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Li Q, Wang Y, Zhang G, Su R, Qi W. Biomimetic mineralization based on self-assembling peptides. Chem Soc Rev 2023; 52:1549-1590. [PMID: 36602188 DOI: 10.1039/d2cs00725h] [Citation(s) in RCA: 18] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Biomimetic science has attracted great interest in the fields of chemistry, biology, materials science, and energy. Biomimetic mineralization is the process of synthesizing inorganic minerals under the control of organic molecules or biomolecules under mild conditions. Peptides are the motifs that constitute proteins, and can self-assemble into various hierarchical structures and show a high affinity for inorganic substances. Therefore, peptides can be used as building blocks for the synthesis of functional biomimetic materials. With the participation of peptides, the morphology, size, and composition of mineralized materials can be controlled precisely. Peptides not only provide well-defined templates for the nucleation and growth of inorganic nanomaterials but also have the potential to confer inorganic nanomaterials with high catalytic efficiency, selectivity, and biotherapeutic functions. In this review, we systematically summarize research progress in the formation mechanism, nanostructural manipulation, and applications of peptide-templated mineralized materials. These can further inspire researchers to design structurally complex and functionalized biomimetic materials with great promising applications.
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Affiliation(s)
- Qing Li
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China.
| | - Yuefei Wang
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China. .,Tianjin Key Laboratory of Membrane Science and Desalination Technology, Tianjin University, Tianjin 300072, P. R. China
| | - Gong Zhang
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China. .,State and Local Joint Engineering Laboratory for Novel Functional Polymeric Materials, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou Industrial Park, Suzhou 215123, P. R. China
| | - Rongxin Su
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China. .,Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300072, P. R. China.,Tianjin Key Laboratory of Membrane Science and Desalination Technology, Tianjin University, Tianjin 300072, P. R. China
| | - Wei Qi
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, P. R. China. .,Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300072, P. R. China.,Tianjin Key Laboratory of Membrane Science and Desalination Technology, Tianjin University, Tianjin 300072, P. R. China
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2
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Sharma RK, Kaushik B, Yadav S, Rana P, Rana P, Solanki K, Rawat D. Ingeniously designed Silica nanostructures as an exceptional support: Opportunities, potential challenges and future prospects for viable degradation of pesticides. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 301:113821. [PMID: 34731966 DOI: 10.1016/j.jenvman.2021.113821] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 09/16/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Despite significant advancements in modern agricultural practices, efficient handling of pesticides is a must as they are continuously defiling our terrestrial as well as aquatic life. During the last couple of decades, substantial efforts by various research groups have been devoted to find innovative solutions to remove pesticides from our environment in a greener way. In this regard, functionalized silica nanoparticles (NPs) have gained considerable attention of scientific community due to their notable properties such as amenable design, large surface area as well as fine-tunable and uniform pore structures which make them an ideal material for pesticides removal. The present review aims to proffer current scientific progress attained by silica-based nanostructures as an excellent material for effective removal of noxious agrochemicals. Further, a brief discussion on the synthetic strategies as well as intrinsic benefits associated with different morphologies of silica have also been highlighted in this article. It also summarizes the recent reports on silica assisted degradation of pesticides via enzymatic, chemical as well as advanced oxidation protocols. Additionally, it presents a critical analysis of different support materials for decontamination of our ecosystem. The review concludes with potential challenges, their possible solutions along with key knowledge gaps and future research directions for successful deployment of silica supported materials in degradation of pesticides at commercial scale.
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Affiliation(s)
- Rakesh Kumar Sharma
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India.
| | - Bhawna Kaushik
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India
| | - Sneha Yadav
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India
| | - Pooja Rana
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India
| | - Pooja Rana
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India
| | - Kanika Solanki
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi, 110007, India
| | - Deepti Rawat
- Department of Chemistry, Miranda House College, University of Delhi, New Delhi, 110007, India
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3
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Natural and Synthetic Biomaterials for Engineering Multicellular Tumor Spheroids. Polymers (Basel) 2020; 12:polym12112506. [PMID: 33126468 PMCID: PMC7692845 DOI: 10.3390/polym12112506] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Revised: 10/23/2020] [Accepted: 10/26/2020] [Indexed: 02/06/2023] Open
Abstract
The lack of in vitro models that represent the native tumor microenvironment is a significant challenge for cancer research. Two-dimensional (2D) monolayer culture has long been the standard for in vitro cell-based studies. However, differences between 2D culture and the in vivo environment have led to poor translation of cancer research from in vitro to in vivo models, slowing the progress of the field. Recent advances in three-dimensional (3D) culture have improved the ability of in vitro culture to replicate in vivo conditions. Although 3D cultures still cannot achieve the complexity of the in vivo environment, they can still better replicate the cell-cell and cell-matrix interactions of solid tumors. Multicellular tumor spheroids (MCTS) are three-dimensional (3D) clusters of cells with tumor-like features such as oxygen gradients and drug resistance, and represent an important translational tool for cancer research. Accordingly, natural and synthetic polymers, including collagen, hyaluronic acid, Matrigel®, polyethylene glycol (PEG), alginate and chitosan, have been used to form and study MCTS for improved clinical translatability. This review evaluates the current state of biomaterial-based MCTS formation, including advantages and disadvantages of the different biomaterials and their recent applications to the field of cancer research, with a focus on the past five years.
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4
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Surfactant-like peptides: From molecular design to controllable self-assembly with applications. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2020.213418] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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5
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Jamshidi R, Chen Y, Montazami R. Active Transiency: A Novel Approach to Expedite Degradation in Transient Electronics. MATERIALS 2020; 13:ma13071514. [PMID: 32224921 PMCID: PMC7177843 DOI: 10.3390/ma13071514] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 03/17/2020] [Accepted: 03/24/2020] [Indexed: 11/28/2022]
Abstract
Transient materials/electronics is an emerging class of technology concerned with materials and devices that are designed to operate over a pre-defined period of time, then undergo controlled degradation when exposed to stimuli. Degradation/transiency rate in solvent-triggered devices is strongly dependent on the chemical composition of the constituents, as well as their interactions with the solvent upon exposure. Such interactions are typically slow, passive, and diffusion-driven. In this study, we are introducing and exploring the integration of gas-forming reactions into transient materials/electronics to achieve expedited and active transiency. The integration of more complex chemical reaction paths to transiency not only expedites the dissolution mechanism but also maintains the pre-transiency stability of the system while under operation. A proof-of-concept transient electronic device, utilizing sodium-bicarbonate/citric-acid pair as gas-forming agents, is demonstrated and studied vs. control devices in the absence of gas-forming agents. While exhibiting enhanced transiency behavior, substrates with gas-forming agents also demonstrated sufficient mechanical properties and physical stability to be used as platforms for electronics.
