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Kuhlisch C, Shemi A, Barak-Gavish N, Schatz D, Vardi A. Algal blooms in the ocean: hot spots for chemically mediated microbial interactions. Nat Rev Microbiol 2024; 22:138-154. [PMID: 37833328 DOI: 10.1038/s41579-023-00975-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/14/2023] [Indexed: 10/15/2023]
Abstract
The cycling of major nutrients in the ocean is affected by large-scale phytoplankton blooms, which are hot spots of microbial life. Diverse microbial interactions regulate bloom dynamics. At the single-cell level, interactions between microorganisms are mediated by small molecules in the chemical crosstalk that determines the type of interaction, ranging from mutualism to pathogenicity. Algae interact with viruses, bacteria, parasites, grazers and other algae to modulate algal cell fate, and these interactions are dependent on the environmental context. Recent advances in mass spectrometry and single-cell technologies have led to the discovery of a growing number of infochemicals - metabolites that convey information - revealing the ability of algal cells to govern biotic interactions in the ocean. The diversity of infochemicals seems to account for the specificity in cellular response during microbial communication. Given the immense impact of algal blooms on biogeochemical cycles and climate regulation, a major challenge is to elucidate how microscale interactions control the fate of carbon and the recycling of major elements in the ocean. In this Review, we discuss microbial interactions and the role of infochemicals in algal blooms. We further explore factors that can impact microbial interactions and the available tools to decipher them in the natural environment.
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Affiliation(s)
- Constanze Kuhlisch
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Adva Shemi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Noa Barak-Gavish
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
- Institute of Microbiology, ETH Zurich, Zurich, Switzerland
| | - Daniella Schatz
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
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2
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Liu X, Ma Y, Wu J, Wang P, Wang Y, Wang A, Yin Q, Ma H, Chan LL, Wu B. Characterizing the Influence of a Heterotrophic Bicosoecid Flagellate Pseudobodo sp. on the Dinoflagellate Gambierdiscus balechii. Toxins (Basel) 2023; 15:657. [PMID: 37999520 PMCID: PMC10674679 DOI: 10.3390/toxins15110657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/07/2023] [Accepted: 11/10/2023] [Indexed: 11/25/2023] Open
Abstract
Microbial interactions including competition, mutualism, commensalism, parasitism, and predation, which can be triggered by nutrient acquisition and chemical communication, are universal phenomena in the marine ecosystem. The interactions may influence the microbial population density, metabolism, and even their environmental functions. Herein, we investigated the interaction between a heterotrophic bicosoecid flagellate, Pseudobodo sp. (Bicoecea), and a dinoflagellate, Gambierdiscus balechii (Dinophyceae), which is a well-known ciguatera food poisoning (CFP) culprit. The presence of Pseudobodo sp. inhibited the algal proliferation and decreased the cardiotoxicity of zebrafish in the algal extract exposure experiment. Moreover, a significant difference in microbiome abundance was observed in algal cultures with and without Pseudobodo sp. Chemical analysis targeting toxins was performed by using liquid chromatography-tandem mass spectrometry (LC-MS/MS) combined with molecular networking (MN), showing a significant alteration in the cellular production of gambierone analogs and some super-carbon chain compounds. Taken together, our results demonstrated the impact of heterotrophic flagellate on the photosynthetic dinoflagellates, revealing the complex dynamics of algal toxin production and the ecological relationships related to dinoflagellates in the marine environment.
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Affiliation(s)
- Xiaowan Liu
- State Key Laboratory of Marine Pollution, Department of Biomedical Sciences, City University of Hong Kong, Hong Kong SAR 999077, China; (X.L.); (J.W.); (H.M.)
| | - Yihan Ma
- Ocean College, Zhejiang University, Zhoushan 321000, China; (Y.M.); (Y.W.); (A.W.); (Q.Y.)
| | - Jiajun Wu
- State Key Laboratory of Marine Pollution, Department of Biomedical Sciences, City University of Hong Kong, Hong Kong SAR 999077, China; (X.L.); (J.W.); (H.M.)
- Shenzhen Key Laboratory for the Sustainable Use of Marine Biodiversity, Research Centre for the Oceans and Human Health, City University of Hong Kong Shenzhen Research Institute, Shenzhen 518057, China
| | - Pengbin Wang
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou 310012, China;
- The Fourth Institute of Oceanography, Ministry of Natural Resources, Beihai 536000, China
| | - Yinuo Wang
- Ocean College, Zhejiang University, Zhoushan 321000, China; (Y.M.); (Y.W.); (A.W.); (Q.Y.)
| | - Anli Wang
- Ocean College, Zhejiang University, Zhoushan 321000, China; (Y.M.); (Y.W.); (A.W.); (Q.Y.)
| | - Qizhao Yin
- Ocean College, Zhejiang University, Zhoushan 321000, China; (Y.M.); (Y.W.); (A.W.); (Q.Y.)
| | - Haiying Ma
- State Key Laboratory of Marine Pollution, Department of Biomedical Sciences, City University of Hong Kong, Hong Kong SAR 999077, China; (X.L.); (J.W.); (H.M.)
| | - Leo Lai Chan
- State Key Laboratory of Marine Pollution, Department of Biomedical Sciences, City University of Hong Kong, Hong Kong SAR 999077, China; (X.L.); (J.W.); (H.M.)
- Shenzhen Key Laboratory for the Sustainable Use of Marine Biodiversity, Research Centre for the Oceans and Human Health, City University of Hong Kong Shenzhen Research Institute, Shenzhen 518057, China
| | - Bin Wu
- Ocean College, Zhejiang University, Zhoushan 321000, China; (Y.M.); (Y.W.); (A.W.); (Q.Y.)
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3
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Shemi A, Ben-Dor S, Rotkopf R, Dym O, Vardi A. Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean. ISME COMMUNICATIONS 2023; 3:72. [PMID: 37452148 PMCID: PMC10349084 DOI: 10.1038/s43705-023-00280-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 05/27/2023] [Accepted: 06/29/2023] [Indexed: 07/18/2023]
Abstract
Phytoplankton produce the volatile dimethyl sulfide (DMS), an important infochemical mediating microbial interactions, which is also emitted to the atmosphere and affecting the global climate. Albeit the enzymatic source for DMS in eukaryotes was elucidated, namely a DMSP lyase (DL) called Alma1, we still lack basic knowledge regarding its taxonomic distribution. We defined unique sequence motifs which enable the identification of DL homologs (DLHs) in model systems and environmental populations. We used these motifs to predict DLHs in diverse algae by analyzing hundreds of genomic and transcriptomic sequences from model systems under stress conditions and from environmental samples. Our findings show that the DL enzyme is more taxonomically widespread than previously thought, as it is encoded by known algal taxa as haptophytes and dinoflagellates, but also by chlorophytes, pelagophytes and diatoms, which were conventionally considered to lack the DL enzyme. By exploring the Tara Oceans database, we showed that DLHs are widespread across the oceans and are predominantly expressed by dinoflagellates. Certain dinoflagellate DLHs were differentially expressed between the euphotic and mesopelagic zones, suggesting a functional specialization and an involvement in the metabolic plasticity of mixotrophic dinoflagellates. In specific regions as the Southern Ocean, DLH expression by haptophytes and diatoms was correlated with environmental drivers such as nutrient availability. The expanded repertoire of putative DL enzymes from diverse microbial origins and geographic niches suggests new potential players in the marine sulfur cycle and provides a foundation to study the cellular function of the DL enzyme in marine microbes.
