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Kekic M, Hanson KL, Perumal AS, Solana G, Rajendran K, Dash S, Nicolau DV, Dobroiu S, Dos Remedios CG, Nicolau DV. Biosensing using antibody-modulated motility of actin filaments on myosin-coated surfaces. Biosens Bioelectron 2024; 246:115879. [PMID: 38056344 DOI: 10.1016/j.bios.2023.115879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 11/11/2023] [Accepted: 11/22/2023] [Indexed: 12/08/2023]
Abstract
Motor proteins, such as myosin and kinesin, are biological molecular motors involved in force generation and intracellular transport within living cells. The characteristics of molecular motors, i.e., their motility over long distances, their capacity of transporting cargoes, and their very efficient energy consumption, recommend them as potential operational elements of a new class of dynamic nano-devices, with potential applications in biosensing, analyte concentrators, and biocomputation. A possible design of a biosensor based on protein molecular motor comprises a surface with immobilized motors propelling cytoskeletal filaments, which are decorated with antibodies, presented as side-branches. Upon biomolecular recognition of these branches by secondary antibodies, the 'extensions' on the cytoskeletal filaments can achieve considerable lengths (longer than several diameters of the cytoskeletal filament carrier), thus geometrically impairing or halting motility. Because the filaments are several micrometers long, this sensing mechanism converts an event in the nanometer range, i.e., antibody-antigen sizes, into an event in the micrometer range: the visualization of the halting of motility of microns-long cytoskeletal filaments. Here we demonstrate the proof of concept of a sensing system comprising heavy-mero-myosin immobilized on surfaces propelling actin filaments decorated with actin antibodies, whose movement is halted upon the recognition with secondary anti-actin antibodies. Because antibodies to the actin-myosin system are involved in several rare diseases, the first possible application for such a device may be their prognosis and diagnosis. The results also provide insights into guidelines for designing highly sensitive and very fast biosensors powered by motor proteins.
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Affiliation(s)
- Murat Kekic
- Muscle Research Unit, Department of Anatomy, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Kristi L Hanson
- BioNanoEngineering Labs, Faculty of Engineering and Industrial Science, Swinburne University of Technology, Hawthorn, VIC, 3122, Australia
| | | | - Gerardin Solana
- BioNanoEngineering Labs, Faculty of Engineering and Industrial Science, Swinburne University of Technology, Hawthorn, VIC, 3122, Australia
| | - Kavya Rajendran
- Department of Bioengineering, Faculty of Engineering, McGill University, Montreal, Quebec, H3A 0C3, Canada
| | - Shantoshini Dash
- Department of Bioengineering, Faculty of Engineering, McGill University, Montreal, Quebec, H3A 0C3, Canada
| | - Dan V Nicolau
- BioNanoEngineering Labs, Faculty of Engineering and Industrial Science, Swinburne University of Technology, Hawthorn, VIC, 3122, Australia; Peter Gorer Department of Immunobiology, School of Immunology & Microbial Sciences, Faculty of Life Sciences & Medicine, King's College London, London SE1 1UL, UK
| | - Serban Dobroiu
- Department of Bioengineering, Faculty of Engineering, McGill University, Montreal, Quebec, H3A 0C3, Canada
| | - Cristobal G Dos Remedios
- Muscle Research Unit, Department of Anatomy, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Dan V Nicolau
- BioNanoEngineering Labs, Faculty of Engineering and Industrial Science, Swinburne University of Technology, Hawthorn, VIC, 3122, Australia; Department of Bioengineering, Faculty of Engineering, McGill University, Montreal, Quebec, H3A 0C3, Canada.
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2
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Månsson A. The potential of myosin and actin in nanobiotechnology. J Cell Sci 2023; 136:292584. [PMID: 36861886 DOI: 10.1242/jcs.261025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2023] Open
Abstract
Since the late 1990s, efforts have been made to utilize cytoskeletal filaments, propelled by molecular motors, for nanobiotechnological applications, for example, in biosensing and parallel computation. This work has led to in-depth insights into the advantages and challenges of such motor-based systems, and has yielded small-scale, proof-of-principle applications but, to date, no commercially viable devices. Additionally, these studies have also elucidated fundamental motor and filament properties, as well as providing other insights obtained from biophysical assays in which molecular motors and other proteins are immobilized on artificial surfaces. In this Perspective, I discuss the progress towards practically viable applications achieved so far using the myosin II-actin motor-filament system. I also highlight several fundamental pieces of insights derived from the studies. Finally, I consider what may be required to achieve real devices in the future or at least to allow future studies with a satisfactory cost-benefit ratio.
