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Salisbury JM, Palmer SE. A dynamic scale-mixture model of motion in natural scenes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.19.563101. [PMID: 37961311 PMCID: PMC10634686 DOI: 10.1101/2023.10.19.563101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
Some of the most important tasks of visual and motor systems involve estimating the motion of objects and tracking them over time. Such systems evolved to meet the behavioral needs of the organism in its natural environment, and may therefore be adapted to the statistics of motion it is likely to encounter. By tracking the movement of individual points in movies of natural scenes, we begin to identify common properties of natural motion across scenes. As expected, objects in natural scenes move in a persistent fashion, with velocity correlations lasting hundreds of milliseconds. More subtly, but crucially, we find that the observed velocity distributions are heavy-tailed and can be modeled as a Gaussian scale-mixture. Extending this model to the time domain leads to a dynamic scale-mixture model, consisting of a Gaussian process multiplied by a positive scalar quantity with its own independent dynamics. Dynamic scaling of velocity arises naturally as a consequence of changes in object distance from the observer, and may approximate the effects of changes in other parameters governing the motion in a given scene. This modeling and estimation framework has implications for the neurobiology of sensory and motor systems, which need to cope with these fluctuations in scale in order to represent motion efficiently and drive fast and accurate tracking behavior.
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Szarka G, Ganczer A, Balogh M, Tengölics ÁJ, Futácsi A, Kenyon G, Pan F, Kovács-Öller T, Völgyi B. Gap junctions fine-tune ganglion cell signals to equalize response kinetics within a given electrically coupled array. iScience 2024; 27:110099. [PMID: 38947503 PMCID: PMC11214328 DOI: 10.1016/j.isci.2024.110099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 03/06/2024] [Accepted: 05/22/2024] [Indexed: 07/02/2024] Open
Abstract
Retinal ganglion cells (RGCs) summate inputs and forward a spike train code to the brain in the form of either maintained spiking (sustained) or a quickly decaying brief spike burst (transient). We report diverse response transience values across the RGC population and, contrary to the conventional transient/sustained scheme, responses with intermediary characteristics are the most abundant. Pharmacological tests showed that besides GABAergic inhibition, gap junction (GJ)-mediated excitation also plays a pivotal role in shaping response transience and thus visual coding. More precisely GJs connecting RGCs to nearby amacrine and RGCs play a defining role in the process. These GJs equalize kinetic features, including the response transience of transient OFF alpha (tOFFα) RGCs across a coupled array. We propose that GJs in other coupled neuron ensembles in the brain are also critical in the harmonization of response kinetics to enhance the population code and suit a corresponding task.
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Affiliation(s)
- Gergely Szarka
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
- SzKK Imaging Core Facility, Szentágothai Research Centre, University of Pécs, Pécs, Hungary
| | - Alma Ganczer
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
| | - Márton Balogh
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
| | - Ádám Jonatán Tengölics
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
| | - Anett Futácsi
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
- SzKK Imaging Core Facility, Szentágothai Research Centre, University of Pécs, Pécs, Hungary
| | | | - Feng Pan
- The Hong Kong Polytechnic University, Hong Kong, China
| | - Tamás Kovács-Öller
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
- SzKK Imaging Core Facility, Szentágothai Research Centre, University of Pécs, Pécs, Hungary
| | - Béla Völgyi
- University of Pécs, Szentágothai Research Centre, Pécs, Hungary
- University of Pécs, Department of Neurobiology, Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, Pécs, Hungary
- Center for Neuroscience, University of Pécs, Pécs, Hungary
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D'Angelo JC, Tiruveedhula P, Weber RJ, Arathorn DW, Roorda A. A paradoxical misperception of relative motion. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.04.596708. [PMID: 38895454 PMCID: PMC11185587 DOI: 10.1101/2024.06.04.596708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Motion perception is considered a hyperacuity. The presence of a visual frame of reference to compute relative motion is necessary to achieve this sensitivity [Legge, Gordon E., and F. W. Campbell. "Displacement detection in human vision." Vision Research 21.2 (1981): 205-213.]. However, there is a special condition where humans are unable to accurately detect relative motion: images moving in a direction consistent with retinal slip where the motion is unnaturally amplified can, under some conditions, appear stable [Arathorn, David W., et al. "How the unstable eye sees a stable and moving world." Journal of Vision 13.10.22 (2013)]. In this study, we asked: Is world-fixed retinal image background content necessary for the visual system to compute the direction of eye motion to render in the percept images moving with amplified slip as stable? Or, are non-visual cues sufficient? Subjects adjusted the parameters of a stimulus moving in a random trajectory to match the perceived motion of images moving contingent to the retina. Experiments were done with and without retinal image background content. The perceived motion of stimuli moving with amplified retinal slip was suppressed in the presence of visual content; however, higher magnitudes of motion were perceived under conditions with no visual cues. Our results demonstrate that the presence of retinal image background content is essential for the visual system to compute its direction of motion. The visual content that might be thought to provide a strong frame of reference to detect amplified retinal slips, instead paradoxically drives the misperception of relative motion.
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Affiliation(s)
- Josephine C D'Angelo
- Herbert Wertheim School of Optometry and Vision Science, University of California, Berkeley, CA 94720
| | - Pavan Tiruveedhula
- Herbert Wertheim School of Optometry and Vision Science, University of California, Berkeley, CA 94720
| | - Raymond J Weber
- Electrical and Computer Engineering Department, Montana Sate University, Bozeman, MT 59717-3780
| | - David W Arathorn
- Electrical and Computer Engineering Department, Montana Sate University, Bozeman, MT 59717-3780
| | - Austin Roorda
- Herbert Wertheim School of Optometry and Vision Science, University of California, Berkeley, CA 94720
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Wu Y, Deng W, Li K, Wang X, Liu B, Li J, Chen Z, Zhang Y. A Spiking Artificial Vision Architecture Based on Fully Emulating the Human Vision. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2312094. [PMID: 38320173 DOI: 10.1002/adma.202312094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 01/29/2024] [Indexed: 02/08/2024]
Abstract
Intelligent vision necessitates the deployment of detectors that are always-on and low-power, mirroring the continuous and uninterrupted responsiveness characteristic of human vision. Nonetheless, contemporary artificial vision systems attain this goal by the continuous processing of massive image frames and executing intricate algorithms, thereby expending substantial computational power and energy. In contrast, biological data processing, based on event-triggered spiking, has higher efficiency and lower energy consumption. Here, this work proposes an artificial vision architecture consisting of spiking photodetectors and artificial synapses, closely mirroring the intricacies of the human visual system. Distinct from previously reported techniques, the photodetector is self-powered and event-triggered, outputting light-modulated spiking signals directly, thereby fulfilling the imperative for always-on with low-power consumption. With the spiking signals processing through the integrated synapse units, recognition of graphics, gestures, and human action has been implemented, illustrating the potent image processing capabilities inherent within this architecture. The results prove the 90% accuracy rate in human action recognition within a mere five epochs utilizing a rudimentary artificial neural network. This novel architecture, grounded in spiking photodetectors, offers a viable alternative to the extant models of always-on low-power artificial vision system.
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Affiliation(s)
- Yi Wu
- Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing, 100124, China
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Wenjie Deng
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Kexin Li
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Xiaoting Wang
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Bo Liu
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Jingzhen Li
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Zhijie Chen
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
| | - Yongzhe Zhang
- Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing, 100124, China
- Key Laboratory of Optoelectronics Technology of Education Ministry of China, Faculty of Information Technology, Beijing University of Technology, Beijing, 100124, China
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Swygart D, Yu WQ, Takeuchi S, Wong ROL, Schwartz GW. A presynaptic source drives differing levels of surround suppression in two mouse retinal ganglion cell types. Nat Commun 2024; 15:599. [PMID: 38238324 PMCID: PMC10796971 DOI: 10.1038/s41467-024-44851-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2022] [Accepted: 01/05/2024] [Indexed: 01/22/2024] Open
Abstract
In early sensory systems, cell-type diversity generally increases from the periphery into the brain, resulting in a greater heterogeneity of responses to the same stimuli. Surround suppression is a canonical visual computation that begins within the retina and is found at varying levels across retinal ganglion cell types. Our results show that heterogeneity in the level of surround suppression occurs subcellularly at bipolar cell synapses. Using single-cell electrophysiology and serial block-face scanning electron microscopy, we show that two retinal ganglion cell types exhibit very different levels of surround suppression even though they receive input from the same bipolar cell types. This divergence of the bipolar cell signal occurs through synapse-specific regulation by amacrine cells at the scale of tens of microns. These findings indicate that each synapse of a single bipolar cell can carry a unique visual signal, expanding the number of possible functional channels at the earliest stages of visual processing.
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Affiliation(s)
- David Swygart
- Northwestern University Interdepartmental Neuroscience Program, Chicago, IL, USA
| | - Wan-Qing Yu
- Department of Biological Structure, University of Washington, Seattle, WA, USA
| | - Shunsuke Takeuchi
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Rachel O L Wong
- Department of Biological Structure, University of Washington, Seattle, WA, USA
| | - Gregory W Schwartz
- Northwestern University Interdepartmental Neuroscience Program, Chicago, IL, USA.
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
- Department of Neurobiology, Weinberg College of Arts and Sciences, Northwestern University, Chicago, IL, USA.
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6
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Jo A, Deniz S, Cherian S, Xu J, Futagi D, DeVries SH, Zhu Y. Modular interneuron circuits control motion sensitivity in the mouse retina. Nat Commun 2023; 14:7746. [PMID: 38008788 PMCID: PMC10679153 DOI: 10.1038/s41467-023-43382-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 11/08/2023] [Indexed: 11/28/2023] Open
Abstract
Neural computations arise from highly precise connections between specific types of neurons. Retinal ganglion cells (RGCs) with similar stratification patterns are positioned to receive similar inputs but often display different response properties. In this study, we used intersectional mouse genetics to achieve single-cell type labeling and identified an object motion sensitive (OMS) AC type, COMS-AC(counter-OMS AC). Optogenetic stimulation revealed that COMS-AC makes glycinergic synapses with the OMS-insensitive HD2p-RGC, while chemogenetic inactivation showed that COMS-AC provides inhibitory control to HD2p-RGC during local motion. This local inhibition, combined with the inhibitory drive from TH2-AC during global motion, explains the OMS-insensitive feature of HD2p-RGC. In contrast, COMS-AC fails to make synapses with W3(UHD)-RGC, allowing it to exhibit OMS under the control of VGlut3-AC and TH2-AC. These findings reveal modular interneuron circuits that endow structurally similar RGC types with different responses and present a mechanism for redundancy-reduction in the retina to expand coding capacity.
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Affiliation(s)
- Andrew Jo
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Sercan Deniz
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Suraj Cherian
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Jian Xu
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Daiki Futagi
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Steven H DeVries
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA
| | - Yongling Zhu
- Departments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA.
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Matsumoto A, Yonehara K. Emerging computational motifs: Lessons from the retina. Neurosci Res 2023; 196:11-22. [PMID: 37352934 DOI: 10.1016/j.neures.2023.06.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 06/03/2023] [Accepted: 06/08/2023] [Indexed: 06/25/2023]
Abstract
The retinal neuronal circuit is the first stage of visual processing in the central nervous system. The efforts of scientists over the last few decades indicate that the retina is not merely an array of photosensitive cells, but also a processor that performs various computations. Within a thickness of only ∼200 µm, the retina consists of diverse forms of neuronal circuits, each of which encodes different visual features. Since the discovery of direction-selective cells by Horace Barlow and Richard Hill, the mechanisms that generate direction selectivity in the retina have remained a fascinating research topic. This review provides an overview of recent advances in our understanding of direction-selectivity circuits. Beyond the conventional wisdom of direction selectivity, emerging findings indicate that the retina utilizes complicated and sophisticated mechanisms in which excitatory and inhibitory pathways are involved in the efficient encoding of motion information. As will become evident, the discovery of computational motifs in the retina facilitates an understanding of how sensory systems establish feature selectivity.