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Affiliation(s)
- Reihaneh Jamshidi
- Department of Mechanical Engineering, University of Hartford, West Hartford, CT 06117, USA
- Correspondence:
| | - Yuanfen Chen
- College of Mechanical Engineering, Guangxi University, Nanning 530004, China;
| | - Reza Montazami
- Department of Mechanical Engineering, Iowa State University, Ames, IA 50011, USA;
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6
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Kojima S, Nakamura H, Lee S, Nagata F, Kato K. Hydroxyapatite Formation on Self-Assembling Peptides with Differing Secondary Structures and Their Selective Adsorption for Proteins. Int J Mol Sci 2019; 20:E4650. [PMID: 31546830 PMCID: PMC6770391 DOI: 10.3390/ijms20184650] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 09/12/2019] [Accepted: 09/17/2019] [Indexed: 11/16/2022] Open
Abstract
Self-assembling peptides have been employed as biotemplates for biomineralization, as the morphologies and sizes of the inorganic materials can be easily controlled. We synthesized two types of highly ordered self-assembling peptides with different secondary structures and investigated the effects of secondary structures on hydroxyapatite (HAp) biomineralization of peptide templates. All as-synthesized HAp-peptides have a selective protein adsorption capacity for basic protein (e.g., cytochrome c and lysozyme). Moreover, the selectivity was improved as peptide amounts increased. In particular, peptide-HAp templated on β-sheet peptides adsorbed more cytochrome c than peptide-HAp with α-helix structures, due to the greater than 2-times carboxyl group density at their surfaces. It can be expected that self-assembled peptide-templated HAp may be used as carriers for protein immobilization in biosensing and bioseparation applications and as enzyme-stabilizing agents.
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Affiliation(s)
- Suzuka Kojima
- National Institute of Advanced Industrial Science and Technology, 2266-98, Anagahora, Shimo-Shidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan.
| | - Hitomi Nakamura
- National Institute of Advanced Industrial Science and Technology, 2266-98, Anagahora, Shimo-Shidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan.
| | - Sungho Lee
- National Institute of Advanced Industrial Science and Technology, 2266-98, Anagahora, Shimo-Shidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan.
| | - Fukue Nagata
- National Institute of Advanced Industrial Science and Technology, 2266-98, Anagahora, Shimo-Shidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan.
| | - Katsuya Kato
- National Institute of Advanced Industrial Science and Technology, 2266-98, Anagahora, Shimo-Shidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan.
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7
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Xu S, Wang Y, Qi W, Su R, He Z. Design of Silica Nanostructures with Tunable Architectures Templated by Ferrocene Peptides. ChemistrySelect 2018. [DOI: 10.1002/slct.201800805] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Sheng Xu
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology; Tianjin University; Tianjin 300072, P. R. China
| | - Yuefei Wang
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology; Tianjin University; Tianjin 300072, P. R. China
- Tianjin Key Laboratory of Membrane Science and Desalination Technology; Tianjin University; Tianjin 300072, P. R. China
| | - Wei Qi
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology; Tianjin University; Tianjin 300072, P. R. China
- Collaborative Innovation Centre of Chemical Science and Engineering (Tianjin); Tianjin 300072, P. R. China
- Tianjin Key Laboratory of Membrane Science and Desalination Technology; Tianjin University; Tianjin 300072, P. R. China
| | - Rongxin Su
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology; Tianjin University; Tianjin 300072, P. R. China
- Collaborative Innovation Centre of Chemical Science and Engineering (Tianjin); Tianjin 300072, P. R. China
- Tianjin Key Laboratory of Membrane Science and Desalination Technology; Tianjin University; Tianjin 300072, P. R. China
| | - Zhimin He
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology; Tianjin University; Tianjin 300072, P. R. China
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8
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Acar H, Ting JM, Srivastava S, LaBelle JL, Tirrell MV. Molecular engineering solutions for therapeutic peptide delivery. Chem Soc Rev 2018; 46:6553-6569. [PMID: 28902203 DOI: 10.1039/c7cs00536a] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Proteins and their interactions in and out of cells must be well-orchestrated for the healthy functioning and regulation of the body. Even the slightest disharmony can cause diseases. Therapeutic peptides are short amino acid sequences (generally considered <50 amino acids) that can naturally mimic the binding interfaces between proteins and thus, influence protein-protein interactions. Because of their fidelity of binding, peptides are a promising next generation of personalized medicines to reinstate biological harmony. Peptides as a group are highly selective, relatively safe, and biocompatible. However, they are also vulnerable to many in vivo pharmacologic barriers limiting their clinical translation. Current advances in molecular, chemical, and nanoparticle engineering are helping to overcome these previously insurmountable obstacles and improve the future of peptides as active and highly selective therapeutics. In this review, we focus on self-assembled vehicles as nanoparticles to carry and protect therapeutic peptides through this journey, and deliver them to the desired tissue.
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Affiliation(s)
- Handan Acar
- Institute for Molecular Engineering, The University of Chicago, Chicago, IL 60637, USA.
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9
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Glasgow AA, Tullman-Ercek D. Type III Secretion Filaments as Templates for Metallic Nanostructure Synthesis. Methods Mol Biol 2018; 1798:155-171. [PMID: 29868958 DOI: 10.1007/978-1-4939-7893-9_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Nanostructured materials can be interfaced with living cells to enable unique chemical and biological outcomes. However, it is challenging to precisely control the shape and chemical composition of submillimeter sized, cell-associated materials. In this protocol, we describe how to genetically modify and isolate a self-assembling filament protein from Salmonella enterica, PrgI, to bind Au nanoparticles. Au-conjugated filaments can be chemically reduced in vitro to form contiguous wires and networks that are several micrometers in length. We also describe a strategy to assemble PrgI-based filaments on live cells, which can then be sheared or remain tethered to cells for gold conjugation. These methods form the basis of a strategy for interactions between inorganic and organic systems, and could be expanded to introduce interactions with other metal nanoparticles for which peptide binding partners are known.
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Affiliation(s)
- Anum Azam Glasgow
- Department of Bioengineering and Therapeutic Sciences, UC San Francisco, San Francisco, CA, USA
| | - Danielle Tullman-Ercek
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL, USA.
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10
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Albert K, Huang XC, Hsu HY. Bio-templated silica composites for next-generation biomedical applications. Adv Colloid Interface Sci 2017; 249:272-289. [PMID: 28499603 DOI: 10.1016/j.cis.2017.04.011] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Revised: 04/13/2017] [Accepted: 04/21/2017] [Indexed: 11/28/2022]
Abstract
Silica-based materials have extensive biomedical applications owing to their unique physical, chemical, and biological properties. Recently, increasing studies have examined the mechanisms involved in biosilicification to develop novel, fine-tunable, eco-friendly materials and/or technologies. In this review, we focus on recent developments in bio-templated silica synthesis and relevant applications in drug delivery systems, tissue engineering, and biosensing.
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Affiliation(s)
- Karunya Albert
- Institute of Molecular Science, National Chiao-Tung University, No. 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan
| | - Xin-Chun Huang
- Department of Applied Chemistry, National Chiao-Tung University, No. 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan
| | - Hsin-Yun Hsu
- Institute of Molecular Science, National Chiao-Tung University, No. 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan; Department of Applied Chemistry, National Chiao-Tung University, No. 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan.