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Affiliation(s)
- Alf Månsson
- Department of Chemistry and Biomedical Science, Linnaeus University, SE-391 82 Kalmar, Sweden
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3
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Effects of defective motors on the active transport in biosensors powered by biomolecular motors. Biosens Bioelectron 2022; 203:114011. [DOI: 10.1016/j.bios.2022.114011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Revised: 12/30/2021] [Accepted: 01/14/2022] [Indexed: 11/20/2022]
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4
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Kang'iri SM, Nitta T. Motility resilience of molecular shuttles against defective motors. IEEE Trans Nanobioscience 2022; 21:439-444. [PMID: 35471882 DOI: 10.1109/tnb.2022.3170562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Myosin and kinesin are biomolecular motors found in living cells. By propelling their associated cytoskeletal filaments, these biomolecular motors facilitate force generation and material transport in the cells. When extracted, the biomolecular motors are promising candidates for in vitro applications such as biosensor devices, on account of their high operating efficiency and nanoscale size. However, during integration into these devices, some of the motors become defective due to unfavorable adhesion to the substrate surface. These defective motors inhibit the motility of the cytoskeletal filaments which make up the molecular shuttles used in the devices. Difficulties in controlling the fraction of active and defective motors in experiments discourage systematic studies concerning the resilience of the molecular shuttle motility against the impedance of defective motors. Here, we used mathematical modelling to systematically examine the resilience of the propulsion by these molecular shuttles against the impedance of the defective motors. The model showed that the fraction of active motors on the substrate is the essential factor determining the resilience of the molecular shuttle motility. Approximately 40% of active kinesin or 80% of active myosin motors are required to constitute continuous gliding of molecular shuttles in their respective substrates. The simplicity of the mathematical model in describing motility behavior offers utility in elucidating the mechanisms of the motility resilience of molecular shuttles.
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5
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Linking path and filament persistence lengths of microtubules gliding over kinesin. Sci Rep 2022; 12:3081. [PMID: 35197505 PMCID: PMC8866476 DOI: 10.1038/s41598-022-06941-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Accepted: 02/02/2022] [Indexed: 02/06/2023] Open
Abstract
Microtubules and kinesin motor proteins are involved in intracellular transports in living cells. Such intracellular material transport systems can be reconstructed for utilisation in synthetic environments, and they are called molecular shuttles driven by kinesin motors. The performance of the molecular shuttles depends on the nature of their trajectories, which can be characterized by the path persistence length of microtubules. It has been theoretically predicted that the path persistence length should be equal to the filament persistence length of the microtubules, where the filament persistence length is a measure of microtubule flexural stiffness. However, previous experiments have shown that there is a significant discrepancy between the path and filament persistence lengths. Here, we showed how this discrepancy arises by using computer simulation. By simulating molecular shuttle movements under external forces, the discrepancy between the path and filament persistence lengths was reproduced as observed in experiments. Our close investigations of molecular shuttle movements revealed that the part of the microtubules bent due to the external force was extended more than it was assumed in the theory. By considering the extended length, we could elucidate the discrepancy. The insights obtained here are expected to lead to better control of molecular shuttle movements.
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6
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Affiliation(s)
- Gadiel Saper
- Department of Biomedical Engineering, Columbia University, New York, New York 10027, United States
| | - Henry Hess
- Department of Biomedical Engineering, Columbia University, New York, New York 10027, United States
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7
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Stoychev G, Reuther C, Diez S, Ionov L. Controlled Retention and Release of Biomolecular Transport Systems Using Shape-Changing Polymer Bilayers. Angew Chem Int Ed Engl 2016; 55:16106-16109. [PMID: 27882699 DOI: 10.1002/anie.201608299] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Revised: 10/02/2016] [Indexed: 11/11/2022]
Abstract
Biomolecular transport systems based on cytoskeletal filaments and motor proteins have become promising tools for a wide range of nanotechnological applications. In this paper, we report control of such transport systems using substrates with switchable shape. We demonstrate this approach on the example of microtubules gliding on surfaces of self-folding polymer bilayers with adsorbed kinesin motors. The polymer bilayers are able to undergo reversible transitions between flat and tube-like shapes that allow the externally controlled retention and release of gliding microtubules. The demonstrated approach, based on surfaces with reconfigurable topography, opens broad perspectives to control biomolecular transport systems for bioanalytical and sensing applications, as well as for the construction of subcellular compartments in the field of synthetic biology.
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Affiliation(s)
- Georgi Stoychev
- College of Engineering, College of Family and Consumer Sciences, University of Georgia, Athens, GA, 30602, USA.,Leibniz Institute of Polymer Research e.V. Dresden, Hohe Str. 6, 01069, Dresden, Germany
| | - Cordula Reuther
- B CUBE-Center for Molecular Bioengineering, Technische Universität Dresden and Max-Planck-Institute of Molecular Cell Biology and Genetics, 01307, Dresden, Germany
| | - Stefan Diez
- B CUBE-Center for Molecular Bioengineering, Technische Universität Dresden and Max-Planck-Institute of Molecular Cell Biology and Genetics, 01307, Dresden, Germany
| | - Leonid Ionov
- College of Engineering, College of Family and Consumer Sciences, University of Georgia, Athens, GA, 30602, USA.,Leibniz Institute of Polymer Research e.V. Dresden, Hohe Str. 6, 01069, Dresden, Germany
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8
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Stoychev G, Reuther C, Diez S, Ionov L. Controlled Retention and Release of Biomolecular Transport Systems Using Shape-Changing Polymer Bilayers. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201608299] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Georgi Stoychev
- College of Engineering, College of Family and Consumer Sciences; University of Georgia; Athens GA 30602 USA
- Leibniz Institute of Polymer Research e.V. Dresden; Hohe Str. 6 01069 Dresden Germany
| | - Cordula Reuther
- B CUBE-Center for Molecular Bioengineering; Technische Universität Dresden and Max-Planck-Institute of Molecular Cell Biology and Genetics; 01307 Dresden Germany