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Affiliation(s)
- Adva Shemi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Shifra Ben-Dor
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Ron Rotkopf
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Orly Dym
- Structural Proteomics Unit, Faculty of Biochemistry, Weizmann Institute of Science, Rehovot, 7610001, Israel
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 7610001, Israel.
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4
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Alves-de-Souza C, Guillou L. Parvilucifera rostrata. Trends Parasitol 2023; 39:227-228. [PMID: 36642690 DOI: 10.1016/j.pt.2022.12.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 12/23/2022] [Accepted: 12/25/2022] [Indexed: 01/15/2023]
Affiliation(s)
- Catharina Alves-de-Souza
- Algal Resources Collection, MARBIONC, Center for Marine Science, University of North Carolina Wilmington, Wilmington, NC 28409, USA.
| | - Laure Guillou
- Sorbonne Université, CNRS, UMR7144 Adaptation et Diversité en Milieu Marin, Ecology of Marine Plankton (ECOMAP), Station Biologique de Roscoff, 29680 Roscoff, France
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5
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Jeon BS, Park MG. Comparative biological traits of perkinsozoan parasitoids infecting marine dinoflagellates. HARMFUL ALGAE 2023; 123:102390. [PMID: 36894211 DOI: 10.1016/j.hal.2023.102390] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 01/16/2023] [Accepted: 01/28/2023] [Indexed: 06/18/2023]
Abstract
The number of perkinsozoan parasitoid species known to infect dinoflagellates has increased to 11 over the last two decades. However, most of the current knowledge about the autecology of perkinsozoan parasitoids of dinoflagellates has derived from studies of one or two species, thereby making it difficult to directly compare their biological traits at the same time and even their potentials as biological control agents if they are to be exploited to mitigate harmful dinoflagellate blooms in the field. This study investigated total generation time, the number of zoospores produced per sporangium, zoospore size, swimming speed, parasite prevalence, zoospore survival and success rate, and host range and susceptibility for five perkinsozoan parasitoids. Four of the species (Dinovorax pyriformis, Tuberlatum coatsi, Parvilucifera infectans, and P. multicavata) were from the family Parviluciferaceae and one (Pararosarium dinoexitiosum) was from the family Pararosariidae, with dinoflagellate Alexandrium pacificum employed as a common host. Distinct differences in the biological traits of the five perkinsozoan parasitoid species were found, suggesting that the fitness of these parasitoids for the common host species differs. These results thus offer useful background information for the understanding of the impacts of parasitoids on the natural host population and for the design of numerical modeling including the host-parasitoid systems and biocontrol experiments in the field.
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Affiliation(s)
- Boo Seong Jeon
- LOHABE, Department of Oceanography, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Myung Gil Park
- LOHABE, Department of Oceanography, Chonnam National University, Gwangju 61186, Republic of Korea.
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6
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Temperature Affects the Biological Control of Dinoflagellates by the Generalist Parasitoid Parvilucifera rostrata. Microorganisms 2022; 10:microorganisms10020385. [PMID: 35208840 PMCID: PMC8874431 DOI: 10.3390/microorganisms10020385] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 01/27/2022] [Accepted: 02/03/2022] [Indexed: 02/04/2023] Open
Abstract
The increase in emerging harmful algal blooms in the last decades has led to an extensive concern in understanding the mechanisms behind these events. In this paper, we assessed the growth of two blooming dinoflagellates (Alexandrium minutum and Heterocapsa triquetra) and their susceptibility to infection by the generalist parasitoid Parvilucifera rostrata under a temperature gradient. The growth of the two dinoflagellates differed across a range of temperatures representative of the Penzé Estuary (13 to 22 °C) in early summer. A. minutum growth increased across this range and was the highest at 19 and 22 °C, whereas H. triquetra growth was maximal at intermediate temperatures (15–18 °C). Interestingly, the effect of temperature on the parasitoid infectivity changed depending on which host dinoflagellate was infected with the dinoflagellate responses to temperature following a positive trend in A. minutum (higher infections at 20–22 °C) and a unimodal trend in H. triquetra (higher infections at 18 °C). Low temperatures negatively affected parasitoid infections in both hosts (i.e., “thermal refuge”). These results demonstrate how temperature shifts may not only affect bloom development in microalgal species but also their control by parasitoids.
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7
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Itoïz S, Metz S, Derelle E, Reñé A, Garcés E, Bass D, Soudant P, Chambouvet A. Emerging Parasitic Protists: The Case of Perkinsea. Front Microbiol 2022; 12:735815. [PMID: 35095782 PMCID: PMC8792838 DOI: 10.3389/fmicb.2021.735815] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2021] [Accepted: 11/25/2021] [Indexed: 11/13/2022] Open
Abstract
The last century has witnessed an increasing rate of new disease emergence across the world leading to permanent loss of biodiversity. Perkinsea is a microeukaryotic parasitic phylum composed of four main lineages of parasitic protists with broad host ranges. Some of them represent major ecological and economical threats because of their geographically invasive ability and pathogenicity (leading to mortality events). In marine environments, three lineages are currently described, the Parviluciferaceae, the Perkinsidae, and the Xcellidae, infecting, respectively, dinoflagellates, mollusks, and fish. In contrast, only one lineage is officially described in freshwater environments: the severe Perkinsea infectious agent infecting frog tadpoles. The advent of high-throughput sequencing methods, mainly based on 18S rRNA assays, showed that Perkinsea is far more diverse than the previously four described lineages especially in freshwater environments. Indeed, some lineages could be parasites of green microalgae, but a formal nature of the interaction needs to be explored. Hence, to date, most of the newly described aquatic clusters are only defined by their environmental sequences and are still not (yet) associated with any host. The unveiling of this microbial black box presents a multitude of research challenges to understand their ecological roles and ultimately to prevent their most negative impacts. This review summarizes the biological and ecological traits of Perkinsea-their diversity, life cycle, host preferences, pathogenicity, and highlights their diversity and ubiquity in association with a wide range of hosts.
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Affiliation(s)
- Sarah Itoïz
- Univ Brest, CNRS, IRD, Ifremer, LEMAR, Plouzané, France
| | | | | | - Albert Reñé
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSIC, Pg. Marítim de la Barceloneta, Barcelona, Spain
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSIC, Pg. Marítim de la Barceloneta, Barcelona, Spain
| | - David Bass
- Centre for Environment, Fisheries and Aquaculture Science (Cefas), Weymouth, United Kingdom
- Department of Life Sciences, The Natural History Museum, London, United Kingdom
- Biosciences, University of Exeter, Exeter, United Kingdom
| | | | - Aurélie Chambouvet
- Univ Brest, CNRS, IRD, Ifremer, LEMAR, Plouzané, France
- Sorbonne Université, CNRS, UMR 7144 Adaptation et Diversité en Milieu Marin, Ecology of Marine Plankton (ECOMAP), Station Biologique de Roscoff SBR, Roscoff, France
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8
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Deng Y, Vallet M, Pohnert G. Temporal and Spatial Signaling Mediating the Balance of the Plankton Microbiome. ANNUAL REVIEW OF MARINE SCIENCE 2022; 14:239-260. [PMID: 34437810 DOI: 10.1146/annurev-marine-042021-012353] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The annual patterns of plankton succession in the ocean determine ecological and biogeochemical cycles. The temporally fluctuating interplay between photosynthetic eukaryotes and the associated microbiota balances the composition of aquatic planktonic ecosystems. In addition to nutrients and abiotic factors, chemical signaling determines the outcome of interactions between phytoplankton and their associated microbiomes. Chemical mediators control essential processes, such as the development of key morphological, physiological, behavioral, and life-history traits during algal growth. These molecules thus impact species succession and community composition across time and space in processes that are highlighted in this review. We focus on spatial, seasonal, and physiological dynamics that occur during the early association of algae with bacteria, the exponential growth of a bloom, and its decline and recycling. We also discuss how patterns from field data and global surveys might be linked to the actions of metabolic markers in natural phytoplankton assemblages.
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Affiliation(s)
- Yun Deng
- Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, 07743 Jena, Germany;
| | - Marine Vallet
- Research Group Phytoplankton Community Interactions, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany
| | - Georg Pohnert
- Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, 07743 Jena, Germany;
- Research Group Phytoplankton Community Interactions, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany
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9
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Shemi A, Alcolombri U, Schatz D, Farstey V, Vincent F, Rotkopf R, Ben-Dor S, Frada MJ, Tawfik DS, Vardi A. Dimethyl sulfide mediates microbial predator-prey interactions between zooplankton and algae in the ocean. Nat Microbiol 2021; 6:1357-1366. [PMID: 34697459 DOI: 10.1038/s41564-021-00971-3] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2021] [Accepted: 09/01/2021] [Indexed: 12/11/2022]
Abstract
Phytoplankton are key components of the oceanic carbon and sulfur cycles1. During bloom events, some species can emit large amounts of the organosulfur volatile dimethyl sulfide (DMS) into the ocean and consequently the atmosphere, where it can modulate aerosol formation and affect climate2,3. In aquatic environments, DMS plays an important role as a chemical signal mediating diverse trophic interactions. Yet, its role in microbial predator-prey interactions remains elusive with contradicting evidence for its role in either algal chemical defence or in the chemo-attraction of grazers to prey cells4,5. Here we investigated the signalling role of DMS during zooplankton-algae interactions by genetic and biochemical manipulation of the algal DMS-generating enzyme dimethylsulfoniopropionate lyase (DL) in the bloom-forming alga Emiliania huxleyi6. We inhibited DL activity in E. huxleyi cells in vivo using the selective DL-inhibitor 2-bromo-3-(dimethylsulfonio)-propionate7 and overexpressed the DL-encoding gene in the model diatom Thalassiosira pseudonana. We showed that algal DL activity did not serve as an anti-grazing chemical defence but paradoxically enhanced predation by the grazer Oxyrrhis marina and other microzooplankton and mesozooplankton, including ciliates and copepods. Consumption of algal prey with induced DL activity also promoted O. marina growth. Overall, our results demonstrate that DMS-mediated grazing may be ecologically important and prevalent during prey-predator dynamics in aquatic ecosystems. The role of algal DMS revealed here, acting as an eat-me signal for grazers, raises fundamental questions regarding the retention of its biosynthetic enzyme through the evolution of dominant bloom-forming phytoplankton in the ocean.
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Affiliation(s)
- Adva Shemi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Uria Alcolombri
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.,Institute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, Zurich, Switzerland
| | - Daniella Schatz
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Viviana Farstey
- The Inter-University Institute for Marine Sciences, Eilat, Israel
| | - Flora Vincent
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Ron Rotkopf
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel
| | - Shifra Ben-Dor
- Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel
| | - Miguel J Frada
- The Inter-University Institute for Marine Sciences, Eilat, Israel.,Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Jerusalem, Israel
| | - Dan S Tawfik
- Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
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10
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Long M, Marie D, Szymczak J, Toullec J, Bigeard E, Sourisseau M, Le Gac M, Guillou L, Jauzein C. Dinophyceae can use exudates as weapons against the parasite Amoebophrya sp. (Syndiniales). ISME COMMUNICATIONS 2021; 1:34. [PMID: 37938261 PMCID: PMC9723556 DOI: 10.1038/s43705-021-00035-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Revised: 05/21/2021] [Accepted: 06/02/2021] [Indexed: 05/09/2023]
Abstract
Parasites in the genus Amoebophrya sp. infest dinoflagellate hosts in marine ecosystems and can be determining factors in the demise of blooms, including toxic red tides. These parasitic protists, however, rarely cause the total collapse of Dinophyceae blooms. Experimental addition of parasite-resistant Dinophyceae (Alexandrium minutum or Scrippsiella donghaienis) or exudates into a well-established host-parasite coculture (Scrippsiella acuminata-Amoebophrya sp.) mitigated parasite success and increased the survival of the sensitive host. This effect was mediated by waterborne molecules without the need for a physical contact. The strength of the parasite defenses varied between dinoflagellate species, and strains of A. minutum and was enhanced with increasing resistant host cell concentrations. The addition of resistant strains or exudates never prevented the parasite transmission entirely. Survival time of Amoebophrya sp. free-living stages (dinospores) decreased in presence of A. minutum but not of S. donghaienis. Parasite progeny drastically decreased with both species. Integrity of the dinospore membrane was altered by A. minutum, providing a first indication on the mode of action of anti-parasitic molecules. These results demonstrate that extracellular defenses can be an effective strategy against parasites that protects not only the resistant cells producing them, but also the surrounding community.
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Affiliation(s)
- Marc Long
- IFREMER, Centre de Brest, DYNECO Pelagos, F-29280, Plouzané, France.
