1
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Kingsbury CJ, Senge MO. Molecular Symmetry and Art: Visualizing the Near-Symmetry of Molecules in Piet Mondrian's De Stijl. Angew Chem Int Ed Engl 2024; 63:e202403754. [PMID: 38619527 DOI: 10.1002/anie.202403754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/09/2024] [Accepted: 04/10/2024] [Indexed: 04/16/2024]
Abstract
Symmetry and shape are essential aspects of molecular structure and how we interpret molecules and their properties. We, as chemists, are comfortable with pictorial representations of structure, in which some nuance is lost-investigating molecular shape numerically by looking at how closely it fits a reference, such as a plane, or a set of vectors or coordinates, is informative, though far from engaging. Often relationships between chemical structure and derived values are obscured. Taking our inspiration from Piet Mondrian's Compositions, we have depicted the symmetry information encoded within 3D data as blocks of color, to show clearly how chemical arguments and resultant molecular distortion may contribute to symmetry. Great art gives us a new perspective on the world; as a pastiche, this art may allow us to look at familiar molecules, such as porphyrins, in a new light, understanding how their shape and properties are intertwined.
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Affiliation(s)
- Christopher J Kingsbury
- School of Chemistry, Chair of Organic Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Dublin, D02R590, Ireland
| | - Mathias O Senge
- School of Chemistry, Chair of Organic Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Dublin, D02R590, Ireland
- Institute for Advanced Study (TUM-IAS), Focus Group-Molecular and Interfacial Engineering of Organic Nanosystems, Technical University of Munich, Lichtenberg-Str. 2a, 85748, Garching, Germany
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2
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Biswas K, Chen Q, Obermann S, Ma J, Soler-Polo D, Melidonie J, Barragán A, Sánchez-Grande A, Lauwaet K, Gallego JM, Miranda R, Écija D, Jelínek P, Feng X, Urgel JI. On-Surface Synthesis of Non-Benzenoid Nanographenes Embedding Azulene and Stone-Wales Topologies. Angew Chem Int Ed Engl 2024; 63:e202318185. [PMID: 38299925 DOI: 10.1002/anie.202318185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 01/26/2024] [Accepted: 01/30/2024] [Indexed: 02/02/2024]
Abstract
The incorporation of non-benzenoid motifs in graphene nanostructures significantly impacts their properties, making them attractive for applications in carbon-based electronics. However, understanding how specific non-benzenoid structures influence their properties remains limited, and further investigations are needed to fully comprehend their implications. Here, we report an on-surface synthetic strategy toward fabricating non-benzenoid nanographenes containing different combinations of pentagonal and heptagonal rings. Their structure and electronic properties were investigated via scanning tunneling microscopy and spectroscopy, complemented by computational investigations. After thermal activation of the precursor P on the Au(111) surface, we detected two major nanographene products. Nanographene Aa-a embeds two azulene units formed through oxidative ring-closure of methyl substituents, while Aa-s contains one azulene unit and one Stone-Wales defect, formed by the combination of oxidative ring-closure and skeletal ring-rearrangement reactions. Aa-a exhibits an antiferromagnetic ground state with the highest magnetic exchange coupling reported up to date for a non-benzenoid containing nanographene, coexisting with side-products with closed shell configurations resulted from the combination of ring-closure and ring-rearragement reactions (Ba-a , Ba-s , Bs-a and Bs-s ). Our results provide insights into the single gold atom assisted synthesis of novel NGs containing non-benzenoid motifs and their tailored electronic/magnetic properties.