| | - Stefan Diez
- B CUBE-Center for Molecular Bioengineering; Technische Universität Dresden and Max-Planck-Institute of Molecular Cell Biology and Genetics; 01307 Dresden Germany
| | - Leonid Ionov
- College of Engineering, College of Family and Consumer Sciences; University of Georgia; Athens GA 30602 USA
- Leibniz Institute of Polymer Research e.V. Dresden; Hohe Str. 6 01069 Dresden Germany
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9
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Bengtsson E, Persson M, Rahman MA, Kumar S, Takatsuki H, Månsson A. Myosin-Induced Gliding Patterns at Varied [MgATP] Unveil a Dynamic Actin Filament. Biophys J 2016; 111:1465-1477. [PMID: 27705769 PMCID: PMC5052455 DOI: 10.1016/j.bpj.2016.08.025] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2016] [Revised: 08/18/2016] [Accepted: 08/22/2016] [Indexed: 11/29/2022] Open
Abstract
Actin filaments have key roles in cell motility but are generally claimed to be passive interaction partners in actin-myosin-based motion generation. Here, we present evidence against this static view based on an altered myosin-induced actin filament gliding pattern in an in vitro motility assay at varied [MgATP]. The statistics that characterize the degree of meandering of the actin filament paths suggest that for [MgATP] ≥ 0.25 mM, the flexural rigidity of heavy meromyosin (HMM)-propelled actin filaments is similar (without phalloidin) or slightly lower (with phalloidin) than that of HMM-free filaments observed in solution without surface tethering. When [MgATP] was reduced to ≤0.1 mM, the actin filament paths in the in vitro motility assay became appreciably more winding in both the presence and absence of phalloidin. This effect of lowered [MgATP] was qualitatively different from that seen when HMM was mixed with ATP-insensitive, N-ethylmaleimide-treated HMM (NEM-HMM; 25-30%). In particular, the addition of NEM-HMM increased a non-Gaussian tail in the path curvature distribution as well as the number of events in which different parts of an actin filament followed different paths. These effects were the opposite of those observed with reduced [MgATP]. Theoretical modeling suggests a 30-40% lowered flexural rigidity of the actin filaments at [MgATP] ≤ 0.1 mM and local bending of the filament front upon each myosin head attachment. Overall, the results fit with appreciable structural changes in the actin filament during actomyosin-based motion generation, and modulation of the actin filament mechanical properties by the dominating chemomechanical actomyosin state.
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Affiliation(s)
- Elina Bengtsson
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
| | - Malin Persson
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
| | - Mohammad A Rahman
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
| | - Saroj Kumar
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
| | - Hideyo Takatsuki
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
| | - Alf Månsson
- Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden.
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10
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Kumar S, Milani G, Takatsuki H, Lana T, Persson M, Frasson C, te Kronnie G, Månsson A. Sensing protein antigen and microvesicle analytes using high-capacity biopolymer nano-carriers. Analyst 2015; 141:836-46. [PMID: 26617251 DOI: 10.1039/c5an02377g] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Lab-on-a-chip systems with molecular motor driven transport of analytes attached to cytoskeletal filament shuttles (actin filaments, microtubules) circumvent challenges with nanoscale liquid transport. However, the filaments have limited cargo-carrying capacity and limitations either in transportation speed (microtubules) or control over motility direction (actin). To overcome these constraints we here report incorporation of covalently attached antibodies into self-propelled actin bundles (nanocarriers) formed by cross-linking antibody conjugated actin filaments via fascin, a natural actin-bundling protein. We demonstrate high maximum antigen binding activity and propulsion by surface adsorbed myosin motors. Analyte transport capacity is tested using both protein antigens and microvesicles, a novel class of diagnostic markers. Increased incubation concentration with protein antigen in the 0.1-100 nM range (1 min) reduces the fraction of motile bundles and their velocity but maximum transportation capacity of >1 antigen per nm of bundle length is feasible. At sub-nanomolar protein analyte concentration, motility is very well preserved opening for orders of magnitude improved limit of detection using motor driven concentration on nanoscale sensors. Microvesicle-complexing to monoclonal antibodies on the nanocarriers compromises motility but nanocarrier aggregation via microvesicles shows unique potential in label-free detection with the aggregates themselves as non-toxic reporter elements.
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Affiliation(s)
- Saroj Kumar
- Department of Chemistry and Biomedical Sciences, Linnaeus University, SE-391 82 Kalmar, Sweden.
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11
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Affiliation(s)
- Sundus Erbas-Cakmak
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - David A. Leigh
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Charlie T. McTernan
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Alina
L. Nussbaumer
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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12
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Ishigure Y, Nitta T. Simulating an Actomyosin in Vitro Motility Assay: Toward the Rational Design of Actomyosin-Based Microtransporters. IEEE Trans Nanobioscience 2015; 14:641-8. [PMID: 26087497 DOI: 10.1109/tnb.2015.2443373] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
We present a simulation study of an actomyosin in vitro motility assay. In vitro motility assays have served as an essential element facilitating the application of actomyosin in nanotechnology; such applications include biosensors and biocomputation. Although actomyosin in vitro motility assays have been extensively investigated, some ambiguities remain, as a result of the limited spatio-temporal resolution and unavoidable uncertainties associated with the experimental process. These ambiguities hamper the rational design of nanodevices for practical applications. Here, with the aim of moving toward a rational design process, we developed a 3D computer simulation method of an actomyosin in vitro motility assay, based on a Brownian dynamics simulation. The simulation explicitly included the ATP hydrolysis cycle of myosin. The simulation was validated by the reproduction of previous experimental results. More importantly, the simulation provided new insights that are difficult to obtain experimentally, including data on the number of myosin motors actually binding to actin filaments, the mechanism responsible for the guiding of actin filaments by chemical edges, and the effect of the processivity of motor proteins on the guiding probabilities. The simulations presented here will be useful in interpreting experimental results, and also in designing future nanodevices integrated with myosin motors.