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11
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Truong QD, Dien LX, Vo DVN, Le TS. Controlled synthesis of titania using water-soluble titanium complexes: A review. J SOLID STATE CHEM 2017. [DOI: 10.1016/j.jssc.2017.04.017] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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12
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Acar H, Srivastava S, Chung EJ, Schnorenberg MR, Barrett JC, LaBelle JL, Tirrell M. Self-assembling peptide-based building blocks in medical applications. Adv Drug Deliv Rev 2017; 110-111:65-79. [PMID: 27535485 PMCID: PMC5922461 DOI: 10.1016/j.addr.2016.08.006] [Citation(s) in RCA: 148] [Impact Index Per Article: 21.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2016] [Revised: 07/01/2016] [Accepted: 08/05/2016] [Indexed: 12/22/2022]
Abstract
Peptides and peptide-conjugates, comprising natural and synthetic building blocks, are an increasingly popular class of biomaterials. Self-assembled nanostructures based on peptides and peptide-conjugates offer advantages such as precise selectivity and multifunctionality that can address challenges and limitations in the clinic. In this review article, we discuss recent developments in the design and self-assembly of various nanomaterials based on peptides and peptide-conjugates for medical applications, and categorize them into two themes based on the driving forces of molecular self-assembly. First, we present the self-assembled nanostructures driven by the supramolecular interactions between the peptides, with or without the presence of conjugates. The studies where nanoassembly is driven by the interactions between the conjugates of peptide-conjugates are then presented. Particular emphasis is given to in vivo studies focusing on therapeutics, diagnostics, immune modulation and regenerative medicine. Finally, challenges and future perspectives are presented.
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Affiliation(s)
- Handan Acar
- Institute for Molecular Engineering, University of Chicago, Chicago, IL 60637, USA; Department of Pediatrics, Section of Hematology/Oncology, University of Chicago, Chicago, IL 60637, USA.
| | - Samanvaya Srivastava
- Institute for Molecular Engineering, University of Chicago, Chicago, IL 60637, USA; Institute for Molecular Engineering, Argonne National Laboratory, Argonne, IL 60439, USA.
| | - Eun Ji Chung
- Institute for Molecular Engineering, University of Chicago, Chicago, IL 60637, USA; Department of Biomedical Engineering, University of Southern California, Los Angeles, CA 90089, USA
| | - Mathew R Schnorenberg
- Institute for Molecular Engineering, University of Chicago, Chicago, IL 60637, USA; Department of Pediatrics, Section of Hematology/Oncology, University of Chicago, Chicago, IL 60637, USA; Medical Scientist Training Program, University of Chicago, Chicago, IL 60637, USA.
| | - John C Barrett
- Biophysical Sciences Graduate Program, University of Chicago, Chicago, IL 60637, USA.
| | - James L LaBelle
- Department of Pediatrics, Section of Hematology/Oncology, University of Chicago, Chicago, IL 60637, USA.
| | - Matthew Tirrell
- Institute for Molecular Engineering, University of Chicago, Chicago, IL 60637, USA; Institute for Molecular Engineering, Argonne National Laboratory, Argonne, IL 60439, USA.
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Al-Garawi ZS, Kostakis GE, Serpell LC. Chemically and thermally stable silica nanowires with a β-sheet peptide core for bionanotechnology. J Nanobiotechnology 2016; 14:79. [PMID: 27905946 PMCID: PMC5134108 DOI: 10.1186/s12951-016-0231-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Accepted: 11/22/2016] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND A series of amyloidogenic peptides based on the sequence KFFEAAAKKFFE template the silica precursor, tetraethyl orthosilicate to form silica-nanowires containing a cross-β peptide core. RESULTS Investigation of the stability of these fibres reveals that the silica layers protect the silica-nanowires allowing them to maintain their shape and physical and chemical properties after incubation with organic solvents such as 2-propanol, ethanol, and acetonitrile, as well as in a strong acidic solution at pH 1.5. Furthermore, these nanowires were thermally stable in an aqueous solution when heated up to 70 °C, and upon autoclaving. They also preserved their conformation following incubation up to 4 weeks under these harsh conditions, and showed exceptionally high physical stability up to 1000 °C after ageing for 12 months. We show that they maintain their β-sheet peptide core even after harsh treatment by confirming the β-sheet content using Fourier transform infrared spectra. The silica nanowires show significantly higher chemical and thermal stability compared to the unsiliconised fibrils. CONCLUSIONS The notable chemical and thermal stability of these silica nanowires points to their potential for use in microelectromechanics processes or fabrication for nanotechnological devices.
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Affiliation(s)
- Zahraa S Al-Garawi
- School of Life Sciences, University of Sussex, East Sussex, Falmer, BN1 9QG, UK.,Chemistry Department, College of Sciences, Al-Mustansyria University, Baghdad, Iraq
| | - George E Kostakis
- School of Life Sciences, University of Sussex, East Sussex, Falmer, BN1 9QG, UK
| | - Louise C Serpell
- School of Life Sciences, University of Sussex, East Sussex, Falmer, BN1 9QG, UK.
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14
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Usui K, Ozaki M, Yamada A, Hamada Y, Tsuruoka T, Imai T, Tomizaki KY. Site-specific control of multiple mineralizations using a designed peptide and DNA. NANOSCALE 2016; 8:17081-17084. [PMID: 27550384 DOI: 10.1039/c6nr03468c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We have developed a site-specific method for precipitating multiple inorganic compounds using target DNA and a designed peptide consisting of a peptide nucleic acid (PNA) sequence and an inorganic compound-precipitating sequence. This system for controlled site-specific precipitation represents a powerful tool for use in nanobiotechnology and materials science.
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Affiliation(s)
- Kenji Usui
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
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15
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Azam A, Tullman-Ercek D. Type-III secretion filaments as scaffolds for inorganic nanostructures. J R Soc Interface 2016; 13:20150938. [PMID: 26763334 DOI: 10.1098/rsif.2015.0938] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Nanostructured materials exhibit unique magnetic, electrical and catalytic properties. These characteristics are determined by the chemical composition, size and shape of the nanostructured components, which are challenging to modulate on such small size scales and to interface with living cells. To address this problem, we are using a self-assembling filament protein, PrgI, as a scaffold for bottom-up inorganic nanostructure synthesis. PrgI is a small protein (80 amino acids) that oligomerizes to form the type-III secretion system needle of Salmonella enterica. We demonstrate that purified PrgI monomers also spontaneously self-assemble into long filaments and that high-affinity peptide tags specific for attachment to functionalized particles can be integrated into the N-terminal region of PrgI. The resulting filaments selectively bind to gold, whether the filaments are assembled in vitro, sheared from cells or remain attached to live S. enterica cell membranes. Chemical reduction of the gold-modified PrgI variants results in structures that are several micrometres in length and which incorporate a contiguous gold surface. Mutant strains with genomically incorporated metal-binding tags retain the secretion phenotype. We anticipate that self-assembled, cell-tethered protein/metal filamentous structures have applications in sensing and energy transduction in vivo.
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Affiliation(s)
- Anum Azam
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA
| | - Danielle Tullman-Ercek
- Department of Chemical and Biomolecular Engineering, University of California Berkeley, Berkeley, CA, USA
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16
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Ekiz MS, Cinar G, Khalily MA, Guler MO. Self-assembled peptide nanostructures for functional materials. NANOTECHNOLOGY 2016; 27:402002. [PMID: 27578525 DOI: 10.1088/0957-4484/27/40/402002] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Nature is an important inspirational source for scientists, and presents complex and elegant examples of adaptive and intelligent systems created by self-assembly. Significant effort has been devoted to understanding these sophisticated systems. The self-assembly process enables us to create supramolecular nanostructures with high order and complexity, and peptide-based self-assembling building blocks can serve as suitable platforms to construct nanostructures showing diverse features and applications. In this review, peptide-based supramolecular assemblies will be discussed in terms of their synthesis, design, characterization and application. Peptide nanostructures are categorized based on their chemical and physical properties and will be examined by rationalizing the influence of peptide design on the resulting morphology and the methods employed to characterize these high order complex systems. Moreover, the application of self-assembled peptide nanomaterials as functional materials in information technologies and environmental sciences will be reviewed by providing examples from recently published high-impact studies.