| | - Dominique Marie
- UMR 7144 Sorbonne Université & Centre National pour la Recherche Scientifique, «Adaptation and Diversity in Marine Environment», Team «Ecology of Marine Plankton, ECOMAP», Station Biologique de Roscoff, 29680, Roscoff, France
| | - Jeremy Szymczak
- UMR 7144 Sorbonne Université & Centre National pour la Recherche Scientifique, «Adaptation and Diversity in Marine Environment», Team «Ecology of Marine Plankton, ECOMAP», Station Biologique de Roscoff, 29680, Roscoff, France
| | - Jordan Toullec
- IFREMER, Centre de Brest, DYNECO Pelagos, F-29280, Plouzané, France
| | - Estelle Bigeard
- UMR 7144 Sorbonne Université & Centre National pour la Recherche Scientifique, «Adaptation and Diversity in Marine Environment», Team «Ecology of Marine Plankton, ECOMAP», Station Biologique de Roscoff, 29680, Roscoff, France
| | - Marc Sourisseau
- IFREMER, Centre de Brest, DYNECO Pelagos, F-29280, Plouzané, France
| | - Mickael Le Gac
- IFREMER, Centre de Brest, DYNECO Pelagos, F-29280, Plouzané, France
| | - Laure Guillou
- UMR 7144 Sorbonne Université & Centre National pour la Recherche Scientifique, «Adaptation and Diversity in Marine Environment», Team «Ecology of Marine Plankton, ECOMAP», Station Biologique de Roscoff, 29680, Roscoff, France
| | - Cécile Jauzein
- IFREMER, Centre de Brest, DYNECO Pelagos, F-29280, Plouzané, France
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Alacid E, Reñé A, Gallisai R, Paloheimo A, Garcés E, Kremp A. Description of two new coexisting parasitoids of blooming dinoflagellates in the Baltic sea: Parvilucifera catillosa sp. nov. and Parvilucifera sp. (Perkinsea, Alveolata). HARMFUL ALGAE 2020; 100:101944. [PMID: 33298365 DOI: 10.1016/j.hal.2020.101944] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 11/06/2020] [Accepted: 11/09/2020] [Indexed: 06/12/2023]
Abstract
Perkinsea are a group of intracellular protist parasites that inhabit all types of aquatic environments and cause significant population declines of a wide variety of hosts. However, the diversity of this lineage is mostly represented by environmental rDNA sequences. Complete descriptions of Perkinsea that infect marine dinoflagellates have increased in recent literature due to the identification, isolation and culturing of representatives during bloom events, contributing to expand the knowledge on the diversity and ecology of the group. Shallow coastal areas in the Baltic Sea suffer seasonal dinoflagellate blooms. In summer 2016, two parasitoids were isolated during a Kryptoperidinium foliaceum bloom in the Baltic Sea. Morphological features and sequences of the small and large subunit of the ribosomal DNA gene revealed these two parasitoids were new species that belong to the genus Parvilucifera. This is the first time that Parvilucifera infections are reported in the Inner Baltic Sea. The first species, Parvilucifera sp. has some morphological and phylogenetic features in common with P. sinerae and P. corolla, although its ultrastructure could not be studied and the formal description could not be done. The second new species, named Parvilucifera catillosa, has several distinct morphological features in its zoospores (e.g. the presence of a rostrum), and in the shape and size of the apertures in the sporangium stage, which are larger and more protuberant than in the other species of the genus. Infections observed in the field and cross-infection experiments determined that the host range of both Parvilucifera species was restricted to dinoflagellates, each one showing a different host preference. The coexistence in the same environment by the two closely related parasitoids with very similar life cycles suggests that their niche separation is the preferred host.
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Affiliation(s)
- Elisabet Alacid
- Departament de Biologia Marina i Oceanografia. Institut de Ciències del Mar (CSIC). Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona, Catalonia, Spain; Department of Zoology, University of Oxford, 11a Mansfield Rd, Oxford, OX1 3SZ, United Kingdom.
| | - Albert Reñé
- Departament de Biologia Marina i Oceanografia. Institut de Ciències del Mar (CSIC). Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona, Catalonia, Spain
| | - Rachele Gallisai
- Departament de Biologia Marina i Oceanografia. Institut de Ciències del Mar (CSIC). Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona, Catalonia, Spain
| | - Aurora Paloheimo
- Finnish Environment Institute (SYKE), Marine Research Laboratory, Agnes Sjöbergin katu 2, 00790 Helsinki, Finland
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia. Institut de Ciències del Mar (CSIC). Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona, Catalonia, Spain
| | - Anke Kremp
- Finnish Environment Institute (SYKE), Marine Research Laboratory, Agnes Sjöbergin katu 2, 00790 Helsinki, Finland; Leibniz Institute for Baltic Sea Research Warnemünde, Department of Biological Oceanography, Seestraße 15, 18119 Rostock, Germany
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12
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Caruana AMN, Le Gac M, Hervé F, Rovillon GA, Geffroy S, Malo F, Abadie E, Amzil Z. Alexandrium pacificum and Alexandrium minutum: Harmful or environmentally friendly? MARINE ENVIRONMENTAL RESEARCH 2020; 160:105014. [PMID: 32907732 DOI: 10.1016/j.marenvres.2020.105014] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 04/29/2020] [Accepted: 05/10/2020] [Indexed: 06/11/2023]
Abstract
Alexandrium minutum and Alexandrium pacificum are representatives of the dinoflagellate genus that regularly proliferate on the French coasts and other global coastlines. These harmful species may threaten shellfish harvest and human health due to their ability to synthesize neurotoxic alkaloids of the saxitoxin group. However, some dinoflagellates such as A. minutum, and as reported here A. pacificum as well, may also have a beneficial impact on the environment by producing dimethylsulfoniopropionate-DMSP, the precursor of dimethylsulfur-DMS and sulfate aerosols involved in climate balance. However, environmental conditions might influence Alexandrium physiology towards the production of harmful or environmentally friendly compounds. After assessing the influence of two salinity regimes (33 and 38) relative to each species origin (Atlantic French coast and Mediterranean Lagoon respectively), it appears that DMSP and toxin content was variable between the three experimented strains and that higher salinity disadvantages toxin production and tends to favor the production of the osmolytes DMSP and glycine betaine. Hence, this key metabolite production is strain and species-dependent and is influenced by environmental conditions of salinity which in turn, can diversely affect the environment. Widespread coastal blooms of A. minutum and A. pacificum, although being a risk for seafood contamination with toxins, are also a DMSP and DMS source that potentially contribute to the ecosystem structuration and climate. Regarding recent advances in DMSP biosynthesis pathway, 3 dsyB homologs were found in A. minutum but no homolog of the diatom sequence TpMMT.