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13
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Hajne J, Hanson KL, van Zalinge H, Nicolau DV. Motility of Actin Filaments on Micro-Contact Printed Myosin Patterns. IEEE Trans Nanobioscience 2015; 14:313-22. [DOI: 10.1109/tnb.2015.2393052] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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14
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Ishigure Y, Nitta T. Understanding the guiding of kinesin/microtubule-based microtransporters in microfabricated tracks. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2014; 30:12089-12096. [PMID: 25238638 DOI: 10.1021/la5021884] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Microtransporters using cargo-laden microtubules propelled by kinesin motors are attractive for numerous applications in nanotechnology. To improve the efficiency of transport, the movement of microtubules must be guided by microfabricated tracks. However, the mechanisms of the guiding methods used are not fully understood. Here, using computer simulation, we systematically studied the guiding of such microtransporters by three different types of guiding methods: a chemical boundary, a physical barrier, and their combination. The simulation reproduced the probabilities of guiding previously observed experimentally for the three methods. Moreover, the simulation provided further insight into the mechanisms of guiding, which overturn previous assumptions and models.
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Affiliation(s)
- Yuki Ishigure
- Department of Mathematical Design and Engineering and ‡Applied Physics Course, Gifu University , Gifu 501-1193, Japan
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15
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Takatsuki H, Bengtsson E, Månsson A. Persistence length of fascin-cross-linked actin filament bundles in solution and the in vitro motility assay. Biochim Biophys Acta Gen Subj 2014; 1840:1933-42. [PMID: 24418515 DOI: 10.1016/j.bbagen.2014.01.012] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2013] [Revised: 01/05/2014] [Accepted: 01/06/2014] [Indexed: 11/16/2022]
Abstract
BACKGROUND Bundles of unipolar actin filaments (F-actin), cross-linked via the actin-binding protein fascin, are important in filopodia of motile cells and stereocilia of inner ear sensory cells. However, such bundles are also useful as shuttles in myosin-driven nanotechnological applications. Therefore, and for elucidating aspects of biological function, we investigate if the bundle tendency to follow straight paths (quantified by path persistence length) when propelled by myosin motors is directly determined by material properties quantified by persistence length of thermally fluctuating bundles. METHODS Fluorescent bundles, labeled with rhodamine-phalloidin, were studied at fascin:actin molar ratios: 0:1 (F-actin), 1:7, 1:4 and 1:2. Persistence lengths (Lp) were obtained by fitting the cosine correlation function (CCF) to a single exponential function: <cos(θ(0)-θ(s))>=exp(-s/(2Lp)) where θ(s) is tangent angle; s: path or contour lengths. < > denotes averaging over filaments. RESULTS Bundle-Lp (bundles<15μm long) increased from ~10 to 150μm with increased fascin:actin ratio. The increase was similar for path-Lp (path<15μm), with highly linear correlation. For longer bundle paths, the CCF-decay deviated from a single exponential, consistent with superimposition of the random path with a circular path as suggested by theoretical analysis. CONCLUSIONS Fascin-actin bundles have similar path-Lp and bundle-Lp, both increasing with fascin:actin ratio. Path-Lp is determined by the flexural rigidity of the bundle. GENERAL SIGNIFICANCE The findings give general insight into mechanics of cytoskeletal polymers that interact with molecular motors, aid rational development of nanotechnological applications and have implications for structure and in vivo functions of fascin-actin bundles.
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Affiliation(s)
- Hideyo Takatsuki
- Department of Chemistry and Biomedical Sciences, Linnaeus University, Kalmar SE-391 82, Sweden
| | - Elina Bengtsson
- Department of Chemistry and Biomedical Sciences, Linnaeus University, Kalmar SE-391 82, Sweden
| | - Alf Månsson
- Department of Chemistry and Biomedical Sciences, Linnaeus University, Kalmar SE-391 82, Sweden.
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16
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Bengtsson E, Persson M, Månsson A. Analysis of flexural rigidity of actin filaments propelled by surface adsorbed myosin motors. Cytoskeleton (Hoboken) 2013; 70:718-28. [PMID: 24039103 PMCID: PMC4230416 DOI: 10.1002/cm.21138] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2013] [Revised: 08/08/2013] [Accepted: 08/22/2013] [Indexed: 11/09/2022]
Abstract
Actin filaments are central components of the cytoskeleton and the contractile machinery of muscle. The filaments are known to exist in a range of conformational states presumably with different flexural rigidity and thereby different persistence lengths. Our results analyze the approaches proposed previously to measure the persistence length from the statistics of the winding paths of actin filaments that are propelled by surface-adsorbed myosin motor fragments in the in vitro motility assay. Our results suggest that the persistence length of heavy meromyosin propelled actin filaments can be estimated with high accuracy and reproducibility using this approach provided that: (1) the in vitro motility assay experiments are designed to prevent bias in filament sliding directions, (2) at least 200 independent filament paths are studied, (3) the ratio between the sliding distance between measurements and the camera pixel-size is between 4 and 12, (4) the sliding distances between measurements is less than 50% of the expected persistence length, and (5) an appropriate cut-off value is chosen to exclude abrupt large angular changes in sliding direction that are complications, e.g., due to the presence of rigor heads. If the above precautions are taken the described method should be a useful routine part of in vitro motility assays thus expanding the amount of information to be gained from these.