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Affiliation(s)
- Kalyan Biswas
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
| | - Qifan Chen
- Institute of Physics of the Czech Academy of Science, CZ-16253, Praha, Czech Republic
- Faculty of Mathematics and Physics, Charles University, V Holešovičkách 2, 180 00, Praha, Czech Republic
| | - Sebastian Obermann
- Center for Advancing Electronics Dresden (cfaed) & Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, D-01069, Dresden, Germany
| | - Ji Ma
- Center for Advancing Electronics Dresden (cfaed) & Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, D-01069, Dresden, Germany
- Max Planck Institute of Microstructure Physics, Weinberg 2, 06120, Halle, Germany
| | - Diego Soler-Polo
- Institute of Physics of the Czech Academy of Science, CZ-16253, Praha, Czech Republic
| | - Jason Melidonie
- Center for Advancing Electronics Dresden (cfaed) & Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, D-01069, Dresden, Germany
| | - Ana Barragán
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
| | - Ana Sánchez-Grande
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
| | - Koen Lauwaet
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
| | - José M Gallego
- Instituto de Ciencia de Materiales de Madrid (ICMM), CSIC, Cantoblanco, 28049, Madrid, Spain
| | - Rodolfo Miranda
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
- Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - David Écija
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
- Unidad de Nanomateriales avanzados, IMDEA Nanoscience, Unidad asociada al CSIC por el ICMM, 28049, Madrid, Spain
| | - Pavel Jelínek
- Institute of Physics of the Czech Academy of Science, CZ-16253, Praha, Czech Republic
- Regional Centre of Advanced Technologies and Materials, Palacký University Olomouc, 771 46, Olomouc, Czech Republic
| | - Xinliang Feng
- Center for Advancing Electronics Dresden (cfaed) & Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, D-01069, Dresden, Germany
- Max Planck Institute of Microstructure Physics, Weinberg 2, 06120, Halle, Germany
| | - José I Urgel
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049, Madrid, Spain
- Unidad de Nanomateriales avanzados, IMDEA Nanoscience, Unidad asociada al CSIC por el ICMM, 28049, Madrid, Spain
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3
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Arakawa K, Shimada T, Ishida T, Sato K, Takagi S. Structural Transformation of Azonia[5]helicene Photoproduct via Reaction Field Function of Layered Inorganic Material. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:4333-4339. [PMID: 38363642 DOI: 10.1021/acs.langmuir.3c03589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/18/2024]
Abstract
In an attempt to generalize "on surface synthesis", which has unique potential in the area of organic synthesis, the focus was placed on layered silicates having a highly flat surface. The photoreaction of (±)-13-bromo-6a-azonia[5]helicene (AHHBr) and (±)-2-bromo-13-methyl-6a-azonia[5]helicene (AHBrMe) in solution and within the layers was examined. In the case of AHBrMe, the photoproduct was different from that in solution. 1H nuclear magnetic resonance (NMR), Fourier transform-infrared spectroscopy (FT-IR), and electrospray ionization-mass spectrometry (ESI-MS) measurements revealed that the photoproduct obtained within the layers was a benzo-perylene molecule with a completely flat lactone structure (AL). This study is the first example of the successful conversion of a chemical reaction path due to the steric effect of the flat surface of layered silicate.
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Affiliation(s)
- Kyosuke Arakawa
- Department of Applied and Pure Chemistry, Tokyo University of Science, 2641 Yamasaki, Noda-city, Chiba 278-8510, Japan
| | - Tetsuya Shimada
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachioji-shi, Tokyo 192-0397, Japan
| | - Tamao Ishida
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachioji-shi, Tokyo 192-0397, Japan
- Research Center for Hydrogen Energy-Based Society (ReHES), Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
| | - Kiyoshi Sato
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachioji-shi, Tokyo 192-0397, Japan
| | - Shinsuke Takagi
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachioji-shi, Tokyo 192-0397, Japan
- Research Center for Hydrogen Energy-Based Society (ReHES), Tokyo Metropolitan University, 1-1 minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
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4
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Wang L, Peng X, Su J, Wang J, Gallardo A, Yang H, Chen Q, Lyu P, Jelínek P, Liu J, Wong MW, Lu J. Highly Selective On-Surface Ring-Opening of Aromatic Azulene Moiety. J Am Chem Soc 2024; 146:1563-1571. [PMID: 38141030 DOI: 10.1021/jacs.3c11652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2023]
Abstract
Controllable ring-opening of polycyclic aromatic hydrocarbons plays a crucial role in various chemical and biological processes. However, breaking down aromatic covalent C-C bonds is exceptionally challenging due to their high stability and strong aromaticity. This study presents a seminal report on the precise and highly selective on-surface ring-opening of the seven-membered ring within the aromatic azulene moieties under mild conditions. The chemical structures of the resulting products were identified using bond-resolved scanning probe microscopy. Furthermore, through density functional theory calculations, we uncovered the mechanism behind the ring-opening process and elucidated its chemical driving force. The key to achieving this ring-opening process lies in manipulating the local aromaticity of the aromatic azulene moiety through strain-induced internal ring rearrangement and cyclodehydrogenation. By precisely controlling these factors, we successfully triggered the desired ring-opening reaction. Our findings not only provide valuable insights into the ring-opening process of polycyclic aromatic hydrocarbons but also open up new possibilities for the manipulation and reconstruction of these important chemical structures.
