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Morozov-Leonov SY. Hybrid Form Pelophylax esculentus-ridibundus (Amphibia, Ranidae) from the Tisa River Drainage: Its Origin and Evolutionary Potential. CYTOL GENET+ 2021. [DOI: 10.3103/s0095452721060098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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2
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Liu L, Wang Z, Huang L, Wang T, Su Y. Chloroplast population genetics reveals low levels of genetic variation and conformation to the central-marginal hypothesis in Taxus wallichiana var. mairei, an endangered conifer endemic to China. Ecol Evol 2019; 9:11944-11956. [PMID: 31695899 PMCID: PMC6822043 DOI: 10.1002/ece3.5703] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 09/07/2019] [Accepted: 09/11/2019] [Indexed: 11/12/2022] Open
Abstract
The central-marginal hypothesis predicts that geographically peripheral populations should exhibit reduced genetic diversity and increased genetic differentiation than central populations due to smaller effective population size and stronger geographical isolation. We evaluated these predictions in the endangered conifer Taxus wallichiana var. mairei. Eight plastid simple sequence repeats (cpSSRs) were used to investigate plastid genetic variation in 22 populations of Taxus wallichiana var. mairei, encompassing nearly its entire distribution range. Low levels of plastid genetic variation and differentiation were detected in the populations, and the findings were attributed to low mutation rates, small population sizes, habitat fragmentation and isolation, and effective pollen or seed dispersal. Hunan and Hubei were identified as major refugia based on the number of private haplotypes and species distribution modeling. Trends in plastid genetic diversity and genetic differentiation from central to peripheral populations supported the predictions of the central-marginal hypothesis. In scenarios wherein the future climate becomes warmer, we predict that some peripheral populations will disappear and southern and southeastern regions will become significantly less habitable. Factors that include the levels of precipitation during the driest month, annual precipitation level, and annual temperature range will be decisive in shaping the future distribution of these populations. This study provides a theoretical basis for the conservation of T. wallichiana var. mairei.
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Affiliation(s)
- Li Liu
- School of Life SciencesSun Yat‐sen UniversityGuangzhouChina
| | - Zhen Wang
- College of Life SciencesNanjing Agricultural UniversityNanjingChina
| | - Lijie Huang
- School of Life SciencesSun Yat‐sen UniversityGuangzhouChina
| | - Ting Wang
- College of Life SciencesSouth China Agricultural UniversityGuangzhouChina
| | - Yingjuan Su
- School of Life SciencesSun Yat‐sen UniversityGuangzhouChina
- Research Institute of Sun Yat‐sen UniversityShenzhenChina
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Jenkins DA, Yannic G, Schaefer JA, Conolly J, Lecomte N. Population structure of caribou in an ice-bound archipelago. DIVERS DISTRIB 2018. [DOI: 10.1111/ddi.12748] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Affiliation(s)
- Deborah. A. Jenkins
- Environmental and Life Sciences Graduate Program; Trent University; Peterborough ON Canada
- Canada Research Chair in Polar and Boreal Ecology and Centre d'Études Nordiques; University of Moncton; Moncton NB Canada
| | - Glenn Yannic
- University of Grenoble Alpes; University of Savoie Mont Blanc; CNRS; LECA (Laboratoire d'Ecologie Alpine); Le Bourget-du-Lac France
| | | | - James Conolly
- Department of Anthropology; Trent University; Peterborough ON Canada
| | - Nicolas Lecomte
- Canada Research Chair in Polar and Boreal Ecology and Centre d'Études Nordiques; University of Moncton; Moncton NB Canada
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Morozov-Leonov SY. Hemiclone diversity in the hybrid form Pelophylax esculentus-ridibundus (Amphibia, Ranidae) from the Tisa river drainage. CYTOL GENET+ 2017. [DOI: 10.3103/s0095452717060093] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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5
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Sagot M, Phillips CD, Baker RJ, Stevens RD. Human-modified habitats change patterns of population genetic structure and group relatedness in Peter's tent-roosting bats. Ecol Evol 2016; 6:6050-63. [PMID: 27648225 PMCID: PMC5016631 DOI: 10.1002/ece3.2255] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2016] [Revised: 05/19/2016] [Accepted: 05/23/2016] [Indexed: 11/23/2022] Open
Abstract