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Affiliation(s)
- Elina Bengtsson
- Faculty of Health and Life Sciences, Linnaeus University, Kalmar, Sweden
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17
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Sunagawa T, Tanahashi A, Downs ME, Hess H, Nitta T. In silico evolution of guiding track designs for molecular shuttles powered by kinesin motors. LAB ON A CHIP 2013; 13:2827-2833. [PMID: 23685838 DOI: 10.1039/c3lc41103f] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Molecular shuttles powered by kinesin motors require guiding tracks to perform specific tasks in nanoscale devices. Here, using our simulation of molecular shuttle movements, we describe an in silico evolutionary design method that makes it possible to automatically design the guiding tracks in accordance with their functions defined by designers. With this design method, we designed two types of pre-existing guiding track modules with improved performances, as well as one with a novel function.
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Affiliation(s)
- Takuya Sunagawa
- Department of Mathematical and Design Engineering, Gifu University, 1-1 Yanagido, Gifu, 501-1193, Gifu, Japan
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18
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Lard M, Ten Siethoff L, Kumar S, Persson M, Te Kronnie G, Linke H, Månsson A. Ultrafast molecular motor driven nanoseparation and biosensing. Biosens Bioelectron 2013; 48:145-52. [PMID: 23672875 DOI: 10.1016/j.bios.2013.03.071] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2013] [Revised: 03/27/2013] [Accepted: 03/28/2013] [Indexed: 11/29/2022]
Abstract
Portable biosensor systems would benefit from reduced dependency on external power supplies as well as from further miniaturization and increased detection rate. Systems built around self-propelled biological molecular motors and cytoskeletal filaments hold significant promise in these regards as they are built from nanoscale components that enable nanoseparation independent of fluidic pumping. Previously reported microtubule-kinesin based devices are slow, however, compared to several existing biosensor systems. Here we demonstrate that this speed limitation can be overcome by using the faster actomyosin motor system. Moreover, due to lower flexural rigidity of the actin filaments, smaller features can be achieved compared to microtubule-based systems, enabling further miniaturization. Using a device designed through optimization by Monte Carlo simulations, we demonstrate extensive myosin driven enrichment of actin filaments on a detector area of less than 10 μm², with a concentration half-time of approximately 40 s. We also show accumulation of model analyte (streptavidin at nanomolar concentration in nanoliter effective volume) detecting increased fluorescence intensity within seconds after initiation of motor-driven transportation from capture regions. We discuss further optimizations of the system and incorporation into a complete biosensing workflow.
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Affiliation(s)
- Mercy Lard
- The Nanometer Structure Consortium (nmC@LU), Division of Solid State Physics, Lund University, SE-22100 Lund, Sweden
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19
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Fujimoto K, Kitamura M, Yokokawa M, Kanno I, Kotera H, Yokokawa R. Colocalization of quantum dots by reactive molecules carried by motor proteins on polarized microtubule arrays. ACS NANO 2013; 7:447-455. [PMID: 23230973 DOI: 10.1021/nn3045038] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The field of microfluidics has drastically contributed to downscale the size of benchtop experiments to the dimensions of a chip without compromising results. However, further miniaturization and the ability to directly manipulate individual molecules require a platform that permits organized molecular transport. The motor proteins and microtubules that carry out orderly intracellular transport are ideal for driving in vitro nanotransport. Here, we demonstrate that a reconstruction of the cellular kinesin/dynein-microtubule system in nanotracks provides a molecular total analysis system (MTAS) to control massively parallel chemical reactions. The mobility of kinesin and a microtubule dissociation method enable orientation of a microtubule in an array for directed transport of reactive molecules carried by kinesin or dynein. The binding of glutathione S-transferase (GST) to glutathione (GSH) and the binding of streptavidin to biotin are visualized as colocalizations of quantum dots (Q-dots) when motor motilities bring them into contact. The organized nanotransport demonstrated here suggests the feasibility of using our platform to perform parallel biochemical reactions focused at the molecular level.
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Affiliation(s)
- Kazuya Fujimoto
- Department of Micro Engineering, Kyoto University, Yoshida-Honmachi, Sakyo, Kyoto 606-8501, Japan
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20
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Effect of Path Persistence Length of Molecular Shuttles on Two-stage Analyte Capture in Biosensors. Cell Mol Bioeng 2012. [DOI: 10.1007/s12195-012-0262-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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21
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22
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Kumar S, ten Siethoff L, Persson M, Lard M, te Kronnie G, Linke H, Månsson A. Antibodies covalently immobilized on actin filaments for fast myosin driven analyte transport. PLoS One 2012; 7:e46298. [PMID: 23056279 PMCID: PMC3463588 DOI: 10.1371/journal.pone.0046298] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2012] [Accepted: 08/29/2012] [Indexed: 01/09/2023] Open
Abstract
Biosensors would benefit from further miniaturization, increased detection rate and independence from external pumps and other bulky equipment. Whereas transportation systems built around molecular motors and cytoskeletal filaments hold significant promise in the latter regard, recent proof-of-principle devices based on the microtubule-kinesin motor system have not matched the speed of existing methods. An attractive solution to overcome this limitation would be the use of myosin driven propulsion of actin filaments which offers motility one order of magnitude faster than the kinesin-microtubule system. Here, we realized a necessary requirement for the use of the actomyosin system in biosensing devices, namely covalent attachment of antibodies to actin filaments using heterobifunctional cross-linkers. We also demonstrated consistent and rapid myosin II driven transport where velocity and the fraction of motile actin filaments was negligibly affected by the presence of antibody-antigen complexes at rather high density (>20 µm(-1)). The results, however, also demonstrated that it was challenging to consistently achieve high density of functional antibodies along the actin filament, and optimization of the covalent coupling procedure to increase labeling density should be a major focus for future work. Despite the remaining challenges, the reported advances are important steps towards considerably faster nanoseparation than shown for previous molecular motor based devices, and enhanced miniaturization because of high bending flexibility of actin filaments.