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Affiliation(s)
- Melis Sardan Ekiz
- Institute of Materials Science and Nanotechnology, National Nanotechnology Research Center (UNAM), Bilkent University, Ankara, 06800 Turkey
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17
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Ozaki M, Nagai K, Nishiyama H, Tsuruoka T, Fujii S, Endoh T, Imai T, Tomizaki KY, Usui K. Site-specific control of silica mineralization on DNA using a designed peptide. Chem Commun (Camb) 2016; 52:4010-3. [PMID: 26690695 DOI: 10.1039/c5cc07870a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We developed a site-specific method for precipitating inorganic compounds using organic compounds, DNA, and designed peptides with peptide nucleic acids (PNAs). Such a system for site-specific precipitation represents a powerful tool for use in nanobiochemistry and materials chemistry.
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Affiliation(s)
- Makoto Ozaki
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
| | - Kazuma Nagai
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
| | - Hiroto Nishiyama
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
| | - Takaaki Tsuruoka
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
| | - Satoshi Fujii
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
| | - Tamaki Endoh
- FIBER (Frontier Institute for Biomolecular Engineering Research), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
| | - Takahito Imai
- Department of Materials Chemistry, Ryukoku University, 1-5 Yokotani, Seta Oe-cho, Otsu 520-2194, Japan
| | - Kin-Ya Tomizaki
- Department of Materials Chemistry, Ryukoku University, 1-5 Yokotani, Seta Oe-cho, Otsu 520-2194, Japan and Innovative Materials and Processing Research Center, Ryukoku University, 1-5 Yokotani, Seta Oe-cho, Otsu 520-2194, Japan.
| | - Kenji Usui
- FIRST (Faculty of Frontiers of Innovative Research in Science and Technology), Konan University, 7-1-20 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan.
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18
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Liu Y, Yang P, Li J, Matras-Postolek K, Yue Y, Huang B. Formation of SiO2@SnO2 core–shell nanofibers and their gas sensing properties. RSC Adv 2016. [DOI: 10.1039/c5ra25878b] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
SiO2@SnO2 core–shell nanofibers were prepared by a single-spinneret electrospinning route and subsequent calcination process. Both the ratio of Sn and Si and the special core–shell structure played significant roles in gas sensing performance.
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Affiliation(s)
- Yunshi Liu
- School of Material Science and Engineering
- University of Jinan
- Jinan
- P. R. China
| | - Ping Yang
- School of Material Science and Engineering
- University of Jinan
- Jinan
- P. R. China
| | - Jia Li
- School of Material Science and Engineering
- University of Jinan
- Jinan
- P. R. China
| | | | - Yunlong Yue
- School of Material Science and Engineering
- University of Jinan
- Jinan
- P. R. China
| | - Baibiao Huang
- State Key Laboratory of Crystal Materials
- Shandong University
- Jinan
- P. R. China
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19
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Wang S, Cai Q, Du M, Xue J, Xu H. Synthesis of 1D Silica Nanostructures with Controllable Sizes Based on Short Anionic Peptide Self-Assembly. J Phys Chem B 2015; 119:12059-65. [PMID: 26301578 DOI: 10.1021/acs.jpcb.5b06455] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Artificial synthesis of silica under benign conditions is usually achieved by using cationic organic matrices as templates while the anionic analogues have not received enough consideration, albeit they are also functioning in biosilica formation. In this work, we report the design and self-assembly of an anionic peptide amphiphile (I3E) and the use of its self-assemblies as templates to synthesize 1D silica nanostructures with tunable sizes. We show that short I3E readily formed long nanofibrils in aqueous solution via a hierarchical self-assembly process. By using APTES and TEOS as silica precursors, we found that the I3E nanofibrils templated the production of silica nanotubes with a wide size distribution, in which the silica size regulation was achieved by tuning the interactions among the peptide template and silicon species. These results clearly illustrate a facile method for generating silica nanomaterials based on anionic matrices.
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Affiliation(s)
- Shengjie Wang
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering and Biotechnology, China University of Petroleum (East China) , No. 66 Changjiang West Road, Qingdao 266580, P. R. China
| | - Qingwei Cai
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering and Biotechnology, China University of Petroleum (East China) , No. 66 Changjiang West Road, Qingdao 266580, P. R. China
| | - Mingxuan Du
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering and Biotechnology, China University of Petroleum (East China) , No. 66 Changjiang West Road, Qingdao 266580, P. R. China
| | - Junyi Xue
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering and Biotechnology, China University of Petroleum (East China) , No. 66 Changjiang West Road, Qingdao 266580, P. R. China
| | - Hai Xu
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering and Biotechnology, China University of Petroleum (East China) , No. 66 Changjiang West Road, Qingdao 266580, P. R. China
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20
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Kim S, Kim JH, Lee JS, Park CB. Beta-Sheet-Forming, Self-Assembled Peptide Nanomaterials towards Optical, Energy, and Healthcare Applications. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2015; 11:3623-40. [PMID: 25929870 DOI: 10.1002/smll.201500169] [Citation(s) in RCA: 134] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2015] [Revised: 02/28/2015] [Indexed: 05/19/2023]
Abstract
Peptide self-assembly is an attractive route for the synthesis of intricate organic nanostructures that possess remarkable structural variety and biocompatibility. Recent studies on peptide-based, self-assembled materials have expanded beyond the construction of high-order architectures; they are now reporting new functional materials that have application in the emerging fields such as artificial photosynthesis and rechargeable batteries. Nevertheless, there have been few reviews particularly concentrating on such versatile, emerging applications. Herein, recent advances in the synthesis of self-assembled peptide nanomaterials (e.g., cross β-sheet-based amyloid nanostructures, peptide amphiphiles) are selectively reviewed and their new applications in diverse, interdisciplinary fields are described, ranging from optics and energy storage/conversion to healthcare. The applications of peptide-based self-assembled materials in unconventional fields are also highlighted, such as photoluminescent peptide nanostructures, artificial photosynthetic peptide nanomaterials, and lithium-ion battery components. The relation of such functional materials to the rapidly progressing biomedical applications of peptide self-assembly, which include biosensors/chips and regenerative medicine, are discussed. The combination of strategies shown in these applications would further promote the discovery of novel, functional, small materials.