Although coloniality is widespread among mammals, it is still not clear what factors influence composition of social groups. As animals need to adapt to multiple habitat and environmental conditions throughout their range, variation in group composition should be influenced by adaptive adjustment to different ecological factors. Relevant to anthropogenic disturbance, increased habitat modification by humans can alter species' presence, density, and population structure. Therefore, it is important to understand the consequences of changes to landscape composition, in particular how habitat modification affects social structure of group-forming organisms. Here, we combine information on roosting associations with genetic structure of Peter's tent-roosting bats, Uroderma bilobatum to address how different habitat characteristics at different scales affect structure of social groups. By dividing analyses by age and sex, we determined that genetic structure was greater for adult females than adult males or offspring. Habitat variables explained 80% of the variation in group relatedness (mainly influenced by female relatedness) with roost characteristics contributing the most explained variation. This suggests that females using roosts of specific characteristics exhibit higher relatedness and seem to be philopatric. These females mate with more males than do more labile female groups. Results describe ecological and microevolutionary processes, which affect relatedness and social structure; findings are highly relevant to species distributions in both natural and human-modified environments.
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Affiliation(s)
- Maria Sagot
- Department of Biological SciencesState University of New York at OswegoOswegoNew York13126
| | - Caleb D. Phillips
- Department of Biological SciencesTexas Tech UniversityLubbockTexas79409
| | - Robert J. Baker
- Department of Biological SciencesTexas Tech UniversityLubbockTexas79409
| | - Richard D. Stevens
- Department of Natural Resources ManagementTexas Tech UniversityLubbockTexas79409
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Griebel J, Gießler S, Yin M, Wolinska J. Parental and hybrid Daphnia
from the D. longispina
complex: long-term dynamics in genetic structure and significance of overwintering modes. J Evol Biol 2016; 29:810-23. [DOI: 10.1111/jeb.12828] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Revised: 12/18/2015] [Accepted: 01/10/2016] [Indexed: 12/22/2022]
Affiliation(s)
- J. Griebel
- Department of Ecosystem Research; Leibniz-Institute of Freshwater Ecology and Inland Fisheries; Berlin Germany
- Department of Biology II; Ludwig Maximilian University Munich; Munich Germany
| | - S. Gießler
- Department of Biology II; Ludwig Maximilian University Munich; Munich Germany
| | - M. Yin
- MOE Key Laboratory of Biodiversity Science and Ecological Engineering; School of Life Science; Fudan University; Shanghai China
| | - J. Wolinska
- Department of Ecosystem Research; Leibniz-Institute of Freshwater Ecology and Inland Fisheries; Berlin Germany
- Department of Biology, Chemistry and Pharmacy; Institute of Biology; Freie Universität Berlin; Berlin Germany
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Hoffmann A, Plötner J, Pruvost NBM, Christiansen DG, Röthlisberger S, Choleva L, Mikulíček P, Cogălniceanu D, Sas-Kovács I, Shabanov D, Morozov-Leonov S, Reyer HU. Genetic diversity and distribution patterns of diploid and polyploid hybrid water frog populations (Pelophylax esculentus complex) across Europe. Mol Ecol 2015; 24:4371-91. [PMID: 26308154 DOI: 10.1111/mec.13325] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2014] [Revised: 07/09/2015] [Accepted: 07/10/2015] [Indexed: 11/29/2022]
Abstract
Polyploidization is a rare yet sometimes successful way for animals to rapidly create geno- and phenotypes that may colonize new habitats and quickly adapt to environmental changes. In this study, we use water frogs of the Pelophylax esculentus complex, comprising two species (Pelophylax lessonae, genotype LL; Pelophylax ridibundus, RR) and various diploid (LR) and triploid (LLR, LRR) hybrid forms, summarized as P. esculentus, as a model for studying recent hybridization and polyploidization in the context of speciation. Specifically, we compared the geographic distribution and genetic diversity of diploid and triploid hybrids across Europe to understand their origin, maintenance and potential role in hybrid speciation. We found that different hybrid and parental genotypes are not evenly distributed across Europe. Rather, their genetic diversity is structured by latitude and longitude and the presence/absence of parental species but not of triploids. Highest genetic diversity was observed in central and eastern Europe, the lowest in the northwestern parts of Europe. This gradient can be explained by the decrease in genetic diversity during postglacial expansion from southeastern glacial refuge areas. Genealogical relationships calculated on the basis of microsatellite data clearly indicate that hybrids are of multiple origin and include a huge variety of parental genomes. Water frogs in mixed-ploidy populations without any parental species (i.e. all-hybrid populations) can be viewed as evolutionary units that may be on their way towards hybrid speciation. Maintenance of such all-hybrid populations requires a continuous exchange of genomes between diploids and triploids, but scenarios for alternative evolutionary trajectories are discussed.
