• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4658978)   Today's Articles (4159)   Subscriber (51286)
For: Shilova IN, Robidart JC, James Tripp H, Turk-Kubo K, Wawrik B, Post AF, Thompson AW, Ward B, Hollibaugh JT, Millard A, Ostrowski M, Scanlan DJ, Paerl RW, Stuart R, Zehr JP. A microarray for assessing transcription from pelagic marine microbial taxa. ISME J 2014;8:1476-91. [PMID: 24477198 DOI: 10.1038/ismej.2014.1] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2013] [Revised: 12/16/2013] [Accepted: 12/31/2013] [Indexed: 02/08/2023]
Number Cited by Other Article(s)
1
Muñoz-Marín MDC, Magasin JD, Zehr JP. Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes. PLoS One 2023;18:e0272674. [PMID: 37130101 PMCID: PMC10153697 DOI: 10.1371/journal.pone.0272674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2022] [Accepted: 02/18/2023] [Indexed: 05/03/2023]  Open
2
Muñoz-Marín MDC, Duhamel S, Björkman KM, Magasin JD, Díez J, Karl DM, García-Fernández JM. Differential Timing for Glucose Assimilation in Prochlorococcus and Coexistent Microbial Populations in the North Pacific Subtropical Gyre. Microbiol Spectr 2022;10:e0246622. [PMID: 36098532 PMCID: PMC9602893 DOI: 10.1128/spectrum.02466-22] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 08/22/2022] [Indexed: 01/04/2023]  Open
3
Kim S, Park S, Choi TG, Kim SS. Role of Short Chain Fatty Acids in Epilepsy and Potential Benefits of Probiotics and Prebiotics: Targeting “Health” of Epileptic Patients. Nutrients 2022;14:nu14142982. [PMID: 35889939 PMCID: PMC9322917 DOI: 10.3390/nu14142982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 07/17/2022] [Accepted: 07/19/2022] [Indexed: 11/16/2022]  Open
4
Rose A, Padovan A, Christian K, van de Kamp J, Kaestli M, Tsoukalis S, Bodrossy L, Gibb K. The Diversity of Nitrogen-Cycling Microbial Genes in a Waste Stabilization Pond Reveals Changes over Space and Time that Is Uncoupled to Changing Nitrogen Chemistry. MICROBIAL ECOLOGY 2021;81:1029-1041. [PMID: 33170351 PMCID: PMC8062326 DOI: 10.1007/s00248-020-01639-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 11/04/2020] [Indexed: 05/26/2023]
5
Zhou J, Lao YM, Song JT, Jin H, Zhu JM, Cai ZH. Temporal heterogeneity of microbial communities and metabolic activities during a natural algal bloom. WATER RESEARCH 2020;183:116020. [PMID: 32653764 DOI: 10.1016/j.watres.2020.116020] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Revised: 05/31/2020] [Accepted: 06/04/2020] [Indexed: 06/11/2023]
6
Shilova IN, Magasin JD, Mills MM, Robidart JC, Turk-Kubo KA, Zehr JP. Phytoplankton transcriptomic and physiological responses to fixed nitrogen in the California current system. PLoS One 2020;15:e0231771. [PMID: 32310982 PMCID: PMC7170224 DOI: 10.1371/journal.pone.0231771] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 03/31/2020] [Indexed: 11/18/2022]  Open
7
The Transcriptional Cycle Is Suited to Daytime N2 Fixation in the Unicellular Cyanobacterium "Candidatus Atelocyanobacterium thalassa" (UCYN-A). mBio 2019;10:mBio.02495-18. [PMID: 30602582 PMCID: PMC6315102 DOI: 10.1128/mbio.02495-18] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
8
Robidart JC, Magasin JD, Shilova IN, Turk-Kubo KA, Wilson ST, Karl DM, Scholin CA, Zehr JP. Effects of nutrient enrichment on surface microbial community gene expression in the oligotrophic North Pacific Subtropical Gyre. ISME JOURNAL 2018;13:374-387. [PMID: 30254320 DOI: 10.1038/s41396-018-0280-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 07/26/2018] [Accepted: 08/26/2018] [Indexed: 11/09/2022]
9
Markussen T, Happel EM, Teikari JE, Huchaiah V, Alneberg J, Andersson AF, Sivonen K, Riemann L, Middelboe M, Kisand V. Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change. Environ Microbiol 2018;20:3083-3099. [PMID: 30084235 DOI: 10.1111/1462-2920.14371] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Revised: 07/31/2018] [Accepted: 08/01/2018] [Indexed: 11/28/2022]