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Affiliation(s)
| | | | - Fabienne Hervé
- IFREMER-Phycotoxins Laboratory, F - 44311, Nantes, France
| | | | - Solène Geffroy
- IFREMER-Phycotoxins Laboratory, F - 44311, Nantes, France
| | - Florent Malo
- IFREMER-Phycotoxins Laboratory, F - 44311, Nantes, France
| | - Eric Abadie
- MARBEC, Université de Montpellier, CNRS, IFREMER, IRD, Sète, France
| | - Zouher Amzil
- IFREMER-Phycotoxins Laboratory, F - 44311, Nantes, France
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13
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Lavoie M, Galí M, Sévigny C, Kieber DJ, Sunda WG, Spiese CE, Maps F, Levasseur M. Modelling dimethylsulfide diffusion in the algal external boundary layer: implications for mutualistic and signalling roles. Environ Microbiol 2018; 20:4157-4169. [DOI: 10.1111/1462-2920.14417] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 08/26/2018] [Accepted: 09/07/2018] [Indexed: 11/27/2022]
Affiliation(s)
- Michel Lavoie
- Québec‐Océan and Unité Mixte Internationale Takuvik Ulaval‐CNRS, Département de Biologie Université Laval Québec Québec G1V 0A6 Canada
| | - Martí Galí
- Québec‐Océan and Unité Mixte Internationale Takuvik Ulaval‐CNRS, Département de Biologie Université Laval Québec Québec G1V 0A6 Canada
| | - Caroline Sévigny
- Institut des sciences de la mer de Rimouski Université du Québec à Rimouski 310 allée des Ursulines, Québec G5L 3A1 Canada
| | - David J. Kieber
- Department of Chemistry State University of New York, College of Environmental Science and Forestry Syracuse, NY 13210 USA
| | - William G. Sunda
- Department of Marine Sciences University of North Carolina 292 Old Piedmont Circle, Chapel Hill NC 27516 USA
| | - Christopher E. Spiese
- Donald J. Bettinger Department of Chemistry and Biochemistry Ohio Northern University 525 South Main St, Ada OH 45810 USA
| | - Frédéric Maps
- Québec‐Océan and Unité Mixte Internationale Takuvik Ulaval‐CNRS, Département de Biologie Université Laval Québec Québec G1V 0A6 Canada
| | - Maurice Levasseur
- Québec‐Océan and Unité Mixte Internationale Takuvik Ulaval‐CNRS, Département de Biologie Université Laval Québec Québec G1V 0A6 Canada
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14
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Farhat S, Florent I, Noel B, Kayal E, Da Silva C, Bigeard E, Alberti A, Labadie K, Corre E, Aury JM, Rombauts S, Wincker P, Guillou L, Porcel BM. Comparative Time-Scale Gene Expression Analysis Highlights the Infection Processes of Two Amoebophrya Strains. Front Microbiol 2018; 9:2251. [PMID: 30333799 PMCID: PMC6176090 DOI: 10.3389/fmicb.2018.02251] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2018] [Accepted: 09/04/2018] [Indexed: 01/31/2023] Open
Abstract
Understanding factors that generate, maintain, and constrain host-parasite associations is of major interest to biologists. Although little studied, many extremely virulent micro-eukaryotic parasites infecting microalgae have been reported in the marine plankton. This is the case for Amoebophrya, a diverse and highly widespread group of Syndiniales infecting and potentially controlling dinoflagellate populations. Here, we analyzed the time-scale gene expression of a complete infection cycle of two Amoebophrya strains infecting the same host (the dinoflagellate Scrippsiella acuminata), but diverging by their host range (one infecting a single host, the other infecting more than one species). Over two-thirds of genes showed two-fold differences in expression between at least two sampled stages of the Amoebophrya life cycle. Genes related to carbohydrate metabolism as well as signaling pathways involving proteases and transporters were overexpressed during the free-living stage of the parasitoid. Once inside the host, all genes related to transcription and translation pathways were actively expressed, suggesting the rapid and extensive protein translation needed following host-cell invasion. Finally, genes related to cellular division and components of the flagellum organization were overexpressed during the sporont stage. In order to gain a deeper understanding of the biological basis of the host-parasitoid interaction, we screened proteins involved in host-cell recognition, invasion, and protection against host-defense identified in model apicomplexan parasites. Very few of the genes encoding critical components of the parasitic lifestyle of apicomplexans could be unambiguously identified as highly expressed in Amoebophrya. Genes related to the oxidative stress response were identified as highly expressed in both parasitoid strains. Among them, the correlated expression of superoxide dismutase/ascorbate peroxidase in the specialist parasite was consistent with previous studies on Perkinsus marinus defense. However, this defense process could not be identified in the generalist Amoebophrya strain, suggesting the establishment of different strategies for parasite protection related to host specificity.
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Affiliation(s)
- Sarah Farhat
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Université Paris-Saclay, Evry, France
| | - Isabelle Florent
- Communication Molecules and Adaptation of Microorganisms, National Museum of Natural History, CNRS, Paris, France
| | - Benjamin Noel
- Genoscope, Institut François Jacob, CEA, Evry, France
| | - Ehsan Kayal
- Sorbonne Universités, Université Pierre et Marie Curie-Paris 6, CNRS, UMR 7144, Station Biologique de Roscoff, Roscoff, France
| | | | - Estelle Bigeard
- Sorbonne Universités, Université Pierre et Marie Curie-Paris 6, CNRS, UMR 7144, Station Biologique de Roscoff, Roscoff, France
| | | | | | - Erwan Corre
- Sorbonne Universités, Université Pierre et Marie Curie-Paris 6, CNRS, UMR 7144, Station Biologique de Roscoff, Roscoff, France
| | | | - Stephane Rombauts
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
| | - Patrick Wincker
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Université Paris-Saclay, Evry, France
| | - Laure Guillou
- Sorbonne Universités, Université Pierre et Marie Curie-Paris 6, CNRS, UMR 7144, Station Biologique de Roscoff, Roscoff, France
| | - Betina M Porcel
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Université Paris-Saclay, Evry, France
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15
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Zhang S, Merino N, Okamoto A, Gedalanga P. Interkingdom microbial consortia mechanisms to guide biotechnological applications. Microb Biotechnol 2018; 11:833-847. [PMID: 30014573 PMCID: PMC6116752 DOI: 10.1111/1751-7915.13300] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2017] [Revised: 06/19/2018] [Accepted: 06/21/2018] [Indexed: 01/01/2023] Open
Abstract
Microbial consortia are capable of surviving diverse conditions through the formation of synergistic population-level structures, such as stromatolites, microbial mats and biofilms. Biotechnological applications are poised to capitalize on these unique interactions. However, current artificial co-cultures constructed for societal benefits, including biosynthesis, agriculture and bioremediation, face many challenges to perform as well as natural consortia. Interkingdom microbial consortia tend to be more robust and have higher productivity compared with monocultures and intrakingdom consortia, but the control and design of these diverse artificial consortia have received limited attention. Further, feasible research techniques and instrumentation for comprehensive mechanistic insights have only recently been established for interkingdom microbial communities. Here, we review these recent advances in technology and our current understanding of microbial interaction mechanisms involved in sustaining or developing interkingdom consortia for biotechnological applications. Some of the interactions among members from different kingdoms follow similar mechanisms observed for intrakingdom microbial consortia. However, unique interactions in interkingdom consortia, including endosymbiosis or interkingdom-specific cell-cell interactions, provide improved mitigation to external stresses and inhibitory compounds. Furthermore, antagonistic interactions among interkingdom species can promote fitness, diversification and adaptation, along with the production of beneficial metabolites and enzymes for society. Lastly, we shed light on future research directions to develop study methods at the level of metabolites, genes and meta-omics. These potential research methods could lead to the control and utilization of highly diverse microbial communities.