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Affiliation(s)
- Alexandra Hoffmann
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich, CH-8057, Switzerland
| | - Jörg Plötner
- Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstraße 43, Berlin, 10115, Germany
| | - Nicolas B M Pruvost
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich, CH-8057, Switzerland
| | - Ditte G Christiansen
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich, CH-8057, Switzerland
| | - Sandra Röthlisberger
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich, CH-8057, Switzerland
| | - Lukáš Choleva
- Laboratory of Fish Genetics, Institute of Animal Physiology and Genetics, AS CR, v.v.i., Rumburská 89, Liběchov, 277 21, Czech Republic.,Department of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, Ostrava, 710 00, Czech Republic
| | - Peter Mikulíček
- Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynska dolina B-1, Bratislava, SK-84215, Slovak Republic
| | - Dan Cogălniceanu
- Faculty of Natural Sciences and Agricultural Sciences, University Ovidius Constanţa, Al. Universităţii 1, corp B, Constanţa, Romania
| | - István Sas-Kovács
- Department of Biology, Faculty of Sciences, University of Oradea, Universitatii str. 1, Oradea, 410087, Romania
| | - Dmitry Shabanov
- Karazin Kharkiv National University, Svobody sq 4, Kharkiv, 62077, Ukraine
| | - Svyatoslav Morozov-Leonov
- Department of Evolutionary Genetic Basics of Systematics, Schmalhausen Institute of Zoology, B. Khmelnitskogo st., 15 Kyiv-30, Kyiv, MSP UA-01601, Ukraine
| | - Heinz-Ulrich Reyer
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, Zurich, CH-8057, Switzerland
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Radojičić JM, Krizmanić I, Kasapidis P, Zouros E. Extensive mitochondrial heteroplasmy in hybrid water frog (Pelophylax spp.) populations from Southeast Europe. Ecol Evol 2015; 5:4529-41. [PMID: 26668720 PMCID: PMC4670067 DOI: 10.1002/ece3.1692] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2015] [Revised: 08/05/2015] [Accepted: 08/12/2015] [Indexed: 11/30/2022] Open
Abstract
Water frogs of the genus Pelophylax (previous Rana) species have been much studied in Europe for their outstanding reproductive mechanism in which sympatric hybridization between genetically distinct parental species produces diverse genetic forms of viable hybrid animals. The most common hybrid is P. esculentus that carries the genomes of both parental species, P. ridibundus and P. lessonae, but usually transfers the whole genome of only one parent to its offsprings (hybridogenesis). The evolutionary cost of transfer of the intact genome and hence the hemiclonal reproduction is the depletion of heterozygosity in the hybrid populations. Pelophylax esculentus presents an excellent example of the long‐term sustained hybridization and hemiclonal reproduction in which the effects of the low genetic diversity are balanced through the novel mutations and periodic recombinations. In this study, we analyzed the mitochondrial (mt) and microsatellites DNA variations in hybrid Pelophylax populations from southern parts of the Pannonian Basin and a north–south transect of the Balkan Peninsula, which are home for a variety of Pelophylax genetic lineages. The mtDNA haplotypes found in this study corresponded to P. ridibundus and P. epeiroticus of the Balkan – Anatolian lineage (ridibundus–bedriagae) and to P. lessonae and a divergent lessonae haplotype of the lessonae lineage. The mtDNA genomes showed considerable intraspecific variation and geographic differentiation. The