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Affiliation(s)
- Saroj Kumar
- School of Natural Sciences, Linnaeus University, Kalmar, Sweden
| | | | - Malin Persson
- School of Natural Sciences, Linnaeus University, Kalmar, Sweden
| | - Mercy Lard
- The Nanometer Structure Consortium and Division of Solid State Physics, Lund University, Lund, Sweden
| | - Geertruy te Kronnie
- Department of Women’s and Children’s Health, University of Padua, Padova, Italy
| | - Heiner Linke
- The Nanometer Structure Consortium and Division of Solid State Physics, Lund University, Lund, Sweden
| | - Alf Månsson
- School of Natural Sciences, Linnaeus University, Kalmar, Sweden
- * E-mail:
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23
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Translational actomyosin research: fundamental insights and applications hand in hand. J Muscle Res Cell Motil 2012; 33:219-33. [PMID: 22638606 PMCID: PMC3413815 DOI: 10.1007/s10974-012-9298-5] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2012] [Accepted: 05/01/2012] [Indexed: 12/24/2022]
Abstract
This review describes the development towards actomyosin based nanodevices taking a starting point in pioneering studies in the 1990s based on conventional in vitro motility assays. References are given to parallel developments using the kinesin–microtubule motor system. The early developments focused on achieving cargo-transportation using actin filaments as cargo-loaded shuttles propelled by surface-adsorbed heavy meromyosin along micro- and nanofabricated channels. These efforts prompted extensive studies of surface–motor interactions contributing with new insights of general relevance in surface and colloid chemistry. As a result of these early efforts, a range of complex devices have now emerged, spanning applications in medical diagnostics, biocomputation and formation of complex nanostructures by self-organization. In addition to giving a comprehensive account of the developments towards real-world applications an important goal of the present review is to demonstrate important connections between the applied studies and fundamental biophysical studies of actomyosin and muscle function. Thus the manipulation of the motor proteins towards applications has resulted in new insights into methodological aspects of the in vitro motiliy assay. Other developments have advanced the understanding of the dynamic materials properties of actin filaments.
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24
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Self-organization of motor-propelled cytoskeletal filaments at topographically defined borders. J Biomed Biotechnol 2012; 2012:647265. [PMID: 22536023 PMCID: PMC3321463 DOI: 10.1155/2012/647265] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Accepted: 01/07/2012] [Indexed: 11/29/2022] Open
Abstract
Self-organization phenomena are of critical importance in living organisms and of great interest to exploit in nanotechnology. Here we describe in vitro self-organization of molecular motor-propelled actin filaments, manifested as a tendency of the filaments to accumulate in high density close to topographically defined edges on nano- and microstructured surfaces. We hypothesized that this “edge-tracing” effect either (1) results from increased motor density along the guiding edges or (2) is a direct consequence of the asymmetric constraints on stochastic changes in filament sliding direction imposed by the edges. The latter hypothesis is well captured by a model explicitly defining the constraints of motility on structured surfaces in combination with Monte-Carlo simulations [cf. Nitta et al. (2006)] of filament sliding. In support of hypothesis 2 we found that the model reproduced the edge tracing effect without the need to assume increased motor density at the edges. We then used model simulations to elucidate mechanistic details. The results are discussed in relation to nanotechnological applications and future experiments to test model predictions.
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25
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Idan O, Lam A, Kamcev J, Gonzales J, Agarwal A, Hess H. Nanoscale transport enables active self-assembly of millimeter-scale wires. NANO LETTERS 2012; 12:240-245. [PMID: 22111572 DOI: 10.1021/nl203450h] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Active self-assembly processes exploit an energy source to accelerate the movement of building blocks and intermediate structures and modify their interactions. A model system is the assembly of biotinylated microtubules partially coated with streptavidin into linear bundles as they glide on a surface coated with kinesin motor proteins. By tuning the assembly conditions, microtubule bundles with near millimeter length are created, demonstrating that active self-assembly is beneficial if components are too large for diffusive self-assembly but too small for robotic assembly.