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Affiliation(s)
- Shu Zhang
- Global Research Center for Environment and Energy based on Nanomaterials ScienceNational Institute for Material Science1‐1 NamikiTsukubaIbarakiJapan
- Department of Molecular Microbiology and ImmunologyNorris Comprehensive Cancer CenterUniversity of Southern California1441 Eastlake StreetLos AngelesCA90033USA
- Present address:
Section of Infection and ImmunityHerman Ostrow School of DentistryUniversity of Southern CaliforniaCA90089‐0641USA
| | - Nancy Merino
- Earth‐Life Science InstituteTokyo Institute of Technology, 2‐12‐1‐I7E‐323Ookayama, Meguro‐kuTokyo 152‐8550Japan
- Department of Earth SciencesUniversity of Southern California, 835 Bloom Walk, SHS 562Los AngelesCA 90089‐0740USA
| | - Akihiro Okamoto
- Global Research Center for Environment and Energy based on Nanomaterials ScienceNational Institute for Material Science1‐1 NamikiTsukubaIbarakiJapan
| | - Phillip Gedalanga
- Department of Health ScienceCalifornia State University Fullerton, 800 North State College BoulevardFullertonCA 92831‐3599USA
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16
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Brosnahan ML, Ralston DK, Fischer AD, Solow AR, Anderson DM. Bloom termination of the toxic dinoflagellate Alexandrium catenella: Vertical migration behavior, sediment infiltration, and benthic cyst yield. LIMNOLOGY AND OCEANOGRAPHY 2017; 62:2829-2849. [PMID: 29263558 PMCID: PMC5725721 DOI: 10.1002/lno.10664] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2017] [Revised: 06/12/2017] [Accepted: 07/10/2017] [Indexed: 05/26/2023]
Abstract
New resting cyst production is crucial for the survival of many microbial eukaryotes including phytoplankton that cause harmful algal blooms. Production in situ has previously been estimated through sediment trap deployments, but here was instead assessed through estimation of the total number of planktonic cells and new resting cysts produced by a localized, inshore bloom of Alexandrium catenella, a dinoflagellate that is a globally important cause of paralytic shellfish poisoning. Our approach utilizes high frequency, automated water monitoring, weekly observation of new cyst production, and pre- and post-bloom spatial surveys of total resting cyst abundance. Through this approach, new cyst recruitment within the study area was shown to account for at least 10.9% ± 2.6% (SE) of the bloom's decline, ∼ 5× greater than reported from comparable, sediment trap based studies. The observed distribution and timing of new cyst recruitment indicate that: (1) planozygotes, the immediate precursor to cysts in the life cycle, migrate nearer to the water surface than other planktonic stages and (2) encystment occurs after planozygote settlement on bottom sediments. Near surface localization by planozygotes explains the ephemerality of red surface water discoloration by A. catenella blooms, and also enhances the dispersal of new cysts. Following settlement, bioturbation and perhaps active swimming promote sediment infiltration by planozygotes, reducing the extent of cyst redistribution between blooms. The concerted nature of bloom sexual induction, especially in the context of an observed upper limit to A. catenella bloom intensities and heightened susceptibility of planozygotes to the parasite Amoebophrya, is also discussed.
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Affiliation(s)
| | - David K. Ralston
- Applied Ocean Physics and EngineeringWoods Hole Oceanographic InstitutionWoods HoleMassachusetts
| | - Alexis D. Fischer
- Biology DepartmentWoods Hole Oceanographic InstitutionWoods HoleMassachusetts
| | - Andrew R. Solow
- Marine Policy Center, Woods Hole Oceanographic InstitutionWoods HoleMassachusetts
| | - Donald M. Anderson
- Biology DepartmentWoods Hole Oceanographic InstitutionWoods HoleMassachusetts
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17
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Alacid E, Reñé A, Camp J, Garcés E. In situ Occurrence, Prevalence and Dynamics of Parvilucifera Parasitoids during Recurrent Blooms of the Toxic Dinoflagellate Alexandrium minutum. Front Microbiol 2017; 8:1624. [PMID: 28912757 PMCID: PMC5583427 DOI: 10.3389/fmicb.2017.01624] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2017] [Accepted: 08/10/2017] [Indexed: 11/26/2022] Open
Abstract
Dinoflagellate blooms are natural phenomena that often occur in coastal areas, which in addition to their large number of nutrient-rich sites are characterized by highly restricted hydrodynamics within bays, marinas, enclosed beaches, and harbors. In these areas, massive proliferations of dinoflagellates have harmful effects on humans and the ecosystem. However, the high cell density reached during blooms make them vulnerable to parasitic infections. Under laboratory conditions parasitoids are able to exterminate an entire host population. In nature, Parvilucifera parasitoids infect the toxic dinoflagellate Alexandrium minutum during bloom conditions but their prevalence and impact remain unexplored. In this study, we evaluated the in situ occurrence, prevalence, and dynamics of Parvilucifera parasitoids during recurrent blooms of A. minutum in a confined site in the NW Mediterranean Sea as well as the contribution of parasitism to bloom termination. Parvilucifera parasitoids were recurrently detected from 2009 to 2013, during seasonal outbreaks of A. minutum. Parasitic infections in surface waters occurred after the abundance of A. minutum reached 104–105 cells L−1, suggesting a density threshold beyond which Parvilucifera transmission is enhanced and the number of infected cells increases. Moreover, host and parasitoid abundances were not in phase. Instead, there was a lag between maximum A. minutum and Parvilucifera densities, indicative of a delayed density-dependent response of the parasitoid to host abundances, similar to the temporal dynamics of predator-prey interactions. The highest parasitoid prevalence was reached after a peak in host abundance and coincided with the decay phase of the bloom, when a maximum of 38% of the A. minutum population was infected. According to our estimates, Parvilucifera infections accounted for 5–18% of the total observed A. minutum mortality, which suggested that the contribution of parasitism to bloom termination is similar to that of other biological factors, such as encystment and grazing.
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Affiliation(s)
- Elisabet Alacid
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSICBarcelona, Spain
| | - Albert Reñé
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSICBarcelona, Spain
| | - Jordi Camp
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSICBarcelona, Spain
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, CSICBarcelona, Spain
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18
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Dani KGS, Loreto F. Trade-Off Between Dimethyl Sulfide and Isoprene Emissions from Marine Phytoplankton. TRENDS IN PLANT SCIENCE 2017; 22:361-372. [PMID: 28242195 DOI: 10.1016/j.tplants.2017.01.006] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2016] [Revised: 01/04/2017] [Accepted: 01/24/2017] [Indexed: 05/14/2023]
Abstract
Marine phytoplankton emit volatile organic compounds (VOCs) such as dimethyl sulfide (DMS) and isoprene that influence air quality, cloud dynamics, and planetary albedo. We show that globally (i) marine phytoplankton taxa tend to emit either DMS or isoprene, and (ii) sea-water surface concentration and emission hotspots of DMS and isoprene have opposite latitudinal gradients. We argue that a convergence of antioxidant functions between DMS and isoprene is possible, driven by potential metabolic competition for photosynthetic substrates. Linking phytoplankton emission traits to their latitudinal niches, we hypothesize that natural selection favors DMS emission in cold (polar) waters and isoprene emission in warm (tropical) oceans, and that global warming may expand the geographic range of marine isoprene-emitters. A trade-off between DMS and isoprene at metabolic, organismal, and geographic levels may have important consequences for future marine biosphere-atmosphere interactions.
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Affiliation(s)
- K G Srikanta Dani
- Istituto per lo Studio degli Ecosistemi, Consiglio Nazionale delle Ricerche, Via Madonna del Piano 10, Sesto Fiorentino, 50019 Firenze, Italy; School of Biology, Indian Institute of Science Education and Research, Thiruvananthapuram, 695016 Kerala, India.
| | - Francesco Loreto
- Dipartimento di Scienze Bio-Agroalimentari, Consiglio Nazionale delle Ricerche, Piazzale Aldo Moro 7, 00185 Roma, Italy.