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Affiliation(s)
- Sungjin Kim
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Jae Hong Kim
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Joon Seok Lee
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Chan Beum Park
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), 335 Science Road, Daejeon, 305-701, Republic of Korea
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21
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Altintoprak K, Seidenstücker A, Welle A, Eiben S, Atanasova P, Stitz N, Plettl A, Bill J, Gliemann H, Jeske H, Rothenstein D, Geiger F, Wege C. Peptide-equipped tobacco mosaic virus templates for selective and controllable biomineral deposition. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2015; 6:1399-412. [PMID: 26199844 PMCID: PMC4505087 DOI: 10.3762/bjnano.6.145] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2015] [Accepted: 05/29/2015] [Indexed: 05/22/2023]
Abstract
The coating of regular-shaped, readily available nanorod biotemplates with inorganic compounds has attracted increasing interest during recent years. The goal is an effective, bioinspired fabrication of fiber-reinforced composites and robust, miniaturized technical devices. Major challenges in the synthesis of applicable mineralized nanorods lie in selectivity and adjustability of the inorganic material deposited on the biological, rod-shaped backbones, with respect to thickness and surface profile of the resulting coating, as well as the avoidance of aggregation into extended superstructures. Nanotubular tobacco mosaic virus (TMV) templates have proved particularly suitable towards this goal: Their multivalent protein coating can be modified by high-surface-density conjugation of peptides, inducing and governing silica deposition from precursor solutions in vitro. In this study, TMV has been equipped with mineralization-directing peptides designed to yield silica coatings in a reliable and predictable manner via precipitation from tetraethoxysilane (TEOS) precursors. Three peptide groups were compared regarding their influence on silica polymerization: (i) two peptide variants with alternating basic and acidic residues, i.e. lysine-aspartic acid (KD) x motifs expected to act as charge-relay systems promoting TEOS hydrolysis and silica polymerization; (ii) a tetrahistidine-exposing polypeptide (CA4H4) known to induce silicification due to the positive charge of its clustered imidazole side chains; and (iii) two peptides with high ZnO binding affinity. Differential effects on the mineralization of the TMV surface were demonstrated, where a (KD) x charge-relay peptide (designed in this study) led to the most reproducible and selective silica deposition. A homogenous coating of the biotemplate and tight control of shell thickness were achieved.
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Affiliation(s)
- Klara Altintoprak
- Department of Molecular Biology and Plant Virology, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Axel Seidenstücker
- Institute of Solid State Physics, University of Ulm, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Alexander Welle
- Karlsruhe Nano Micro Facility (KNMF), Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute of Functional Interfaces (IFG), Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Sabine Eiben
- Department of Molecular Biology and Plant Virology, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Petia Atanasova
- Institute for Materials Science, University of Stuttgart, Heisenbergstraße 3, 70569 Stuttgart, Germany
| | - Nina Stitz
- Institute for Materials Science, University of Stuttgart, Heisenbergstraße 3, 70569 Stuttgart, Germany
| | - Alfred Plettl
- Institute of Solid State Physics, University of Ulm, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Joachim Bill
- Institute for Materials Science, University of Stuttgart, Heisenbergstraße 3, 70569 Stuttgart, Germany
| | - Hartmut Gliemann
- Institute of Functional Interfaces (IFG), Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Holger Jeske
- Department of Molecular Biology and Plant Virology, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Dirk Rothenstein
- Institute for Materials Science, University of Stuttgart, Heisenbergstraße 3, 70569 Stuttgart, Germany
| | - Fania Geiger
- Department of Molecular Biology and Plant Virology, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Christina Wege
- Department of Molecular Biology and Plant Virology, Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
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22
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Dugger JW, Webb LJ. Fibrillar structures formed by covalently bound, short, β-stranded peptides on self-assembled monolayers. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:3441-3450. [PMID: 25738859 DOI: 10.1021/la5049369] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The ability to maintain or reproduce biomolecular structures on inorganic substrates has the potential to impact diverse fields such as sensing and molecular electronics, as well as the study of biological self-assembly and structure-function relationships. Because the structure and self-assembly of biomolecules are exquisitely sensitive to their local chemical and electrostatic environment, the goal of reproducing or mimicking biological function in an abiological environment, including at a surface, is challenging. However, simple and well-characterized chemical modifications of prepared surfaces can be used to tune surface chemistry, structure, electrostatics, and reactivity of inorganic materials to facilitate biofunctionalization and function. Here, we describe the covalent attachment of 13-residue β-stranded peptides containing alkyne groups to a flat gold surface functionalized with an azide-terminated self-assembled monolayer through a Huisgen cycloaddition, or "click", reaction. The chemical composition and structural morphology of these surfaces were characterized using X-ray photoelectron spectroscopy, grazing incidence angle reflection-absorption infrared spectroscopy, surface circular dichroism, and atomic force microscopy. The surface-bound β-strands self-assemble into antiparallel β-sheets to form fibrillar structures 24.9 ± 1.6 nm in diameter and 2.83 ± 0.74 nm in height on the reactive surface. The results herein provide a platform for studying and controlling the self-assembly process of biomolecules into larger supermolecular structures while allowing tunable control through chemical functionalization of the surface. Interest in the mechanisms of formation of fibrillar structures has most commonly been associated with neurodegenerative diseases, such as Alzheimer's and Parkinson's, but fibrils may actually represent the thermodynamic low-energy conformation of a much larger class of peptides and proteins. The protocol developed here is an important step toward uncovering not only the factors that dictate self-assembly but also the mechanisms by which this fibrillar class of superstructures forms.
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Affiliation(s)
- Jason W Dugger
- Department of Chemistry, Center for Nano- and Molecular Science and Technology, and Institute for Cell and Molecular Biology, The University of Texas at Austin, 1 University Station, A5300, Austin, Texas 78712, United States
| | - Lauren J Webb
- Department of Chemistry, Center for Nano- and Molecular Science and Technology, and Institute for Cell and Molecular Biology, The University of Texas at Austin, 1 University Station, A5300, Austin, Texas 78712, United States
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23
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Huang Z, Yao Y, Han L, Che S. Control of Chiral Nanostructures by Self-Assembly of Designed Amphiphilic Peptides and Silica Biomineralization. Chemistry 2014; 20:17068-76. [DOI: 10.1002/chem.201403498] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2014] [Indexed: 11/08/2022]
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24
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Wang S, Xue J, Zhao Y, Du M, Deng L, Xu H, Lu JR. Controlled silica deposition on self-assembled peptide nanostructures via varying molecular structures of short amphiphilic peptides. SOFT MATTER 2014; 10:7623-7629. [PMID: 25131511 DOI: 10.1039/c4sm01578a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Cationic amphiphilic peptides are highly similar to native silaffins and silicateins for biosilicification in terms of their composition, amphiphilicity, and self-assembling propensity. To understand the relationship between organic molecular structures, molecular self-assembly and silica morphogenesis during biosilicification, we have prepared a series of short self-assembling peptide amphiphiles (I3-5K, I4K2, I3-4R, and I4R2) and investigated their capability to mediate silicification under ambient conditions. I3K self-assembled into tubular nanofibrils while I4K1-2 and I5K formed solid nanofibrils in aqueous solution with their outer diameters decreasing as the number of hydrophobic or hydrophilic amino acid residues increased. Changes in molecular structure thus altered their self-assembled geometries, and the exposed surfaces and surface lysine densities under different geometries then played different mediating roles in silicification, leading to different silica deposition patterns and final silica nanostructures. The templating capacity was weakened or lost when lysine was replaced by arginine, despite the fact that I3-4R and I4R2 self-assembled into nanofibrils and nanoribbons under similar conditions.
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Affiliation(s)
- Shengjie Wang
- State Key Laboratory of Heavy Oil Processing and the Center for Bioengineering and Biotechnology, China University of Petroleum (East China), Qingdao 266580, P. R. China.