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Affiliation(s)
- Lulu Wang
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Xinnan Peng
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Jie Su
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Junting Wang
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, People's Republic of China
| | - Aurelio Gallardo
- Institute of Physics of the Czech Academy of Science, 16200 Praha, Czech Republic
| | - Hui Yang
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Qifan Chen
- Institute of Physics of the Czech Academy of Science, 16200 Praha, Czech Republic
| | - Pin Lyu
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Pavel Jelínek
- Institute of Physics of the Czech Academy of Science, 16200 Praha, Czech Republic
- Regional Centre of Advanced Technologies and Materials, Palacký University, 78371 Olomouc, Czech Republic
| | - Junzhi Liu
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, People's Republic of China
| | - Ming Wah Wong
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Jiong Lu
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
- Institute for Functional Intelligent Materials, National University of Singapore, 4 Science Drive 2, 117544, Singapore
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5
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Tiwari SK, Pandey SK, Pandey R, Wang N, Bystrzejewski M, Mishra YK, Zhu Y. Stone-Wales Defect in Graphene. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2303340. [PMID: 37386778 DOI: 10.1002/smll.202303340] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Indexed: 07/01/2023]
Abstract
2D graphene the most investigated structures from nanocarbon family studied in the last three decades. It is projected as an excellent material useful for quantum computing, artificial intelligence, and next generation advanced technologies. Graphene exists in several forms and its extraordinary thermal, mechanical, and electronic properties, principally depend on the kind of perfection of the hexagonal atomic lattice. Defects are always considered as undesired components but certain defects in graphene could be an asset for electrochemistry and quantum electronics due to the engineered electronclouds and quantum tunnelling. The authors carefully discuss the Stone-Wales imperfections in graphene and its derivatives comprehensively. A specific emphasis is focused on the experimental and theoretical aspects of the Stone-Wales defects in graphene with respect to structure-property relationships. The corroboration of extrinsic defects like external atomic doping, functionalization, edge distortion in the graphene consisting of Stone-Wales imperfections, which are very significant in designing graphene-based electronic devices, are summarized.
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Affiliation(s)
- Santosh K Tiwari
- Key Laboratory of New Processing Technology for Nonferrous Metals and Materials, Ministry of Education, School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
- Department of Chemistry, NMAM Institute of Technology, Nitte (Deemed to be University), Mangaluru, Karnataka, 547110, India
| | - Sarvesh Kumar Pandey
- Department of Chemistry, School of Basic Sciences, Manipal University Jaipur, Jaipur, Rajasthan, 303007, India
| | - Raunak Pandey
- Department of Chemical Science and Engineering, Kathmandu University, Dhulikhel, 44600, Nepal
| | - Nannan Wang
- Key Laboratory of New Processing Technology for Nonferrous Metals and Materials, Ministry of Education, School of Resources, Environment and Materials, Guangxi University, Nanning, 530004, China
| | | | - Yogendra Kumar Mishra
- Smart Materials, NanoSYD, Mads Clausen Institute, University of Southern Denmark, Alsion 2, Sønderborg, 6400, Denmark
| | - Yanqiu Zhu
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, EX4 4QF, UK
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6
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Jiménez-Martín A, Villalobos F, Mallada B, Edalatmanesh S, Matěj A, Cuerva JM, Jelínek P, Campaña AG, de la Torre B. On-surface synthesis of non-benzenoid conjugated polymers by selective atomic rearrangement of ethynylarenes. Chem Sci 2023; 14:1403-1412. [PMID: 36794197 PMCID: PMC9906656 DOI: 10.1039/d2sc04722e] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 12/19/2022] [Indexed: 12/24/2022] Open
Abstract
Here, we report a new on-surface synthetic strategy to precisely introduce five-membered units into conjugated polymers from specifically designed precursor molecules that give rise to low-bandgap fulvalene-bridged bisanthene polymers. The selective formation of non-benzenoid units is finely controlled by the annealing parameters, which govern the initiation of atomic rearrangements that efficiently transform previously formed diethynyl bridges into fulvalene moieties. The atomically precise structures and electronic properties have been unmistakably characterized by STM, nc-AFM, and STS and the results are supported by DFT theoretical calculations. Interestingly, the fulvalene-bridged bisanthene polymers exhibit experimental narrow frontier electronic gaps of 1.2 eV on Au(111) with fully conjugated units. This on-surface synthetic strategy can potentially be extended to other conjugated polymers to tune their optoelectronic properties by integrating five-membered rings at precise sites.
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Affiliation(s)
- Alejandro Jiménez-Martín
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague Brehova 7 Prague 1 115 19 Czech Republic.,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
| | - Federico Villalobos
- Departamento de Química Orgánica, Universidad de Granada (UGR), Unidad de Excelencia de Química UEQ, C. U. Fuentenueva Granada 18071 Spain
| | - Benjamin Mallada
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,J. Department of Physical Chemistry, Faculty of Science, Palacký University Olomouc 78371 Czech Republic.,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
| | - Shayan Edalatmanesh
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,J. Department of Physical Chemistry, Faculty of Science, Palacký University Olomouc 78371 Czech Republic.,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
| | - Adam Matěj
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,J. Department of Physical Chemistry, Faculty of Science, Palacký University Olomouc 78371 Czech Republic.,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
| | - Juan M. Cuerva
- Departamento de Química Orgánica, Universidad de Granada (UGR), Unidad de Excelencia de Química UEQ, C. U. FuentenuevaGranada 18071Spain
| | - Pavel Jelínek
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
| | - Araceli G. Campaña
- Departamento de Química Orgánica, Universidad de Granada (UGR), Unidad de Excelencia de Química UEQ, C. U. FuentenuevaGranada 18071Spain
| | - Bruno de la Torre
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc Olomouc 783 71 Czech Republic .,Institute of Physics, Czech Academy of Sciences Prague 162 00 Czech Republic
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7
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Huang C, Xie L, Wang H, Liang Z, Jiang Z, Song F. Manipulation of C-C coupling pathways using different annealing procedures. Chem Commun (Camb) 2022; 58:13507-13510. [PMID: 36385194 DOI: 10.1039/d2cc04745d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
From scanning tunnelling microscopy and density functional theory calculations, we demonstrate that different annealing mechanisms could modulate distinct reaction pathways, where in a stepwise annealing procedure the detached Br atoms may reduce the activation barrier of CH activation resulting in hierarchical cross dehydrogenative coupling, while in a one-step annealing procedure only Ullmann coupling products are observed.