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Affiliation(s)
- Akihiro Matsumoto
- Danish Research Institute of Translational Neuroscience - DANDRITE, Nordic-EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, Aarhus, Denmark; Department of Gene Function and Phenomics, National Institute of Genetics, Mishima, Japan; Department of Genetics, The Graduate University for Advanced Studies (SOKENDAI), Mishima, Japan.
| | - Keisuke Yonehara
- Danish Research Institute of Translational Neuroscience - DANDRITE, Nordic-EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, Aarhus, Denmark; Department of Gene Function and Phenomics, National Institute of Genetics, Mishima, Japan; Department of Genetics, The Graduate University for Advanced Studies (SOKENDAI), Mishima, Japan
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8
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Huang PY, Jiang BY, Chen HJ, Xu JY, Wang K, Zhu CY, Hu XY, Li D, Zhen L, Zhou FC, Qin JK, Xu CY. Neuro-inspired optical sensor array for high-accuracy static image recognition and dynamic trace extraction. Nat Commun 2023; 14:6736. [PMID: 37872169 PMCID: PMC10593955 DOI: 10.1038/s41467-023-42488-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 10/12/2023] [Indexed: 10/25/2023] Open
Abstract
Neuro-inspired vision systems hold great promise to address the growing demands of mass data processing for edge computing, a distributed framework that brings computation and data storage closer to the sources of data. In addition to the capability of static image sensing and processing, the hardware implementation of a neuro-inspired vision system also requires the fulfilment of detecting and recognizing moving targets. Here, we demonstrated a neuro-inspired optical sensor based on two-dimensional NbS2/MoS2 hybrid films, which featured remarkable photo-induced conductance plasticity and low electrical energy consumption. A neuro-inspired optical sensor array with 10 × 10 NbS2/MoS2 phototransistors enabled highly integrated functions of sensing, memory, and contrast enhancement capabilities for static images, which benefits convolutional neural network (CNN) with a high image recognition accuracy. More importantly, in-sensor trajectory registration of moving light spots was experimentally implemented such that the post-processing could yield a high restoration accuracy. Our neuro-inspired optical sensor array could provide a fascinating platform for the implementation of high-performance artificial vision systems.
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Affiliation(s)
- Pei-Yu Huang
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China
| | - Bi-Yi Jiang
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, 518055, China
- Department of Applied Physics, The Hong Kong Polytechnic University, Hong Kong, 999077, China
| | - Hong-Ji Chen
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China
| | - Jia-Yi Xu
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, 518055, China
| | - Kang Wang
- Key Laboratory of MEMS of the Ministry of Education, Southeast University, Nanjing, 210096, China
| | - Cheng-Yi Zhu
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China
| | - Xin-Yan Hu
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, 518055, China
| | - Dong Li
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China
| | - Liang Zhen
- MOE Key Laboratory of Micro-Systems and Micro-Structures Manufacturing, Harbin Institute of Technology, Harbin, 150080, China
| | - Fei-Chi Zhou
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, 518055, China.
| | - Jing-Kai Qin
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
| | - Cheng-Yan Xu
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
- MOE Key Laboratory of Micro-Systems and Micro-Structures Manufacturing, Harbin Institute of Technology, Harbin, 150080, China.
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Poletti M. An eye for detail: Eye movements and attention at the foveal scale. Vision Res 2023; 211:108277. [PMID: 37379763 PMCID: PMC10528557 DOI: 10.1016/j.visres.2023.108277] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 06/08/2023] [Accepted: 06/08/2023] [Indexed: 06/30/2023]
Abstract
Human vision relies on a tiny region of the retina, the 1-deg foveola, to achieve high spatial resolution. Foveal vision is of paramount importance in daily activities, yet its study is challenging, as eye movements incessantly displace stimuli across this region. Here I will review work that, building on recent advances in eye-tracking and gaze-contingent display, examines how attention and eye movements operate at the foveal level. This research highlights how exploration of fine spatial detail unfolds following visuomotor strategies reminiscent of those occurring at larger scales. It shows that, together with highly precise control of attention, this motor activity is linked to non-homogenous processing within the foveola and selectively modulates sensitivity both in space and time. Overall, the picture emerges of a highly dynamic foveal perception in which fine spatial vision, rather than simply being the result of placing a stimulus at the center of gaze, is the result of a finely tuned and orchestrated synergy of motor, cognitive, and attentional processes.
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Affiliation(s)
- Martina Poletti
- Department of Brain and Cognitive Sciences, University of Rochester, United States; Center for Visual Science, University of Rochester, United States; Department of Neuroscience, University of Rochester, United States.
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10
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Dong X, Chen C, Pan K, Li Y, Zhang Z, He Z, Liu B, Zhou Z, Wu Y, Zhang D, Sun H, Qian X, Xu M, Huang W, Liu J. Nearly Panoramic Neuromorphic Vision with Transparent Photosynapses. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2023; 10:e2303944. [PMID: 37635198 PMCID: PMC10602561 DOI: 10.1002/advs.202303944] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 07/25/2023] [Indexed: 08/29/2023]
Abstract
Neuromorphic vision based on photonic synapses has the ability to mimic sensitivity, adaptivity, and sophistication of bio-visual systems. Significant advances in artificial photosynapses are achieved recently. However, conventional photosyanptic devices normally employ opaque metal conductors and vertical device configuration, performing a limited hemispherical field of view. Here, a transparent planar photonic synapse (TPPS) is presented that offers dual-side photosensitive capability for nearly panoramic neuromorphic vision. The TPPS consisting of all two dimensional (2D) carbon-based derivatives exhibits ultra-broadband photodetecting (365-970 nm) and ≈360° omnidirectional viewing angle. With its intrinsic persistent photoconductivity effect, the detector possesses bio-synaptic behaviors such as short/long-term memory, experience learning, light adaptation, and a 171% pair-pulse-facilitation index, enabling the synapse array to achieve image recognition enhancement (92%) and moving object detection.
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Affiliation(s)
- Xuemei Dong
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Chen Chen
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Keyuan Pan
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Yinxiang Li
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Zicheng Zhang
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Zixi He
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Bin Liu
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Zhe Zhou
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Yueyue Wu
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Dengfeng Zhang
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Hongchao Sun
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Xinkai Qian
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Min Xu
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
| | - Wei Huang
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
- Frontiers Science Center for Flexible ElectronicsXi'an Institute of Flexible Electronics (IFE) and Xi'an Institute of Biomedical Materials & EngineeringNorthwestern Polytechnical UniversityXi'an710072China
| | - Juqing Liu
- Key Laboratory of Flexible Electronics (KLOFE) and Institute of Advanced Materials (IAM)Nanjing Tech University (Nanjing Tech)30 South Puzhu RoadNanjing211816China
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11
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Maheswaranathan N, McIntosh LT, Tanaka H, Grant S, Kastner DB, Melander JB, Nayebi A, Brezovec LE, Wang JH, Ganguli S, Baccus SA. Interpreting the retinal neural code for natural scenes: From computations to neurons. Neuron 2023; 111:2742-2755.e4. [PMID: 37451264 PMCID: PMC10680974 DOI: 10.1016/j.neuron.2023.06.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 01/30/2023] [Accepted: 06/14/2023] [Indexed: 07/18/2023]
Abstract
Understanding the circuit mechanisms of the visual code for natural scenes is a central goal of sensory neuroscience. We show that a three-layer network model predicts retinal natural scene responses with an accuracy nearing experimental limits. The model's internal structure is interpretable, as interneurons recorded separately and not modeled directly are highly correlated with model interneurons. Models fitted only to natural scenes reproduce a diverse set of phenomena related to motion encoding, adaptation, and predictive coding, establishing their ethological relevance to natural visual computation. A new approach decomposes the computations of model ganglion cells into the contributions of model interneurons, allowing automatic generation of new hypotheses for how interneurons with different spatiotemporal responses are combined to generate retinal computations, including predictive phenomena currently lacking an explanation. Our results demonstrate a unified and general approach to study the circuit mechanisms of ethological retinal computations under natural visual scenes.
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Affiliation(s)
| | - Lane T McIntosh
- Neuroscience Program, Stanford University School of Medicine, Stanford, CA, USA
| | - Hidenori Tanaka
- Department of Applied Physics, Stanford University, Stanford, CA, USA; Physics & Informatics Laboratories, NTT Research, Inc., Sunnyvale, CA, USA; Center for Brain Science, Harvard University, Cambridge, MA, USA
| | - Satchel Grant
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - David B Kastner
- Neuroscience Program, Stanford University School of Medicine, Stanford, CA, USA
| | - Joshua B Melander
- Neuroscience Program, Stanford University School of Medicine, Stanford, CA, USA
| | - Aran Nayebi
- Neuroscience Program, Stanford University School of Medicine, Stanford, CA, USA
| | - Luke E Brezovec
- Neuroscience Program, Stanford University School of Medicine, Stanford, CA, USA
| | | | - Surya Ganguli
- Department of Applied Physics, Stanford University, Stanford, CA, USA
| | - Stephen A Baccus
- Department of Neurobiology, Stanford University, Stanford, CA, USA.
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12
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Wang Q, So C, Zuo B, Banerjee S, Qiu C, Ting Z, Cheong AMY, Tse DYY, Pan F. Retinal ganglion cells encode differently in the myopic mouse retina? Exp Eye Res 2023; 234:109616. [PMID: 37580002 DOI: 10.1016/j.exer.2023.109616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Revised: 08/06/2023] [Accepted: 08/11/2023] [Indexed: 08/16/2023]
Abstract
The etiology of myopia remains unclear. This study investigated whether retinal ganglion cells (RGCs) in the myopic retina encode visual information differently from the normal retina and to determine the role of Connexin (Cx) 36 in this process. Generalized linear models (GLMs), which can capture stimulus-dependent changes in real neurons with spike timing precision and reliability, were used to predict RGCs responses to focused and defocused images in the retinas of wild-type (normal) and Lens-Induced Myopia (LIM) mice. As the predominant subunit of gap junctions in the mouse retina and a plausible modulator in myopia development, Cx36 knockout (KO) mice were used as a control for an intact retinal circuit. The kinetics of excitatory postsynaptic currents (EPSCs) of a single αRGC could reflect projection of both focused and defocused images in the retinas of normal and LIM, but not in the Cx36 knockout mice. Poisson GLMs revealed that RGC encoding of visual stimuli in the LIM retina was similar to that of the normal retina. In the LIM retinas, the linear-Gaussian GLM model with offset was a better fit for predicting the spike count under a focused image than the defocused image. Akaike information criterion (AIC) indicated that nonparametric GLM (np-GLM) model predicted focused/defocused images better in both LIM and normal retinas. However, the spike counts in 33% of αRGCs in LIM retinas were better fitted by exponential GLM (exp-GLM) under defocus, compared to only 13% αRGCs in normal retinas. The differences in encoding performance between LIM and normal retinas indicated the possible amendment and plasticity of the retinal circuit in myopic retinas. The absence of a similar response between Cx36 KO mice and normal/LIM mice might suggest that Cx36, which is associated with myopia development, plays a role in encoding focused and defocused images.
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Affiliation(s)
- Qin Wang
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong; Centre for Eye and Vision Research (CEVR), 17W Hong Kong Science Park, Hong Kong
| | - Chunghim So
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong
| | - Bing Zuo
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong
| | - Seema Banerjee
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong
| | - ChunTing Qiu
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong
| | - Zhang Ting
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong; Centre for Eye and Vision Research (CEVR), 17W Hong Kong Science Park, Hong Kong; Hong Kong Polytechnic University Shenzhen Research Institute, Hong Kong
| | - Allen Ming-Yan Cheong
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong; Centre for Eye and Vision Research (CEVR), 17W Hong Kong Science Park, Hong Kong
| | - Dennis Yan-Yin Tse
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong; Centre for Eye and Vision Research (CEVR), 17W Hong Kong Science Park, Hong Kong
| | - Feng Pan
- School of Optometry, The Hong Kong Polytechnic University, Kowloon, Hong Kong; Centre for Eye and Vision Research (CEVR), 17W Hong Kong Science Park, Hong Kong; Research Centre for SHARP Vision (RCSV), The Hong Kong Polytechnic University, Hong Kong; Hong Kong Polytechnic University Shenzhen Research Institute, Hong Kong.
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13
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Hoshal BD, Holmes CM, Bojanek K, Salisbury J, Berry MJ, Marre O, Palmer SE. Stimulus invariant aspects of the retinal code drive discriminability of natural scenes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.08.552526. [PMID: 37609259 PMCID: PMC10441377 DOI: 10.1101/2023.08.08.552526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/24/2023]
Abstract
Everything that the brain sees must first be encoded by the retina, which maintains a reliable representation of the visual world in many different, complex natural scenes while also adapting to stimulus changes. Decomposing the population code into independent and cell-cell interactions reveals how broad scene structure is encoded in the adapted retinal output. By recording from the same retina while presenting many different natural movies, we see that the population structure, characterized by strong interactions, is consistent across both natural and synthetic stimuli. We show that these interactions contribute to encoding scene identity. We also demonstrate that this structure likely arises in part from shared bipolar cell input as well as from gap junctions between retinal ganglion cells and amacrine cells.
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Affiliation(s)
- Benjamin D Hoshal
- Committee on Computational Neuroscience, University of Chicago, Chicago, Illinois 60637, USA
| | - Caroline M Holmes
- Department of Physics, Princeton University, Princeton, New Jersey, 08540
| | - Kyle Bojanek
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, Illinois 60637, USA
| | - Jared Salisbury
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, Illinois 60637, USA
| | - Michael J Berry
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ 08544
| | - Olivier Marre
- Institut de la Vision, Sorbonne Université, INSERM, CNRS, Paris, France
| | - Stephanie E Palmer
- Department of Organismal Biology and Anatomy and Department of Physics, University of Chicago, Chicago, Illinois 60637, USA Center for the Physics of Biological Function, Princeton University, Princeton, New Jersey 08544, USA
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14
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Palanker D. Electronic Retinal Prostheses. Cold Spring Harb Perspect Med 2023; 13:a041525. [PMID: 36781222 PMCID: PMC10411866 DOI: 10.1101/cshperspect.a041525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2023]
Abstract
Retinal prostheses are a promising means for restoring sight to patients blinded by photoreceptor atrophy. They introduce visual information by electrical stimulation of the surviving inner retinal neurons. Subretinal implants target the graded-response secondary neurons, primarily the bipolar cells, which then transfer the information to the ganglion cells via the retinal neural network. Therefore, many features of natural retinal signal processing can be preserved in this approach if the inner retinal network is retained. Epiretinal implants stimulate primarily the ganglion cells, and hence should encode the visual information in spiking patterns, which, ideally, should match the target cell types. Currently, subretinal arrays are being developed primarily for restoration of central vision in patients impaired by age-related macular degeneration (AMD), while epiretinal implants-for patients blinded by retinitis pigmentosa, where the inner retina is less preserved. This review describes the concepts and technologies, preclinical characterization of prosthetic vision and clinical outcomes, and provides a glimpse into future developments.
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Affiliation(s)
- Daniel Palanker
- Department of Ophthalmology and Hansen Experimental Physics Laboratory, Stanford University, Stanford, California 94305, USA
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15
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Paşcalău R, Badea TC. Signaling - transcription interactions in mouse retinal ganglion cells early axon pathfinding -a literature review. FRONTIERS IN OPHTHALMOLOGY 2023; 3:1180142. [PMID: 38983012 PMCID: PMC11182120 DOI: 10.3389/fopht.2023.1180142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2023] [Accepted: 04/21/2023] [Indexed: 07/11/2024]
Abstract
Sending an axon out of the eye and into the target brain nuclei is the defining feature of retinal ganglion cells (RGCs). The literature on RGC axon pathfinding is vast, but it focuses mostly on decision making events such as midline crossing at the optic chiasm or retinotopic mapping at the target nuclei. In comparison, the exit of RGC axons out of the eye is much less explored. The first checkpoint on the RGC axons' path is the optic cup - optic stalk junction (OC-OS). OC-OS development and the exit of the RGC pioneer axons out of the eye are coordinated spatially and temporally. By the time the optic nerve head domain is specified, the optic fissure margins are in contact and the fusion process is ongoing, the first RGCs are born in its proximity and send pioneer axons in the optic stalk. RGC differentiation continues in centrifugal waves. Later born RGC axons fasciculate with the more mature axons. Growth cones at the end of the axons respond to guidance cues to adopt a centripetal direction, maintain nerve fiber layer restriction and to leave the optic cup. Although there is extensive information on OC-OS development, we still have important unanswered questions regarding its contribution to the exit of the RGC axons out of the eye. We are still to distinguish the morphogens of the OC-OS from the axon guidance molecules which are expressed in the same place at the same time. The early RGC transcription programs responsible for axon emergence and pathfinding are also unknown. This review summarizes the molecular mechanisms for early RGC axon guidance by contextualizing mouse knock-out studies on OC-OS development with the recent transcriptomic studies on developing RGCs in an attempt to contribute to the understanding of human optic nerve developmental anomalies. The published data summarized here suggests that the developing optic nerve head provides a physical channel (the closing optic fissure) as well as molecular guidance cues for the pioneer RGC axons to exit the eye.
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Affiliation(s)
- Raluca Paşcalău
- Research and Development Institute, Transilvania University of Braşov, Braşov, Romania
- Ophthalmology Clinic, Cluj County Emergency Hospital, Cluj-Napoca, Romania
| | - Tudor Constantin Badea
- Research and Development Institute, Transilvania University of Braşov, Braşov, Romania
- National Center for Brain Research, Institutul de Cercetări pentru Inteligență Artificială, Romanian Academy, Bucharest, Romania
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16
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Zhao ZD, Zhang L, Xiang X, Kim D, Li H, Cao P, Shen WL. Neurocircuitry of Predatory Hunting. Neurosci Bull 2023; 39:817-831. [PMID: 36705845 PMCID: PMC10170020 DOI: 10.1007/s12264-022-01018-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 11/26/2022] [Indexed: 01/28/2023] Open
Abstract
Predatory hunting is an important type of innate behavior evolutionarily conserved across the animal kingdom. It is typically composed of a set of sequential actions, including prey search, pursuit, attack, and consumption. This behavior is subject to control by the nervous system. Early studies used toads as a model to probe the neuroethology of hunting, which led to the proposal of a sensory-triggered release mechanism for hunting actions. More recent studies have used genetically-trackable zebrafish and rodents and have made breakthrough discoveries in the neuroethology and neurocircuits underlying this behavior. Here, we review the sophisticated neurocircuitry involved in hunting and summarize the detailed mechanism for the circuitry to encode various aspects of hunting neuroethology, including sensory processing, sensorimotor transformation, motivation, and sequential encoding of hunting actions. We also discuss the overlapping brain circuits for hunting and feeding and point out the limitations of current studies. We propose that hunting is an ideal behavioral paradigm in which to study the neuroethology of motivated behaviors, which may shed new light on epidemic disorders, including binge-eating, obesity, and obsessive-compulsive disorders.
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Affiliation(s)
- Zheng-Dong Zhao
- School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China
- Boston Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA
| | - Li Zhang
- National Institute of Biological Sciences (NIBS), Beijing, 102206, China
| | - Xinkuan Xiang
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan, 430074, China
- MoE Key Laboratory for Biomedical Photonics, Collaborative Innovation Center for Biomedical Engineering, School of Engineering Sciences, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Daesoo Kim
- Department of Cognitive Brain Science, Korea Advanced Institute of Science & Technology, Daejeon, 34141, South Korea.
| | - Haohong Li
- MOE Frontier Research Center of Brain & Brain-machine Integration, School of Brain Science and Brain Medicine, Zhejiang University, Hangzhou, 310058, China.
- Affiliated Mental Health Centre and Hangzhou Seventh People`s Hospital, Zhejiang University School of Medicine, Hangzhou, 310013, China.
| | - Peng Cao
- National Institute of Biological Sciences (NIBS), Beijing, 102206, China.
| | - Wei L Shen
- School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
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17
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Luongo FJ, Liu L, Ho CLA, Hesse JK, Wekselblatt JB, Lanfranchi FF, Huber D, Tsao DY. Mice and primates use distinct strategies for visual segmentation. eLife 2023; 12:74394. [PMID: 36790170 PMCID: PMC9981152 DOI: 10.7554/elife.74394] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Accepted: 01/22/2023] [Indexed: 02/16/2023] Open
Abstract
The rodent visual system has attracted great interest in recent years due to its experimental tractability, but the fundamental mechanisms used by the mouse to represent the visual world remain unclear. In the primate, researchers have argued from both behavioral and neural evidence that a key step in visual representation is 'figure-ground segmentation', the delineation of figures as distinct from backgrounds. To determine if mice also show behavioral and neural signatures of figure-ground segmentation, we trained mice on a figure-ground segmentation task where figures were defined by gratings and naturalistic textures moving counterphase to the background. Unlike primates, mice were severely limited in their ability to segment figure from ground using the opponent motion cue, with segmentation behavior strongly dependent on the specific carrier pattern. Remarkably, when mice were forced to localize naturalistic patterns defined by opponent motion, they adopted a strategy of brute force memorization of texture patterns. In contrast, primates, including humans, macaques, and mouse lemurs, could readily segment figures independent of carrier pattern using the opponent motion cue. Consistent with mouse behavior, neural responses to the same stimuli recorded in mouse visual areas V1, RL, and LM also did not support texture-invariant segmentation of figures using opponent motion. Modeling revealed that the texture dependence of both the mouse's behavior and neural responses could be explained by a feedforward neural network lacking explicit segmentation capabilities. These findings reveal a fundamental limitation in the ability of mice to segment visual objects compared to primates.
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Affiliation(s)
- Francisco J Luongo
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
| | - Lu Liu
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
| | - Chun Lum Andy Ho
- Department of Basic Neurosciences, University of GenevaGenevaSwitzerland
| | - Janis K Hesse
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
- Computation and Neural Systems, California Institute of TechnologyPasadenaUnited States
- University of California, BerkeleyBerkeleyUnited States
| | - Joseph B Wekselblatt
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
| | - Frank F Lanfranchi
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
- Computation and Neural Systems, California Institute of TechnologyPasadenaUnited States
- University of California, BerkeleyBerkeleyUnited States
| | - Daniel Huber
- Department of Basic Neurosciences, University of GenevaGenevaSwitzerland
| | - Doris Y Tsao
- University of California, BerkeleyBerkeleyUnited States
- Howard Hughes Medical InstituteBerkeleyUnited States
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18
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Turner MH, Krieger A, Pang MM, Clandinin TR. Visual and motor signatures of locomotion dynamically shape a population code for feature detection in Drosophila. eLife 2022; 11:e82587. [PMID: 36300621 PMCID: PMC9651947 DOI: 10.7554/elife.82587] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 10/25/2022] [Indexed: 01/07/2023] Open
Abstract
Natural vision is dynamic: as an animal moves, its visual input changes dramatically. How can the visual system reliably extract local features from an input dominated by self-generated signals? In Drosophila, diverse local visual features are represented by a group of projection neurons with distinct tuning properties. Here, we describe a connectome-based volumetric imaging strategy to measure visually evoked neural activity across this population. We show that local visual features are jointly represented across the population, and a shared gain factor improves trial-to-trial coding fidelity. A subset of these neurons, tuned to small objects, is modulated by two independent signals associated with self-movement, a motor-related signal, and a visual motion signal associated with rotation of the animal. These two inputs adjust the sensitivity of these feature detectors across the locomotor cycle, selectively reducing their gain during saccades and restoring it during intersaccadic intervals. This work reveals a strategy for reliable feature detection during locomotion.
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Affiliation(s)
- Maxwell H Turner
- Department of Neurobiology, Stanford UniversityStanfordUnited States
| | - Avery Krieger
- Department of Neurobiology, Stanford UniversityStanfordUnited States
| | - Michelle M Pang
- Department of Neurobiology, Stanford UniversityStanfordUnited States
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19
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Chen Y, Chen X, Baserdem B, Zhan H, Li Y, Davis MB, Kebschull JM, Zador AM, Koulakov AA, Albeanu DF. High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. Cell 2022; 185:4117-4134.e28. [PMID: 36306734 PMCID: PMC9681627 DOI: 10.1016/j.cell.2022.09.038] [Citation(s) in RCA: 31] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 07/22/2022] [Accepted: 09/28/2022] [Indexed: 11/07/2022]
Abstract
In most sensory modalities, neuronal connectivity reflects behaviorally relevant stimulus features, such as spatial location, orientation, and sound frequency. By contrast, the prevailing view in the olfactory cortex, based on the reconstruction of dozens of neurons, is that connectivity is random. Here, we used high-throughput sequencing-based neuroanatomical techniques to analyze the projections of 5,309 mouse olfactory bulb and 30,433 piriform cortex output neurons at single-cell resolution. Surprisingly, statistical analysis of this much larger dataset revealed that the olfactory cortex connectivity is spatially structured. Single olfactory bulb neurons targeting a particular location along the anterior-posterior axis of piriform cortex also project to matched, functionally distinct, extra-piriform targets. Moreover, single neurons from the targeted piriform locus also project to the same matched extra-piriform targets, forming triadic circuit motifs. Thus, as in other sensory modalities, olfactory information is routed at early stages of processing to functionally diverse targets in a coordinated manner.
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Affiliation(s)
- Yushu Chen
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | - Xiaoyin Chen
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | | | - Huiqing Zhan
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | - Yan Li
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | - Martin B Davis
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | | | - Anthony M Zador
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
| | | | - Dinu F Albeanu
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
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20
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Gaynes JA, Budoff SA, Grybko MJ, Hunt JB, Poleg-Polsky A. Classical center-surround receptive fields facilitate novel object detection in retinal bipolar cells. Nat Commun 2022; 13:5575. [PMID: 36163249 PMCID: PMC9512824 DOI: 10.1038/s41467-022-32761-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 08/16/2022] [Indexed: 11/11/2022] Open
Abstract
Antagonistic interactions between center and surround receptive field (RF) components lie at the heart of the computations performed in the visual system. Circularly symmetric center-surround RFs are thought to enhance responses to spatial contrasts (i.e., edges), but how visual edges affect motion processing is unclear. Here, we addressed this question in retinal bipolar cells, the first visual neuron with classic center-surround interactions. We found that bipolar glutamate release emphasizes objects that emerge in the RF; their responses to continuous motion are smaller, slower, and cannot be predicted by signals elicited by stationary stimuli. In our hands, the alteration in signal dynamics induced by novel objects was more pronounced than edge enhancement and could be explained by priming of RF surround during continuous motion. These findings echo the salience of human visual perception and demonstrate an unappreciated capacity of the center-surround architecture to facilitate novel object detection and dynamic signal representation. Center-surround receptive fields are typically considered to mediate edge detection. Here, by studying retinal bipolar cells responding to flashed and moving stimuli, the authors reveal an additional function: enhanced representation of newly appearing visual items.
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Affiliation(s)
- John A Gaynes
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO, USA
| | - Samuel A Budoff
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO, USA
| | - Michael J Grybko
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO, USA
| | - Joshua B Hunt
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO, USA
| | - Alon Poleg-Polsky
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO, USA.
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21
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Strauss S, Korympidou MM, Ran Y, Franke K, Schubert T, Baden T, Berens P, Euler T, Vlasits AL. Center-surround interactions underlie bipolar cell motion sensitivity in the mouse retina. Nat Commun 2022; 13:5574. [PMID: 36163124 PMCID: PMC9513071 DOI: 10.1038/s41467-022-32762-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 08/16/2022] [Indexed: 11/09/2022] Open
Abstract
Motion sensing is a critical aspect of vision. We studied the representation of motion in mouse retinal bipolar cells and found that some bipolar cells are radially direction selective, preferring the origin of small object motion trajectories. Using a glutamate sensor, we directly observed bipolar cells synaptic output and found that there are radial direction selective and non-selective bipolar cell types, the majority being selective, and that radial direction selectivity relies on properties of the center-surround receptive field. We used these bipolar cell receptive fields along with connectomics to design biophysical models of downstream cells. The models and additional experiments demonstrated that bipolar cells pass radial direction selective excitation to starburst amacrine cells, which contributes to their directional tuning. As bipolar cells provide excitation to most amacrine and ganglion cells, their radial direction selectivity may contribute to motion processing throughout the visual system.
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Affiliation(s)
- Sarah Strauss
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
- Tübingen AI Center, University of Tübingen, Tübingen, Germany
| | - Maria M Korympidou
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Yanli Ran
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Katrin Franke
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Tom Baden
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- School of Life Sciences, University of Sussex, Brighton, UK
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
- Tübingen AI Center, University of Tübingen, Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
| | - Anna L Vlasits
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
- Department of Neurobiology, Northwestern University, Evanston, IL, USA.
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22
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Suppression without inhibition: how retinal computation contributes to saccadic suppression. Commun Biol 2022; 5:692. [PMID: 35821404 PMCID: PMC9276698 DOI: 10.1038/s42003-022-03526-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Accepted: 05/23/2022] [Indexed: 11/08/2022] Open
Abstract
Visual perception remains stable across saccadic eye movements, despite the concurrent strongly disruptive visual flow. This stability is partially associated with a reduction in visual sensitivity, known as saccadic suppression, which already starts in the retina with reduced ganglion cell sensitivity. However, the retinal circuit mechanisms giving rise to such suppression remain unknown. Here, we describe these mechanisms using electrophysiology in mouse, pig, and macaque retina, 2-photon calcium imaging, computational modeling, and human psychophysics. We find that sequential stimuli, like those that naturally occur during saccades, trigger three independent suppressive mechanisms in the retina. The main mechanism is triggered by contrast-reversing sequential stimuli and originates within the receptive field center of ganglion cells. It does not involve inhibition or other known suppressive mechanisms like saturation or adaptation. Instead, it relies on temporal filtering of the inherently slow response of cone photoreceptors coupled with downstream nonlinearities. Two further mechanisms of suppression are present predominantly in ON ganglion cells and originate in the receptive field surround, highlighting another disparity between ON and OFF ganglion cells. The mechanisms uncovered here likely play a role in shaping the retinal output following eye movements and other natural viewing conditions where sequential stimulation is ubiquitous.
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23
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Brombas A, Zhou X, Williams SR. Light-evoked dendritic spikes in sustained but not transient rabbit retinal ganglion cells. Neuron 2022; 110:2802-2814.e3. [PMID: 35803269 DOI: 10.1016/j.neuron.2022.06.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 04/27/2022] [Accepted: 06/07/2022] [Indexed: 10/17/2022]
Abstract
Dendritic computations have a central role in neuronal function, but it is unknown how cell-class heterogeneity of dendritic electrical excitability shapes physiologically engaged neuronal and circuit computations. To address this, we examined dendritic integration in closely related classes of retinal ganglion cells (GCs) using simultaneous somato-dendritic electrical recording techniques in a functionally intact circuit. Simultaneous recordings revealed sustained OFF-GCs generated powerful dendritic spikes in response to visual input that drove action potential firing. In contrast, the dendrites of transient OFF-GCs were passive and did not generate dendritic spikes. Dendritic spike generation allowed sustained, but not transient, OFF-GCs to signal into action potential output the local motion of visual stimuli to produce a continuous wave of action potential firing in adjacent cells as images moved across the retina. Conversely, this representation was highly fragmented in transient OFF-GCs. Thus, a heterogeneity of dendritic excitability defines the computations executed by classes of GCs.
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Affiliation(s)
- Arne Brombas
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Xiangyu Zhou
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Stephen R Williams
- Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
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24
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Abstract
An ultimate goal in retina science is to understand how the neural circuit of the retina processes natural visual scenes. Yet most studies in laboratories have long been performed with simple, artificial visual stimuli such as full-field illumination, spots of light, or gratings. The underlying assumption is that the features of the retina thus identified carry over to the more complex scenario of natural scenes. As the application of corresponding natural settings is becoming more commonplace in experimental investigations, this assumption is being put to the test and opportunities arise to discover processing features that are triggered by specific aspects of natural scenes. Here, we review how natural stimuli have been used to probe, refine, and complement knowledge accumulated under simplified stimuli, and we discuss challenges and opportunities along the way toward a comprehensive understanding of the encoding of natural scenes. Expected final online publication date for the Annual Review of Vision Science, Volume 8 is September 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Dimokratis Karamanlis
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany.,International Max Planck Research School for Neurosciences, Göttingen, Germany
| | - Helene Marianne Schreyer
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
| | - Tim Gollisch
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany.,Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany
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25
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Kim S, Roh H, Im M. Artificial Visual Information Produced by Retinal Prostheses. Front Cell Neurosci 2022; 16:911754. [PMID: 35734216 PMCID: PMC9208577 DOI: 10.3389/fncel.2022.911754] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Accepted: 05/18/2022] [Indexed: 11/18/2022] Open
Abstract
Numerous retinal prosthetic systems have demonstrated somewhat useful vision can be restored to individuals who had lost their sight due to outer retinal degenerative diseases. Earlier prosthetic studies have mostly focused on the confinement of electrical stimulation for improved spatial resolution and/or the biased stimulation of specific retinal ganglion cell (RGC) types for selective activation of retinal ON/OFF pathway for enhanced visual percepts. To better replicate normal vision, it would be also crucial to consider information transmission by spiking activities arising in the RGC population since an incredible amount of visual information is transferred from the eye to the brain. In previous studies, however, it has not been well explored how much artificial visual information is created in response to electrical stimuli delivered by microelectrodes. In the present work, we discuss the importance of the neural information for high-quality artificial vision. First, we summarize the previous literatures which have computed information transmission rates from spiking activities of RGCs in response to visual stimuli. Second, we exemplify a couple of studies which computed the neural information from electrically evoked responses. Third, we briefly introduce how information rates can be computed in the representative two ways – direct method and reconstruction method. Fourth, we introduce in silico approaches modeling artificial retinal neural networks to explore the relationship between amount of information and the spiking patterns. Lastly, we conclude our review with clinical implications to emphasize the necessity of considering visual information transmission for further improvement of retinal prosthetics.
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Affiliation(s)
- Sein Kim
- Brain Science Institute, Korea Institute of Science and Technology, Seoul, South Korea
| | - Hyeonhee Roh
- Brain Science Institute, Korea Institute of Science and Technology, Seoul, South Korea
- School of Electrical Engineering, College of Engineering, Korea University, Seoul, South Korea
| | - Maesoon Im
- Brain Science Institute, Korea Institute of Science and Technology, Seoul, South Korea
- Division of Bio-Medical Science & Technology, KIST School, University of Science and Technology, Seoul, South Korea
- *Correspondence: Maesoon Im, ,
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26
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Huang X, Qiao H, Li H, Jiang Z. Bioinspired approach-sensitive neural network for collision detection in cluttered and dynamic backgrounds. Appl Soft Comput 2022. [DOI: 10.1016/j.asoc.2022.108782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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27
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Neural mechanisms to exploit positional geometry for collision avoidance. Curr Biol 2022; 32:2357-2374.e6. [PMID: 35508172 DOI: 10.1016/j.cub.2022.04.023] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2022] [Revised: 03/21/2022] [Accepted: 04/08/2022] [Indexed: 11/21/2022]
Abstract
Visual motion provides rich geometrical cues about the three-dimensional configuration of the world. However, how brains decode the spatial information carried by motion signals remains poorly understood. Here, we study a collision-avoidance behavior in Drosophila as a simple model of motion-based spatial vision. With simulations and psychophysics, we demonstrate that walking Drosophila exhibit a pattern of slowing to avoid collisions by exploiting the geometry of positional changes of objects on near-collision courses. This behavior requires the visual neuron LPLC1, whose tuning mirrors the behavior and whose activity drives slowing. LPLC1 pools inputs from object and motion detectors, and spatially biased inhibition tunes it to the geometry of collisions. Connectomic analyses identified circuitry downstream of LPLC1 that faithfully inherits its response properties. Overall, our results reveal how a small neural circuit solves a specific spatial vision task by combining distinct visual features to exploit universal geometrical constraints of the visual world.
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28
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Carli G, Farabollini F. Neural circuits of fear and defensive behavior. PROGRESS IN BRAIN RESEARCH 2022; 271:51-69. [PMID: 35397895 DOI: 10.1016/bs.pbr.2022.02.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Innate fear-related behavioral responses have evolved as strategies for survival. The neural circuits responsible for defensive responses, studied mainly in rodents, have been substantially preserved across evolution. Amygdala collects sensory information (visual, auditory and olfactory) in the cortical division and conveys it to the striatal output division. Distinct amygdala nuclei/subnuclei are activated by different fearful stimuli, such as exposure to a predator or to an aggressive conspecific. The same stimuli segregation is observed in downstream structures, i.e., hypothalamus and PAG. In guinea pigs, the circuits underlying Tonic Immobility (TI) and freezing in response to a natural predator, have been mapped in different subnuclei of the same amygdala area. In the PAG circuits, defensive responses are differentially represented along the dorso-ventral and rostro-caudal axis. The coordination of behavioral, anti-nociceptive and autonomic responses is due to the overlapping of the involved neurons in longitudinal columns.
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Affiliation(s)
- Giancarlo Carli
- Department of Medicine, Surgery and Neuroscience, University of Siena, Siena, Italy.
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29
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Abstract
Retinal circuits transform the pixel representation of photoreceptors into the feature representations of ganglion cells, whose axons transmit these representations to the brain. Functional, morphological, and transcriptomic surveys have identified more than 40 retinal ganglion cell (RGC) types in mice. RGCs extract features of varying complexity; some simply signal local differences in brightness (i.e., luminance contrast), whereas others detect specific motion trajectories. To understand the retina, we need to know how retinal circuits give rise to the diverse RGC feature representations. A catalog of the RGC feature set, in turn, is fundamental to understanding visual processing in the brain. Anterograde tracing indicates that RGCs innervate more than 50 areas in the mouse brain. Current maps connecting RGC types to brain areas are rudimentary, as is our understanding of how retinal signals are transformed downstream to guide behavior. In this article, I review the feature selectivities of mouse RGCs, how they arise, and how they are utilized downstream. Not only is knowledge of the behavioral purpose of RGC signals critical for understanding the retinal contributions to vision; it can also guide us to the most relevant areas of visual feature space. Expected final online publication date for the Annual Review of Vision Science, Volume 8 is September 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Daniel Kerschensteiner
- John F. Hardesty, MD, Department of Ophthalmology and Visual Sciences; Department of Neuroscience; Department of Biomedical Engineering; and Hope Center for Neurological Disorders, Washington University School of Medicine, Saint Louis, Missouri, USA;
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30
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Zapp SJ, Nitsche S, Gollisch T. Retinal receptive-field substructure: scaffolding for coding and computation. Trends Neurosci 2022; 45:430-445. [DOI: 10.1016/j.tins.2022.03.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 02/28/2022] [Accepted: 03/17/2022] [Indexed: 11/29/2022]
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31
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Neural circuit control of innate behaviors. SCIENCE CHINA. LIFE SCIENCES 2022; 65:466-499. [PMID: 34985643 DOI: 10.1007/s11427-021-2043-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 12/10/2021] [Indexed: 12/17/2022]
Abstract
All animals possess a plethora of innate behaviors that do not require extensive learning and are fundamental for their survival and propagation. With the advent of newly-developed techniques such as viral tracing and optogenetic and chemogenetic tools, recent studies are gradually unraveling neural circuits underlying different innate behaviors. Here, we summarize current development in our understanding of the neural circuits controlling predation, feeding, male-typical mating, and urination, highlighting the role of genetically defined neurons and their connections in sensory triggering, sensory to motor/motivation transformation, motor/motivation encoding during these different behaviors. Along the way, we discuss possible mechanisms underlying binge-eating disorder and the pro-social effects of the neuropeptide oxytocin, elucidating the clinical relevance of studying neural circuits underlying essential innate functions. Finally, we discuss some exciting brain structures recurrently appearing in the regulation of different behaviors, which suggests both divergence and convergence in the neural encoding of specific innate behaviors. Going forward, we emphasize the importance of multi-angle and cross-species dissections in delineating neural circuits that control innate behaviors.
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32
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Ganczer A, Szarka G, Balogh M, Hoffmann G, Tengölics ÁJ, Kenyon G, Kovács-Öller T, Völgyi B. Transience of the Retinal Output Is Determined by a Great Variety of Circuit Elements. Cells 2022; 11:cells11050810. [PMID: 35269432 PMCID: PMC8909309 DOI: 10.3390/cells11050810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 02/21/2022] [Accepted: 02/23/2022] [Indexed: 02/06/2023] Open
Abstract
Retinal ganglion cells (RGCs) encrypt stimulus features of the visual scene in action potentials and convey them toward higher visual centers in the brain. Although there are many visual features to encode, our recent understanding is that the ~46 different functional subtypes of RGCs in the retina share this task. In this scheme, each RGC subtype establishes a separate, parallel signaling route for a specific visual feature (e.g., contrast, the direction of motion, luminosity), through which information is conveyed. The efficiency of encoding depends on several factors, including signal strength, adaptational levels, and the actual efficacy of the underlying retinal microcircuits. Upon collecting inputs across their respective receptive field, RGCs perform further analysis (e.g., summation, subtraction, weighting) before they generate the final output spike train, which itself is characterized by multiple different features, such as the number of spikes, the inter-spike intervals, response delay, and the rundown time (transience) of the response. These specific kinetic features are essential for target postsynaptic neurons in the brain in order to effectively decode and interpret signals, thereby forming visual perception. We review recent knowledge regarding circuit elements of the mammalian retina that participate in shaping RGC response transience for optimal visual signaling.
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Affiliation(s)
- Alma Ganczer
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Gergely Szarka
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Márton Balogh
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Gyula Hoffmann
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Ádám Jonatán Tengölics
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Garrett Kenyon
- Los Alamos National Laboratory, Computer & Computational Science Division, Los Alamos, NM 87545, USA;
| | - Tamás Kovács-Öller
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
| | - Béla Völgyi
- Szentágothai Research Centre, University of Pécs, H-7624 Pécs, Hungary; (A.G.); (G.S.); (M.B.); (G.H.); (Á.J.T.); (T.K.-Ö.)
- Department of Experimental Zoology and Neurobiology, University of Pécs, H-7624 Pécs, Hungary
- MTA-PTE NAP 2 Retinal Electrical Synapses Research Group, H-7624 Pécs, Hungary
- Center for Neuroscience, University of Pécs, H-7624 Pécs, Hungary
- Correspondence:
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33
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Niu X, Huang S, Zhu M, Wang Z, Shi L. Surround Modulation Properties of Tectal Neurons in Pigeons Characterized by Moving and Flashed Stimuli. Animals (Basel) 2022; 12:ani12040475. [PMID: 35203185 PMCID: PMC8868286 DOI: 10.3390/ani12040475] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 02/09/2022] [Accepted: 02/10/2022] [Indexed: 11/16/2022] Open
Abstract
Simple Summary Surround modulation is a basic visual attribute of sensory neurons in many species and has been extensively characterized in mammal primary visual cortex, lateral geniculate nucleus, and superior colliculus. Little attention has been paid to birds, which have a highly developed visual system. We undertook a systematic analysis on surround modulation properties of tectal neurons in pigeons (Columba livia). This study complements existing studies on surrounding modulation properties in non-mammalian species and deepens the understanding of mechanisms of figure–background segmentation performed by avians. Abstract Surround modulation has been abundantly studied in several mammalian brain areas, including the primary visual cortex, lateral geniculate nucleus, and superior colliculus (SC), but systematic analysis is lacking in the avian optic tectum (OT, homologous to mammal SC). Here, multi-units were recorded from pigeon (Columba livia) OT, and responses to different sizes of moving, flashed squares, and bars were compared. The statistical results showed that most tectal neurons presented suppressed responses to larger stimuli in both moving and flashed paradigms, and suppression induced by flashed squares was comparable with moving ones when the stimuli center crossed the near classical receptive field (CRF) center, which corresponded to the full surrounding condition. Correspondingly, the suppression grew weaker when the stimuli center moved across the CRF border, equivalent to partially surrounding conditions. Similarly, suppression induced by full surrounding flashed squares was more intense than by partially surrounding flashed bars. These results suggest that inhibitions performed on tectal neurons appear to be full surrounding rather than locally lateral. This study enriches the understanding of surround modulation properties of avian tectum neurons and provides possible hypotheses about the arrangement of inhibitions from other nuclei, both of which are important for clarifying the mechanism of target detection against clutter background performed by avians.
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Affiliation(s)
- Xiaoke Niu
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China; (X.N.); (S.H.); (M.Z.); (Z.W.)
| | - Shuman Huang
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China; (X.N.); (S.H.); (M.Z.); (Z.W.)
| | - Minjie Zhu
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China; (X.N.); (S.H.); (M.Z.); (Z.W.)
| | - Zhizhong Wang
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China; (X.N.); (S.H.); (M.Z.); (Z.W.)
| | - Li Shi
- Henan Key Laboratory of Brain Science and Brain-Computer Interface Technology, School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China; (X.N.); (S.H.); (M.Z.); (Z.W.)
- Department of Automation, Tsinghua University, Beijing 100084, China
- Correspondence:
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34
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Synchronous inhibitory pathways create both efficiency and diversity in the retina. Proc Natl Acad Sci U S A 2022; 119:2116589119. [PMID: 35064086 PMCID: PMC8795495 DOI: 10.1073/pnas.2116589119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/02/2021] [Indexed: 11/25/2022] Open
Abstract
Complex connections in neural circuits make it difficult to quantitatively assign even the most basic neural computations to the actions of specific neurons. Retinal ganglion cells are most sensitive to changes in intensity across space and over time. This property, caused by a region known as the receptive field surround, improves information transmission about natural scenes. We dynamically manipulated individual interneurons to directly measure their effect on retinal receptive fields, finding that two inhibitory neuron types, horizontal cells and amacrine cells, synchronously create the same contribution to the receptive field surround at different spatial scales. By analyzing large populations of ganglion cells, we show that this arrangement increases diversity in retinal signaling while preserving maximal information transmission about natural scenes. Sensory receptive fields combine features that originate in different neural pathways. Retinal ganglion cell receptive fields compute intensity changes across space and time using a peripheral region known as the surround, a property that improves information transmission about natural scenes. The visual features that construct this fundamental property have not been quantitatively assigned to specific interneurons. Here, we describe a generalizable approach using simultaneous intracellular and multielectrode recording to directly measure and manipulate the sensory feature conveyed by a neural pathway to a downstream neuron. By directly controlling the gain of individual interneurons in the circuit, we show that rather than transmitting different temporal features, inhibitory horizontal cells and linear amacrine cells synchronously create the linear surround at different spatial scales and that these two components fully account for the surround. By analyzing a large population of ganglion cells, we observe substantial diversity in the relative contribution of amacrine and horizontal cell visual features while still allowing individual cells to increase information transmission under the statistics of natural scenes. Established theories of efficient coding have shown that optimal information transmission under natural scenes allows a diverse set of receptive fields. Our results give a mechanism for this theory, showing how distinct neural pathways synthesize a sensory computation and how this architecture both generates computational diversity and achieves the objective of high information transmission.
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35
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Zhang Z, Wang S, Liu C, Xie R, Hu W, Zhou P. All-in-one two-dimensional retinomorphic hardware device for motion detection and recognition. NATURE NANOTECHNOLOGY 2022; 17:27-32. [PMID: 34750561 DOI: 10.1038/s41565-021-01003-1] [Citation(s) in RCA: 90] [Impact Index Per Article: 45.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Accepted: 09/08/2021] [Indexed: 06/13/2023]
Abstract
With the advent of the Internet of Things era, the detection and recognition of moving objects is becoming increasingly important1. The current motion detection and recognition (MDR) technology based on the complementary metal oxide semiconductor (CMOS) image sensors (CIS) platform contains redundant sensing, transmission conversion, processing and memory modules, rendering the existing systems bulky and inefficient in comparison to the human retina. Until now, non-memory capable vision sensors have only been used for static targets, rather than MDR. Here, we present a retina-inspired two-dimensional (2D) heterostructure based retinomorphic hardware device with all-in-one perception, memory and computing capabilities for the detection and recognition of moving trolleys. The proposed 2D retinomorphic device senses an optical stimulus to generate progressively tuneable positive/negative photoresponses and memorizes it, combined with interframe differencing computations, to achieve 100% separation detection of moving trichromatic trolleys without ghosting. The detected motion images are fed into a conductance mapped neural network to achieve fast trolley recognition in as few as four training epochs at 10% noise level, outperforming previous results from similar customized datasets. The prototype demonstration of a 2D retinomorphic device with integrated perceptual memory and computation provides the possibility of building compact, efficient MDR hardware.
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Affiliation(s)
- Zhenhan Zhang
- State Key Laboratory of ASIC and Systems, School of Microelectronics, Fudan University, Shanghai, China
- State Key Laboratory of Infrared Physics, Shanghai Institute of Technical Physics, Chinese Academy of Sciences, Shanghai, China
| | - Shuiyuan Wang
- State Key Laboratory of ASIC and Systems, School of Microelectronics, Fudan University, Shanghai, China
| | - Chunsen Liu
- State Key Laboratory of ASIC and Systems, School of Microelectronics, Fudan University, Shanghai, China
- Frontier Institute of Chip and System, Shanghai Frontier Base of Intelligent Optoelectronics and Perception, Institute of Optoelectronics, Fudan University, Shanghai, China
| | - Runzhang Xie
- State Key Laboratory of Infrared Physics, Shanghai Institute of Technical Physics, Chinese Academy of Sciences, Shanghai, China
| | - Weida Hu
- State Key Laboratory of Infrared Physics, Shanghai Institute of Technical Physics, Chinese Academy of Sciences, Shanghai, China.
| | - Peng Zhou
- State Key Laboratory of ASIC and Systems, School of Microelectronics, Fudan University, Shanghai, China.
- Frontier Institute of Chip and System, Shanghai Frontier Base of Intelligent Optoelectronics and Perception, Institute of Optoelectronics, Fudan University, Shanghai, China.
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36
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Marino J. Predictive Coding, Variational Autoencoders, and Biological Connections. Neural Comput 2021; 34:1-44. [PMID: 34758480 DOI: 10.1162/neco_a_01458] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2021] [Accepted: 08/14/2021] [Indexed: 11/04/2022]
Abstract
We present a review of predictive coding, from theoretical neuroscience, and variational autoencoders, from machine learning, identifying the common origin and mathematical framework underlying both areas. As each area is prominent within its respective field, more firmly connecting these areas could prove useful in the dialogue between neuroscience and machine learning. After reviewing each area, we discuss two possible correspondences implied by this perspective: cortical pyramidal dendrites as analogous to (nonlinear) deep networks and lateral inhibition as analogous to normalizing flows. These connections may provide new directions for further investigations in each field.
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Affiliation(s)
- Joseph Marino
- Computation and Neural Systems, California Institute of Technology, Pasadena, CA 91125, U.S.A.
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37
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Messina A, Potrich D, Schiona I, Sovrano VA, Vallortigara G. The Sense of Number in Fish, with Particular Reference to Its Neurobiological Bases. Animals (Basel) 2021; 11:ani11113072. [PMID: 34827804 PMCID: PMC8614421 DOI: 10.3390/ani11113072] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/13/2021] [Accepted: 10/22/2021] [Indexed: 01/29/2023] Open
Abstract
Simple Summary The ability to deal with quantity, both discrete (numerosities) and continuous (spatial or temporal extent) developed from an evolutionarily conserved system for approximating numerical magnitude. Non-symbolic number cognition based on an approximate sense of magnitude has been documented in a variety of vertebrate species, including fish. Fish, in particular zebrafish, are widely used as models for the investigation of the genetics and molecular mechanisms of behavior, and thus may be instrumental to development of a neurobiology of number cognition. We review here the behavioural studies that have permitted to identify numerical abilities in fish, and the current status of the research related to the neurobiological bases of these abilities with special reference to zebrafish. Combining behavioural tasks with molecular genetics, molecular biology and confocal microscopy, a role of the retina and optic tectum in the encoding of continuous magnitude in larval zebrafish has been reported, while the thalamus and the dorso-central subdivision of pallium in the encoding of discrete magnitude (number) has been documented in adult zebrafish. Research in fish, in particular zebrafish, may reveal instrumental for identifying and characterizing the molecular signature of neurons involved in quantity discrimination processes of all vertebrates, including humans. Abstract It is widely acknowledged that vertebrates can discriminate non-symbolic numerosity using an evolutionarily conserved system dubbed Approximate Number System (ANS). Two main approaches have been used to assess behaviourally numerosity in fish: spontaneous choice tests and operant training procedures. In the first, animals spontaneously choose between sets of biologically-relevant stimuli (e.g., conspecifics, food) differing in quantities (smaller or larger). In the second, animals are trained to associate a numerosity with a reward. Although the ability of fish to discriminate numerosity has been widely documented with these methods, the molecular bases of quantities estimation and ANS are largely unknown. Recently, we combined behavioral tasks with molecular biology assays (e.g c-fos and egr1 and other early genes expression) showing that the thalamus and the caudal region of dorso-central part of the telencephalon seem to be activated upon change in numerousness in visual stimuli. In contrast, the retina and the optic tectum mainly responded to changes in continuous magnitude such as stimulus size. We here provide a review and synthesis of these findings.
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Affiliation(s)
- Andrea Messina
- Centre for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy; (D.P.); (I.S.); (V.A.S.)
- Correspondence: (A.M.); (G.V.)
| | - Davide Potrich
- Centre for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy; (D.P.); (I.S.); (V.A.S.)
| | - Ilaria Schiona
- Centre for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy; (D.P.); (I.S.); (V.A.S.)
| | - Valeria Anna Sovrano
- Centre for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy; (D.P.); (I.S.); (V.A.S.)
- Department of Psychology and Cognitive Science, University of Trento, 38068 Rovereto, Italy
| | - Giorgio Vallortigara
- Centre for Mind/Brain Sciences, University of Trento, 38068 Rovereto, Italy; (D.P.); (I.S.); (V.A.S.)
- Correspondence: (A.M.); (G.V.)
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Oculo-retinal dynamics can explain the perception of minimal recognizable configurations. Proc Natl Acad Sci U S A 2021; 118:2022792118. [PMID: 34417308 DOI: 10.1073/pnas.2022792118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Natural vision is a dynamic and continuous process. Under natural conditions, visual object recognition typically involves continuous interactions between ocular motion and visual contrasts, resulting in dynamic retinal activations. In order to identify the dynamic variables that participate in this process and are relevant for image recognition, we used a set of images that are just above and below the human recognition threshold and whose recognition typically requires >2 s of viewing. We recorded eye movements of participants while attempting to recognize these images within trials lasting 3 s. We then assessed the activation dynamics of retinal ganglion cells resulting from ocular dynamics using a computational model. We found that while the saccadic rate was similar between recognized and unrecognized trials, the fixational ocular speed was significantly larger for unrecognized trials. Interestingly, however, retinal activation level was significantly lower during these unrecognized trials. We used retinal activation patterns and oculomotor parameters of each fixation to train a binary classifier, classifying recognized from unrecognized trials. Only retinal activation patterns could predict recognition, reaching 80% correct classifications on the fourth fixation (on average, ∼2.5 s from trial onset). We thus conclude that the information that is relevant for visual perception is embedded in the dynamic interactions between the oculomotor sequence and the image. Hence, our results suggest that ocular dynamics play an important role in recognition and that understanding the dynamics of retinal activation is crucial for understanding natural vision.
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Matsumoto A, Agbariah W, Nolte SS, Andrawos R, Levi H, Sabbah S, Yonehara K. Direction selectivity in retinal bipolar cell axon terminals. Neuron 2021; 109:2928-2942.e8. [PMID: 34390651 PMCID: PMC8478419 DOI: 10.1016/j.neuron.2021.07.008] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 06/18/2021] [Accepted: 07/09/2021] [Indexed: 12/20/2022]
Abstract
The ability to encode the direction of image motion is fundamental to our sense of vision. Direction selectivity along the four cardinal directions is thought to originate in direction-selective ganglion cells (DSGCs) because of directionally tuned GABAergic suppression by starburst cells. Here, by utilizing two-photon glutamate imaging to measure synaptic release, we reveal that direction selectivity along all four directions arises earlier than expected at bipolar cell outputs. Individual bipolar cells contained four distinct populations of axon terminal boutons with different preferred directions. We further show that this bouton-specific tuning relies on cholinergic excitation from starburst cells and GABAergic inhibition from wide-field amacrine cells. DSGCs received both tuned directionally aligned inputs and untuned inputs from among heterogeneously tuned glutamatergic bouton populations. Thus, directional tuning in the excitatory visual pathway is incrementally refined at the bipolar cell axon terminals and their recipient DSGC dendrites by two different neurotransmitters co-released from starburst cells. Cardinal direction selectivity emerges at types 7 and 2 bipolar cell axon terminals Starburst amacrine cells are necessary for direction selectivity in bipolar cells Cholinergic excitation and GABAergic inhibition are integrated at axon terminals Direction-selective ganglion cells receive directionally aligned glutamate inputs
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Affiliation(s)
- Akihiro Matsumoto
- Danish Research Institute of Translational Neuroscience - DANDRITE, Nordic-EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, Ole Worms Allé 8, 8000 Aarhus C, Denmark
| | - Weaam Agbariah
- Department of Medical Neurobiology, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112102, Israel
| | - Stella Solveig Nolte
- Danish Research Institute of Translational Neuroscience - DANDRITE, Nordic-EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, Ole Worms Allé 8, 8000 Aarhus C, Denmark
| | - Rawan Andrawos
- Department of Medical Neurobiology, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112102, Israel
| | - Hadara Levi
- Department of Medical Neurobiology, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112102, Israel
| | - Shai Sabbah
- Department of Medical Neurobiology, Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem 9112102, Israel.
| | - Keisuke Yonehara
- Danish Research Institute of Translational Neuroscience - DANDRITE, Nordic-EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, Ole Worms Allé 8, 8000 Aarhus C, Denmark.
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Abstract
Time is largely a hidden variable in vision. It is the condition for seeing interesting things such as spatial forms and patterns, colours and movements in the external world, and yet is not meant to be noticed in itself. Temporal aspects of visual processing have received comparatively little attention in research. Temporal properties have been made explicit mainly in measurements of resolution and integration in simple tasks such as detection of spatially homogeneous flicker or light pulses of varying duration. Only through a mechanistic understanding of their basis in retinal photoreceptors and circuits can such measures guide modelling of natural vision in different species and illuminate functional and evolutionary trade-offs. Temporal vision research would benefit from bridging traditions that speak different languages. Towards that goal, I here review studies from the fields of human psychophysics, retinal physiology and neuroethology, with a focus on fundamental constraints set by early vision. Summary: Simple measures of temporal vision such as the critical flicker frequency can be useful for modelling natural vision only if their relationship to photoreceptor responses and retinal processing is understood.
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Affiliation(s)
- Kristian Donner
- Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, 00014 Helsinki, Finland
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41
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Ding J, Chen A, Chung J, Acaron Ledesma H, Wu M, Berson DM, Palmer SE, Wei W. Spatially displaced excitation contributes to the encoding of interrupted motion by a retinal direction-selective circuit. eLife 2021; 10:e68181. [PMID: 34096504 PMCID: PMC8211448 DOI: 10.7554/elife.68181] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 06/06/2021] [Indexed: 12/19/2022] Open
Abstract
Spatially distributed excitation and inhibition collectively shape a visual neuron's receptive field (RF) properties. In the direction-selective circuit of the mammalian retina, the role of strong null-direction inhibition of On-Off direction-selective ganglion cells (On-Off DSGCs) on their direction selectivity is well-studied. However, how excitatory inputs influence the On-Off DSGC's visual response is underexplored. Here, we report that On-Off DSGCs have a spatially displaced glutamatergic receptive field along their horizontal preferred-null motion axes. This displaced receptive field contributes to DSGC null-direction spiking during interrupted motion trajectories. Theoretical analyses indicate that population responses during interrupted motion may help populations of On-Off DSGCs signal the spatial location of moving objects in complex, naturalistic visual environments. Our study highlights that the direction-selective circuit exploits separate sets of mechanisms under different stimulus conditions, and these mechanisms may help encode multiple visual features.
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Affiliation(s)
- Jennifer Ding
- Committee on Neurobiology Graduate Program, The University of ChicagoChicagoUnited States
- Department of Neurobiology, The University of ChicagoChicagoUnited States
| | - Albert Chen
- Department of Organismal Biology, The University of ChicagoChicagoUnited States
| | - Janet Chung
- Department of Neurobiology, The University of ChicagoChicagoUnited States
| | - Hector Acaron Ledesma
- Graduate Program in Biophysical Sciences, The University of ChicagoChicagoUnited States
| | - Mofei Wu
- Department of Neurobiology, The University of ChicagoChicagoUnited States
| | - David M Berson
- Department of Neuroscience and Carney Institute for Brain Science, Brown UniversityProvidenceUnited States
| | - Stephanie E Palmer
- Committee on Neurobiology Graduate Program, The University of ChicagoChicagoUnited States
- Department of Organismal Biology, The University of ChicagoChicagoUnited States
- Grossman Institute for Neuroscience, Quantitative Biology and Human Behavior, The University of ChicagoChicagoUnited States
| | - Wei Wei
- Committee on Neurobiology Graduate Program, The University of ChicagoChicagoUnited States
- Department of Neurobiology, The University of ChicagoChicagoUnited States
- Grossman Institute for Neuroscience, Quantitative Biology and Human Behavior, The University of ChicagoChicagoUnited States
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Metzen MG, Chacron MJ. Population Coding of Natural Electrosensory Stimuli by Midbrain Neurons. J Neurosci 2021; 41:3822-3841. [PMID: 33687962 PMCID: PMC8084312 DOI: 10.1523/jneurosci.2232-20.2021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 02/27/2021] [Accepted: 03/01/2021] [Indexed: 12/27/2022] Open
Abstract
Natural stimuli display spatiotemporal characteristics that typically vary over orders of magnitude, and their encoding by sensory neurons remains poorly understood. We investigated population coding of highly heterogeneous natural electrocommunication stimuli in Apteronotus leptorhynchus of either sex. Neuronal activities were positively correlated with one another in the absence of stimulation, and correlation magnitude decayed with increasing distance between recording sites. Under stimulation, we found that correlations between trial-averaged neuronal responses (i.e., signal correlations) were positive and higher in magnitude for neurons located close to another, but that correlations between the trial-to-trial variability (i.e., noise correlations) were independent of physical distance. Overall, signal and noise correlations were independent of stimulus waveform as well as of one another. To investigate how neuronal populations encoded natural electrocommunication stimuli, we considered a nonlinear decoder for which the activities were combined. Decoding performance was best for a timescale of 6 ms, indicating that midbrain neurons transmit information via precise spike timing. A simple summation of neuronal activities (equally weighted sum) revealed that noise correlations limited decoding performance by introducing redundancy. Using an evolution algorithm to optimize performance when considering instead unequally weighted sums of neuronal activities revealed much greater performance values, indicating that midbrain neuron populations transmit information that reliably enable discrimination between different stimulus waveforms. Interestingly, we found that different weight combinations gave rise to similar discriminability, suggesting robustness. Our results have important implications for understanding how natural stimuli are integrated by downstream brain areas to give rise to behavioral responses.SIGNIFICANCE STATEMENT We show that midbrain electrosensory neurons display correlations between their activities and that these can significantly impact performance of decoders. While noise correlations limited discrimination performance by introducing redundancy, considering unequally weighted sums of neuronal activities gave rise to much improved performance and mitigated the deleterious effects of noise correlations. Further analysis revealed that increased discriminability was achieved by making trial-averaged responses more separable, as well as by reducing trial-to-trial variability by eliminating noise correlations. We further found that multiple combinations of weights could give rise to similar discrimination performances, which suggests that such combinatorial codes could be achieved in the brain. We conclude that the activities of midbrain neuronal populations can be used to reliably discriminate between highly heterogeneous stimulus waveforms.
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Affiliation(s)
- Michael G Metzen
- Department of Physiology, McGill University, Montreal, Quebec H3G 1Y6, Canada
| | - Maurice J Chacron
- Department of Physiology, McGill University, Montreal, Quebec H3G 1Y6, Canada
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Nonlinear spatial integration in retinal bipolar cells shapes the encoding of artificial and natural stimuli. Neuron 2021; 109:1692-1706.e8. [PMID: 33798407 PMCID: PMC8153253 DOI: 10.1016/j.neuron.2021.03.015] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 01/22/2021] [Accepted: 03/10/2021] [Indexed: 11/21/2022]
Abstract
The retina dissects the visual scene into parallel information channels, which extract specific visual features through nonlinear processing. The first nonlinear stage is typically considered to occur at the output of bipolar cells, resulting from nonlinear transmitter release from synaptic terminals. In contrast, we show here that bipolar cells themselves can act as nonlinear processing elements at the level of their somatic membrane potential. Intracellular recordings from bipolar cells in the salamander retina revealed frequent nonlinear integration of visual signals within bipolar cell receptive field centers, affecting the encoding of artificial and natural stimuli. These nonlinearities provide sensitivity to spatial structure below the scale of bipolar cell receptive fields in both bipolar and downstream ganglion cells and appear to arise at the excitatory input into bipolar cells. Thus, our data suggest that nonlinear signal pooling starts earlier than previously thought: that is, at the input stage of bipolar cells. Some retinal bipolar cells represent visual contrast in a nonlinear fashion These bipolar cells also nonlinearly integrate visual signals over space The spatial nonlinearity affects the encoding of natural stimuli by bipolar cells The nonlinearity results from feedforward input, not from feedback inhibition
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Nonlinear Spatial Integration Underlies the Diversity of Retinal Ganglion Cell Responses to Natural Images. J Neurosci 2021; 41:3479-3498. [PMID: 33664129 PMCID: PMC8051676 DOI: 10.1523/jneurosci.3075-20.2021] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 02/05/2021] [Accepted: 02/09/2021] [Indexed: 02/06/2023] Open
Abstract
How neurons encode natural stimuli is a fundamental question for sensory neuroscience. In the early visual system, standard encoding models assume that neurons linearly filter incoming stimuli through their receptive fields, but artificial stimuli, such as contrast-reversing gratings, often reveal nonlinear spatial processing. We investigated to what extent such nonlinear processing is relevant for the encoding of natural images in retinal ganglion cells in mice of either sex. How neurons encode natural stimuli is a fundamental question for sensory neuroscience. In the early visual system, standard encoding models assume that neurons linearly filter incoming stimuli through their receptive fields, but artificial stimuli, such as contrast-reversing gratings, often reveal nonlinear spatial processing. We investigated to what extent such nonlinear processing is relevant for the encoding of natural images in retinal ganglion cells in mice of either sex. We found that standard linear receptive field models yielded good predictions of responses to flashed natural images for a subset of cells but failed to capture the spiking activity for many others. Cells with poor model performance displayed pronounced sensitivity to fine spatial contrast and local signal rectification as the dominant nonlinearity. By contrast, sensitivity to high-frequency contrast-reversing gratings, a classical test for nonlinear spatial integration, was not a good predictor of model performance and thus did not capture the variability of nonlinear spatial integration under natural images. In addition, we also observed a class of nonlinear ganglion cells with inverse tuning for spatial contrast, responding more strongly to spatially homogeneous than to spatially structured stimuli. These findings highlight the diversity of receptive field nonlinearities as a crucial component for understanding early sensory encoding in the context of natural stimuli. SIGNIFICANCE STATEMENT Experiments with artificial visual stimuli have revealed that many types of retinal ganglion cells pool spatial input signals nonlinearly. However, it is still unclear how relevant this nonlinear spatial integration is when the input signals are natural images. Here we analyze retinal responses to natural scenes in large populations of mouse ganglion cells. We show that nonlinear spatial integration strongly influences responses to natural images for some ganglion cells, but not for others. Cells with nonlinear spatial integration were sensitive to spatial structure inside their receptive fields, and a small group of cells displayed a surprising sensitivity to spatially homogeneous stimuli. Traditional analyses with contrast-reversing gratings did not predict this variability of nonlinear spatial integration under natural images.
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45
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Yedutenko M, Howlett MHC, Kamermans M. High Contrast Allows the Retina to Compute More Than Just Contrast. Front Cell Neurosci 2021; 14:595193. [PMID: 33519381 PMCID: PMC7843368 DOI: 10.3389/fncel.2020.595193] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2020] [Accepted: 12/22/2020] [Indexed: 11/29/2022] Open
Abstract
The goal of sensory processing is to represent the environment of an animal. All sensory systems share a similar constraint: they need to encode a wide range of stimulus magnitudes within their narrow neuronal response range. The most efficient way, exploited by even the simplest nervous systems, is to encode relative changes in stimulus magnitude rather than the absolute magnitudes. For instance, the retina encodes contrast, which are the variations of light intensity occurring in time and in space. From this perspective, it is easy to understand why the bright plumage of a moving bird gains a lot of attention, while an octopus remains motionless and mimics its surroundings for concealment. Stronger contrasts simply cause stronger visual signals. However, the gains in retinal performance associated with higher contrast are far more than what can be attributed to just a trivial linear increase in signal strength. Here we discuss how this improvement in performance is reflected throughout different parts of the neural circuitry, within its neural code and how high contrast activates many non-linear mechanisms to unlock several sophisticated retinal computations that are virtually impossible in low contrast conditions.
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Affiliation(s)
- Matthew Yedutenko
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
| | - Marcus H. C. Howlett
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
| | - Maarten Kamermans
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
- Department of Biomedical Physics and Biomedical Optics, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, Netherlands
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46
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Souihel S, Cessac B. On the potential role of lateral connectivity in retinal anticipation. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2021; 11:3. [PMID: 33420903 PMCID: PMC7796858 DOI: 10.1186/s13408-020-00101-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 12/15/2020] [Indexed: 06/12/2023]
Abstract
We analyse the potential effects of lateral connectivity (amacrine cells and gap junctions) on motion anticipation in the retina. Our main result is that lateral connectivity can-under conditions analysed in the paper-trigger a wave of activity enhancing the anticipation mechanism provided by local gain control (Berry et al. in Nature 398(6725):334-338, 1999; Chen et al. in J. Neurosci. 33(1):120-132, 2013). We illustrate these predictions by two examples studied in the experimental literature: differential motion sensitive cells (Baccus and Meister in Neuron 36(5):909-919, 2002) and direction sensitive cells where direction sensitivity is inherited from asymmetry in gap junctions connectivity (Trenholm et al. in Nat. Neurosci. 16:154-156, 2013). We finally present reconstructions of retinal responses to 2D visual inputs to assess the ability of our model to anticipate motion in the case of three different 2D stimuli.
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Affiliation(s)
- Selma Souihel
- Biovision Team and Neuromod Institute, Inria, Université Côte d'Azur, Nice, France.
| | - Bruno Cessac
- Biovision Team and Neuromod Institute, Inria, Université Côte d'Azur, Nice, France
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47
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Keller AJ, Dipoppa M, Roth MM, Caudill MS, Ingrosso A, Miller KD, Scanziani M. A Disinhibitory Circuit for Contextual Modulation in Primary Visual Cortex. Neuron 2020; 108:1181-1193.e8. [PMID: 33301712 PMCID: PMC7850578 DOI: 10.1016/j.neuron.2020.11.013] [Citation(s) in RCA: 52] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Revised: 10/17/2020] [Accepted: 11/13/2020] [Indexed: 12/24/2022]
Abstract
Context guides perception by influencing stimulus saliency. Accordingly, in visual cortex, responses to a stimulus are modulated by context, the visual scene surrounding the stimulus. Responses are suppressed when stimulus and surround are similar but not when they differ. The underlying mechanisms remain unclear. Here, we use optical recordings, manipulations, and computational modeling to show that disinhibitory circuits consisting of vasoactive intestinal peptide (VIP)-expressing and somatostatin (SOM)-expressing inhibitory neurons modulate responses in mouse visual cortex depending on similarity between stimulus and surround, primarily by modulating recurrent excitation. When stimulus and surround are similar, VIP neurons are inactive, and activity of SOM neurons leads to suppression of excitatory neurons. However, when stimulus and surround differ, VIP neurons are active, inhibiting SOM neurons, which leads to relief of excitatory neurons from suppression. We have identified a canonical cortical disinhibitory circuit that contributes to contextual modulation and may regulate perceptual saliency.
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Affiliation(s)
- Andreas J Keller
- Department of Physiology, University of California, San Francisco, San Francisco, CA 94158-0444, USA; Howard Hughes Medical Institute, University of California, San Francisco, San Francisco, CA, USA.
| | - Mario Dipoppa
- Center for Theoretical Neuroscience, College of Physicians and Surgeons and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York City, NY 10027, USA.
| | - Morgane M Roth
- Department of Physiology, University of California, San Francisco, San Francisco, CA 94158-0444, USA; Howard Hughes Medical Institute, University of California, San Francisco, San Francisco, CA, USA.
| | - Matthew S Caudill
- Center for Neural Circuits and Behavior, Neurobiology Section and Department of Neuroscience, University of California, San Diego, La Jolla, CA 92093-0634, USA; Howard Hughes Medical Institute, University of California, San Francisco, San Francisco, CA, USA
| | - Alessandro Ingrosso
- Center for Theoretical Neuroscience, College of Physicians and Surgeons and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York City, NY 10027, USA
| | - Kenneth D Miller
- Center for Theoretical Neuroscience, College of Physicians and Surgeons and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York City, NY 10027, USA; Department of Neuroscience, Swartz Program in Theoretical Neuroscience, Kavli Institute for Brain Science, College of Physicians and Surgeons and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York City, NY, USA.
| | - Massimo Scanziani
- Department of Physiology, University of California, San Francisco, San Francisco, CA 94158-0444, USA; Center for Neural Circuits and Behavior, Neurobiology Section and Department of Neuroscience, University of California, San Diego, La Jolla, CA 92093-0634, USA; Howard Hughes Medical Institute, University of California, San Francisco, San Francisco, CA, USA.
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48
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Lee MJ, Zeck G. Electrical Imaging of Light-Induced Signals Across and Within Retinal Layers. Front Neurosci 2020; 14:563964. [PMID: 33328846 PMCID: PMC7717958 DOI: 10.3389/fnins.2020.563964] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 10/12/2020] [Indexed: 11/20/2022] Open
Abstract
The mammalian retina processes sensory signals through two major pathways: a vertical excitatory pathway, which involves photoreceptors, bipolar cells, and ganglion cells, and a horizontal inhibitory pathway, which involves horizontal cells, and amacrine cells. This concept explains the generation of an excitatory center—inhibitory surround sensory receptive fields—but fails to explain the modulation of the retinal output by stimuli outside the receptive field. Electrical imaging of light-induced signal propagation at high spatial and temporal resolution across and within different retinal layers might reveal mechanisms and circuits involved in the remote modulation of the retinal output. Here we took advantage of a high-density complementary metal oxide semiconductor-based microelectrode array and investigated the light-induced propagation of local field potentials (LFPs) in vertical mouse retina slices. Surprisingly, the LFP propagation within the different retinal layers depends on stimulus duration and stimulus background. Application of the same spatially restricted light stimuli to flat-mounted retina induced ganglion cell activity at remote distances from the stimulus center. This effect disappeared if a global background was provided or if gap junctions were blocked. We hereby present a neurotechnological approach and demonstrated its application, in which electrical imaging evaluates stimulus-dependent signal processing across different neural layers.
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Affiliation(s)
- Meng-Jung Lee
- Neurophysics, NMI Natural and Medical Sciences Institute at the University Tübingen, Reutlingen, Germany.,Graduate School of Neural Information Processing, International Max Planck Research School, Tübingen, Germany
| | - Günther Zeck
- Neurophysics, NMI Natural and Medical Sciences Institute at the University Tübingen, Reutlingen, Germany
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49
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Wang C, Lian R, Dong X, Mi Y, Wu S. A Neural Network Model With Gap Junction for Topological Detection. Front Comput Neurosci 2020; 14:571982. [PMID: 33178003 PMCID: PMC7591819 DOI: 10.3389/fncom.2020.571982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 10/02/2020] [Indexed: 11/26/2022] Open
Abstract
Visual information processing in the brain goes from global to local. A large volume of experimental studies has suggested that among global features, the brain perceives the topological information of an image first. Here, we propose a neural network model to elucidate the underlying computational mechanism. The model consists of two parts. The first part is a neural network in which neurons are coupled through gap junctions, mimicking the neural circuit formed by alpha ganglion cells in the retina. Gap junction plays a key role in the model, which, on one hand, facilitates the synchronized firing of a neuron group covering a connected region of an image, and on the other hand, staggers the firing moments of different neuron groups covering disconnected regions of the image. These two properties endow the network with the capacity of detecting the connectivity and closure of images. The second part of the model is a read-out neuron, which reads out the topological information that has been converted into the number of synchronized firings in the retina network. Our model provides a simple yet effective mechanism for the neural system to detect the topological information of images in ultra-speed.
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Affiliation(s)
- Chaoming Wang
- Peking-Tsinghua Center for Life Sciences, School of Electronics Engineering and Computer Science, IDG/McGovern Institute for Brain Research, Peking University, Academy for Advanced Interdisceplinary Studies, Beijing, China.,Hefei Comprehensive National Science Center, Institute of Artificial Intelligence, Hefei, China.,Chinese Institute for Brain Research, Beijing, China
| | - Risheng Lian
- Peking-Tsinghua Center for Life Sciences, School of Electronics Engineering and Computer Science, IDG/McGovern Institute for Brain Research, Peking University, Academy for Advanced Interdisceplinary Studies, Beijing, China
| | - Xingsi Dong
- Peking-Tsinghua Center for Life Sciences, School of Electronics Engineering and Computer Science, IDG/McGovern Institute for Brain Research, Peking University, Academy for Advanced Interdisceplinary Studies, Beijing, China
| | - Yuanyuan Mi
- Center for Neurointelligence, School of Medicine, Chongqing University, Chongqing, China
| | - Si Wu
- Peking-Tsinghua Center for Life Sciences, School of Electronics Engineering and Computer Science, IDG/McGovern Institute for Brain Research, Peking University, Academy for Advanced Interdisceplinary Studies, Beijing, China.,Hefei Comprehensive National Science Center, Institute of Artificial Intelligence, Hefei, China
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Kim T, Shen N, Hsiang JC, Johnson KP, Kerschensteiner D. Dendritic and parallel processing of visual threats in the retina control defensive responses. SCIENCE ADVANCES 2020; 6:6/47/eabc9920. [PMID: 33208370 PMCID: PMC7673819 DOI: 10.1126/sciadv.abc9920] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 10/01/2020] [Indexed: 05/03/2023]
Abstract
Approaching predators cast expanding shadows (i.e., looming) that elicit innate defensive responses in most animals. Where looming is first detected and how critical parameters of predatory approaches are extracted are unclear. In mice, we identify a retinal interneuron (the VG3 amacrine cell) that responds robustly to looming, but not to related forms of motion. Looming-sensitive calcium transients are restricted to a specific layer of the VG3 dendrite arbor, which provides glutamatergic input to two ganglion cells (W3 and OFFα). These projection neurons combine shared excitation with dissimilar inhibition to signal approach onset and speed, respectively. Removal of VG3 amacrine cells reduces the excitation of W3 and OFFα ganglion cells and diminishes defensive responses of mice to looming without affecting other visual behaviors. Thus, the dendrites of a retinal interneuron detect visual threats, divergent circuits downstream extract critical threat parameters, and these retinal computations initiate an innate survival behavior.
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Affiliation(s)
- T Kim
- John F. Hardesty, MD Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, MO 63110, USA
- Graduate Program in Neuroscience, Washington University School of Medicine, Saint Louis, MO 63110, USA
| | - N Shen
- John F. Hardesty, MD Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, MO 63110, USA
| | - J-C Hsiang
- John F. Hardesty, MD Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, MO 63110, USA
- Graduate Program in Neuroscience, Washington University School of Medicine, Saint Louis, MO 63110, USA
| | - K P Johnson
- John F. Hardesty, MD Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, MO 63110, USA
- Graduate Program in Neuroscience, Washington University School of Medicine, Saint Louis, MO 63110, USA
| | - D Kerschensteiner
- John F. Hardesty, MD Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, MO 63110, USA.
- Department of Neurosciences, Washington University School of Medicine, Saint Louis, MO 63110, USA
- Department of Biomedical Engineering, Washington University School of Medicine, Saint Louis, MO 63110, USA
- Hope Center for Neurological Disorders, Washington University School of Medicine, Saint Louis, MO 63110, USA
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