Balkan wide distributed P. ridibundus was found in all studied populations and its nuclear genome, along with either the lessonae or the endemic epeiroticus genome, in all hybrids. An unexpected finding was that the hybrid populations were invariably heteroplasmic, that is, they contained the mtDNA of both parental species. We discussed the possibility that such extensive heteroplasmy is a result of hybridization and it comes from regular leakage of the paternal mtDNA from a sperm of one species that fertilizes eggs of another. In this case, the mechanisms that protect the egg from heterospecific fertilization and further from the presence of sperm mtDNA could become compromised due to their differences and divergence at both, mitochondrial and nuclear DNA. The heteroplasmy once retained in the fertilized egg could be transmitted by hybrid backcrossing to the progeny and maintained in a population over generations. The role of interspecies and heteroplasmic hybrid animals due to their genomic diversity and better fitness compare to the parental species might be of the special importance in adaptations to miscellaneous and isolated environments at the Balkan Peninsula.
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Affiliation(s)
- Jelena M Radojičić
- Hellenic Centre for Marine Research Institute of Marine Biology, Biotechnology and Aquaculture Heraklion Greece ; Department of Biology University of Crete Heraklion Greece
| | - Imre Krizmanić
- Faculty of Biology Institute of Zoology University of Belgrade Belgrade Serbia
| | - Panagiotis Kasapidis
- Hellenic Centre for Marine Research Institute of Marine Biology, Biotechnology and Aquaculture Heraklion Greece
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Bove P, Milazzo P, Barbuti R. The role of deleterious mutations in the stability of hybridogenetic water frog complexes. BMC Evol Biol 2014; 14:107. [PMID: 24885008 PMCID: PMC4037432 DOI: 10.1186/1471-2148-14-107] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Accepted: 05/09/2014] [Indexed: 11/11/2022] Open
Abstract
Background Some species of water frogs originated from hybridization between different species. Such hybrid populations have a particular reproduction system called hybridogenesis. In this paper we consider the two species Pelophylax ridibundus and Pelophylax lessonae, and their hybrids Pelophylax esculentus. P. lessonae and P. esculentus form stable complexes (L-E complexes) in which P. esculentus are hemiclonal. In L-E complexes all the transmitted genomes by P. esculentus carry deleterious mutations which are lethal in homozygosity. Results We analyze, by means of an individual based computational model, L-E complexes. The results of simulations based on the model show that, by eliminating deleterious mutations, L-E complexes collapse. In addition, simulations show that particular female preferences can contribute to the diffusion of deleterious mutations among all P. esculentus frogs. Finally, simulations show how L-E complexes react to the introduction of translocated P. ridibundus. Conclusions The conclusions are the following: (i) deleterious mutations (combined with sexual preferences) strongly contribute to the stability of L-E complexes; (ii) female sexual choice can contribute to the diffusion of deleterious mutations; and (iii) the introduction of P. ridibundus can destabilize L-E complexes.
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Affiliation(s)
| | | | - Roberto Barbuti
- Dipartimento di Informatica, Università di Pisa, Largo B, Pontecorvo, 3, 56127 Pisa, Italy.