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Affiliation(s)
- Chaoqin Huang
- Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201000, China. .,University of Chinese Academy of Sciences, Beijing 101000, China
| | - Lei Xie
- Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China.
| | - Hongbing Wang
- Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201000, China. .,University of Chinese Academy of Sciences, Beijing 101000, China
| | - Zhaofeng Liang
- Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China.
| | - Zheng Jiang
- Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201000, China. .,University of Chinese Academy of Sciences, Beijing 101000, China.,Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China.
| | - Fei Song
- Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201000, China. .,University of Chinese Academy of Sciences, Beijing 101000, China.,Shanghai Synchrotron Radiation Facility, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China.
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8
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Mendieta‐Moreno JI, Mallada B, de la Torre B, Cadart T, Kotora M, Jelínek P. Unusual Scaffold Rearrangement in Polyaromatic Hydrocarbons Driven by Concerted Action of Single Gold Atoms on a Gold Surface. Angew Chem Int Ed Engl 2022; 61:e202208010. [DOI: 10.1002/anie.202208010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Indexed: 11/16/2022]
Affiliation(s)
| | - Benjamin Mallada
- Institute of Physics of Czech Academy of Sciences 16200 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Czech Advanced Technology and Research Institute (CATRIN) Palacký University Olomouc 78371 Olomouc Czech Republic
- Department of Physical Chemistry Palacký University Olomouc Str. 17. listopadu 12 771 46 Olomouc Czech Republic
| | - Bruno de la Torre
- Institute of Physics of Czech Academy of Sciences 16200 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Czech Advanced Technology and Research Institute (CATRIN) Palacký University Olomouc 78371 Olomouc Czech Republic
| | - Timothée Cadart
- Department of Organic Chemistry Charles University 128 00 Prague 2 Czech Republic
| | - Martin Kotora
- Department of Organic Chemistry Charles University 128 00 Prague 2 Czech Republic
| | - Pavel Jelínek
- Institute of Physics of Czech Academy of Sciences 16200 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Czech Advanced Technology and Research Institute (CATRIN) Palacký University Olomouc 78371 Olomouc Czech Republic
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9
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Yin R, Wang J, Qiu ZL, Meng J, Xu H, Wang Z, Liang Y, Zhao XJ, Ma C, Tan YZ, Li Q, Wang B. Step-Assisted On-Surface Synthesis of Graphene Nanoribbons Embedded with Periodic Divacancies. J Am Chem Soc 2022; 144:14798-14808. [PMID: 35926228 DOI: 10.1021/jacs.2c05570] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The bottom-up approach through on-surface synthesis of porous graphene nanoribbons (GNRs) presents a controllable manner for implanting periodic nanostructures to tune the electronic properties of GNRs in addition to bandgap engineering by width and edge configurations. However, owing to the existing steric hindrance in small pores like divacancies, it is still difficult to embed periodic divacancies with a nonplanar configuration into GNRs. Here, we demonstrate the on-surface synthesis of atomically precise eight-carbon-wide armchair GNRs embedded with periodic divacancies (DV8-aGNRs) by utilizing the monatomic step edges on the Au(111) surface. From a single molecular precursor correspondingly following a trans- and cis-coupling, the DV8-aGNR and another porous nanographene are respectively formed at step edges and on terraces at 720 and 570 K. Combining scanning tunneling microscopy/spectroscopy, atomic force microscopy, and first-principles calculations, we determine the out-of-plane conformation, wide bandgap (∼3.36 eV), and wiggly shaped frontier orbitals of the DV8-aGNR. Nudged elastic band calculations further quantitatively reveal that the additional steric hindrance effect in the cyclodehydrogenative reactions has a higher barrier of 1.3 eV than that in the planar porous nanographene, which also unveils the important role played by the monatomic Au step and adatoms in reducing the energy barriers and enhancing the thermodynamic preference of the oxidative cyclodehydrogenation. Our results provide the first case of GNRs containing periodic pores as small as divacancies with a nonplanar configuration and demonstrate the strategy by utilizing the chemical heterogeneity of a substrate to promote the formation of novel carbon nanomaterials.
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Affiliation(s)
- Ruoting Yin
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jianing Wang
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Zhen-Lin Qiu
- Collaborative Innovation Center of Chemistry for Energy Materials, State Key Laboratory for Physical Chemistry of Solid Surfaces, and Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, 361005 Xiamen, China
| | - Jie Meng
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Huimin Xu
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Zhengya Wang
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Yifan Liang
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Xin-Jing Zhao
- Collaborative Innovation Center of Chemistry for Energy Materials, State Key Laboratory for Physical Chemistry of Solid Surfaces, and Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, 361005 Xiamen, China
| | - Chuanxu Ma
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.,Hefei National Laboratory, University of Science and Technology of China, Hefei 230088, China
| | - Yuan-Zhi Tan
- Collaborative Innovation Center of Chemistry for Energy Materials, State Key Laboratory for Physical Chemistry of Solid Surfaces, and Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, 361005 Xiamen, China
| | - Qunxiang Li
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.,Hefei National Laboratory, University of Science and Technology of China, Hefei 230088, China
| | - Bing Wang
- Hefei National Research Center for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China.,Hefei National Laboratory, University of Science and Technology of China, Hefei 230088, China
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10
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On-Surface Synthesis of Polypyridine: Strain Enforces Extended Linear Chains. CHEMISTRY 2022. [DOI: 10.3390/chemistry4010009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Strain-induced on-surface transformations provide an appealing route to steer the selectivity towards desired products. Here, we demonstrate the selective on-surface synthesis of extended all-trans poly(2,6-pyridine) chains on Au(111). By combining high-resolution scanning tunneling and atomic force microscopy, we revealed the detailed chemical structure of the reaction products. Density functional theory calculations indicate that the synthesis of extended covalent structures is energetically favored over the formation of macrocycles, due to the minimization of internal strain. Our results consolidate the exploitation of internal strain relief as a driving force to promote selective on-surface reactions.
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11
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Arakawa K, Shimada T, Ishida T, Takagi S. "In-water" Dehydration Reaction of an Aromatic Diol on an Inorganic Surface. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:11978-11985. [PMID: 34482684 DOI: 10.1021/acs.langmuir.1c01499] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The effect of a synthetic saponite surface on the "in-water" dehydration reaction of diol was examined using 4-formyl-1-methylquinolinium salt (MQu+) as a substrate. The equilibrium between aldehyde (MQu+-Aldehyde) and diol (MQu+-Diol) was affected by the surrounding environment. The equilibrium behavior was observed by 1H nuclear magnetic resonance (NMR) and UV-vis absorption measurements. Although MQu+ was completely in the form of MQu+-Diol in water, the equilibrium almost shifted to the MQu+-Aldehyde side when MQu+ was adsorbed on the saponite surface in water. In addition, the MQu+-Aldehyde ratio depended on the negative charge density of saponite. The factors that determine MQu+-Aldehyde: MQu+-Diol ratio were discussed from the thermodynamic analysis of the system. These data indicate that the electrostatic interaction between the charged saponite surface and MQu+ stabilized the aldehyde side enthalpically and destabilized it entropically. The major reason for these results is considered to be the difference in adsorption stabilization between MQu+-Aldehyde and MQu+-Diol on saponite surfaces.
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Affiliation(s)
- Kyosuke Arakawa
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
| | - Tetsuya Shimada
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
- Research Center for Hydrogen Energy-based Society (ReHES), Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
| | - Tamao Ishida
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
- Research Center for Hydrogen Energy-based Society (ReHES), Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
| | - Shinsuke Takagi
- Department of Applied Chemistry for Environment, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
- Research Center for Hydrogen Energy-based Society (ReHES), Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachiohji-shi, Tokyo 192-0397, Japan
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12
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Bischoff F, Riss A, Michelitsch GS, Ducke J, Barth JV, Reuter K, Auwärter W. Surface-Mediated Ring-Opening and Porphyrin Deconstruction via Conformational Distortion. J Am Chem Soc 2021; 143:15131-15138. [PMID: 34472340 DOI: 10.1021/jacs.1c05348] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The breakdown of macrocyclic compounds is of utmost importance in manifold biological and chemical processes, usually proceeding via oxygenation-induced ring-opening reactions. Here, we introduce a surface chemical route to selectively break a prototypical porphyrin species, cleaving off one pyrrole unit and affording a tripyrrin derivative. This pathway, operational in an ultrahigh vacuum environment at moderate temperature is enabled by a distinct molecular conformation achieved via the specific interaction between the porphyrin and its copper support. We provide an atomic-level characterization of the surface-anchored tripyrrin, its reaction intermediates, and byproducts by bond-resolved atomic force microscopy, unequivocally identifying the molecular skeletons. The ring-opening is rationalized by the distortion reducing the macrocycle's stability. Our findings open a route to steer ring-opening reactions by conformational design and to study intriguing tetrapyrrole catabolite analogues on surfaces.
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Affiliation(s)
- Felix Bischoff
- Physics Department E20, Technical University of Munich, James-Franck Str. 1, 85748 Garching, Germany
| | - Alexander Riss
- Physics Department E20, Technical University of Munich, James-Franck Str. 1, 85748 Garching, Germany
| | - Georg S Michelitsch
- Theoretical Chemistry and Catalysis Research Center, Technical University of Munich, Lichtenbergstr. 5, 85748 Garching, Germany
| | - Jacob Ducke
- Physics Department E20, Technical University of Munich, James-Franck Str. 1, 85748 Garching, Germany
| | - Johannes V Barth
- Physics Department E20, Technical University of Munich, James-Franck Str. 1, 85748 Garching, Germany
| | - Karsten Reuter
- Theoretical Chemistry and Catalysis Research Center, Technical University of Munich, Lichtenbergstr. 5, 85748 Garching, Germany.,Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin-Dahlem, Germany
| | - Willi Auwärter
- Physics Department E20, Technical University of Munich, James-Franck Str. 1, 85748 Garching, Germany
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13
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Mallada B, de la Torre B, Mendieta-Moreno JI, Nachtigallová D, Matěj A, Matoušek M, Mutombo P, Brabec J, Veis L, Cadart T, Kotora M, Jelínek P. On-Surface Strain-Driven Synthesis of Nonalternant Non-Benzenoid Aromatic Compounds Containing Four- to Eight-Membered Rings. J Am Chem Soc 2021; 143:14694-14702. [PMID: 34379396 DOI: 10.1021/jacs.1c06168] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The synthesis of polycyclic aromatic hydrocarbons containing various non-benzenoid rings remains a big challenge facing contemporary organic chemistry despite a considerable effort made over the last decades. Herein, we present a novel route, employing on-surface chemistry, to synthesize nonalternant polycyclic aromatic hydrocarbons containing up to four distinct kinds of non-benzenoid rings. We show that the surface-induced mechanical constraints imposed on strained helical reactants play a decisive role leading to the formation of products, energetically unfavorable in solution, with a peculiar ring current stabilizing the aromatic character of the π-conjugated system. Determination of the chemical and electronic structures of the most frequent product reveals its closed-shell character and low band gap. The present study renders a new route for the synthesis of novel nonalternant polycyclic aromatic hydrocarbons or other hydrocarbons driven by internal stress imposed by the surface not available by traditional approaches of organic chemistry in solution.
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Affiliation(s)
- Benjamin Mallada
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, 783 71 Olomouc, Czech Republic.,Institute of Physics, Czech Academy of Sciences, 162 00 Prague, Czech Republic
| | - Bruno de la Torre
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, 783 71 Olomouc, Czech Republic.,Institute of Physics, Czech Academy of Sciences, 162 00 Prague, Czech Republic
| | | | - Dana Nachtigallová
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, 783 71 Olomouc, Czech Republic.,Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, 162 00 Prague, Czech Republic
| | - Adam Matěj
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, 783 71 Olomouc, Czech Republic.,Institute of Physics, Czech Academy of Sciences, 162 00 Prague, Czech Republic
| | - Mikulas Matoušek
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, 182 23 Prague, Czech Republic
| | - Pingo Mutombo
- Institute of Physics, Czech Academy of Sciences, 162 00 Prague, Czech Republic
| | - Jiri Brabec
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, 182 23 Prague, Czech Republic
| | - Libor Veis
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, 182 23 Prague, Czech Republic
| | - Timothée Cadart
- Department of Organic Chemistry, Charles University, 128 00 Prague, Czech Republic
| | - Martin Kotora
- Department of Organic Chemistry, Charles University, 128 00 Prague, Czech Republic
| | - Pavel Jelínek
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, 783 71 Olomouc, Czech Republic.,Institute of Physics, Czech Academy of Sciences, 162 00 Prague, Czech Republic
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14
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Oxidative cyclo-rearrangement of helicenes into chiral nanographenes. Nat Commun 2021; 12:2786. [PMID: 33986283 PMCID: PMC8119938 DOI: 10.1038/s41467-021-22992-6] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 03/30/2021] [Indexed: 01/16/2023] Open
Abstract
Nanographenes are emerging as a distinctive class of functional materials for electronic and optical devices. It is of remarkable significance to enrich the precise synthetic chemistry for these molecules. Herein, we develop a facile strategy to recompose helicenes into chiral nanographenes through a unique oxidative cyclo-rearrangement reaction. Helicenes with 7~9 ortho-fused aromatic rings are firstly oxidized and cyclized, and subsequently rearranged into nanographenes with an unsymmetrical helicoid shape through sequential 1,2-migrations. Such skeletal reconstruction is virtually driven by the gradual release of the strain of the highly distorted helicene skeleton. Importantly, the chirality of the helicene precursor can be integrally inherited by the resulting nanographene. Thus, a series of chiral nanographenes are prepared from a variety of carbohelicenes and heterohelicenes. Moreover, such cyclo-rearrangement reaction can be sequentially or simultaneously associated with conventional oxidative cyclization reactions to ulteriorly enrich the geometry diversity of nanographenes, aiming at innovative properties. Nanographenes are emerging as a distinctive class of functional materials for electronic and optical devices. Here, the authors develop a facile strategy to recompose helicenes into a variety of chiral nanographenes through an oxidative cyclo-rearrangement reaction.
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15
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Han Y, Wang J, Song L, Zheng Y, Li Y, Lin H, Li Q, Chi L. A Fundamental Role of the Molecular Length in Forming Metal-Organic Hybrids of Phenol Derivatives on Silver Surfaces. J Phys Chem Lett 2021; 12:1869-1875. [PMID: 33586446 DOI: 10.1021/acs.jpclett.1c00005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
In on-surface chemistry, the efficient preparation of metal-organic hybrids is regarded as a primary path to mediate controlled synthesis of well-ordered low-dimensional organic nanostructures. The fundamental mechanisms in forming these hybrid structures, however, are so far insufficiently explored. Here, with scanning tunneling microscopy, we studied the bonding behavior of the adsorbed phenol derivatives with different molecular lengths. We reveal that shorter molecules favor bonding with extracted metal adatoms and result in metal-organic hybrids, whereas longer molecules prefer to bond with lattice metal atoms. The conclusions are further confirmed by density functional theory calculations.
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Affiliation(s)
- Yangyang Han
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
| | - Junbo Wang
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
| | - Luying Song
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
| | - Yuanjing Zheng
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
| | - Youyong Li
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
| | - Haiping Lin
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710119, China
| | - Qing Li
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710119, China
| | - Lifeng Chi
- Institute of Functional Nano & Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices, Soochow University, 199 Ren'ai Road, Suzhou 215123, P. R. China
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16
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Fei Y, Fu Y, Bai X, Du L, Li Z, Komber H, Low KH, Zhou S, Phillips DL, Feng X, Liu J. Defective Nanographenes Containing Seven-Five-Seven (7-5-7)-Membered Rings. J Am Chem Soc 2021; 143:2353-2360. [PMID: 33502182 DOI: 10.1021/jacs.0c12116] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Defects have been observed in graphene and are expected to play a key role in its optical, electronic, and magnetic properties. However, because most of the studies focused on the structural characterization, the implications of topological defects on the physicochemical properties of graphene remain poorly understood. Here, we demonstrate a bottom-up synthesis of three novel nanographenes (1-3) with well-defined defects in which seven-five-seven (7-5-7)-membered rings were introduced to their sp2 carbon frameworks. From the X-ray crystallographic analysis, compound 1 adopts a nearly planar structure. Compound 2, with an additional five-membered ring compared to 1, possesses a slightly saddle-shaped geometry. Compound 3, which can be regarded as the "head-to-head" fusion of 1 with two bonds, features two saddles connected together. The resultant defective nanographenes 1-3 were well-investigated by UV-vis absorption, cyclic voltammetry, and time-resolved absorption spectra and further corroborated by density functional theory (DFT) calculations. Detailed experimental and theoretical investigations elucidate that these three nanographenes 1-3 exhibit an anti-aromatic character in their ground states and display a high stability under ambient conditions, which contrast with the reported unstable biradicaloid nanographenes that contain heptagons. Our work reported herein offers insights into the understanding of structure-related properties and enables the control of the electronic structures of expanded nanographenes with atomically precise defects.
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Affiliation(s)
- Yiyang Fei
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
| | - Yubin Fu
- Centre for Advancing Electronics Dresden (CFAED), Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062 Dresden, Germany
| | - Xueqin Bai
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
| | - Lili Du
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
| | - Zichao Li
- Helmholtz-Zentrum Dresden-Rossendorf, Institute of Ion Beam Physics and Materials Research, Bautzner Landstraße 400, 01328 Dresden, Germany
| | - Hartmut Komber
- Leibniz-Institut für Polymerforschung Dresden e. V., Hohe Straße 6, 01069 Dresden, Germany
| | - Kam-Hung Low
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
| | - Shengqiang Zhou
- Helmholtz-Zentrum Dresden-Rossendorf, Institute of Ion Beam Physics and Materials Research, Bautzner Landstraße 400, 01328 Dresden, Germany
| | - David Lee Phillips
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
| | - Xinliang Feng
- Centre for Advancing Electronics Dresden (CFAED), Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062 Dresden, Germany
| | - Junzhi Liu
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, 999077 Hong Kong, P. R. China
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17
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Song S, Su J, Telychko M, Li J, Li G, Li Y, Su C, Wu J, Lu J. On-surface synthesis of graphene nanostructures with π-magnetism. Chem Soc Rev 2021; 50:3238-3262. [PMID: 33481981 DOI: 10.1039/d0cs01060j] [Citation(s) in RCA: 58] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Graphene nanostructures (GNs) including graphene nanoribbons and nanoflakes have attracted tremendous interest in the field of chemistry and materials science due to their fascinating electronic, optical and magnetic properties. Among them, zigzag-edged GNs (ZGNs) with precisely-tunable π-magnetism hold great potential for applications in spintronics and quantum devices. To improve the stability and processability of ZGNs, substitutional groups are often introduced to protect the reactive edges in organic synthesis, which renders the study of their intrinsic properties difficult. In contrast to the conventional wet-chemistry method, on-surface bottom-up synthesis presents a promising approach for the fabrication of both unsubstituted ZGNs and functionalized ZGNs with atomic precision via surface-catalyzed transformation of rationally-designed precursors. The structural and spin-polarized electronic properties of these ZGNs can then be characterized with sub-molecular resolution by means of scanning probe microscopy techniques. This review aims to highlight recent advances in the on-surface synthesis and characterization of a diversity of ZGNs with π-magnetism. We also discuss the important role of precursor design and reaction stimuli in the on-surface synthesis of ZGNs and their π-magnetism origin. Finally, we will highlight the existing challenges and future perspective surrounding the synthesis of novel open-shell ZGNs towards next-generation quantum technology.