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19
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Life-cycle, ultrastructure, and phylogeny of Parvilucifera corolla sp. nov. (Alveolata, Perkinsozoa), a parasitoid of dinoflagellates. Eur J Protistol 2017; 58:9-25. [DOI: 10.1016/j.ejop.2016.11.006] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2016] [Revised: 11/25/2016] [Accepted: 11/25/2016] [Indexed: 11/17/2022]
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20
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Gardner SG, Nielsen DA, Laczka O, Shimmon R, Beltran VH, Ralph PJ, Petrou K. Dimethylsulfoniopropionate, superoxide dismutase and glutathione as stress response indicators in three corals under short-term hyposalinity stress. Proc Biol Sci 2017; 283:rspb.2015.2418. [PMID: 26865302 DOI: 10.1098/rspb.2015.2418] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Corals are among the most active producers of dimethylsulfoniopropionate (DMSP), a key molecule in marine sulfur cycling, yet the specific physiological role of DMSP in corals remains elusive. Here, we examine the oxidative stress response of three coral species (Acropora millepora, Stylophora pistillata and Pocillopora damicornis) and explore the antioxidant role of DMSP and its breakdown products under short-term hyposalinity stress. Symbiont photosynthetic activity declined with hyposalinity exposure in all three reef-building corals. This corresponded with the upregulation of superoxide dismutase and glutathione in the animal host of all three species. For the symbiont component, there were differences in antioxidant regulation, demonstrating differential responses to oxidative stress between the Symbiodinium subclades. Of the three coral species investigated, only A. millepora provided any evidence of the role of DMSP in the oxidative stress response. Our study reveals variability in antioxidant regulation in corals and highlights the influence life-history traits, and the subcladal differences can have on coral physiology. Our data expand on the emerging understanding of the role of DMSP in coral stress regulation and emphasizes the importance of exploring both the host and symbiont responses for defining the threshold of the coral holobiont to hyposalinity stress.
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Affiliation(s)
- Stephanie G Gardner
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia
| | - Daniel A Nielsen
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia
| | - Olivier Laczka
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia
| | - Ronald Shimmon
- School of Chemistry and Forensic Science, University of Technology Sydney, Sydney, New South Wales, Australia
| | - Victor H Beltran
- Symbiont Culture Facility (SCF), Australian Institute of Marine Science (AIMS), Townsville, Queensland, Australia
| | - Peter J Ralph
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia
| | - Katherina Petrou
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology Sydney, Sydney, New South Wales, Australia
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21
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Fuentes-Grünewald C, Bayliss C, Fonlut F, Chapuli E. Long-term dinoflagellate culture performance in a commercial photobioreactor: Amphidinium carterae case. BIORESOURCE TECHNOLOGY 2016; 218:533-540. [PMID: 27395001 DOI: 10.1016/j.biortech.2016.06.128] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Revised: 06/24/2016] [Accepted: 06/25/2016] [Indexed: 06/06/2023]
Abstract
The aim of this work was to study the culture performance of a dinoflagellate in a commercial photobioreactor. The results obtained during this long-term experiment allow to confirm that Amphidinium carterae is a promising dinoflagellate that can be exploited successfully in closed systems, in semi-continuous mode in indoor and outdoor environments. The average results in an indoor 5cm light-path 320L photobioreactor were, in terms of specific growth rate (0.29d(-1)), duplication time (3.1d(-1)) and dry biomass productivity (78mgL(-1)d(-1)). Specific compounds production was found including ω3 and ω6 fatty acids and, pigments (Peridinin, β-carotene). These promising results, besides unique characteristics found during the exploitation period such as resistance to mechanical stress, self-control of contaminant organisms, and quick cells aggregation when the culture is not in turbulence conditions, makes A. carterae one of the new target species suitable for commercially exploitation on an industrial scale.
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Affiliation(s)
- C Fuentes-Grünewald
- College of Science, Department of Biosciences, Swansea University, Swansea SA2 8PP, United Kingdom.
| | - C Bayliss
- College of Science, Department of Biosciences, Swansea University, Swansea SA2 8PP, United Kingdom
| | - F Fonlut
- Bio Fuel Systems, S.A. Calle Sevilla, 6-8, 03690 San Vicente del Raspeig, Alicante, Spain
| | - E Chapuli
- Bio Fuel Systems, S.A. Calle Sevilla, 6-8, 03690 San Vicente del Raspeig, Alicante, Spain
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22
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A high-resolution time-depth view of dimethylsulphide cycling in the surface sea. Sci Rep 2016; 6:32325. [PMID: 27578300 PMCID: PMC5006029 DOI: 10.1038/srep32325] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Accepted: 08/04/2016] [Indexed: 11/08/2022] Open
Abstract
Emission of the trace gas dimethylsulphide (DMS) from the ocean influences the chemical and optical properties of the atmosphere, and the olfactory landscape for foraging marine birds, turtles and mammals. DMS concentration has been seen to vary across seasons and latitudes with plankton taxonomy and activity, and following the seascape of ocean's physics. However, whether and how does it vary at the time scales of meteorology and day-night cycles is largely unknown. Here we used high-resolution measurements over time and depth within coherent water patches in the open sea to show that DMS concentration responded rapidly but resiliently to mesoscale meteorological perturbation. Further, it varied over diel cycles in conjunction with rhythmic photobiological indicators in phytoplankton. Combining data and modelling, we show that sunlight switches and tunes the balance between net biological production and abiotic losses. This is an outstanding example of how biological diel rhythms affect biogeochemical processes.
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23
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Alacid E, Park MG, Turon M, Petrou K, Garcés E. A Game of Russian Roulette for a Generalist Dinoflagellate Parasitoid: Host Susceptibility Is the Key to Success. Front Microbiol 2016; 7:769. [PMID: 27252688 PMCID: PMC4878280 DOI: 10.3389/fmicb.2016.00769] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2016] [Accepted: 05/06/2016] [Indexed: 11/13/2022] Open
Abstract
Marine microbial interactions involving eukaryotes and their parasites play an important role in shaping the structure of phytoplankton communities. These interactions may alter population densities of the main host, which in turn may have consequences for the other concurrent species. The effect generalist parasitoids exert on a community is strongly dependent on the degree of host specificity. Parvilucifera sinerae is a generalist parasitoid able to infect a wide range of dinoflagellates, including toxic-bloom-forming species. A density-dependent chemical cue has been identified as the trigger for the activation of the infective stage. Together these traits make Parvilucifera-dinoflagellate hosts a good model to investigate the degree of specificity of a generalist parasitoid, and the potential effects that it could have at the community level. Here, we present for the first time, the strategy by which a generalist dinoflagellate parasitoid seeks out its host and determine whether it exhibits host preferences, highlighting key factors in determining infection. Our results demonstrate that in its infective stage, P. sinerae is able to sense potential hosts, but does not actively select among them. Instead, the parasitoids contact the host at random, governed by the encounter probability rate and once encountered, the chance to penetrate inside the host cell and develop the infection strongly depends on the degree of host susceptibility. As such, their strategy for persistence is more of a game of Russian roulette, where the chance of survival is dependent on the susceptibility of the host. Our study identifies P. sinerae as a potential key player in community ecology, where in mixed dinoflagellate communities consisting of hosts that are highly susceptible to infection, parasitoid preferences may mediate coexistence between host species, reducing the dominance of the superior competitor. Alternatively, it may increase competition, leading to species exclusion. If, however, highly susceptible hosts are absent from the community, the parasitoid population could suffer a dilution effect maintaining a lower parasitoid density. Therefore, both host community structure and host susceptibility will determine infectivity in the field.