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Affiliation(s)
- Ofer Idan
- Department of Biomedical Engineering, Columbia University, New York, New York, USA
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26
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Ramanathan M, Kilbey, II SM, Ji Q, Hill JP, Ariga K. Materials self-assembly and fabrication in confined spaces. ACTA ACUST UNITED AC 2012. [DOI: 10.1039/c2jm16629a] [Citation(s) in RCA: 71] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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27
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Affiliation(s)
- Henry Hess
- Department of Biomedical Engineering, Columbia University, New York, NY 10027;
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28
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Choi DS, Byun KE, Hong S. Dual transport systems based on hybrid nanostructures of microtubules and actin filaments. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2011; 7:1755-1760. [PMID: 21567942 DOI: 10.1002/smll.201002267] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2010] [Revised: 03/22/2011] [Indexed: 05/30/2023]
Affiliation(s)
- Dong Shin Choi
- Department of Nano Science and Engineering, Seoul National University, Seoul, 151-747, Korea
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29
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Albet-Torres N, Månsson A. Long-term storage of surface-adsorbed protein machines. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2011; 27:7108-12. [PMID: 21563803 PMCID: PMC3104519 DOI: 10.1021/la201081w] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
The effective and simple long-term storage of complex functional proteins is critical in achieving commercially viable biosensors. This issue is particularly challenging in recently proposed types of nanobiosensors, where molecular-motor-driven transportation substitutes microfluidics and forms the basis for novel detection schemes. Importantly, therefore, we here describe that delicate heavy meromyosin (HMM)-based nanodevices (HMM motor fragments adsorbed to silanized surfaces and actin bound to HMM) fully maintain their function when stored at -20 °C for more than a month. The mechanisms for the excellent preservation of acto-HMM motor function upon repeated freeze-thaw cycles are discussed. The results are important to the future commercial implementation of motor-based nanodevices and are of more general value to the long-term storage of any protein-based bionanodevice.
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Affiliation(s)
- Nuria Albet-Torres
- School of Natural Sciences, Linnaeus University, SE-39245 Kalmar, Sweden.
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30
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Fallesen TL, Macosko JC, Holzwarth G. Measuring the number and spacing of molecular motors propelling a gliding microtubule. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:011918. [PMID: 21405724 DOI: 10.1103/physreve.83.011918] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2010] [Indexed: 05/30/2023]
Abstract
The molecular motor gliding assay, in which a microtubule or other filament moves across a surface coated with motors, has provided much insight into how molecular motors work. The kinesin-microtubule system is also a strong candidate for the job of nanoparticle transporter in nanotechnology devices. In most cases, several motors transport each filament. Each motor serves both to bind the microtubule to a stationary surface and to propel the microtubule along the surface. By applying a uniform transverse force of 4-19 pN to a superparamagnetic bead attached to the trailing end of the microtubule, we have measured the distance d between binding points (motors). The average value of d was determined as a function of motor surface density σ. The measurements agree well with the scaling model of Duke, Holy, and Liebler, which predicts that (d)~σ(-2/5) if 0.05≤σ≤20 μm(-2) [Phys. Rev. Lett. 74, 330 (1995)]. The distribution of d fits an extension of the model. The radius of curvature of a microtubule bent at a binding point by the force of the magnetic bead was ≈1 μm, 5000-fold smaller than the radius of curvature of microtubules subjected only to thermal forces. This is evidence that at these points of high bending stress, generated by the force on the magnetic bead, the microtubule is in the more flexible state of a two-state model of microtubule bending proposed by Heussinger, Schüller, and Frey [Phys. Rev. E 81, 021904 (2010)].
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Affiliation(s)
- Todd L Fallesen
- Department of Physics, Wake Forest University, Winston-Salem, North Carolina 27109, USA
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31
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Young YN. Dynamics of a semiflexible polar filament in Stokes flow. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2010; 82:016309. [PMID: 20866727 DOI: 10.1103/physreve.82.016309] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2010] [Indexed: 05/29/2023]
Abstract
In this work, the dynamics and transport of a polarly driven filament is examined using a continuum slender-body model. Immersed in a viscous fluid, the filament gains polar propulsion from the motor proteins (anchored on the motility assay) while experiencing a viscous drag from the bottom wall. Results from the linear analysis on a straight polar filament illustrate the necessity of spatial inhomogeneity in the polar forcing for the buckling instability. The ensuing buckling leads to filament deformation, undulation, and change of its direction of motion in the numerical simulations. Repeated filament buckling in two types of motor protein concentration landscape results in diffusive transport of a polar filament on scales much larger than the mean-free path and the average duration between filament buckling events.
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Affiliation(s)
- Y-N Young
- Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, New Jersey 07102, USA
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32
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Korten T, Månsson A, Diez S. Towards the application of cytoskeletal motor proteins in molecular detection and diagnostic devices. Curr Opin Biotechnol 2010; 21:477-88. [PMID: 20860918 DOI: 10.1016/j.copbio.2010.05.001] [Citation(s) in RCA: 94] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2010] [Revised: 04/30/2010] [Accepted: 05/06/2010] [Indexed: 01/12/2023]
Abstract
Over the past ten years, great advancements have been made towards using biomolecular motors for nanotechnological applications. In particular, devices using cytoskeletal motor proteins for molecular transport are maturing. First efforts towards designing such devices used motor proteins attached to micro-structured substrates for the directed transport of microtubules and actin filaments. Soon thereafter, the specific capture, transport and detection of target analytes like viruses were demonstrated. Recently, spatial guiding of the gliding filaments was added to increase the sensitivity of detection and allow parallelization. Whereas molecular motor powered devices have not yet demonstrated performance beyond the level of existing detection techniques, the potential is great: Replacing microfluidics with transport powered by molecular motors allows integration of the energy source (ATP) into the assay solution. This opens up the opportunity to design highly integrated, miniaturized, autonomous detection devices. Such devices, in turn, may allow fast and cheap on-site diagnosis of diseases and detection of environmental pathogens and toxins.
