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Paraschiv A, Hegde S, Ganti R, Pilizota T, Šarić A. Dynamic Clustering Regulates Activity of Mechanosensitive Membrane Channels. PHYSICAL REVIEW LETTERS 2020; 124:048102. [PMID: 32058787 DOI: 10.1103/physrevlett.124.048102] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Indexed: 06/10/2023]
Abstract
Experiments have suggested that bacterial mechanosensitive channels separate into 2D clusters, the role of which is unclear. By developing a coarse-grained computer model we find that clustering promotes the channel closure, which is highly dependent on the channel concentration and membrane stress. This behaviour yields a tightly regulated gating system, whereby at high tensions channels gate individually, and at lower tensions the channels spontaneously aggregate and inactivate. We implement this positive feedback into the model for cell volume regulation, and find that the channel clustering protects the cell against excessive loss of cytoplasmic content.
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Affiliation(s)
- Alexandru Paraschiv
- Department of Physics and Astronomy, Institute for the Physics of Living Systems University College London, London WC1E 6BT, United Kingdom
- MRC Laboratory for Molecular Cell Biology, University College London, London WC1E 6BT, United Kingdom
| | - Smitha Hegde
- Centre for Synthetic and Systems Biology University of Edinburgh, Edinburgh EH9 3FF, United Kingdom
| | - Raman Ganti
- Institute for Medical Engineering and Science Massachusetts Institute of Technology, Cambridge, Massachusetts 02142, USA
| | - Teuta Pilizota
- Centre for Synthetic and Systems Biology University of Edinburgh, Edinburgh EH9 3FF, United Kingdom
| | - Anđela Šarić
- Department of Physics and Astronomy, Institute for the Physics of Living Systems University College London, London WC1E 6BT, United Kingdom
- MRC Laboratory for Molecular Cell Biology, University College London, London WC1E 6BT, United Kingdom
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Peng B, Ding XY, Sun C, Liu W, Zhang JZH, Zhao X. The effect of POPC acyl chains packing by aromatic amino acid methyl esters investigated by ATR-FTIR combined with QM calculations. RSC Adv 2016. [DOI: 10.1039/c6ra05903a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
The packing of POPC acyl chains can be influenced by aromatic amino acid methyl esters significantly, thus the HCCH motif is packed closed to the other one of an adjacent acyl chain with enhancement by dispersion interactions.
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Affiliation(s)
- Bo Peng
- Shanghai Key Laboratory of Magnetic Resonance
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
| | - Xiao-Yan Ding
- Shanghai Key Laboratory of Magnetic Resonance
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
| | - Chao Sun
- Shanghai Key Laboratory of Magnetic Resonance
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
| | - Wei Liu
- State Key Laboratory of Precision Spectroscopy
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
| | - John Z. H. Zhang
- State Key Laboratory of Precision Spectroscopy
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
| | - Xin Zhao
- Shanghai Key Laboratory of Magnetic Resonance
- Department of Physics
- School of Physics and Materials Science
- East China Normal University
- Shanghai 200062
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Dintenfass L. The Internal Viscosity of the Red Cell and the Structure of the Red Cell Membrane. Considerations of the Liquid Crystalline Structure of the Red Cell Interior and Membrane from Rheological Data. ACTA ACUST UNITED AC 2007. [DOI: 10.1080/15421406908084901] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Victor T, van der Merwe N, Benade AJ, La Cock C, Lochner A. Mitochondrial phospholipid composition and microviscosity in myocardial ischaemia. BIOCHIMICA ET BIOPHYSICA ACTA 1985; 834:215-23. [PMID: 3995062 DOI: 10.1016/0005-2760(85)90158-4] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Normothermic ischaemic arrest of the isolated perfused rat heart causes profound changes in mitochondrial ultrastructure. Since the mitochondrial membranes contain a high percentage of phospholipids, an evaluation of the effect of different periods of ischaemia on mitochondrial phospholipid content and fatty acid composition was made. The results showed that ischaemia had no effect on the content of the different phospholipid classes and no correlation was observed between ultrastructural changes and mitochondrial phospholipid content. However, the phospholipid fatty acid composition of several phospholipids showed marked changes. For example, with lysophosphatidylcholine a progressive increase in the percentage saturated fatty acids was observed with increasing periods of ischaemia, while a reduction occurred in lysophosphatidylethanolamine. To determine whether the ischaemia-induced changes in mitochondrial phospholipid fatty acid composition had an effect on the physical properties of the membrane, the microviscosity of mitochondrial preparations was studied, using the lipophilic probe, 1,6-diphenyl-1,3,5-hexatrine. Mitochondria isolated from ischaemic hearts showed a progressive increase in fluorescence polarization with longer periods of ischaemia, indicating an overall increase in microviscosity. This phenomenon may be responsible for the increased mitochondrial fragility which is characteristic of ischaemic damage.