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10
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Hoffmann A, Reyer HU. Genomic effects on advertisement call structure in diploid and triploid hybrid waterfrogs (Anura, Pelophylax esculentus). BMC Ecol 2013; 13:47. [PMID: 24304922 PMCID: PMC4235041 DOI: 10.1186/1472-6785-13-47] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2013] [Accepted: 11/23/2013] [Indexed: 11/20/2022] Open
Abstract
BACKGROUND In anurans, differences in male mating calls have intensively been studied with respect to taxonomic classification, phylogeographic comparisons among different populations and sexual selection. Although overall successful, there is often much unexplained variation in these studies. Potential causes for such variation include differences among genotypes and breeding systems, as well as differences between populations. We investigated how these three factors affect call properties in male water frogs of Pelophylax lessonae (genotype LL), P. ridibundus (RR) and their interspecific hybrid P. esculentus which comes in diploid (LR) and triploid types (LLR, LRR). RESULTS We investigated five call parameters that all showed a genomic dosage effect, i.e. they either decreased or increased with the L/R ratio in the order LL-LLR-LR-LRR-RR. Not all parameters differentiated equally well between the five genotypes, but combined they provided a good separation. Two of the five call parameters were also affected by the breeding system. Calls of diploid LR males varied, depending on whether these males mated with one or both of the parental species (diploid systems) or triploid hybrids (mixed ploidy systems). With the exception of the northernmost mixed-ploidy population, call differences were not related to the geographic location of the population and they were not correlated with genetic distances in the R and L genomes. CONCLUSIONS We found an influence of all three tested factors on call parameters, with the effect size decreasing from genotype through breeding system to geographic location of the population. Overall, results were in line with predictions from a dosage effect in L/R ratios, but in three call parameters all three hybrid types were more similar to one or the other parental species. Also calls of diploid hybrids varied between breeding systems in agreement with the sexual host required for successful reproduction. The lack of hybrid call differences in a mixed-ploidy population at the northern edge of the water frog distribution is likely to be associated with genetic particularities, including a) low genetic variability and/or b) a local loss of genes coding for genotype-dependent call differentiation under conditions where female discrimination between diploid and triploid males is not beneficial.
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Affiliation(s)
- Alexandra Hoffmann
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
| | - Heinz-Ulrich Reyer
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
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Pruvost NBM, Hoffmann A, Reyer HU. Gamete production patterns, ploidy, and population genetics reveal evolutionary significant units in hybrid water frogs (Pelophylax esculentus). Ecol Evol 2013; 3:2933-46. [PMID: 24101984 PMCID: PMC3790541 DOI: 10.1002/ece3.687] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Revised: 06/14/2013] [Accepted: 06/17/2013] [Indexed: 12/05/2022] Open
Abstract
The European water frog Pelophylax esculentus is a natural hybrid between P. lessonae (genotype LL) and P. ridibundus (RR). It reproduces through hybridogenesis, eliminating one parental genome from its germline and producing gametes containing the genome of the other parental species. According to previous studies, this elimination and transmission pattern is very diverse. In mixed populations, where only diploid hybrids (LR) live in sympatry and mate with one or both parental species, the excluded genome varies among regions, and the remaining genome is transmitted clonally to haploid gametes. In all-hybrid populations consisting of diploid (LR) and triploid (LLR and/or LRR) frogs, diploid individuals also produce gametes clonally (1n in males, 2n in females), whereas triploids eliminate the genome they have in single copy and produce haploid gametes containing the recombined other genome. However, here, too, regional differences seem to exist, and some triploids have been reported to produce diploid gametes. In order to systematically study such regional and genotype differences in gamete production, their potential origin, and their consequences for the breeding system, we sampled frogs from five populations in three European countries, performed crossing experiments, and investigated the genetic variation through microsatellite analysis. For four populations, one in Poland, two in Germany, and one in Slovakia, our results confirmed the elimination and transmission pattern described above. In one Slovakian population, however, we found a totally different pattern. Here, triploid males (LLR) produce sperm with a clonally transmitted diploid LL genome, rather than a haploid recombined L genome, and LR females clonally produce haploid R eggs, rather than diploid LR eggs. These differences among the populations in gamete production go along with differences in genomotype composition, breeding system (i.e., the way triploids are produced), and genetic variation. These differences are strong evidence for a polyphyletic origin of triploids. Moreover, our findings shed light on the evolutionary potential inherent to the P. esculentus complex, where rare events due to untypical gametogenetic processes can lead to the raise, the perpetuation, and the dispersion of new evolutionary significant lineages which may also deserve special conservation measures.
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Affiliation(s)
- Nicolas B M Pruvost
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich Winterthurerstrasse 190, 8057, Zurich, Switzerland
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Hermaniuk A, Pruvost NBM, Kierzkowski P, Ogielska M. Genetic and Cytogenetic Characteristics of Pentaploidy in Water Frogs. HERPETOLOGICA 2013. [DOI: 10.1655/herpetologica-d-12-00037] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Pruvost NBM, Hollinger D, Reyer H. Genotype‐temperature interactions on larval performance shape population structure in hybridogenetic water frogs (Pelophylax esculentuscomplex). Funct Ecol 2013. [DOI: 10.1111/1365-2435.12049] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Nicolas B. M. Pruvost
- Institute of Evolutionary Biology and Environmental Studies University of Zurich Zurich Switzerland
| | - Daniel Hollinger
- Institute of Evolutionary Biology and Environmental Studies University of Zurich Zurich Switzerland
| | - Heinz‐Ulrich Reyer
- Institute of Evolutionary Biology and Environmental Studies University of Zurich Zurich Switzerland
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Collares-Pereira M, Matos I, Morgado-Santos M, Coelho M. Natural Pathways towards Polyploidy in Animals: TheSqualius alburnoidesFish Complex as a Model System to Study Genome Size and Genome Reorganization in Polyploids. Cytogenet Genome Res 2013; 140:97-116. [DOI: 10.1159/000351729] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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16
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Hauswaldt JS, Höer M, Ogielska M, Christiansen DG, Dziewulska-Szwajkowska D, Czernicka E, Vences M. A simplified molecular method for distinguishing among species and ploidy levels in European water frogs (Pelophylax). Mol Ecol Resour 2012; 12:797-805. [PMID: 22716763 DOI: 10.1111/j.1755-0998.2012.03160.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
Western Palearctic water frogs in the genus Pelophylax are a set of morphologically similar anuran species that form hybridogenetic complexes. Fully reliable identification of species and especially of hybrid ploidy depends on karyological and molecular methods. In central Europe, native water frog populations consist of the Pelophylax esculentus complex, that is, P. lessonae (LL), P. ridibundus (RR) and the hybrid form P. esculentus that can have different karyotypes (RL, LLR and RRL). We developed existing molecular methods further and propose a simple PCR method based on size-differences in the length of the serum albumin intron-1 and the RanaCR1, a non-LTR retrotransposon of the chicken repeat (CR) family. This PCR yields taxon-specific banding patterns that can easily be screened by standard agarose gel electrophoresis and correctly identify species in all of the 160 samples that had been identified to karyotype with other methods. To distinguish ploidy levels in LR, LLR and RRL specimens, we used the ratio of the peak heights of the larger (ridibundus specific) to the smaller (lessonae specific) bands of fluorescently labelled PCR products resolved on a capillary DNA sequencer and obtained a correct assignment of the karyotype in 93% of cases. Our new method will cut down time and expenses drastically for a reliable identification of water frogs of the P. esculentus complex and potentially for identification of other hybridogenetic complexes and/or taxa, and it even serves as a good indicator of the ploidy status of hybrid individuals.
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Affiliation(s)
- J Susanne Hauswaldt
- Zoological Institute, Technical University Braunschweig, Mendelssohnstr. 4, 38106 Braunschweig, Germany.
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17
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Genetic structure of the marsh frog (Pelophylax ridibundus) populations in urban landscape. EUR J WILDLIFE RES 2012. [DOI: 10.1007/s10344-012-0631-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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FOITZIK S, RÜGER MH, KURECK IM, METZLER D. Macro- and microgeographic genetic structure in an ant species with alternative reproductive tactics in sexuals. J Evol Biol 2011; 24:2721-30. [DOI: 10.1111/j.1420-9101.2011.02397.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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