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Affiliation(s)
- Till Korten
- Max-Planck-Institute for Molecular Cell Biology and Genetics, Dresden, Germany
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33
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Nitta T, Tanahashi A, Hirano M. In silico design and testing of guiding tracks for molecular shuttles powered by kinesin motors. LAB ON A CHIP 2010; 10:1447-1453. [PMID: 20480110 DOI: 10.1039/b926210e] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
We present an extended computer simulation method which allows in silico design and testing of guiding tracks for molecular shuttles powered by kinesin motors. The simulation reproduced molecular shuttle movements under external forces and dissociation of shuttles from guiding track surfaces. The simulation was validated by comparing the simulation results with the corresponding experimental ones. Using the simulation, track designers can change guiding track designs, choose guiding methods, tune the strength of external forces, and test the module performance. This simulation would significantly reduce the effort expended in designing guiding tracks for molecular shuttles powered by kinesin motors.
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Affiliation(s)
- Takahiro Nitta
- Department of Mathematical and Design Engineering, Gifu University, Gifu, 501-1193, Japan.
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34
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Katira P, Hess H. Two-stage capture employing active transport enables sensitive and fast biosensors. NANO LETTERS 2010; 10:567-72. [PMID: 20055432 PMCID: PMC2819759 DOI: 10.1021/nl903468p] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2009] [Revised: 12/28/2009] [Indexed: 05/20/2023]
Abstract
Nanoscale sensors enable the detection of analytes with improved signal-to-noise ratio but suffer from mass transport limitations. Molecular shuttles, assembled from, e.g., antibody-functionalized microtubules and kinesin motor proteins, can selectively capture analytes from solution and deliver the analytes to a sensor patch. This two-stage process can accelerate mass transport to nanoscale biosensors and facilitate the rapid detection of analytes. Here, the possible increase of the signal-to-noise ratio is calculated, and the optimal layout of a system which integrates active transport is determined.
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Affiliation(s)
- Parag Katira
- Department of Materials Science and Engineering, University of Florida, Gainesville, Florida 32611-6400
| | - Henry Hess
- Department of Materials Science and Engineering, University of Florida, Gainesville, Florida 32611-6400
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35
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Byun KE, Heo K, Shim S, Choi HJ, Hong S. Functionalization of silicon nanowires with actomyosin motor protein for bioinspired nanomechanical applications. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2009; 5:2659-2664. [PMID: 19771569 DOI: 10.1002/smll.200900964] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Affiliation(s)
- Kyung-Eun Byun
- Department of Physics and Astronomy, Seoul National University, Seoul, Korea
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36
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Vikhoreva NN, Vikhorev PG, Fedorova MA, Hoffmann R, Månsson A, Kuleva NV. The in vitro motility assay parameters of actin filaments from Mytilus edulis exposed in vivo to copper ions. Arch Biochem Biophys 2009; 491:32-8. [DOI: 10.1016/j.abb.2009.09.014] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2009] [Revised: 09/22/2009] [Accepted: 09/24/2009] [Indexed: 11/26/2022]
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37
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Bachand GD, Hess H, Ratna B, Satir P, Vogel V. "Smart dust" biosensors powered by biomolecular motors. LAB ON A CHIP 2009; 9:1661-1666. [PMID: 19495446 DOI: 10.1039/b821055a] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The concept of a microfabricated biosensor for environmental and biomedical monitoring applications which is composed of environmentally benign components is presented. With a built-in power source (the biological fuel ATP) and driven by biological motors (kinesin), sensing in the microdevice can be remotely activated and the presence of a target molecule or toxin remotely detected. The multifaceted progress towards the realization of such a device is described.
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Affiliation(s)
- George D Bachand
- Center for Integrated Nanotechnologies, Sandia National Laboratories, Albuquerque, NM 87185, USA
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38
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Fulga F, Nicolau DV, Nicolau DV. Models of protein linear molecular motors for dynamic nanodevices. Integr Biol (Camb) 2008; 1:150-69. [PMID: 20023800 DOI: 10.1039/b814985b] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Protein molecular motors are natural nano-machines that convert the chemical energy from the hydrolysis of adenosine triphosphate into mechanical work. These efficient machines are central to many biological processes, including cellular motion, muscle contraction and cell division. The remarkable energetic efficiency of the protein molecular motors coupled with their nano-scale has prompted an increasing number of studies focusing on their integration in hybrid micro- and nanodevices, in particular using linear molecular motors. The translation of these tentative devices into technologically and economically feasible ones requires an engineering, design-orientated approach based on a structured formalism, preferably mathematical. This contribution reviews the present state of the art in the modelling of protein linear molecular motors, as relevant to the future design-orientated development of hybrid dynamic nanodevices.
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Affiliation(s)
- Florin Fulga
- Department of Electrical Engineering & Electronics, University of Liverpool, Liverpool, UK
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39
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Abstract
Muscle contraction and other forms of cell motility occur as a result of cyclic interactions between myosin molecules and actin filaments. Force generation is generally attributed to ATP-driven structural changes in myosin, whereas a passive role is ascribed to actin. However, some results challenge this view, predicting structural changes in actin during motor activity, e.g., when the actin filaments slide on a myosin-coated surface in vitro. Here, we analyzed statistical properties of the sliding filament paths, allowing us to detect changes of this type. It is interesting to note that evidence for substantial structural changes that led to increased bending flexibility of the filaments was found in phalloidin-stabilized, but not in phalloidin-free, actin filaments. The results are in accordance with the idea that a high-flexibility structural state of actin is a prerequisite for force production, but not the idea that a low-to-high flexibility transition of the actin filament should be an important component of the force-generating step per se. Finally, our data challenge the general view that phalloidin-stabilized filaments behave as native actin filaments in their interaction with myosin. This has important implications, since phalloidin stabilization is a routine procedure in most studies of actomyosin function.
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