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Fourcans B, Jain MK. Role of phospholipids in transport and enzymic reactions. ADVANCES IN LIPID RESEARCH 1974; 12:147-226. [PMID: 4370591 DOI: 10.1016/b978-0-12-024912-1.50011-9] [Citation(s) in RCA: 160] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Interaction Between Glycolipids and Wheat Flour Macromolecules in Breadmaking. ACTA ACUST UNITED AC 1973. [DOI: 10.1016/s0065-2628(08)60193-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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Abstract
This chapter discusses lipids in viruses. Lipid forms an integral part of many viruses and exists either in the form of a continuous envelope or in lipoprotein complexes that surround a nucleoprotein core or helix. In general, the envelope can be described as a molecular container for the genetic material of the virus. Viruses are obligate intracellular parasites and are not known to carry genetic coding for enzymes involved in lipid synthesis. Hence, they generally contain the same classes of lipid as are found in the host cell or their membrane of assembly. Lipids make up 20–35% by weight of most viruses; however, there are exceptions such as vaccinia virus, which has only 5% lipid despite having a complex multimembrane envelope structure. Naked herpesvirus capsids closely resemble non-lipid-containing viruses such as adenovirus or polyoma virus, which are also assembled in the nucleus but show full infectivity without any envelope. Both naked and enveloped herpesvirus particles are found in infected cells; however, only enveloped particles are found in extracellular fluids.
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Birken EA, Brookler KH. Surface tension lowering substance of the canine Eustachian tube. Ann Otol Rhinol Laryngol 1972; 81:268-71. [PMID: 5067550 DOI: 10.1177/000348947208100215] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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Rambourg A. Morphological and histochemical aspects of glycoproteins at the surface of animal cells. INTERNATIONAL REVIEW OF CYTOLOGY 1971; 31:57-114. [PMID: 4110370 DOI: 10.1016/s0074-7696(08)60057-1] [Citation(s) in RCA: 237] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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Hearing VJ, Eppig JJ. Electron microscopy of the normal and I-131 treated thyroid gland of the newt, Notophthalmus viridescens. J Morphol 1969; 128:369-85. [PMID: 5798187 DOI: 10.1002/jmor.1051280306] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Good W, Rose SM. The kinetics of haemolysis of human erythrocytes in hypotonic solutions of glucose. BIOCHIMICA ET BIOPHYSICA ACTA 1968; 163:483-93. [PMID: 5727390 DOI: 10.1016/0005-2736(68)90077-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Cohen P. Relationship between membrane function and permeability. II. The interrelationship of copper attachment, glycerol transport and thromboplastin availability in the intact human erythrocyte. Br J Haematol 1968; 15:245-58. [PMID: 5681481 DOI: 10.1111/j.1365-2141.1968.tb01536.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Coldman MF, Good W. The kinetics of malonamide-induced haemolysis of mammalian erythrocytes. I. The Arrhenius activation parameters. BIOCHIMICA ET BIOPHYSICA ACTA 1968; 150:194-205. [PMID: 5641889 DOI: 10.1016/0005-2736(68)90163-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Cohen P. Relationship between membrane function and permeability. 3. Further evidence linking membrane transport and thromboplastin availability of the intact erythrocyte. Br J Haematol 1968; 14:141-52. [PMID: 5635600 DOI: 10.1111/j.1365-2141.1968.tb01483.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Cohen P. Relationship between membrane function and permeability. I. Similarity of 'platelet factor-3' availability in pure erythrocyte and pure platelet suspensions. Br J Haematol 1967; 13:739-45. [PMID: 6050866 DOI: 10.1111/j.1365-2141.1967.tb08839.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Lauterbach F. [The effect of cardiotonic steroids on the intestinal absorption of actively transported and diffusing substances and on their relationship to Na+ concentration and Na+ transport]. BIOCHIMICA ET BIOPHYSICA ACTA 1967; 135:273-85. [PMID: 6068334 DOI: 10.1016/0005-2736(67)90121-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Mendenhall RM, Sun CN, Mendenhall AL. Lung alveolar surfactant and the Thomson-Marangoni effects. RESPIRATION PHYSIOLOGY 1967; 2:360-74. [PMID: 6033081 DOI: 10.1016/0034-5687(67)90041-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Die normale Anatomie der menschlichen Placenta. Placenta 1967. [DOI: 10.1007/978-3-662-25615-2_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Chapter 22. Molecular Aspects of Drug-Receptor Interactions. ANNUAL REPORTS IN MEDICINAL CHEMISTRY 1967. [DOI: 10.1016/s0065-7743(08)61520-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
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Strauss F. Die normale Anatomie der menschlichen Placenta. Placenta 1967. [DOI: 10.1007/978-3-662-38455-8_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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The intracellular distribution of sterols in Eurycotis floridana and its possible relation to subcellular membrane structures. J Lipid Res 1966. [DOI: 10.1016/s0022-2275(20)38969-0] [Citation(s) in RCA: 31] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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Grundfest H. Comparative electrobiology of excitable membranes. ADVANCES IN COMPARATIVE PHYSIOLOGY AND BIOCHEMISTRY 1966; 2:1-116. [PMID: 5330181 DOI: 10.1016/b978-0-12-395511-1.50006-8] [Citation(s) in RCA: 46] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Maddy AH. The chemical organization of the plasma membrane of animal cells. INTERNATIONAL REVIEW OF CYTOLOGY 1966; 20:1-65. [PMID: 5337299 DOI: 10.1016/s0074-7696(08)60796-2] [Citation(s) in RCA: 48] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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van den Bosch H, van Deenen LL. Chemical structure and biochemical significance of lysolecithins from rat liver. BIOCHIMICA ET BIOPHYSICA ACTA 1965; 106:326-37. [PMID: 5867693 DOI: 10.1016/0005-2760(65)90041-x] [Citation(s) in RCA: 103] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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van Iterson W. Symposium on the fine structure and replication of bacteria and their parts. II. Bacterial cytoplasm. BACTERIOLOGICAL REVIEWS 1965; 29:299-325. [PMID: 5318115 PMCID: PMC441280 DOI: 10.1128/br.29.3.299-325.1965] [Citation(s) in RCA: 57] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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WOLFE LS. CELL MEMBRANE CONSTITUENTS CONCERNED WITH TRANSPORT MECHANISMS. CANADIAN JOURNAL OF BIOCHEMISTRY 1964; 42:971-88. [PMID: 14196182 DOI: 10.1139/o64-108] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The biological membrane is a multiphasic, polyionic, regionally differentiated structure, the constituents of which are closely linked to the physiological and metabolic processes of the entire cell. Knowledge of the types of molecules, their orientation, and the relative importance of them for transport processes is still very fragmentary. The information at present available on the composition of the protoplast membrane, the red cell membrane, and the neuronal membrane is brought together and discussed in terms of the possible role in transport processes. A labile phosphate attached to protein or specific phosphatides or shared between them as a lipo-phosphoprotein complex is suggested as the intermediate in the active transport of sodium. The rapid phosphorylation of these constituents by ATP through the activity of membrane ATPase and their subsequent dephosphorylation could lead to rhythmic transitions in the configuration of membrane proteins and control active cation transport.
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