10
Bharudin I, Abu Bakar MF, Hashim NHF, Mat Isa MN, Alias H, Firdaus-Raih M, Md Illias R, Najimudin N, Mahadi NM, Abu Bakar FD, Abdul Murad AM. Unravelling the adaptation strategies employed by Glaciozyma antarctica PI12 on Antarctic sea ice. MARINE ENVIRONMENTAL RESEARCH 2018;137:169-176. [PMID: 29598997 DOI: 10.1016/j.marenvres.2018.03.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Revised: 03/09/2018] [Accepted: 03/19/2018] [Indexed: 06/08/2023]
11
Nitrogen Cycle Evaluation (NiCE) Chip for Simultaneous Analysis of Multiple N Cycle-Associated Genes. Appl Environ Microbiol 2018. [PMID: 29427421 DOI: 10.1128/aem.02615‐17] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
12
Nitrogen Cycle Evaluation (NiCE) Chip for Simultaneous Analysis of Multiple N Cycle-Associated Genes. Appl Environ Microbiol 2018;84:AEM.02615-17. [PMID: 29427421 DOI: 10.1128/aem.02615-17] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Accepted: 01/28/2018] [Indexed: 01/20/2023]  Open
13
Phosphate insensitive aminophosphonate mineralisation within oceanic nutrient cycles. ISME JOURNAL 2018;12:973-980. [PMID: 29339823 DOI: 10.1038/s41396-017-0031-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Revised: 08/25/2017] [Accepted: 11/29/2017] [Indexed: 11/08/2022]
14
McQuillan JS, Robidart JC. Molecular-biological sensing in aquatic environments: recent developments and emerging capabilities. Curr Opin Biotechnol 2017;45:43-50. [DOI: 10.1016/j.copbio.2016.11.022] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Revised: 11/16/2016] [Accepted: 11/25/2016] [Indexed: 11/16/2022]
15
Stuart RK, Bundy R, Buck K, Ghassemain M, Barbeau K, Palenik B. Copper toxicity response influences mesotrophicSynechococcuscommunity structure. Environ Microbiol 2017;19:756-769. [DOI: 10.1111/1462-2920.13630] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2016] [Revised: 11/17/2016] [Accepted: 11/19/2016] [Indexed: 11/28/2022]
16
Su JQ, Cui L, Chen QL, An XL, Zhu YG. Application of genomic technologies to measure and monitor antibiotic resistance in animals. Ann N Y Acad Sci 2016;1388:121-135. [DOI: 10.1111/nyas.13296] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Revised: 10/04/2016] [Accepted: 10/18/2016] [Indexed: 11/27/2022]
17
Burge CA, Friedman CS, Getchell R, House M, Lafferty KD, Mydlarz LD, Prager KC, Sutherland KP, Renault T, Kiryu I, Vega-Thurber R. Complementary approaches to diagnosing marine diseases: a union of the modern and the classic. Philos Trans R Soc Lond B Biol Sci 2016;371:20150207. [PMID: 26880839 PMCID: PMC4760137 DOI: 10.1098/rstb.2015.0207] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/21/2015] [Indexed: 01/01/2023]  Open
18
Shilova IN, Robidart JC, DeLong EF, Zehr JP. Genetic Diversity Affects the Daily Transcriptional Oscillations of Marine Microbial Populations. PLoS One 2016;11:e0146706. [PMID: 26751368 PMCID: PMC4709009 DOI: 10.1371/journal.pone.0146706] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Accepted: 12/21/2015] [Indexed: 11/18/2022]  Open
19
High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats. mBio 2015;6:mBio.02288-14. [PMID: 25626903 PMCID: PMC4324309 DOI: 10.1128/mbio.02288-14] [Citation(s) in RCA: 232] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
20
Johnson ZI, Martiny AC. Techniques for quantifying phytoplankton biodiversity. ANNUAL REVIEW OF MARINE SCIENCE 2015;7:299-324. [PMID: 25251272 DOI: 10.1146/annurev-marine-010814-015902] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
21
Karl DM, Church MJ. Microbial oceanography and the Hawaii Ocean Time-series programme. Nat Rev Microbiol 2014;12:699-713. [PMID: 25157695 DOI: 10.1038/nrmicro3333] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA