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Jiang C, Wang JX, Liu D, Wu E, Gu XW, Zhang X, Li B, Chen B, Qian G. Supramolecular Entanglement in a Hydrogen-Bonded Organic Framework Enables Flexible-Robust Porosity for Highly Efficient Purification of Natural Gas. Angew Chem Int Ed Engl 2024; 63:e202404734. [PMID: 38635373 DOI: 10.1002/anie.202404734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Revised: 04/03/2024] [Accepted: 04/18/2024] [Indexed: 04/20/2024]
Abstract
The development of porous materials with flexible-robust characteristics shows some unique advantages to target high performance for gas separation, but remains a daunting challenge to achieve so far. Herein, we report a carboxyl-based hydrogen-bonded organic framework (ZJU-HOF-8a) with flexible-robust porosity for efficient purification of natural gas. ZJU-HOF-8a features a four-fold interpenetrated structure with dia topology, wherein abundant supramolecular entanglements are formed between the adjacent subnetworks through weak intermolecular hydrogen bonds. This structural configuration could not only stabilize the whole framework to establish the permanent porosity, but also enable the framework to show some flexibility due to its weak intermolecular interactions (so-called flexible-robust framework). The flexible-robust porosity of ZJU-HOF-8a was exclusively confirmed by gas sorption isotherms and single-crystal X-ray diffraction studies, showing that the flexible pore pockets can be opened by C3H8 and n-C4H10 molecules rather by C2H6 and CH4. This leads to notably higher C3H8 and n-C4H10 uptakes with enhanced selectivities than C2H6 over CH4 under ambient conditions, affording one of the highest n-C4H10/CH4 selectivities. The gas-loaded single-crystal structures coupled with theoretical simulations reveal that the loading of n-C4H10 can induce an obvious framework expansion along with pore pocket opening to improve n-C4H10 uptake and selectivity, while not for C2H6 adsorption. This work suggests an effective strategy of designing flexible-robust HOFs for improving gas separation properties.
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Affiliation(s)
- Chenghao Jiang
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Jia-Xin Wang
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Di Liu
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Enyu Wu
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Xiao-Wen Gu
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Xu Zhang
- Jiangsu Engineering Laboratory for Environmental Functional Materials, School of Chemistry and Chemical Engineering, Huaiyin Normal University, Huaian, 223300, China
| | - Bin Li
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Banglin Chen
- Fujian Provincial Key Laboratory of Polymer Materials, College of Chemistry and Materials Science, Fujian Normal University, Fuzhou, 350007, China
| | - Guodong Qian
- State Key Laboratory of Silicon and Advanced Semiconductor Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, China
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2
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Liu X, Liu G, Fu T, Ding K, Guo J, Wang Z, Xia W, Shangguan H. Structural Design and Energy and Environmental Applications of Hydrogen-Bonded Organic Frameworks: A Systematic Review. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2400101. [PMID: 38647267 PMCID: PMC11165539 DOI: 10.1002/advs.202400101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 03/14/2024] [Indexed: 04/25/2024]
Abstract
Hydrogen-bonded organic frameworks (HOFs) are emerging porous materials that show high structural flexibility, mild synthetic conditions, good solution processability, easy healing and regeneration, and good recyclability. Although these properties give them many potential multifunctional applications, their frameworks are unstable due to the presence of only weak and reversible hydrogen bonds. In this work, the development history and synthesis methods of HOFs are reviewed, and categorize their structural design concepts and strategies to improve their stability. More importantly, due to the significant potential of the latest HOF-related research for addressing energy and environmental issues, this work discusses the latest advances in the methods of energy storage and conversion, energy substance generation and isolation, environmental detection and isolation, degradation and transformation, and biological applications. Furthermore, a discussion of the coupling orientation of HOF in the cross-cutting fields of energy and environment is presented for the first time. Finally, current challenges, opportunities, and strategies for the development of HOFs to advance their energy and environmental applications are discussed.
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Affiliation(s)
- Xiaoming Liu
- Department of Resources and EnvironmentMoutai InstituteRenhuai564507China
| | - Guangli Liu
- College of Environmental Sciences and EngineeringPeking UniversityBeijing100871China
| | - Tao Fu
- College of Environmental Sciences and EngineeringPeking UniversityBeijing100871China
| | - Keren Ding
- AgResearchRuakura Research CentreHamilton3240New Zealand
| | - Jinrui Guo
- College of Environmental Science and EngineeringTongji UniversityShanghai200092China
| | - Zhenran Wang
- School of Environmental Science and EngineeringSouthwest Jiaotong UniversityChengdu611756China
| | - Wei Xia
- Department of Resources and EnvironmentMoutai InstituteRenhuai564507China
| | - Huayuan Shangguan
- Key Laboratory of Urban Environment and HealthInstitute of Urban EnvironmentChinese Academy of SciencesXiamen361021China
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3
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Ma L, Jiang L. Intelligently optimized global analysis of time resolved spectra with particle swarm optimization. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 308:123685. [PMID: 38039640 DOI: 10.1016/j.saa.2023.123685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 11/01/2023] [Accepted: 11/22/2023] [Indexed: 12/03/2023]
Abstract
Time-resolved spectroscopy, especially transient absorption spectroscopy (TAS), provides valuable insights to excited state dynamics. Analyzing TAS data involves fitting complex kinetic traces at various probe wavelengths using different rate equations. Conventional TAS global fitting methods require domain experts to establish physically valid models and provide good initial guesses to generate converged solutions. This poses challenges for non-experts who seek to utilize TAS, thus limiting its broader application and impact. To address this problem, we propose an intelligent optimization framework based on the particle swarm optimization (PSO) algorithm. In the proposed method, the PSO algorithm acts as the global fitting method to find the optimal values of the target variables or unknown parameters in the kinetics models. The target solution is optimized by iteratively updating candidate solutions with respect to an objective feedback signal. We demonstrated the effectiveness of the proposed PSO-based global fitting method with both synthetic and experimental datasets. The results show that our proposed method can successfully find the optimal target values in the global fitting process automatically, thus eliminating the iterative manual labor traditionally required. The proposed intelligent optimization framework provides a novel approach for automatic global fitting of TAS data, which significantly enhances the accessibility and utilization of the TAS methodology.
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Affiliation(s)
- Lin Ma
- School of Physics and Optoelectronic Engineering, Guangdong Provincial Key Laboratory of Information Photonics Technology, Guangdong University of Technology, Guangzhou 510006, China.
| | - Lianlian Jiang
- Institute for Infocomm Research (I2R), Agency for Science, Technology and Research (A*STAR), 1 Fusionopolis Way, #21-01, Connexis South Tower 138632, Singapore.
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4
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Marzano M, D'Errico S, Greco F, Falanga AP, Terracciano M, Di Prisco D, Piccialli G, Borbone N, Oliviero G. Polymorphism of G-quadruplexes formed by short oligonucleotides containing a 3'-3' inversion of polarity: From G:C:G:C tetrads to π-π stacked G-wires. Int J Biol Macromol 2023; 253:127062. [PMID: 37748594 DOI: 10.1016/j.ijbiomac.2023.127062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 09/11/2023] [Accepted: 09/21/2023] [Indexed: 09/27/2023]
Abstract
G-wires are supramolecular DNA structures based on the G-quadruplex (G4) structural motif obtained by the self-assembly of interlocked slipped G-rich oligonucleotide (ON) strands, or by end-to-end stacking of G4 units. Despite the increasing interest towards G-wires due to their potential applications in DNA nanotechnologies, the self-assembly process to obtain G-wires having a predefined length and stability is still neither completely understood nor controlled. In our previous studies, we demonstrated that the d(5'CG2-3'-3'-G2C5') ON, characterized by the presence of a 3'-3'-inversion of polarity site self-assembles into a G-wire structure when annealed in the presence of K+ ions. Herein, by using CD, PAGE, HPLC size exclusion chromatography, and NMR investigations we studied the propensity of shorter analogues having sequences 5'CGn-3'-3'-GmC5' (with n = 1 and 1 ≤ m ≤ 3) to form the corresponding G-quadruplexes and stacked G-wires. The results revealed that the formation of G-wires starting from d(5'CGn-3'-3'-GmC5') ONs is possible only for the sequences having n and m > 1 in which both guanosines flanking the 5'-ending cytosines are not involved into the 3'-3' phosphodiester bond.
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Affiliation(s)
- Maria Marzano
- CESTEV, University of Naples Federico II, Via Tommaso De Amicis 95, 80131 Naples, Italy
| | - Stefano D'Errico
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy
| | - Francesca Greco
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy
| | - Andrea Patrizia Falanga
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy
| | - Monica Terracciano
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy
| | - Daria Di Prisco
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy
| | - Gennaro Piccialli
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy; ISBE-IT, University of Naples Federico II, Corso Umberto I, 80138 Naples, Italy
| | - Nicola Borbone
- Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano 49, 80131 Naples, Italy; ISBE-IT, University of Naples Federico II, Corso Umberto I, 80138 Naples, Italy.
| | - Giorgia Oliviero
- ISBE-IT, University of Naples Federico II, Corso Umberto I, 80138 Naples, Italy; Department of Molecular Medicine and Medical Biotechnologies, University of Naples Federico II, Via Sergio Pansini 5, 80131 Naples, Italy
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Li SH, Li BB, Zhao XL, Wu H, Chai RL, Li GY, Zhu D, He G, Zhang HF, Xie KK, Cheng B, Zhao Q. Macrocycle Self-Assembly Hydrogel for High-Efficient Oil-Water Separation. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2301934. [PMID: 37271893 DOI: 10.1002/smll.202301934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 05/16/2023] [Indexed: 06/06/2023]
Abstract
Supramolecular hydrogels involved macrocycles have been explored widely in recent years, but it remains challenging to develop hydrogel based on solitary macrocycle with super gelation capability. Here, the construction of lantern[33 ]arene-based hydrogel with low critical gelation concentration (0.05 wt%), which can be used for efficient oil-water separation, is reported. The lantern[33 ]arenes self-assemble into hydrogen-bonded organic nanoribbons, which intertwine into entangled fibers to form hydrogel. This hydrogel which exhibits reversible pH-responsiveness characteristics can be coated on stainless-steel mesh by in situ sol-gel transformation. The resultant mesh exhibits excellent oil-water separation efficiency (>99%) and flux (>6 × 104 L m-2 h-1 ). This lantern[33 ]arene-based hydrogel not only sheds additional light on the gelation mechanisms for supramolecular hydrogels, but also extends the application of macrocycle-based hydrogels as functional interfacial materials.
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Affiliation(s)
- Sheng-Hua Li
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Bin-Bin Li
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Xue-Lin Zhao
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Huang Wu
- Department of Chemistry, Northwestern University, Evanston, IL, 60208, USA
| | - Rui-Lin Chai
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Guang-Yue Li
- Department of Applied Chemistry, College of Chemical Engineering, North China University of Science and Technology, Tangshan, 063210, China
| | - Di Zhu
- Tianjin Changlu Advanced Materials Research Institute Co., Ltd., Tianjin, 300350, China
| | - Guangrui He
- Tianjin Changlu Advanced Materials Research Institute Co., Ltd., Tianjin, 300350, China
| | - Hai-Fu Zhang
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Ke-Ke Xie
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
| | - Bowen Cheng
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
- State Key Laboratory of Biobased Fiber Manufacturing Technology, Tianjin University of Science and Technology, Tianjin, 300457, P. R. China
| | - Qian Zhao
- Department of Materials, College of Chemical Engineering and Materials Science, Department of Chemistry, College of Sciences, Tianjin University of Science & Technology, Tianjin, 300457, China
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Liang M, Hu S, Zhou N, Liu Z, Chen Q, Chen X, Liu X, Li CP, Hao J, Xue P. Flexible Luminescent Hydrogen-bonded Organic Framework for the Separation of Benzene and Cyclohexane. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2304340. [PMID: 37323072 DOI: 10.1002/smll.202304340] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Indexed: 06/17/2023]
Abstract
A nonplanar phenothiazine derivative with three cyano moieties (PTTCN) is designed and synthesized to achieve functional crystals for absorptive separation of benzene and cyclohexane. PTTCN can crystallize into two kinds of crystals with different fluorescence colors in different solvent systems. The molecules in two crystals are in different stereo isomeric forms of nitrogen, quasi axial (ax), and quasi equatorial (eq). The crystals with blue fluorescence in ax form may selectively adsorb benzene by a single-crystal-to-single-crystal (SCSC) transformation, but separated benzene from a benzene/cyclohexane equimolar mixture with a low purity of 79.6%. Interestingly, PTTCN molecules with eq form and benzene co-assembled to construct a hydrogen-bonded framework (X-HOF-4) with S-type solvent channels and yellow-green fluorescence, and can release benzene to form nonporous guest-free crystal under heating. Such nonporous crystals strongly favor aromatic benzene over cyclohexane and may selectively reabsorb benzene from benzene/cyclohexane equimolar mixture to recover original framework, and the purity of benzene can reach ≈96.5% after release from framework. Moreover, reversible transformation between the nonporous crystals and the guest-containing crystals allows the material to be reused.
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Affiliation(s)
- Meng Liang
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Siwen Hu
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Ningning Zhou
- School of Chemical Engineering, Qinghai University, Xining, 810016, P. R. China
| | - Zhongyi Liu
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Qiao Chen
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Xinyu Chen
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Xingliang Liu
- School of Chemical Engineering, Qinghai University, Xining, 810016, P. R. China
| | - Cheng-Peng Li
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Jingjun Hao
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
| | - Pengchong Xue
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, College of Chemistry, Tianjin Normal University, No. 393, Binshui West Road, Tianjin, 300387, P. R. China
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Yu L, Wang Y, Sun Y, Tang Y, Xiao Y, Wu G, Peng S, Zhou X. Nanoporous Crystalline Materials for the Recognition and Applications of Nucleic Acids. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023:e2305171. [PMID: 37616525 DOI: 10.1002/adma.202305171] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 08/12/2023] [Indexed: 08/26/2023]
Abstract
Nucleic acid plays a crucial role in countless biological processes. Hence, there is great interest in its detection and analysis in various fields from chemistry, biology, to medicine. Nanoporous crystalline materials exhibit enormous potential as an effective platform for nucleic acid recognition and application. These materials have highly ordered and uniform pore structures, as well as adjustable surface chemistry and pore size, making them good carriers for nucleic acid extraction, detection, and delivery. In this review, the latest developments in nanoporous crystalline materials, including metal organic frameworks (MOFs), covalent organic frameworks (COFs), and supramolecular organic frameworks (SOFs) for nucleic acid recognition and applications are discussed. Different strategies for functionalizing these materials are explored to specifically identify nucleic acid targets. Their applications in selective separation and detection of nucleic acids are highlighted. They can also be used as DNA/RNA sensors, gene delivery agents, host DNAzymes, and in DNA-based computing. Other applications include catalysis, data storage, and biomimetics. The development of novel nanoporous crystalline materials with enhanced biocompatibility has opened up new avenues in the fields of nucleic acid analysis and therapy, paving the way for the development of sensitive, selective, and cost-effective diagnostic and therapeutic tools with widespread applications.
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Affiliation(s)
- Long Yu
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
- Department of Thyroid and Breast Surgery, Zhongnan Hospital of Wuhan University, School of Pharmaceutical Sciences, Wuhan University, Wuhan, 430071, China
- Department of Thyroid and Breast Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China
| | - Yuhao Wang
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
| | - Yuqing Sun
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
| | - Yongling Tang
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
| | - Yuxiu Xiao
- Department of Thyroid and Breast Surgery, Zhongnan Hospital of Wuhan University, School of Pharmaceutical Sciences, Wuhan University, Wuhan, 430071, China
| | - Gaosong Wu
- Department of Thyroid and Breast Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China
| | - Shuang Peng
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
| | - Xiang Zhou
- College of Chemistry and Molecular Sciences, Key Laboratory of Biomedical Polymers-Ministry of Education, Department of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, 430072, China
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8
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Zeng L, Zhang T, Liu R, Tian W, Wu K, Zhu J, Wang Z, He C, Feng J, Guo X, Douka AI, Duan C. Chalcogen-bridged coordination polymer for the photocatalytic activation of aryl halides. Nat Commun 2023; 14:4002. [PMID: 37414824 DOI: 10.1038/s41467-023-39540-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 06/16/2023] [Indexed: 07/08/2023] Open
Abstract
The ability to deliver electrons is vital for dye-based photocatalysts. Conventionally, the aromatic stacking-based charge-transfer complex increases photogenerated electron accessibility but decreases the energy of excited-state dyes. To circumvent this dilemma, here we show a strategy by tuning the stacking mode of dyes. By decorating naphthalene diimide with S-bearing branches, the S···S contact-linked naphthalene diimide string is created in coordination polymer, thereby enhancing electron mobility while simultaneously preserving competent excited-state reducing power. This benefit, along with in situ assembly between naphthalene diimide strings and exogenous reagent/reactant, improves the accessibility of short-lived excited states during consecutive photon excitation, resulting in greater efficiency in photoinduced electron-transfer activation of inert bonds in comparison to other coordination polymers with different dye-stacking modes. This heterogeneous approach is successfully applied in the photoreduction of inert aryl halides and the successive formation of CAr-C/S/P/B bonds with potential pharmaceutical applications.
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Affiliation(s)
- Le Zeng
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Tiexin Zhang
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China.
| | - Renhai Liu
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Wenming Tian
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
| | - Kaifeng Wu
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
| | - Jingyi Zhu
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
| | - Zhonghe Wang
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Cheng He
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Jing Feng
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Xiangyang Guo
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
| | - Abdoulkader Ibro Douka
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China
| | - Chunying Duan
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, School of Chemistry, Dalian University of Technology, Dalian, 116024, China.
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9
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Liu Y, Chang G, Zheng F, Chen L, Yang Q, Ren Q, Bao Z. Hybrid Hydrogen-Bonded Organic Frameworks: Structures and Functional Applications. Chemistry 2023; 29:e202202655. [PMID: 36414543 DOI: 10.1002/chem.202202655] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 11/18/2022] [Accepted: 11/22/2022] [Indexed: 11/24/2022]
Abstract
As a new class of porous crystalline materials, hydrogen-bonded organic frameworks (HOFs) assembled from building blocks by hydrogen bonds have gained increasing attention. HOFs benefit from advantages including mild synthesis, easy purification, and good recyclability. However, some HOFs transform into unstable frameworks after desolvation, which hinders their further applications. Nowadays, the main challenges of developing HOFs lie in stability improvement, porosity establishment, and functionalization. Recently, more and more stable and permanently porous HOFs have been reported. Of all these design strategies, stronger charge-assisted hydrogen bonds and coordination bonds have been proven to be effective for developing stable, porous, and functional solids called hybrid HOFs, including ionic and metallized HOFs. This Review discusses the rational design synthesis principles of hybrid HOFs and their cutting-edge applications in selective inclusion, proton conduction, gas separation, catalysis and so forth.
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Affiliation(s)
- Ying Liu
- Key Laboratory of Biomass Chemical Engineering of, Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, 38 Zheda Road, Hangzhou, Zhejiang Province, 310027, P.R. China
| | - Ganggang Chang
- State Key Laboratory of Advanced Technology for, Materials Synthesis and Processing, School of Chemistry Chemical Engineering and Life Science, Wuhan University of Technology, 122 Luoshi Road, Wuhan, Hubei Province, 430070, P.R. China
| | - Fang Zheng
- Institute of Zhejiang University-Quzhou, 99 Zheda Road, Quzhou, Zhejiang Province, 324000, P.R. China
| | - Lihang Chen
- Institute of Zhejiang University-Quzhou, 99 Zheda Road, Quzhou, Zhejiang Province, 324000, P.R. China
| | - Qiwei Yang
- Key Laboratory of Biomass Chemical Engineering of, Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, 38 Zheda Road, Hangzhou, Zhejiang Province, 310027, P.R. China.,Institute of Zhejiang University-Quzhou, 99 Zheda Road, Quzhou, Zhejiang Province, 324000, P.R. China
| | - Qilong Ren
- Key Laboratory of Biomass Chemical Engineering of, Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, 38 Zheda Road, Hangzhou, Zhejiang Province, 310027, P.R. China.,Institute of Zhejiang University-Quzhou, 99 Zheda Road, Quzhou, Zhejiang Province, 324000, P.R. China
| | - Zongbi Bao
- Key Laboratory of Biomass Chemical Engineering of, Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, 38 Zheda Road, Hangzhou, Zhejiang Province, 310027, P.R. China.,Institute of Zhejiang University-Quzhou, 99 Zheda Road, Quzhou, Zhejiang Province, 324000, P.R. China
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10
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Jiang F, Li B, Wu L. Hydrogen-Bonded Framework of a Polyanionic Cluster and Its Growth from 2D to 3D for Dual-Selective Adsorption and pH-Controlled Oxidation. Inorg Chem 2022; 61:20587-20595. [DOI: 10.1021/acs.inorgchem.2c03436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Affiliation(s)
- Fengrui Jiang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
| | - Bao Li
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
| | - Lixin Wu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
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11
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Yu B, Meng T, Ding X, Liu X, Wang H, Chen B, Zheng T, Li W, Zeng Q, Jiang J. Hydrogen‐Bonded Organic Framework Ultrathin Nanosheets for Efficient Visible‐Light Photocatalytic CO
2
Reduction. Angew Chem Int Ed Engl 2022; 61:e202211482. [DOI: 10.1002/anie.202211482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Indexed: 11/09/2022]
Affiliation(s)
- Baoqiu Yu
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Ting Meng
- CAS Key laboratory of standardization and Measurement for Nanotechnology CAS Center for Excellence in nanoscience National Center for Nanoscience and Technology (NCNST) Beijing 100190 China
| | - Xu Ding
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Xiaolin Liu
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Hailong Wang
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Baotong Chen
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Tianyu Zheng
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Wen Li
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Qingdao Zeng
- CAS Key laboratory of standardization and Measurement for Nanotechnology CAS Center for Excellence in nanoscience National Center for Nanoscience and Technology (NCNST) Beijing 100190 China
| | - Jianzhuang Jiang
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
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12
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Cho SK, Lee KM, Kang SH, Jeong K, Han SP, Lee JE, Lee S, Shin TJ, Ryu JH, Yang C, Kwak SK, Lee SY. Ion slippage through Li +-centered G-quadruplex. SCIENCE ADVANCES 2022; 8:eabp8751. [PMID: 36103528 PMCID: PMC9473610 DOI: 10.1126/sciadv.abp8751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 07/29/2022] [Indexed: 06/15/2023]
Abstract
Single-ion conductors have garnered attention in energy storage systems as a promising alternative to currently widespread electrolytes that allow migration of cations and anions. However, ion transport phenomena of most single-ion conductors are affected by strong ion (e.g., Li+)-ion (immobilized anionic domains) interactions and tortuous paths, which pose an obstacle to achieving performance breakthroughs. Here, we present a Li+-centered G-quadruplex (LiGQ) as a class of single-ion conductor based on directional Li+ slippage at the microscopic level. A guanine derivative with liquid crystalline moieties is self-assembled to form a hexagonal ordered columnar structure in the LiGQ, thereby yielding one-dimensional central channels that provide weak ion-dipole interaction and straightforward ionic pathways. The LiGQ exhibits weak Li+ binding energy and low activation energy for ion conduction, verifying its viability as a new electrolyte design.
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Affiliation(s)
- Seok-Kyu Cho
- Secondary Battery Materials Research Center, Research Institute of Industrial Science and Technology (RIST), 67 Cheongam-ro, Nam-gu, Pohang-si, Gyeongsangbuk-do 37673, Republic of Korea
| | - Kyung Min Lee
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - So-Huei Kang
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
- Department of Chemistry, McGill University, 801 Sherbrooke St West, Montreal, QC H3A 0B8, Canada
| | - Kihun Jeong
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Sun-Phil Han
- UNIST Central Research Facilities (UCRF), Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Ji Eun Lee
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Seungho Lee
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Tae Joo Shin
- UNIST Central Research Facilities (UCRF), Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Ja-Hyoung Ryu
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Changduk Yang
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Sang Kyu Kwak
- Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Sang-Young Lee
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
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13
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Yu B, Meng T, Ding X, Liu X, Wang H, Chen B, Zheng T, Li W, Zeng Q, Jiang J. Hydrogen‐Bonded Organic Framework Ultrathin Nanosheets for Efficient Visible Light Photocatalytic CO2 Reduction. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202211482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Baoqiu Yu
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Ting Meng
- NCNST: National Center for Nanoscience and Technology NCNST Beijing CHINA
| | - Xu Ding
- University of Science and Technology Beijing Chemistry Beijing CHINA
| | - Xiaolin Liu
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Hailong Wang
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Baotong Chen
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Tianyu Zheng
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Wen Li
- University of Science and Technology Beijing Chemistry 100083 Beijing CHINA
| | - Qingdao Zeng
- NCNST: National Center for Nanoscience and Technology NCNST Beijing CHINA
| | - Jianzhuang Jiang
- University of Science and Technology Beijing Chemistry Xueyuan Road 30 100083 Beijing CHINA
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14
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Zhao L, Ahmed F, Xiong H. An excimer ‘ON OFF’ switch based on telomeric G-quadruplex and rGO for trace thrombin detection. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.02.048] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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15
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Sun Y, Fang K, Hu X, Yang J, Jiang Z, Feng L, Li R, Rao Y, Shi S, Dong C. NIR-light-controlled G-quadruplex hydrogel for synergistically enhancing photodynamic therapy via sustained delivery of metformin and catalase-like activity in breast cancer. Mater Today Bio 2022; 16:100375. [PMID: 35983175 PMCID: PMC9379686 DOI: 10.1016/j.mtbio.2022.100375] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2022] [Revised: 07/16/2022] [Accepted: 07/19/2022] [Indexed: 12/27/2022] Open
Abstract
Severely hypoxic condition of tumour represents a notable obstacle against the efficiency of photodynamic therapy (PDT). While mitochondria targeted therapy by metformin has been considered as a promising strategy for reducing oxygen consumption in tumours, its low treatment sensitivity, short half-life and narrow absorption window in vivo remain the intractable challenges. In this report, 5′-guanosine monophosphate (5′GMP), indocyanine green (ICG), hemin and metformin, were combined to construct a smart G-quadruplex (G4) hydrogel named HMI@GEL for breast cancer (BC) treatment. Benefiting from the photothermal (PTT) effect of ICG, HMI@GEL exhibited excellent characteristics of NIR-light-triggered and persistent drug delivery to maintain high intratumoral concentration of metformin. Furthermore, drug loading concentration of metformin reached an amazing 300 mg mL−1 in HMI@GEL. To our knowledge, it might be the highest loading efficiency in the reported literatures. With the combination of catalase-mimicking Hemin@mil88, metformin could inhibit tumour mitochondrial respiratory significantly, which sequentially permitted in situ efficient oxygen generation. Remarkable apoptosis and necrosis were achieved by the combination of PTT and synergistically enhanced PDT as well as the activated tumour immunotherapy. Collectively, the HMI@GEL in situ injectable platform showed a promising strategy for enhanced PDT by metformin, and opened new perspectives for treating BC versatilely. A NIR-light-controlled G-quadruplex hydrogel HMI@GEL loading metformin was prepared for precision breast cancer therapy. The extremely high drug loading capacity (300 mg mL−1) and persistent delivery of metformin was realized for the first time. The combination of catalase-mimicking Hemin@mil88 and metformin dual enhanced intracellular ROS generation. The tumour immune microenvironment was dramatically reshaped by synthetic photodynamic/photothermal therapy.
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Affiliation(s)
- Yanting Sun
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Kang Fang
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Xiaochun Hu
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Jingxian Yang
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Zhengyang Jiang
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Lei Feng
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Ruihao Li
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Yiming Rao
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
| | - Shuo Shi
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
- Corresponding author.
| | - Chunyan Dong
- Department of Oncology, East Hospital Affiliated to Tongji University, School of Medicine, Shanghai Key Laboratory of Chemical Assessment and Sustainability, School of Chemical Science and Engineering, Tongji University, Shanghai 200120, PR China
- Corresponding author.
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16
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Fan Z, Zou Y, Liu C, Xiang S, Zhang Z. Hydrogen‐Bonded Organic Frameworks: Functionalized Construction Strategy by Nitrogen‐Containing Functional Group. Chemistry 2022; 28:e202200422. [DOI: 10.1002/chem.202200422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Indexed: 11/12/2022]
Affiliation(s)
- Zhiwen Fan
- Fujian Provincial Key Laboratory of Polymer Materials College of Chemistry and Materials Science Fujian Normal University 32 Shangsan Road Fuzhou 350007 P. R. China
| | - Yingbing Zou
- Fujian Provincial Key Laboratory of Polymer Materials College of Chemistry and Materials Science Fujian Normal University 32 Shangsan Road Fuzhou 350007 P. R. China
| | - Chulong Liu
- Fujian Provincial Key Laboratory of Polymer Materials College of Chemistry and Materials Science Fujian Normal University 32 Shangsan Road Fuzhou 350007 P. R. China
| | - Shengchang Xiang
- Fujian Provincial Key Laboratory of Polymer Materials College of Chemistry and Materials Science Fujian Normal University 32 Shangsan Road Fuzhou 350007 P. R. China
| | - Zhangjing Zhang
- Fujian Provincial Key Laboratory of Polymer Materials College of Chemistry and Materials Science Fujian Normal University 32 Shangsan Road Fuzhou 350007 P. R. China
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17
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Song X, Wang Y, Wang C, Wang D, Zhuang G, Kirlikovali KO, Li P, Farha OK. Design Rules of Hydrogen-Bonded Organic Frameworks with High Chemical and Thermal Stabilities. J Am Chem Soc 2022; 144:10663-10687. [PMID: 35675383 DOI: 10.1021/jacs.2c02598] [Citation(s) in RCA: 102] [Impact Index Per Article: 51.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Hydrogen-bonded organic frameworks (HOFs), self-assembled from strategically pre-designed molecular tectons with complementary hydrogen-bonding patterns, are rapidly evolving into a novel and important class of porous materials. In addition to their common features shared with other functionalized porous materials constructed from modular building blocks, the intrinsically flexible and reversible H-bonding connections endow HOFs with straightforward purification procedures, high crystallinity, solution processability, and recyclability. These unique advantages of HOFs have attracted considerable attention across a broad range of fields, including gas adsorption and separation, catalysis, chemical sensing, and electrical and optical materials. However, the relatively weak H-bonding interactions within HOFs can potentially limit their stability and potential use in further applications. To that end, this Perspective highlights recent advances in the development of chemically and thermally robust HOF materials and systematically discusses relevant design rules and synthesis strategies to access highly stable HOFs.
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Affiliation(s)
- Xiyu Song
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Yao Wang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Chen Wang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Dong Wang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Guowei Zhuang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Kent O Kirlikovali
- Department of Chemistry, International Institute of Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Peng Li
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
| | - Omar K Farha
- Department of Chemistry, International Institute of Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
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18
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Kang SH, Lee KM, Cho SK, Lee JE, Won D, Lee SY, Kwak SK, Yang C. Guanine-Based G-Quadruplexes Templated by Various Cations toward Potential Use as Single-Ion Conductors. CHEMSUSCHEM 2022; 15:e202102201. [PMID: 34929057 DOI: 10.1002/cssc.202102201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 12/18/2021] [Indexed: 06/14/2023]
Abstract
Inspired by the atomic-sized, shape-regulated features of G-quadruplexes comprising guanine motifs with a monovalent metal cation, the G-quadruplex-forming ability, and properties of a guanine-based π-conjugated Y2 molecule containing bithiophene and peripheral dodecyl chain units in the presence of various cation salts (Li+ , Na+ , K+ , and Mg2+ ) were exploited. A series of structural characterization revealed that Y2 yielded desirable G-quadruplexes with all the tested cations as a consequence of the combination of a hydrogen-bonded cyclic G-quartet, π-stacking, and cation-dipole interactions. The radius and nature of the coordinating cations crucially affected the structural characteristics of G-quadruplexes, leading to variations in the ion migration ability inside the cavity of the G-quadruplex (Li+ >Na+ >K+ >Mg2+ ), as characterized through theoretical and experimental investigations. These results not only improve the understanding of G-quadruplex self-assemblies based on guanine but also provide an impetus for their diverse potential applications, especially in the field of Li batteries.
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Affiliation(s)
- So-Huei Kang
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
- Department of Chemistry, McGill University, 801 Sherbrooke St West, Montreal, QC H3 A 0B8, Canada
| | - Kyung Min Lee
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
| | - Seok-Kyu Cho
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722 (Republic of, Korea
| | - Ji Eun Lee
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
| | - Donghoo Won
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
| | - Sang-Young Lee
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722 (Republic of, Korea
| | - Sang Kyu Kwak
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
| | - Changduk Yang
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Eonyang-eup, Ulju-gun, Ulsan, 44919 (Republic of, Korea
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19
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Milovanović B, Petković M, Etinski M. Alkaline earth cations binding mode tailors excited-state charge transfer properties of guanine quadruplex: A TDDFT study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 267:120584. [PMID: 34794899 DOI: 10.1016/j.saa.2021.120584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2021] [Revised: 10/25/2021] [Accepted: 11/02/2021] [Indexed: 06/13/2023]
Abstract
Quadruplexes formed by nucleic acids and their derivates tend to chelate different monovalent and bivalent cations, which simultaneously affect their excited electronic states properties. Cation binding to every and every other cavity of the central ion channel could be exploited for tuning exited-state charge transfer properties. In this work we utilize set of descriptors constructed on the basis of the one-electron transition density matrix obtained using linear-response TDDFT to study excited states properties of four crystallized tetramolecular quadruplexes that chelate alkaline earth cations (Ca2+, Sr2+ and Ba2+). Here, we show that alkaline earth cations situated at adjacent vacancies promote existence of the nucleobase-metal charge separation (CS) states, contrary to the structures with cations that occupy every second available vacancy. We argued that stabilization of these CS states is due to the strong electric field that stabilizes d orbitals of the cations which accept an excited-electron. Moreover, CS content is increased and redshifted below the first bright transition when number of the chelated cations is increased. Hydration effects stabilized CS states and increased their relative content. We also identified electron detachment states in the broad energy range for the Ca2+ containing system. These findings are valuable for understanding and development of the novel nanostructures based on the quadruplex scaffold with adjustable optical properties.
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Affiliation(s)
- Branislav Milovanović
- University of Belgrade, Faculty of Physical Chemistry, Studentski trg 12-16, Belgrade, Serbia
| | - Milena Petković
- University of Belgrade, Faculty of Physical Chemistry, Studentski trg 12-16, Belgrade, Serbia
| | - Mihajlo Etinski
- University of Belgrade, Faculty of Physical Chemistry, Studentski trg 12-16, Belgrade, Serbia.
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20
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Walunj MB, Srivatsan SG. Heterocycle-modified 2'-Deoxyguanosine Nucleolipid Analogs Stabilize Guanosine Gels and Self-assemble to Form Green Fluorescent Gels. Chem Asian J 2021; 17:e202101163. [PMID: 34817121 DOI: 10.1002/asia.202101163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2021] [Revised: 11/22/2021] [Indexed: 11/08/2022]
Abstract
Nucleoside-lipid conjugates are very useful supramolecular building blocks to construct self-assembled architectures suited for biomedical and material applications. Such nucleoside derivatives can be further synthetically manipulated to endow additional functionalities that could augment the assembling process and impart interesting properties. Here, we report the design, synthesis and self-assembling process of multifunctional supramolecular nucleolipid synthons containing an environment-sensitive fluorescent guanine. The amphiphilic synthons are composed of an 8-(2-(benzofuran-2-yl)vinyl)-guanine core and alkyl chains attached to 3'-O and 5'-O-positions of 2'-deoxyguanosine. The 2-(benzofuran-2-yl)vinyl (BFV) moiety attached at the C8 position of the nucleobase adopted a syn conformation about the glycosidic bond, which facilitated the self-assembly process through the formation of a G-tetrad as the basic unit. While 3',5'-diacylated BFV-modified dG analog stabilized the guanosine hydrogel by hampering the crystallization process and imparted fluorescence, BFV-modified dGs containing longer alkyl chains formed a green fluorescent organogel, which transformed into a yellow fluorescent gel in the presence of a complementary non-fluorescent cytidine nucleolipid. The ability of the dG analog containing short alkyl chains to modulate the mechanical property of a gel, and interesting fluorescence properties and self-assembling behavior exhibited by the dG analogs containing long alkyl chains in response to heat and complementary base underscore the potential use of these new supramolecular synthons in material applications.
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Affiliation(s)
- Manisha B Walunj
- Department of Chemistry, Indian Institute of Science Education and Research (IISER), Pune, Dr. Homi Bhabha Road, Pune, 411008, India
| | - Seergazhi G Srivatsan
- Department of Chemistry, Indian Institute of Science Education and Research (IISER), Pune, Dr. Homi Bhabha Road, Pune, 411008, India
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21
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Fardian-Melamed N, Katrivas L, Rotem D, Kotlyar A, Porath D. Electronic Level Structure of Novel Guanine Octuplex DNA Single Molecules. NANO LETTERS 2021; 21:8987-8992. [PMID: 34694812 DOI: 10.1021/acs.nanolett.1c02269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Throughout the past few decades, guanine quadruplex DNA structures have attracted much interest both from a fundamental material science perspective and from a technologically oriented perspective. Novel guanine octuplex DNA, formed from coiled quadruplex DNA, was recently discovered as a stable and rigid DNA-based nanostructure. A detailed electronic structure study of this new nanomaterial, performed by scanning tunneling spectroscopy on a subsingle-molecule level at cryogenic temperature, is presented herein. The electronic levels and lower energy gap of guanine octuplex DNA compared to quadruplex DNA dictate higher transverse conductivity through guanine octads than through guanine tetrads.
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Affiliation(s)
- Natalie Fardian-Melamed
- Institute of Chemistry and The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Liat Katrivas
- Department of Biochemistry and Molecular Biology, George S. Wise Faculty of Life Sciences, and The Center of Nanoscience and Nanotechnology, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Dvir Rotem
- Institute of Chemistry and The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Alexander Kotlyar
- Department of Biochemistry and Molecular Biology, George S. Wise Faculty of Life Sciences, and The Center of Nanoscience and Nanotechnology, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Danny Porath
- Institute of Chemistry and The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
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22
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Milovanović B, Etinski M, Popov I. Self-assembly of rylene-decorated guanine ribbons on graphene surface for optoelectronic applications: a theoretical study. NANOTECHNOLOGY 2021; 32:435405. [PMID: 34284367 DOI: 10.1088/1361-6528/ac162c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 07/20/2021] [Indexed: 06/13/2023]
Abstract
We are witnessing a change of paradigm from the conventional top-down to the bottom-up fabrication of nanodevices and particularly optoelectronic devices. A promising example of the bottom-up approach is self-assembling of molecules into layers with predictable and reproducible structural, electronic and optical properties. Nucleobases possess extraordinary ability to self-assembly into one-, two-, and three-dimensional structures. Optical properties of nucleotides are not suitable for wider application to optoelectronics and photovoltaics due to their large optical band gap, which is in contrast to rylene-based dyes that have been intensively investigated in organic optoelectronics. However, these lack the self-assembly capability of nucleobases. Combinations of covalently decorated guanine molecules with rylene type chromophores present 'the best of the both worlds'. Due to the large size of such compounds and its flexible nature their self-assemblies have not been fully understood yet. Here, we use a theoretical approach to study the structural, energetic and optical properties of rylene-based dye decorated guanine (GPDI), as self-assembled on a graphene sheet. Particularly we utilize the density-functional based tight-binding method to study atomic structure of these systems including the potential energy surface of GPDI and stability and organization of single- and multilayered GPDIs on graphene sheet. Using density-functional theory (DFT) we employ the energy decomposition analysis to gain a deeper insight into the contributions of different moieties to stability of GPDI films. Using time dependent DFT we analyze optical properties of these systems. We find that atomically thin films consisting of only a few molecular layers with large surface areas are more favorable than isolated thick islands. Our study of excited states indicates existence of charge separated states similar to ones found in the well-studied hydrogen bonded organic frameworks. The self-assembly characterized with a large homogeneous coverage and long-living charge-separated states provide the great potential for optoelectronic applications.
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Affiliation(s)
- Branislav Milovanović
- University of Belgrade, Faculty of Physical Chemistry, Studentski trg 12-16, Belgrade, Serbia
| | - Mihajlo Etinski
- University of Belgrade, Faculty of Physical Chemistry, Studentski trg 12-16, Belgrade, Serbia
| | - Igor Popov
- Institute for Multidisciplinary Research, University of Belgrade, Kneza Višeslava 1, Belgrade, Serbia
- Institut of Physics, University of Belgrade, Pregrevica 118, Belgrade, Serbia
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23
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Bhosale SV, Al Kobaisi M, Jadhav RW, Morajkar PP, Jones LA, George S. Naphthalene diimides: perspectives and promise. Chem Soc Rev 2021; 50:9845-9998. [PMID: 34308940 DOI: 10.1039/d0cs00239a] [Citation(s) in RCA: 79] [Impact Index Per Article: 26.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
In this review, we describe the developments in the field of naphthalene diimides (NDIs) from 2016 to the presentday. NDIs are shown to be an increasingly interesting class of molecules due to their electronic properties, large electron deficient aromatic cores and tendency to self-assemble into functional structures. Almost all NDIs possess high electron affinity, good charge carrier mobility, and excellent thermal and oxidative stability, making them promising candidates for applications in organic electronics, photovoltaic devices, and flexible displays. NDIs have also been extensively studied due to their potential real-world uses across a wide variety of applications including supramolecular chemistry, sensing, host-guest complexes for molecular switching devices, such as catenanes and rotaxanes, ion-channels, catalysis, and medicine and as non-fullerene accepters in solar cells. In recent years, NDI research with respect to supramolecular assemblies and mechanoluminescent properties has also gained considerable traction. Thus, this review will assist a wide range of readers and researchers including chemists, physicists, biologists, medicinal chemists and materials scientists in understanding the scope for development and applicability of NDI dyes in their respective fields through a discussion of the main properties of NDI derivatives and of the status of emerging applications.
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Affiliation(s)
- Sheshanath V Bhosale
- School of Chemical Sciences, Goa University, Taleigao Plateau, Goa-403 206, India.
| | - Mohammad Al Kobaisi
- Centre for Advanced Materials and Industrial Chemistry (CAMIC), School of Science, RMIT University, GPO Box 2476, Melbourne, Victoria 3001, Australia
| | - Ratan W Jadhav
- School of Chemical Sciences, Goa University, Taleigao Plateau, Goa-403 206, India.
| | - Pranay P Morajkar
- School of Chemical Sciences, Goa University, Taleigao Plateau, Goa-403 206, India.
| | - Lathe A Jones
- Centre for Advanced Materials and Industrial Chemistry (CAMIC), School of Science, RMIT University, GPO Box 2476, Melbourne, Victoria 3001, Australia
| | - Subi George
- New Chemistry Unit (NCU), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur PO, Bangalore-560064, India
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24
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Hou L, Shan C, Song Y, Chen S, Wojtas L, Ma S, Sun Q, Zhang L. Highly Stable Single Crystals of Three-Dimensional Porous Oligomer Frameworks Synthesized under Kinetic Conditions. Angew Chem Int Ed Engl 2021; 60:14664-14670. [PMID: 33857349 DOI: 10.1002/anie.202103729] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Indexed: 11/08/2022]
Abstract
Various robust, crystalline, and porous organic frameworks based on in situ-formed imine-linked oligomers were investigated. These oligomers self-assembled through collaborative intermolecular hydrogen bonding interactions via liquid-liquid interfacial reactions. The soluble oligomers were kinetic products with multiple unreacted aldehyde groups that acted as hydrogen bond donors and acceptors and directed the assembly of the resulting oligomers into 3D frameworks. The sequential formation of robust covalent linkages and highly reversible hydrogen bonds enforced long-range symmetry and facilitated the production of large single crystals, with structures that were unambiguously determined by single-crystal X-ray diffraction. The unique hierarchical arrangements increased the steric hindrance of the imine bond, which prevented attacks from water molecules, greatly improving the stability. The multiple binding sites in the frameworks enabled rapid sequestration of micropollutant in water.
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Affiliation(s)
- Linxiao Hou
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Chuan Shan
- Department of Chemistry, University of South Florida, 4202 E. Fowler Avenue, Tampa, FL, 33620, USA
| | - Yanpei Song
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, TX, 76201, USA
| | - Sifan Chen
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Lukasz Wojtas
- Department of Chemistry, University of South Florida, 4202 E. Fowler Avenue, Tampa, FL, 33620, USA
| | - Shengqian Ma
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, TX, 76201, USA
| | - Qi Sun
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Lin Zhang
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China
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25
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di Nunzio MR, Hisaki I, Douhal A. HOFs under light: Relevance to photon-based science and applications. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C: PHOTOCHEMISTRY REVIEWS 2021. [DOI: 10.1016/j.jphotochemrev.2021.100418] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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26
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Hou L, Shan C, Song Y, Chen S, Wojtas L, Ma S, Sun Q, Zhang L. Highly Stable Single Crystals of Three‐Dimensional Porous Oligomer Frameworks Synthesized under Kinetic Conditions. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202103729] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Linxiao Hou
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Chuan Shan
- Department of Chemistry University of South Florida 4202 E. Fowler Avenue Tampa FL 33620 USA
| | - Yanpei Song
- Department of Chemistry University of North Texas 1508 W Mulberry St Denton TX 76201 USA
| | - Sifan Chen
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Lukasz Wojtas
- Department of Chemistry University of South Florida 4202 E. Fowler Avenue Tampa FL 33620 USA
| | - Shengqian Ma
- Department of Chemistry University of North Texas 1508 W Mulberry St Denton TX 76201 USA
| | - Qi Sun
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Lin Zhang
- Zhejiang Provincial Key Laboratory of Advanced Chemical Engineering Manufacture Technology College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
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27
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Yu B, Li L, Liu S, Wang H, Liu H, Lin C, Liu C, Wu H, Zhou W, Li X, Wang T, Chen B, Jiang J. Robust Biological Hydrogen‐Bonded Organic Framework with Post‐Functionalized Rhenium(I) Sites for Efficient Heterogeneous Visible‐Light‐Driven CO
2
Reduction. Angew Chem Int Ed Engl 2021; 60:8983-8989. [DOI: 10.1002/anie.202016710] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 01/22/2021] [Indexed: 12/14/2022]
Affiliation(s)
- Baoqiu Yu
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Lianjie Li
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Shanshan Liu
- School of Materials Science and Engineering China University of Petroleum (East China) Qingdao 266580 China
| | - Hailong Wang
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Heyuan Liu
- School of Materials Science and Engineering China University of Petroleum (East China) Qingdao 266580 China
| | - Chenxiang Lin
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Chao Liu
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Hui Wu
- Center for Neutron Research National Institute of Standards and Technology Gaithersburg MD 20899-6102 USA
| | - Wei Zhou
- Center for Neutron Research National Institute of Standards and Technology Gaithersburg MD 20899-6102 USA
| | - Xiyou Li
- School of Materials Science and Engineering China University of Petroleum (East China) Qingdao 266580 China
| | - Tianyu Wang
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
| | - Banglin Chen
- Department of Chemistry University of Texas at San Antonio San Antonio TX 78249-0698 USA
| | - Jianzhuang Jiang
- Beijing Advanced Innovation Center for Materials Genome Engineering Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials Department of Chemistry and Chemical Engineering School of Chemistry and Biological Engineering University of Science and Technology Beijing Beijing 100083 China
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28
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Robust Biological Hydrogen‐Bonded Organic Framework with Post‐Functionalized Rhenium(I) Sites for Efficient Heterogeneous Visible‐Light‐Driven CO
2
Reduction. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202016710] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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29
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Martín-Arroyo M, Castells-Gil J, Bilbao N, Almora-Barrios N, Martí-Gastaldo C, González-Rodríguez D. Crystalline supramolecular organic frameworks via hydrogen-bonding between nucleobases. Chem Commun (Camb) 2021; 57:1659-1662. [DOI: 10.1039/d0cc07707k] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
We describe here the first crystalline hydrogen-bonded organic framework made from complementary guanine and cytosine nucleobases.
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Affiliation(s)
- Miguel Martín-Arroyo
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
- Spain
| | | | - Nerea Bilbao
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
- Spain
| | | | | | - David González-Rodríguez
- Departamento de Química Orgánica
- Facultad de Ciencias
- Universidad Autónoma de Madrid
- 28049 Madrid
- Spain
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30
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Wei L, Han ST, Jin TT, Zhan TG, Liu LJ, Cui J, Zhang KD. Towards photoswitchable quadruple hydrogen bonds via a reversible "photolocking" strategy for photocontrolled self-assembly. Chem Sci 2020; 12:1762-1771. [PMID: 34163937 PMCID: PMC8179285 DOI: 10.1039/d0sc06141g] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Accepted: 11/30/2020] [Indexed: 02/05/2023] Open
Abstract
Developing new photoswitchable noncovalent interaction motifs with controllable bonding affinity is crucial for the construction of photoresponsive supramolecular systems and materials. Here we describe a unique "photolocking" strategy for realizing photoswitchable control of quadruple hydrogen-bonding interactions on the basis of modifying the ureidopyrimidinone (UPy) module with an ortho-ester substituted azobenzene unit as the "photo-lock". Upon light irradiation, the obtained Azo-UPy motif is capable of unlocking/locking the partial H-bonding sites of the UPy unit, leading to photoswitching between homo- and heteroquadruple hydrogen-bonded dimers, which has been further applied for the fabrication of novel tunable hydrogen bonded supramolecular systems. This "photolocking" strategy appears to be broadly applicable in the rational design and construction of other H-bonding motifs with sufficiently photoswitchable noncovalent interactions.
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Affiliation(s)
- Lu Wei
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Shi-Tao Han
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Ting-Ting Jin
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Tian-Guang Zhan
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Li-Juan Liu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Jiecheng Cui
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
| | - Kang-Da Zhang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, College of Chemistry and Life Science, Zhejiang Normal University 688 Yingbin Road Jinhua 321004 China
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31
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Powers-Riggs NE, Zuo X, Young RM, Wasielewski MR. Solvent independent symmetry-breaking charge separation in terrylenediimide guanine-quadruplex nanoparticles. J Chem Phys 2020; 153:204302. [DOI: 10.1063/5.0027471] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Affiliation(s)
- Natalia E. Powers-Riggs
- Department of Chemistry and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, USA
| | - Xiaobing Zuo
- X-ray Science Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - Ryan M. Young
- Department of Chemistry and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, USA
| | - Michael R. Wasielewski
- Department of Chemistry and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, USA
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32
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Hao X, Wang C, Wang Y, Li C, Hou J, Zhang F, Kang C, Gao L. Topological conversion of human telomeric G-quadruplexes from hybrid to parallel form induced by naphthalene diimide ligands. Int J Biol Macromol 2020; 167:1048-1058. [PMID: 33188810 DOI: 10.1016/j.ijbiomac.2020.11.059] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 11/09/2020] [Accepted: 11/09/2020] [Indexed: 12/17/2022]
Abstract
G-quadruplexes (GQs) have become promising anti-cancer therapeutic targets, which are formed by the folding of a guanine-rich repeat DNA/RNA sequence at human telomeres or oncogene promoters. Polymorphism has been observed for the folding topologies of intramolecular GQs. Here we report the topological conversion of human telomeric GQ induced by naphthalene diimide (NDI) ligands in K+ solution. The ligands selectively induce metastable hybrid-type GQs to highly stable parallel-type GQ at physiological temperature (37 °C) in dilute aqueous solutions and under crowding conditions that mimic cellular bioenvironment. According to spectroscopic analyses, the topological conversion is speculated to undergo stepwise unfolding of hybrid-type GQ through intermediate states to parallel-type GQ. The results will prompt further studies on the designs of ligands with GQ conformation regulation functions and nanotechnological systems based on nucleic acids with dynamic regulation of GQ conformation.
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Affiliation(s)
- Xueyu Hao
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China; University of Science and Technology of China, Hefei 230026, China
| | - Chunyu Wang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Changchun 130012, China
| | - Yu Wang
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China; University of Science and Technology of China, Hefei 230026, China
| | - Chunjie Li
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China
| | - Jingwei Hou
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China
| | - Feng Zhang
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China
| | - Chuanqing Kang
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China; University of Science and Technology of China, Hefei 230026, China.
| | - Lianxun Gao
- Laboratory of Polymer Composite and Engineering, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, China
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33
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Liu T, Wang B, He R, Arman H, Schanze KS, Xiang S, Li D, Chen B. A novel hydrogen-bonded organic framework for the sensing of two representative organic arsenics. CAN J CHEM 2020. [DOI: 10.1139/cjc-2019-0417] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A novel fluorescent hydrogen-bonded organic framework with a double fold interpenetrated structure, HOF-22, has been successfully constructed and structurally characterized. HOF-22 is capable of sensitive detection of two representative organic arsenics from aqueous solution.
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Affiliation(s)
- Ting Liu
- College of Chemistry and Materials Science, Jinan University, Guangzhou 510632, P.R. China
- Department of Chemistry, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249-0698, USA
| | - Bin Wang
- Department of Chemistry, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249-0698, USA
- Fujian Provincial Key Laboratory of Polymer Materials, College of Chemistry and Materials Science, Fujian Normal University, 32 Shangsan Road, Fuzhou 350007, P.R. China
| | - Ru He
- Department of Chemistry, University of Florida, Gainesville, FL 32611, USA
| | - Hadi Arman
- Department of Chemistry, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249-0698, USA
| | - Kirk S. Schanze
- Department of Chemistry, University of Florida, Gainesville, FL 32611, USA
| | - Shengchang Xiang
- Fujian Provincial Key Laboratory of Polymer Materials, College of Chemistry and Materials Science, Fujian Normal University, 32 Shangsan Road, Fuzhou 350007, P.R. China
| | - Dan Li
- College of Chemistry and Materials Science, Jinan University, Guangzhou 510632, P.R. China
| | - Banglin Chen
- Department of Chemistry, University of Texas at San Antonio, 1 UTSA Circle, San Antonio, TX 78249-0698, USA
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34
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Pal C, Chakraborty TK. Development of Minimal Diguanosinyl Motif toward RNA G-Quadruplex-Like Structures in Solution. Chembiochem 2020; 21:1837-1842. [PMID: 31995269 DOI: 10.1002/cbic.202000002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Indexed: 11/05/2022]
Abstract
Among the non-canonical structures of B-DNA, the G-quadruplex is of particular interest because of its well-defined conformation, high stability, and versatility. Herein we report our studies on the development of an amide-linked minimal diguanosinyl motif that forms a G-quadruplex-like structure in solution in the presence of potassium cations; various linear guanosine amino acid dimers were synthesized with linkers of different chain lengths to investigate the optimum flexibility required to form such structures.
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Affiliation(s)
- Chandan Pal
- Department of Organic Chemistry, Indian Institute of Science, Bengaluru, 560012, Karnataka, India
| | - Tushar Kanti Chakraborty
- Department of Organic Chemistry, Indian Institute of Science, Bengaluru, 560012, Karnataka, India
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35
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Martín‐Arroyo M, Prado A, Chamorro R, Bilbao N, González‐Rodríguez D. Elucidating Noncovalent Reaction Mechanisms: G‐Quartet as an Intermediate in G‐Quadruplex Assembly. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201916261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Miguel Martín‐Arroyo
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Anselmo Prado
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Raquel Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Nerea Bilbao
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - David González‐Rodríguez
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
- Institute for Advanced Research in Chemical Sciences (IAdChem) Universidad Autónoma de Madrid 28049 Madrid Spain
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36
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Martín-Arroyo M, Del Prado A, Chamorro R, Bilbao N, González-Rodríguez D. Elucidating Noncovalent Reaction Mechanisms: G-Quartet as an Intermediate in G-Quadruplex Assembly. Angew Chem Int Ed Engl 2020; 59:9041-9046. [PMID: 32125063 DOI: 10.1002/anie.201916261] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 02/17/2020] [Indexed: 12/20/2022]
Abstract
In analogy to covalent reactions, the understanding of noncovalent association pathways is fundamental to influence and control any supramolecular process. Following an approach that is reminiscent of covalent methodologies, we study here, for the first time, the mechanism of G-quadruplex formation in organic solvents. Our results support a reaction pathway in which the cation shifts the equilibrium towards a G-quartet transient intermediate, which then acts as a template in the formation of the G-quadruplex product.
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Affiliation(s)
- Miguel Martín-Arroyo
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - Anselmo Del Prado
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - Raquel Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - Nerea Bilbao
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - David González-Rodríguez
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049, Madrid, Spain.,Institute for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid, 28049, Madrid, Spain
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37
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Lee C, Choi YK, Lee S, Han SY. Hydrogen bonding influences collision-induced dissociation of Na + -bound guanine tetrads. JOURNAL OF MASS SPECTROMETRY : JMS 2020; 56:e4582. [PMID: 33085179 DOI: 10.1002/jms.4582] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Revised: 05/25/2020] [Accepted: 05/27/2020] [Indexed: 06/11/2023]
Abstract
Na+ -bound guanine (G)-tetrads possess square planar structures formed solely by noncovalent interactions including multiple hydrogen bonds. Unlike G-tetrads facilitated by other alkali metal ions, an intriguing behavior in collision-induced dissociation (CID) has been observed in Na+ -bound G-tetrads, which features a preferential, simultaneous loss of two G ligands in the low energy regime. To understand this unique behavior, we investigated the CID of Na+ -bound G-tetrads with mixed ligands of G and 9-methylguanine (9mG), [Na·Gm ·9mGn ]+ (m + n = 4), and [Li·9mG4 ]+ for comparison. In the CID experiments, the simultaneous losses of two ligands were by far more pronounced than the loss of a single ligand for all five Na+ -bound G-tetrads. However, it appeared that the CID of [Li·9mG4 ]+ prefers to lose single ligands sequentially. An analysis of the fragment abundances suggested that the generation of Na+ -bound dimeric fragments might have occurred with two adjacent ligands. This theoretical study predicted for [Li·9mG4 ]+ that the loss of a single ligand is more energetically favorable than the production of neutral hydrogen-bonded fragments by 35.5 kJ/mol (ΔG). This contradicts our previous calculations for [Na·9mG4 ]+ that a neutral loss of hydrogen-bonded dimers provides the lowest energy product state of Na+ -bound dimeric fragments, which is lower than that of Na+ -bound trimeric fragments by 15.6 kJ/mol. From the results, this comparative study suggests that the pronounced generation of Na+ -bound dimeric fragments in CID of the G-tetrads is likely promoted by the dissociation pathway associated with neutral loss of hydrogen-bonded dimers. It thus demonstrates that multiple hydrogen bonding participating in formation of Na+ -bound G-tetrads may also strongly influence the fate of dissociating complexes of G-tetrads.
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Affiliation(s)
- Chaewon Lee
- Department of Chemistry, Gachon University, Seongnam-si, Republic of Korea
| | - Yoon Kyung Choi
- Department of Chemistry, Gachon University, Seongnam-si, Republic of Korea
| | - Sanghun Lee
- Department of Chemistry, Gachon University, Seongnam-si, Republic of Korea
| | - Sang Yun Han
- Department of Chemistry, Gachon University, Seongnam-si, Republic of Korea
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38
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Self‐Assembly of DNA and RNA Building Blocks Explored by Nitrogen‐14 NMR Crystallography: Structure and Dynamics. Chemphyschem 2020; 21:1044-1051. [DOI: 10.1002/cphc.201901214] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 03/18/2020] [Indexed: 12/20/2022]
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del Prado A, González‐Rodríguez D, Wu Y. Functional Systems Derived from Nucleobase Self-assembly. ChemistryOpen 2020; 9:409-430. [PMID: 32257750 PMCID: PMC7110180 DOI: 10.1002/open.201900363] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Revised: 03/05/2020] [Indexed: 12/12/2022] Open
Abstract
Dynamic and reversible non-covalent interactions endow synthetic systems and materials with smart adaptive functions that allow them to response to diverse stimuli, interact with external agents, or repair structural defects. Inspired by the outstanding performance and selectivity of DNA in living systems, scientists are increasingly employing Watson-Crick nucleobase pairing to control the structure and properties of self-assembled materials. Two sets of complementary purine-pyrimidine pairs (guanine:cytosine and adenine:thymine(uracil)) are available that provide selective and directional H-bonding interactions, present multiple metal-coordination sites, and exhibit rich redox chemistry. In this review, we highlight several recent examples that profit from these features and employ nucleobase interactions in functional systems and materials, covering the fields of energy/electron transfer, charge transport, adaptive nanoparticles, porous materials, macromolecule self-assembly, or polymeric materials with adhesive or self-healing ability.
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Affiliation(s)
- Anselmo del Prado
- Departamento de Química OrgánicaFacultad de CienciasUniversidad Autónoma de Madrid28049MadridSpain
| | - David González‐Rodríguez
- Departamento de Química OrgánicaFacultad de CienciasUniversidad Autónoma de Madrid28049MadridSpain
- Institute for Advanced Research in Chemical Sciences (IAdChem)Universidad Autónoma de Madrid28049MadridSpain
| | - Yi‐Lin Wu
- School of ChemistryCardiff UniversityPark PlaceCardiffCF10 3ATUK
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40
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Shea JJ, Luo C. Organic Electrode Materials for Metal Ion Batteries. ACS APPLIED MATERIALS & INTERFACES 2020; 12:5361-5380. [PMID: 31917538 DOI: 10.1021/acsami.9b20384] [Citation(s) in RCA: 98] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Organic and polymer materials have been extensively investigated as electrode materials for rechargeable batteries because of the low cost, abundance, environmental benignity, and high sustainability. To date, organic electrode materials have been applied in a large variety of energy storage devices, including nonaqueous Li-ion, Na-ion, K-ion, dual-ion, multivalent-metal, aqueous, all-solid-state, and redox flow batteries, because of the universal properties of organic electrode materials. Moreover, some organic materials enable the batteries to be operated in the extreme conditions, such as a wide temperature range (-70 to 150 °C), a wide pH range, and in the presence of O2. As a guidance for the research in organic batteries, this Review focuses on the reaction mechanisms and applications of organic electrode materials. Six categories of reaction mechanisms and the applications of organic and polymer materials in various rechargeable batteries are discussed to provide an overview of the state-of-the-art organic batteries.
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Affiliation(s)
- John J Shea
- Department of Chemistry and Biochemistry , George Mason University , Fairfax , Virginia 22030 , United States
| | - Chao Luo
- Department of Chemistry and Biochemistry , George Mason University , Fairfax , Virginia 22030 , United States
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41
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Wang Q, Xu X, Yang G, Liu Y, Yao X. An organic cathode with tailored working potential for aqueous Zn-ion batteries. Chem Commun (Camb) 2020; 56:11859-11862. [DOI: 10.1039/d0cc05344a] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Up to 0.61 V increase in the working potential was achieved by modifying the anthraquinone (AQ) molecular structure with a stronger electron-withdrawing cyano group.
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Affiliation(s)
- Quan Wang
- Jiangsu Laboratory of Advanced Functional Material
- Changshu Institute of Technology
- School of Materials Engineering
- Changshu 215500
- China
| | - Xingyan Xu
- Jiangsu Laboratory of Advanced Functional Material
- Changshu Institute of Technology
- School of Materials Engineering
- Changshu 215500
- China
| | - Gang Yang
- Jiangsu Laboratory of Advanced Functional Material
- Changshu Institute of Technology
- School of Materials Engineering
- Changshu 215500
- China
| | - Yu Liu
- Department of Chemical Engineering and Waterloo Institute of Nanotechnology
- University of Waterloo
- Waterloo
- Canada
| | - Xiaxi Yao
- Jiangsu Laboratory of Advanced Functional Material
- Changshu Institute of Technology
- School of Materials Engineering
- Changshu 215500
- China
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42
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Ma C, Chan RCT, Chan CTL, Wong AKW, Kwok WM. Real-time Monitoring Excitation Dynamics of Human Telomeric Guanine Quadruplexes: Effect of Folding Topology, Metal Cation, and Confinement by Nanocavity Water Pool. J Phys Chem Lett 2019; 10:7577-7585. [PMID: 31769690 DOI: 10.1021/acs.jpclett.9b02932] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Guanine(G)-rich human telomeric (HT) DNA repeats, crucial to maintenance of genome stability, readily form G-quadruplexes (GQs) with various folding topologies. Research on excitation dynamics of HT-GQs is, however, scarce. Herein, we report a femtosecond time-resolved fluorescence coupled with transient absorption investigation on HT-GQ with the basket-type structure in Na+ solution. The result unveils an unusual multichannel nonradiative mechanism dominated by states with varying character of charge transfer lasting ten and hundreds of picoseconds, accounting altogether for an overwhelming ∼85% of the overall deactivation involving proton transfer. Our comparative study shows that encapsulating the GQ in nanocavity water pool or changing it into hydrid-type topologies with the presence of K+ ions alter differently energies and lifetimes of these states, yet without affecting the nature of the electronic excitation involved. The finding of this work underscores a leading role of structural rigidity in regulating the interplay with the microenvironment of photoexcited monomolecularly folded HT-GQs.
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Affiliation(s)
- Chensheng Ma
- College of Chemistry and Environmental Engineering , Shenzhen University , Shenzhen , Guangdong P. R. China
| | - Ruth C-T Chan
- College of Chemistry and Environmental Engineering , Shenzhen University , Shenzhen , Guangdong P. R. China
| | - Chris T-L Chan
- College of Chemistry and Environmental Engineering , Shenzhen University , Shenzhen , Guangdong P. R. China
| | - Allen K-W Wong
- Department of Applied Biology and Chemical Technology , The Hong Kong Polytechnic University , Hung Hom, Kowloon , Hong Kong , P. R. China
| | - Wai-Ming Kwok
- Department of Applied Biology and Chemical Technology , The Hong Kong Polytechnic University , Hung Hom, Kowloon , Hong Kong , P. R. China
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43
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Liu C, Niazi MR, Perepichka DF. Strong Enhancement of π‐Electron Donor/Acceptor Ability by Complementary DD/AA Hydrogen Bonding. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201910288] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Cheng‐Hao Liu
- Department of ChemistryMcGill University 801 Sherbrooke Street W Quebec H3A 0B1 Canada
| | - Muhammad Rizwan Niazi
- Department of ChemistryMcGill University 801 Sherbrooke Street W Quebec H3A 0B1 Canada
| | - Dmitrii F. Perepichka
- Department of ChemistryMcGill University 801 Sherbrooke Street W Quebec H3A 0B1 Canada
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44
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Liu CH, Niazi MR, Perepichka DF. Strong Enhancement of π-Electron Donor/Acceptor Ability by Complementary DD/AA Hydrogen Bonding. Angew Chem Int Ed Engl 2019; 58:17312-17321. [PMID: 31560447 DOI: 10.1002/anie.201910288] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Indexed: 11/11/2022]
Abstract
π-Conjugated organic materials possess a wide range of tunable optoelectronic properties which are dictated by their molecular structure and supramolecular arrangement. While many efforts have been put into tuning the molecular structure to achieve the desired properties, rational supramolecular control remains a challenge. Here, we report a novel series of supramolecular materials formed by the co-assembly of weak π-electron donor (indolo[2,3-a]carbazole) and acceptor (aromatic o-quinones) molecules via complementary hydrogen bonding. The resulting polarization creates a drastic perturbation of the molecular energy levels, causing strong charge transfer in the weak donor-acceptor pairs. This leads to a significant lowering (up to 1.5 eV) of the band gaps, intense absorption in the near-IR region, very short π-stacking distances (≥3.15 Å), and strong ESR signals in the co-crystals. By varying the strength of the acceptor, the characteristics of the complexes can be tuned between intrinsic, gate-, or light-induced semiconductivity with a p-type or ambipolar transport mechanism.
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Affiliation(s)
- Cheng-Hao Liu
- Department of Chemistry, McGill University, 801 Sherbrooke Street W, Quebec, H3A 0B1, Canada
| | - Muhammad Rizwan Niazi
- Department of Chemistry, McGill University, 801 Sherbrooke Street W, Quebec, H3A 0B1, Canada
| | - Dmitrii F Perepichka
- Department of Chemistry, McGill University, 801 Sherbrooke Street W, Quebec, H3A 0B1, Canada
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Khodja W, Collière V, Kahn ML, Roques N, Sutter JP. Controlled Growth of Ag Nanocrystals in a H-Bonded Open Framework. Chemistry 2019; 25:13705-13708. [PMID: 31448835 DOI: 10.1002/chem.201903684] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Indexed: 01/07/2023]
Abstract
A procedure that enabled rational access to the first example of hybrid material made of NPs grown within a H-bonded framework is reported. To avoid competitive reactions with the framework units, the metal precursor was chemically trapped in the porous structure and subsequently photo-reduced to afford the hybrid material Ag@SPA-2, which consists of Ag NPs of nanometric sizes (<15 nm) homogeneously distributed in the crystals of the host material. In a subsequent step, taking advantage of the porous matrix the silver NPs have been transformed in situ to Ag2 S NP by simple infiltration of H2 S. The supramolecular network is shown to play an important role in stabilizing the inorganic nanomaterials and thus in controlling their growth.
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Affiliation(s)
- Walid Khodja
- Laboratoire de Chime de Coordination, CNRS, Université de Toulouse, 205 route de Narbonne, 31077, Toulouse, France
| | - Vincent Collière
- Laboratoire de Chime de Coordination, CNRS, Université de Toulouse, 205 route de Narbonne, 31077, Toulouse, France
| | - Myrtil L Kahn
- Laboratoire de Chime de Coordination, CNRS, Université de Toulouse, 205 route de Narbonne, 31077, Toulouse, France
| | - Nans Roques
- Laboratoire de Chime de Coordination, CNRS, Université de Toulouse, 205 route de Narbonne, 31077, Toulouse, France
| | - Jean-Pascal Sutter
- Laboratoire de Chime de Coordination, CNRS, Université de Toulouse, 205 route de Narbonne, 31077, Toulouse, France
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46
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A Gold Quartet Framework with Reversible Anisotropic Structural Transformation Accompanied by Luminescence Response. Chem 2019. [DOI: 10.1016/j.chempr.2019.06.012] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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47
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Chu IT, Tseng TY, Chang TC. Comparison and Elucidation of Structural Diversity and Variation of G-Rich Sequences with a Single G-Base Difference. J Phys Chem B 2019; 123:5423-5431. [PMID: 31244100 DOI: 10.1021/acs.jpcb.9b02956] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Previously, we found the structural diversity of a mitochondrial sequence mt10251 (GGGTGGGAGTAGTTCCCTGCTAAGGGAGGG), including coexistence of a hairpin structure and monomeric, dimeric, and tetrameric G4 structures in 20 mM K+ solution. Moreover, a single-base mutation of mt10251 could cause significant changes in terms of structural populations and polymorphism. In this work, we investigate the diverse G4 topologies of mt10251 and structural variation of its mutants. Using circular dichroism (CD), nuclear magnetic resonance (NMR), and polyacrylamide gel electrophoresis (PAGE), we first illustrate an unusual tetrameric G4 structure together with hairpin bulges formed by four strands of mt10251-d30 (GGGTGGGAGTAGTTCCCTGCTAAGGGAGG). Of interest is that the structural conversion from a hairpin structure to diverse G4 structures in mt10251 is negligible in mt10251-d30 after the addition of 20 mM K+. Further kinetic and thermal studies of mt10251, mt10251-d30, and their mutants reveal the major factors in determining the transition from a hairpin structure to diverse G4 structures of mt10251 and the structural variation of their mutants after the addition of 20 mM K+.
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Affiliation(s)
- I-Te Chu
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 106 , Taiwan
| | - Ting-Yuan Tseng
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 106 , Taiwan
| | - Ta-Chau Chang
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 106 , Taiwan
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48
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49
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Oubaha H, Gohy J, Melinte S. Carbonyl‐Based π‐Conjugated Materials: From Synthesis to Applications in Lithium‐Ion Batteries. Chempluschem 2019; 84:1179-1214. [DOI: 10.1002/cplu.201800652] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Revised: 03/03/2019] [Indexed: 12/30/2022]
Affiliation(s)
- Hamid Oubaha
- Institute of Information and Communication TechnologiesElectronics and Applied MathematicsElectrical EngineeringUniversité catholique de Louvain Place du Levant 3 B-1348 Louvain-la-Neuve Belgium
| | - Jean‐François Gohy
- Institute of Condensed Matter and Nanosciences (IMCN)Bio- and Soft Matter (BSMA)Université catholique de Louvain Place L. Pasteur 1 B-1348 Louvain-la-Neuve Belgium
| | - Sorin Melinte
- Institute of Information and Communication TechnologiesElectronics and Applied MathematicsElectrical EngineeringUniversité catholique de Louvain Place du Levant 3 B-1348 Louvain-la-Neuve Belgium
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50
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Fernandez-Bartolome E, Santos J, Gamonal A, Khodabakhshi S, McCormick LJ, Teat SJ, Sañudo EC, Costa JS, Martín N. A Three-Dimensional Dynamic Supramolecular "Sticky Fingers" Organic Framework. Angew Chem Int Ed Engl 2019; 58:2310-2315. [PMID: 30549401 DOI: 10.1002/anie.201812419] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Revised: 11/26/2018] [Indexed: 11/07/2022]
Abstract
Engineering high-recognition host-guest materials is a burgeoning area in basic and applied research. The challenge of exploring novel porous materials with advanced functionalities prompted us to develop dynamic crystalline structures promoted by soft interactions. The first example of a pure molecular dynamic crystalline framework is demonstrated, which is held together by means of weak "sticky fingers" van der Waals interactions. The presented organic-fullerene-based material exhibits a non-porous dynamic crystalline structure capable of undergoing single-crystal-to-single-crystal reactions. Exposure to hydrazine vapors induces structural and chemical changes that manifest as toposelective hydrogenation of alternating rings on the surface of the [60]fullerene. Control experiments confirm that the same reaction does not occur when performed in solution. Easy-to-detect changes in the macroscopic properties of the sample suggest utility as molecular sensors or energy-storage materials.
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Affiliation(s)
| | - José Santos
- IMDEA Nanociencia, C/ Faraday 9, Ciudad Universitaria de Cantoblanco, 28049, Madrid, Spain
| | - Arturo Gamonal
- IMDEA Nanociencia, C/ Faraday 9, Ciudad Universitaria de Cantoblanco, 28049, Madrid, Spain
| | - Saeed Khodabakhshi
- IMDEA Nanociencia, C/ Faraday 9, Ciudad Universitaria de Cantoblanco, 28049, Madrid, Spain
| | - Laura J McCormick
- Advanced Light Source, Berkeley Laboratory, 1; Cyclotron Road, Berkeley, CA, 94720, USA
| | - Simon J Teat
- Advanced Light Source, Berkeley Laboratory, 1; Cyclotron Road, Berkeley, CA, 94720, USA
| | - E Carolina Sañudo
- Departament de Química Inorgànica i Orgànica, Secció química Inorgànica, Univ. de Barcelona, Av. Diagonal 645, 08028, Barcelona, Spain.,Institut de Nanociència i Nanotecnologia, Universitat de Barcelona, 08028, Barcelona, Spain
| | - José Sánchez Costa
- IMDEA Nanociencia, C/ Faraday 9, Ciudad Universitaria de Cantoblanco, 28049, Madrid, Spain
| | - Nazario Martín
- IMDEA Nanociencia, C/ Faraday 9, Ciudad Universitaria de Cantoblanco, 28049, Madrid, Spain.,Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Complutense, 28040, Madrid, Spain
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