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25
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Dehsorkhi A, Castelletto V, Hamley IW. Self-assembling amphiphilic peptides. J Pept Sci 2014; 20:453-67. [PMID: 24729276 PMCID: PMC4237179 DOI: 10.1002/psc.2633] [Citation(s) in RCA: 272] [Impact Index Per Article: 27.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2014] [Revised: 02/27/2014] [Accepted: 03/04/2014] [Indexed: 01/08/2023]
Abstract
The self-assembly of several classes of amphiphilic peptides is reviewed, and selected applications are discussed. We discuss recent work on the self-assembly of lipopeptides, surfactant-like peptides and amyloid peptides derived from the amyloid-β peptide. The influence of environmental variables such as pH and temperature on aggregate nanostructure is discussed. Enzyme-induced remodelling due to peptide cleavage and nanostructure control through photocleavage or photo-cross-linking are also considered. Lastly, selected applications of amphiphilic peptides in biomedicine and materials science are outlined.
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Affiliation(s)
- Ashkan Dehsorkhi
- Department of Chemistry, University of ReadingWhiteknights, Reading, RG6 6AD, UK
| | - Valeria Castelletto
- Department of Chemistry, University of ReadingWhiteknights, Reading, RG6 6AD, UK
| | - Ian W Hamley
- Department of Chemistry, University of ReadingWhiteknights, Reading, RG6 6AD, UK
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26
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27
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Abstract
The self-assembly of different classes of peptide, including cyclic peptides, amyloid peptides and surfactant-like peptides into nanotube structures is reviewed. The modes of self-assembly are discussed. Additionally, applications in bionanotechnology and synthetic materials science are summarized.
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Affiliation(s)
- Ian W Hamley
- Department of Chemistry, University of Reading, Whiteknights, Reading, RG6 6AD (UK).
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28
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Dehsorkhi A, Hamley IW. Silica templating of a self-assembling peptide amphiphile that forms nanotapes. SOFT MATTER 2014; 10:1660-4. [PMID: 24651874 DOI: 10.1039/c3sm52324a] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
The peptide amphiphile C16-KTTKS templates silica polymerization, enabling the production of silica nanotape structures, imaged via electron microscopy (TEM and SEM). X-ray scattering shows that the nanotapes comprise stacked layers, as for the parent peptide amphiphile, but with a substantially increased layer spacing resulting from silica polymerization.
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Affiliation(s)
- Ashkan Dehsorkhi
- School of Chemistry, Pharmacy and Food Biosciences, University of Reading, Whiteknights, Reading, RG6 6AD, UK
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29
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Ceylan H, Ozgit-Akgun C, Erkal TS, Donmez I, Garifullin R, Tekinay AB, Usta H, Biyikli N, Guler MO. Size-controlled conformal nanofabrication of biotemplated three-dimensional TiO₂ and ZnO nanonetworks. Sci Rep 2014; 3:2306. [PMID: 23892593 PMCID: PMC3725508 DOI: 10.1038/srep02306] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Accepted: 07/12/2013] [Indexed: 11/18/2022] Open
Abstract
A solvent-free fabrication of TiO2 and ZnO nanonetworks is demonstrated by using supramolecular nanotemplates with high coating conformity, uniformity, and atomic scale size control. Deposition of TiO2 and ZnO on three-dimensional nanofibrous network template is accomplished. Ultrafine control over nanotube diameter allows robust and systematic evaluation of the electrochemical properties of TiO2 and ZnO nanonetworks in terms of size-function relationship. We observe hypsochromic shift in UV absorbance maxima correlated with decrease in wall thickness of the nanotubes. Photocatalytic activities of anatase TiO2 and hexagonal wurtzite ZnO nanonetworks are found to be dependent on both the wall thickness and total surface area per unit of mass. Wall thickness has effect on photoexcitation properties of both TiO2 and ZnO due to band gap energies and total surface area per unit of mass. The present work is a successful example that concentrates on nanofabrication of intact three-dimensional semiconductor nanonetworks with controlled band gap energies.
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Affiliation(s)
- Hakan Ceylan
- Institute of Materials Science and Nanotechnology, National Nanotechnology Research Center (UNAM), Bilkent University, Ankara 06800, Turkey
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30
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Liu C, Jiang Z, Tong Z, Li Y, Yang D. Biomimetic synthesis of inorganic nanocomposites by a de novo designed peptide. RSC Adv 2014. [DOI: 10.1039/c3ra44630a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
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31
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Genc R, Clergeaud G, Ortiz M, O'Sullivan C. Shape directed biomineralization of gold nanoparticles using self-assembled lipid structures. Biomater Sci 2014; 2:1128-1134. [DOI: 10.1039/c4bm00025k] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Lipid nanostructures including rectangular, hexagonal disks and twisted ribbons were used as soft matter templates for the biomineralization of gold.
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Affiliation(s)
- Rukan Genc
- Department of Chemical Engineering
- University of Mersin
- Mersin, Turkey
| | - Gael Clergeaud
- Nanobiotechnology and Bioanalysis Group
- Department of Chemical Engineering
- Tarragona, Spain
| | - Mayreli Ortiz
- Nanobiotechnology and Bioanalysis Group
- Department of Chemical Engineering
- Tarragona, Spain
| | - Ciara O'Sullivan
- Nanobiotechnology and Bioanalysis Group
- Department of Chemical Engineering
- Tarragona, Spain
- Institució Catalana de Recerca i Estudis Avançats
- Passeig Lluís Companys 23
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32
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Tong Z, Jiang Y, Yang D, Shi J, Zhang S, Liu C, Jiang Z. Biomimetic and bioinspired synthesis of titania and titania-based materials. RSC Adv 2014. [DOI: 10.1039/c3ra47336h] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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33
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Yan J, Pan Y, Cheetham AG, Lin YA, Wang W, Cui H, Liu CJ. One-step fabrication of self-assembled peptide thin films with highly dispersed noble metal nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2013; 29:16051-7. [PMID: 24320975 DOI: 10.1021/la4036908] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Fabrication of organic thin films with highly dispersed inorganic nanoparticles is a very challenging topic. In this work, a new approach that combines electron-induced molecular self-assembly with simultaneous nanoparticle formation by room temperature electron reduction was developed to prepare peptide thin films with highly dispersed noble metal nanoparticles. Argon glow discharge was employed as the resource of electrons. The peptide motif KLVFF (Aβ16-20) self-assembled into two-dimensional membranes under the influence of hydrated electrons, while the metal ions in solution can be simultaneously reduced by electrons to form nanoparticles. Our TEM imaging reveals that metal nanoparticles were well-distributed in the resulting peptide thin films. Our results also suggest that the size of metal nanoparticles can be tuned by varying the initial concentration of the metal ion. This simple approach can be viewed as a promising strategy to create hybrid thin films that integrate functional inorganics into biomolecule scaffolds.
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Affiliation(s)
- Jinmao Yan
- Collaborative Innovation Center of Chemical Science and Engineering, School of Chemical Engineering and Technology, Tianjin University , Tianjin 300072, China
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34
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Khalily MA, Ustahuseyin O, Garifullin R, Genc R, Guler MO. A supramolecular peptide nanofiber templated Pd nanocatalyst for efficient Suzuki coupling reactions under aqueous conditions. Chem Commun (Camb) 2013; 48:11358-60. [PMID: 23073371 DOI: 10.1039/c2cc36228g] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A bioinspired peptide amphiphile nanofiber template for formation of one-dimensional Pd nanostructures is demonstrated. The Pd and peptide nanocatalyst system enabled efficient catalytic activity in Suzuki coupling reactions in water at room temperature. The nanocatalyst system can be easily separated and reused in successive reactions without significant loss in activity and structural integrity.
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Affiliation(s)
- Mohammad Aref Khalily
- Institute of Materials Science and Nanotechnology, National Nanotechnology Research Centre, Bilkent University, Ankara, Turkey 06800
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35
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Yuan JJ, Zhu PX, Noda D, Jin RH. Controlled synthesis and tunable properties of ultrathin silica nanotubes through spontaneous polycondensation on polyamine fibrils. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2013; 4:793-804. [PMID: 24367748 PMCID: PMC3869340 DOI: 10.3762/bjnano.4.90] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Accepted: 11/06/2013] [Indexed: 05/08/2023]
Abstract
This paper describes a facile approach to a biomimetic rapid fabrication of ultrathin silica nanotubes with a highly uniform diameter of 10 nm and inner hollow of around 3 nm. The synthesis is carried out through a spontaneous polycondensation of alkoxysilane on polyamine crystalline fibrils that were conveniently produced from the neutralization of a solution of protonated linear polyethyleneimine (LPEI-H(+)) by alkali compounds. A simple mixing the fibrils with alkoxysilane in aqueous solution allowed for the rapid formation of silica to produce LPEI@silica hybrid nanotubes. These 10-nm nanotubes were hierarchically organized in a mat-like morphology with a typical size of 1-2 micrometers. The subsequent removal of organic LPEI via calcination resulted in silica nanotubes that keep this morphology. The morphology, the structure, the pore properties and the formation mechanism of the silica nanotubes were carefully investigated with scanning electron microscopy (SEM), transmission electron microscopy (TEM), Brunauer-Emmett-Teller measurements (BET), and X-ray diffraction (XRD). Detailed studies demonstrated that the formation of the nanotubes depends on the molar ratio of [OH]/[CH2CH2NH] during the neutralization as well as on the basicity of the alkali compound and on the concentration of the silica source. The synthesis of silica nanotubes established here could be easily applied to a fabrication on the kilogram scale. Silica nanotubes that were obtained from the calcination of hybrid nanotubes of LPEI@silica in an N2 atmosphere showed a distinct photoluminescence centered at 540 nm with a maximum excitation wavelength of 320 nm. Furthermore, LPEI@silica hybrid nanotubes were applied to create silica-carbon composite nanotubes by alternative adsorption of ionic polymers and subsequent carbonization.
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Affiliation(s)
- Jian-Jun Yuan
- Synthetic Chemistry Lab., Kawamura Institute of Chemical Research, 631 Sakado, Sakura, 285-0078, Japan
| | - Pei-Xin Zhu
- Synthetic Chemistry Lab., Kawamura Institute of Chemical Research, 631 Sakado, Sakura, 285-0078, Japan
| | - Daisuke Noda
- Synthetic Chemistry Lab., Kawamura Institute of Chemical Research, 631 Sakado, Sakura, 285-0078, Japan
| | - Ren-Hua Jin
- Department of Material and Life Chemistry, Kanagawa University, and JST-CREST 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
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36
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Acar H, Genc R, Urel M, Erkal TS, Dana A, Guler MO. Self-assembled peptide nanofiber templated one-dimensional gold nanostructures exhibiting resistive switching. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:16347-54. [PMID: 23110318 DOI: 10.1021/la3035215] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
An amyloid-like peptide molecule self-assembling into one-dimensional nanofiber structure in ethanol was designed and synthesized with functional groups that can bind to gold ions. The peptide nanofibers were used as templates for nucleation and growth of one-dimensional gold nanostructures in the presence of ascorbic acid as reducing agent. We performed multistep seed-mediated synthesis of gold nanoparticles by changing peptide/gold precursor and peptide/reducing agent ratios. Gold nanostructures with a wide range of morphologies such as smooth nanowires, noodle-like one-dimensional nanostructures, and uniform aggregates of spherical nanoparticles were synthesized by use of an environmentally friendly synthesis method. Nanoscale electrical properties of gold-peptide nanofibers were investigated using atomic force microscopy. Bias dependent current (IV) measurements on thin films of gold-peptide nanofiber hybrid revealed tunneling dominated transport and resistive switching. Gold-peptide nanofiber composite nanostructures can provide insight into electrical conduction in biomolecular/inorganic composites, highlighting their potential applications in electronics and optics.
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Affiliation(s)
- Handan Acar
- Institute of Materials Science and Nanotechnology, National Nanotechnology Research Center (UNAM), Bilkent University, Ankara, 06800, Turkey
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37
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Kasotakis E, Mitraki A. Silica biotemplating by self-assembling peptides via serine residues activated by the peptide amino terminal group. Biopolymers 2012. [DOI: 10.1002/bip.22091] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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38
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Akyildiz HI, Padbury RP, Parsons GN, Jur JS. Temperature and exposure dependence of hybrid organic-inorganic layer formation by sequential vapor infiltration into polymer fibers. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:15697-15704. [PMID: 23050951 DOI: 10.1021/la302991c] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The characteristic processing behavior for growth of a conformal nanoscale hybrid organic-inorganic modification to polyamide 6 (PA6) by sequential vapor infiltration (SVI) is demonstrated. The SVI process is a materials growth technique by which exposure of organometallic vapors to a polymeric material promotes the formation of a hybrid organic-inorganic modification at the near surface region of the polymer. This work investigates the SVI exposure temperature and cycling times of sequential exposures of trimethylaluminum (TMA) on PA6 fiber mats. The result of TMA exposure is the preferential subsurface organic-inorganic growth by diffusion into the polymer and reaction with the carbonyl in PA6. Mass gain, infrared spectroscopy, and transmission electron microscopy analysis indicate enhanced materials growth and uniformity at lower processing temperatures. The inverse relationship between mass gain and exposure temperature is explained by the formation of a hybrid layer that prevents the diffusion of TMA into the polymer to react with the PA6 upon subsequent exposure cycles. As few as 10 SVI exposure cycles are observed to saturate the growth, yielding a modified thickness of ∼75 nm and mass increase of ∼14 wt %. Removal of the inherent PA6 moisture content reduces the mass gain by ∼4 wt % at low temperature exposures. The ability to understand the characteristic growth process is critical for the development of the hybrid materials fabrication and modification techniques.
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Affiliation(s)
- Halil I Akyildiz
- Department of Textile Engineering, Chemistry and Science, North Carolina State University, Raleigh, 27695, United States
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Cinar G, Ceylan H, Urel M, Erkal TS, Deniz Tekin E, Tekinay AB, Dâna A, Guler MO. Amyloid inspired self-assembled peptide nanofibers. Biomacromolecules 2012; 13:3377-87. [PMID: 22984884 DOI: 10.1021/bm301141h] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Amyloid peptides are important components in many degenerative diseases as well as in maintaining cellular metabolism. Their unique stable structure provides new insights in developing new materials. Designing bioinspired self-assembling peptides is essential to generate new forms of hierarchical nanostructures. Here we present oppositely charged amyloid inspired peptides (AIPs), which rapidly self-assemble into nanofibers at pH 7 upon mixing in water caused by noncovalent interactions. Mechanical properties of the gels formed by self-assembled AIP nanofibers were analyzed with oscillatory rheology. AIP gels exhibited strong mechanical characteristics superior to gels formed by self-assembly of previously reported synthetic short peptides. Rheological studies of gels composed of oppositely charged mixed AIP molecules (AIP-1 + 2) revealed superior mechanical stability compared to individual peptide networks (AIP-1 and AIP-2) formed by neutralization of net charges through pH change. Adhesion and elasticity properties of AIP mixed nanofibers and charge neutralized AIP-1, AIP-2 nanofibers were analyzed by high resolution force-distance mapping using atomic force microscopy (AFM). Nanomechanical characterization of self-assembled AIP-1 + 2, AIP-1, and AIP-2 nanofibers also confirmed macroscopic rheology results, and mechanical stability of AIP mixed nanofibers was higher compared to individual AIP-1 and AIP-2 nanofibers self-assembled at acidic and basic pH, respectively. Experimental results were supported with molecular dynamics simulations by considering potential noncovalent interactions between the amino acid residues and possible aggregate forms. In addition, HUVEC cells were cultured on AIP mixed nanofibers at pH 7 and biocompatibility and collagen mimetic scaffold properties of the nanofibrous system were observed. Encapsulation of a zwitterionic dye (rhodamine B) within AIP nanofiber network was accomplished at physiological conditions to demonstrate that this network can be utilized for inclusion of soluble factors as a scaffold for cell culture studies.
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Walter M, Cheval N, Liszka O, Malkoch M, Fahmi A. Hybrid one-dimensional nanostructures: one-pot preparation of nanoparticle chains via directed self-assembly of in situ synthesized discrete Au nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:5947-55. [PMID: 22432448 PMCID: PMC3322556 DOI: 10.1021/la3000526] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
The fabrication of well-defined one-dimensional (1D) arrays is becoming a challenge for the development of the next generation of advanced nanodevices. Herein, a simple concept is proposed for the in situ synthesis and self-assembly of gold nanoparticles (AuNPs) into 1D arrays via a one-step process. The results demonstrated the formation of nanoparticle chains (NPC) with high aspect ratio based on discrete Au nanoparticles stabilized by short thiol ligands. A model was proposed to explain the self-assembly based on the investigation of several parameters such as pH, solvent, temperature, and nature of the ligand on the 1D assembly formation. Hydrogen bonding was identified as a key factor to direct the self-assembly of the hybrid organic-inorganic nanomaterials into the well-defined 1D nanostructures. This simple and cost-effective concept could potentially be extended to the fabrication of a variety of hybrid 1D nanostructures possessing unique physical properties leading to a wide range of applications including catalysis, bionanotechnology, nanoelectronics, and photonics.
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Affiliation(s)
- Marie
V. Walter
- School of Chemical
Science and
Engineering, Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100, 44 Stockholm,
Sweden
| | - Nicolas Cheval
- Division of Mechanical,
Materials
and Manufacturing Engineering, University of Nottingham, NG7 2RD, United Kingdom
| | - Olimpia Liszka
- Division of Mechanical,
Materials
and Manufacturing Engineering, University of Nottingham, NG7 2RD, United Kingdom
| | - Michael Malkoch
- School of Chemical
Science and
Engineering, Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100, 44 Stockholm,
Sweden
- (M.M.)
Telephone: +46 8
790 8768. E-mail: . (A.F.) Telephone: +49 2821 806 73 634. E-mail:
| | - Amir Fahmi
- Division of Mechanical,
Materials
and Manufacturing Engineering, University of Nottingham, NG7 2RD, United Kingdom
- Faculty of Technology and Bionics, Rhein-Waal University
of Applied Sciences, Nollenburgerweg
115, D-46446 Emmerich, Germany
- (M.M.)
Telephone: +46 8
790 8768. E-mail: . (A.F.) Telephone: +49 2821 806 73 634. E-mail:
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Mammadov R, Tekinay AB, Dana A, Guler MO. Microscopic characterization of peptide nanostructures. Micron 2012; 43:69-84. [DOI: 10.1016/j.micron.2011.07.006] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2011] [Revised: 07/07/2011] [Accepted: 07/08/2011] [Indexed: 10/18/2022]
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42
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Shimada T, Tamura Y, Tirrell M, Kuroda K. A Novel Preparative Method of Silica Nanotubes by Utilizing Self-assembly and Disassembly of Peptide Amphiphiles. CHEM LETT 2012. [DOI: 10.1246/cl.2012.95] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Tomoko Shimada
- Department of Applied Chemistry, Faculty of Science and Engineering, Waseda University
- Asahi Kasei Co
| | - Yasuhiro Tamura
- Department of Applied Chemistry, Faculty of Science and Engineering, Waseda University
| | | | - Kazuyuki Kuroda
- Department of Applied Chemistry, Faculty of Science and Engineering, Waseda University
- Kagami Memorial Research Institute for Materials Science and Technology, Waseda University
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43
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Wang F, Jiang F, Li Y, Wang Q, Zhang X. Formation of new biosilica-like structures by flow-induced forces. RSC Adv 2012. [DOI: 10.1039/c2ra20127e] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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44
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Li N, Zhang X, Wang Q, Wang F, Shen P. Biomimetic synthesis of silica hollow spheres using poly (l-lysine) and mechanism research. RSC Adv 2012. [DOI: 10.1039/c2ra00019a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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45
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Tomizaki KY, Ahn SA, Imai T. Synthesis of Silica Nanofibers Templated by Self-Assembled Peptide Nanostructures. ACTA ACUST UNITED AC 2012. [DOI: 10.14723/tmrsj.37.541] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Kin-ya Tomizaki
- Innovative Materials and Processing Research Center Ryukoku University
- Department of Materials Chemistry, Ryukoku University
| | - Soo-Ang Ahn
- Department of Materials Chemistry, Ryukoku University
| | - Takahito Imai
- Department of Materials Chemistry, Ryukoku University
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Yildirim A, Acar H, Erkal TS, Bayindir M, Guler MO. Template-directed synthesis of silica nanotubes for explosive detection. ACS APPLIED MATERIALS & INTERFACES 2011; 3:4159-4164. [PMID: 21942571 DOI: 10.1021/am201024w] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Fluorescent porous organic-inorganic thin films are of interest of explosive detection because of their vapor phase fluorescence quenching property. In this work, we synthesized fluorescent silica nanotubes using a biomineralization process through self-assembled peptidic nanostructures. We designed and synthesized an amyloid-like peptide self-assembling into nanofibers to be used as a template for silica nanotube formation. The amine groups on the peptide nanofibrous system were used for nucleation of silica nanostructures. Silica nanotubes were used to prepare highly porous surfaces, and they were doped with a fluorescent dye by physical adsorption for explosive sensing. These porous surfaces exhibited fast, sensitive, and highly selective fluorescence quenching against nitro-explosive vapors. The materials developed in this work have vast potential in sensing applications due to enhanced surface area.
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Affiliation(s)
- Adem Yildirim
- Institute of Materials Science and Nanotechnology, Bilkent University, 06800 Ankara, Turkey
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