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Affiliation(s)
- Elisabet Alacid
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar - Consejo Superior de Investigaciones Científicas Barcelona, Spain
| | - Myung G Park
- Laboratory of HAB Ecophysiology, Department of Oceanography, Chonnam National University Gwangju, South Korea
| | - Marta Turon
- Departament d'Ecologia Aquàtica, Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas Blanes, Spain
| | - Katherina Petrou
- School of Life Sciences, University of Technology Sydney, Sydney NSW, Australia
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar - Consejo Superior de Investigaciones Científicas Barcelona, Spain
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24
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Abstract
Covering: January 2013 to online publication December 2014This review summarizes recent research in the chemical ecology of marine pelagic ecosystems, and aims to provide a comprehensive overview of advances in the field in the time period covered. In order to highlight the role of chemical cues and toxins in plankton ecology this review has been organized by ecological interaction types starting with intraspecific interactions, then interspecific interactions (including facilitation and mutualism, host-parasite, allelopathy, and predator-prey), and finally community and ecosystem-wide interactions.
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Affiliation(s)
- Emily R Schwartz
- School of Biology, Aquatic Chemical Ecology Center, Institute for Bioengineering and Biosciences, Georgia Institute of Technology, Atlanta, GA 30332-0230, USA.
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New Insights into the Parasitoid Parvilucifera sinerae Life Cycle: The Development and Kinetics of Infection of a Bloom-forming Dinoflagellate Host. Protist 2015; 166:677-99. [DOI: 10.1016/j.protis.2015.09.001] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Revised: 09/01/2015] [Accepted: 09/12/2015] [Indexed: 11/20/2022]
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Alcolombri U, Ben-Dor S, Feldmesser E, Levin Y, Tawfik DS, Vardi A. MARINE SULFUR CYCLE. Identification of the algal dimethyl sulfide-releasing enzyme: A missing link in the marine sulfur cycle. Science 2015; 348:1466-9. [PMID: 26113722 DOI: 10.1126/science.aab1586] [Citation(s) in RCA: 116] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
Algal blooms produce large amounts of dimethyl sulfide (DMS), a volatile with a diverse signaling role in marine food webs that is emitted to the atmosphere, where it can affect cloud formation. The algal enzymes responsible for forming DMS from dimethylsulfoniopropionate (DMSP) remain unidentified despite their critical role in the global sulfur cycle. We identified and characterized Alma1, a DMSP lyase from the bloom-forming algae Emiliania huxleyi. Alma1 is a tetrameric, redox-sensitive enzyme of the aspartate racemase superfamily. Recombinant Alma1 exhibits biochemical features identical to the DMSP lyase in E. huxleyi, and DMS released by various E. huxleyi isolates correlates with their Alma1 levels. Sequence homology searches suggest that Alma1 represents a gene family present in major, globally distributed phytoplankton taxa and in other marine organisms.
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Affiliation(s)
- Uria Alcolombri
- Department of Biological Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel. Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Shifra Ben-Dor
- Bioinformatics and Biological Computing Unit, Biological Services, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Ester Feldmesser
- Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Yishai Levin
- Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Dan S Tawfik
- Department of Biological Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel.
| | - Assaf Vardi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 76100, Israel.
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Salinity as a regulator of DMSP degradation in Ruegeria pomeroyi DSS-3. J Microbiol 2014; 52:948-54. [PMID: 25277409 DOI: 10.1007/s12275-014-4409-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2014] [Accepted: 08/27/2014] [Indexed: 10/24/2022]
Abstract
Dimethylsulfoniopropionate (DMSP) is an important carbon and sulfur source to marine bacterial communities and the main precursor of dimethylsulfide (DMS), a gas that influences atmospheric chemistry and potentially the global climate. In nature, bacterial DMSP catabolism can yield different proportions of DMS and methanethiol (MeSH), but relatively little is known about the factors controlling the pathways of bacterial degradation that select between their formation (cleavage vs. demethiolation). In this study, we carried out experiments to evaluate the influence of salinity on the routes of DMSP catabolism in Ruegeria pomeroyi DSS-3. We monitored DMS and MeSH accumulation in cell suspensions grown in a range of salinities (10, 20, 30 ppt) and with different DMSP amendments (0, 50, 500 µM). Significantly higher concentrations of DMS accumulated in low salinity treatments (10 ppt; P < 0.001), in both Marine Basal Medium (MBM) and half-strength Yeast Tryptone Sea Salts (1/2 YTSS) media. Results showed a 47.1% and 87.5% decrease of DMS accumulation, from salinity 10 to 20 ppt, in MBM and 1/2 YTSS media, respectively. On the other hand, MeSH showed enhanced accumulations at higher salinities (20, 30 ppt), with a 90.6% increase of MeSH accumulation from the 20 ppt to the 30 ppt salinity treatments. Our results with R. pomeroyi DSS-3 in culture are in agreement with previous results from estuarine sediments and demonstrate that salinity can modulate selection of the DMSP enzymatic degradation routes, with a consequent potential impact on DMS and MeSH liberation into the atmosphere.
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Lepelletier F, Karpov SA, Le Panse S, Bigeard E, Skovgaard A, Jeanthon C, Guillou L. Parvilucifera rostrata sp. nov. (Perkinsozoa), a Novel Parasitoid that Infects Planktonic Dinoflagellates. Protist 2014; 165:31-49. [DOI: 10.1016/j.protis.2013.09.005] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2013] [Revised: 09/04/2013] [Accepted: 09/15/2013] [Indexed: 10/26/2022]
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A bacterial pathogen uses dimethylsulfoniopropionate as a cue to target heat-stressed corals. ISME JOURNAL 2013; 8:999-1007. [PMID: 24335830 DOI: 10.1038/ismej.2013.210] [Citation(s) in RCA: 98] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2013] [Revised: 10/06/2013] [Accepted: 10/08/2013] [Indexed: 11/08/2022]
Abstract
Diseases are an emerging threat to ocean ecosystems. Coral reefs, in particular, are experiencing a worldwide decline because of disease and bleaching, which have been exacerbated by rising seawater temperatures. Yet, the ecological mechanisms behind most coral diseases remain unidentified. Here, we demonstrate that a coral pathogen, Vibrio coralliilyticus, uses chemotaxis and chemokinesis to target the mucus of its coral host, Pocillopora damicornis. A primary driver of this response is the host metabolite dimethylsulfoniopropionate (DMSP), a key element in the global sulfur cycle and a potent foraging cue throughout the marine food web. Coral mucus is rich in DMSP, and we found that DMSP alone elicits chemotactic responses of comparable intensity to whole mucus. Furthermore, in heat-stressed coral fragments, DMSP concentrations increased fivefold and the pathogen's chemotactic response was correspondingly enhanced. Intriguingly, despite being a rich source of carbon and sulfur, DMSP is not metabolized by the pathogen, suggesting that it is used purely as an infochemical for host location. These results reveal a new role for DMSP in coral disease, demonstrate the importance of chemical signaling and swimming behavior in the recruitment of pathogens to corals and highlight the impact of increased seawater temperatures on disease pathways.
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