)-S(i), S(0)-T(i ), T(1)-T(i) transitions energies and oscillator strengths were calculated using the TD-DFT methods. Theoretical calculations were compared to experimental data.
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24
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Ultrafast dynamics of lumichrome in solution and in chemical and biological caging media. J Photochem Photobiol A Chem 2012. [DOI: 10.1016/j.jphotochem.2012.01.017] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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25
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Biczók L, Wintgens V, Miskolczy Z, Megyesi M. Fluorescence Response of Alkaloids and DAPI on Inclusion in Cucurbit[7]uril: Utilization for the Study of the Encapsulation of Ionic Liquid Cations. Isr J Chem 2011. [DOI: 10.1002/ijch.201100027] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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26
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Marchena M, Gil M, Martín C, Organero JA, Sanchez F, Douhal A. Stability and Photodynamics of Lumichrome Structures in Water at Different pHs and in Chemical and Biological Caging Media. J Phys Chem B 2011; 115:2424-35. [DOI: 10.1021/jp110134f] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Maria Marchena
- Facultad de Ciencias Ambientales y Bioquímica, and INAMOL, Departamento de Quimica Fisica, Universidad de Castilla-La Mancha, Avenida Carlos III, S.N. 45071 Toledo, Spain
- Facultad de Quimica, Departamento de Quimica Fisica, Universidad de Sevilla, Calle Profesor Garcia Gonzalez, S.N. 41012 Sevilla, Spain
| | - Michał Gil
- Facultad de Ciencias Ambientales y Bioquímica, and INAMOL, Departamento de Quimica Fisica, Universidad de Castilla-La Mancha, Avenida Carlos III, S.N. 45071 Toledo, Spain
| | - Cristina Martín
- Facultad de Ciencias Ambientales y Bioquímica, and INAMOL, Departamento de Quimica Fisica, Universidad de Castilla-La Mancha, Avenida Carlos III, S.N. 45071 Toledo, Spain
| | - Juan Angel Organero
- Facultad de Ciencias Ambientales y Bioquímica, and INAMOL, Departamento de Quimica Fisica, Universidad de Castilla-La Mancha, Avenida Carlos III, S.N. 45071 Toledo, Spain
| | - Francisco Sanchez
- Facultad de Quimica, Departamento de Quimica Fisica, Universidad de Sevilla, Calle Profesor Garcia Gonzalez, S.N. 41012 Sevilla, Spain
| | - Abderrazzak Douhal
- Facultad de Ciencias Ambientales y Bioquímica, and INAMOL, Departamento de Quimica Fisica, Universidad de Castilla-La Mancha, Avenida Carlos III, S.N. 45071 Toledo, Spain
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27
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Ye S, Wei F. An approach to compatible multiple nonlinear vibrational spectroscopy measurements using a commercial sum frequency generation system. Analyst 2011; 136:2489-94. [DOI: 10.1039/c1an15032d] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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Tyagi A, Penzkofer A. Absorption and Emission Spectroscopic Characterization of Lumichrome in Aqueous Solutions†. Photochem Photobiol 2010; 87:524-33. [DOI: 10.1111/j.1751-1097.2010.00836.x] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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29
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Bairi P, Roy B, Nandi AK. Bicomponent Hydrogels of Lumichrome and Melamine: Photoluminescence Property and Its Dependency on pH and Temperature. J Phys Chem B 2010; 114:11454-61. [DOI: 10.1021/jp105378e] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Partha Bairi
- Polymer Science Unit, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Bappaditya Roy
- Polymer Science Unit, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Arun K. Nandi
- Polymer Science Unit, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
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30
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Sahoo D, Chakravorti S. Influence of surfactants on the excited state photophysics of 4-nitro-1-hydroxy-2-naphthoic acid. Photochem Photobiol Sci 2010; 9:1094-100. [DOI: 10.1039/c0pp00104j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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31
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Hoffmann M, Grajewski J, Gawronski J. Extending the applications of circular dichroism in structure elucidation: aqueous environment breaks the symmetry of tartrate dianion. NEW J CHEM 2010. [DOI: 10.1039/c0nj00072h] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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32
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Miskolczy Z, Biczók L, Görner H. Tautomerization of lumichrome promoted by supramolecular complex formation with cucurbit[7]uril. J Photochem Photobiol A Chem 2009. [DOI: 10.1016/j.jphotochem.2008.12.012] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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33
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Electronic structure and spectral properties of selected trimethyl-alloxazines: Combined experimental and DFT study. Chem Phys 2009. [DOI: 10.1016/j.chemphys.2009.05.011] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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34
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Salzmann S, Marian CM. The photophysics of alloxazine: a quantum chemical investigation in vacuum and solution. Photochem Photobiol Sci 2009; 8:1655-66. [DOI: 10.1039/b9pp00022d] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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35
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Sikorski M, Prukała D, Insińska-Rak M, Khmelinskii I, Worrall DR, Williams SL, Hernando J, Bourdelande JL, Koput J, Sikorska E. Spectroscopy and photophysics of dimethyl-substituted alloxazines. J Photochem Photobiol A Chem 2008. [DOI: 10.1016/j.jphotochem.2008.07.006] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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36
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Sekiya H, Sakota K. Excited-state double-proton transfer in a model DNA base pair: Resolution for stepwise and concerted mechanism controversy in the 7-azaindole dimer revealed by frequency- and time-resolved spectroscopy. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS 2008. [DOI: 10.1016/j.jphotochemrev.2008.04.001] [Citation(s) in RCA: 92] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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37
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Sikorska E, Khmelinskii I, Kubicki M, Prukała W, Hoffmann M, Machado IF, Ferreira LFV, Karolczak J, Worrall DR, Krawczyk A, Insińska-Rak M, Sikorski M. In Search of Excited-State Proton Transfer in the Lumichrome Dimer in the Solid State: Theoretical and Experimental Approach. J Phys Chem A 2006; 110:4638-48. [PMID: 16599430 DOI: 10.1021/jp060072y] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Quantum chemical density functional theory (DFT) calculations and spectral data were employed to investigate the possibility of the excited-state double proton transfer (ESDPT) in lumichrome crystals. The calculations in a lumichrome dimer predict a transfer of a proton in the first excited state, leading to a cation-anion pair. The presently reported X-ray structure of 1,3-dimethyllumichrome and its complex solid-state luminescence indicate that also in this molecule intermolecular hydrogen bonds might be involved in the photophysics. The long-wavelength emission in lumichrome crystals peaked at 530 nm is attributed to excited-state proton transfer, whereas a wider emission band in methylated lumichrome derivatives peaked at 560 nm is attributed to ions formed upon photoexcitation of the crystals.
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Affiliation(s)
- Ewa Sikorska
- Faculty of Commodity Science, Poznań University of Economics, al. Niepodleglości 10, 60-967 Poznań, Poland
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