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Affiliation(s)
- Shaotang Song
- SZU-NUS Collaborative Center, International Collaborative Laboratory of 2D Materials for Optoelectronic Science & Technology of Ministry of Education, Engineering Technology Research Center for 2D Materials Information Functional Devices and Systems of Guangdong Province, Institute of Microscale Optoelectronics, Shenzhen University, Shen Zhen, 518060, China.
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18
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Konishi A, Yasuda M. Breathing New Life into Nonalternant Hydrocarbon Chemistry: Syntheses and Properties of Polycyclic Hydrocarbons Containing Azulene, Pentalene, and Heptalene Frameworks. CHEM LETT 2021. [DOI: 10.1246/cl.200650] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Akihito Konishi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
- Center for Atomic and Molecular Technologies, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Makoto Yasuda
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
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19
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Shiotari A, Hamada I, Nakae T, Mori S, Okujima T, Uno H, Sakaguchi H, Hamamoto Y, Morikawa Y, Sugimoto Y. Manipulable Metal Catalyst for Nanographene Synthesis. NANO LETTERS 2020; 20:8339-8345. [PMID: 33090808 DOI: 10.1021/acs.nanolett.0c03510] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Performing bottom-up synthesis by using molecules adsorbed on a surface is an effective method to yield functional polycyclic aromatic hydrocarbons (PAHs) and nanocarbon materials. The intramolecular cyclodehydrogenation of hydrocarbons is a critical process in this synthesis; however, thus far, its elementary steps have not been elucidated thoroughly. In this study, we utilize the metal tip of a low-temperature noncontact atomic force microscope as a manipulable metal surface to locally activate dehydrogenation for PAH-forming cyclodehydrogenation. This method leads to the dissociation of a H atom of an intermediate to yield the cyclodehydrogenated product in a target-selective and reproducible manner. We demonstrate the metal-tip-catalyzed dehydrogenation for both benzenoid and nonbenzonoid PAHs, suggesting its universal applicability as a catalyst for nanographene synthesis.
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Affiliation(s)
- Akitoshi Shiotari
- Department of Advanced Materials Science, The University of Tokyo, 5-1-5 Kashiwanoha, 277-8561 Kashiwa, Japan
| | - Ikutaro Hamada
- Department of Precision Engineering, Graduate School of Engineering, Osaka University, 565-0871 Suita, Japan
| | - Takahiro Nakae
- Institute of Advanced Energy, Kyoto University, 611-0011 Uji, Japan
| | - Shigeki Mori
- Advanced Research Support Center, Ehime University, 790-8577 Matsuyama, Japan
| | - Tetsuo Okujima
- Graduate School of Science and Engineering, Ehime University, 790-8577 Matsuyama, Japan
| | - Hidemitsu Uno
- Graduate School of Science and Engineering, Ehime University, 790-8577 Matsuyama, Japan
| | | | - Yuji Hamamoto
- Department of Precision Engineering, Graduate School of Engineering, Osaka University, 565-0871 Suita, Japan
| | - Yoshitada Morikawa
- Department of Precision Engineering, Graduate School of Engineering, Osaka University, 565-0871 Suita, Japan
- Research Center for Ultra-Precision Science and Technology, Graduate School of Engineering, Osaka University, 565-0871 Suita, Japan
| | - Yoshiaki Sugimoto
- Department of Advanced Materials Science, The University of Tokyo, 5-1-5 Kashiwanoha, 277-8561 Kashiwa, Japan
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20
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Lohr TG, Urgel JI, Eimre K, Liu J, Di Giovannantonio M, Mishra S, Berger R, Ruffieux P, Pignedoli CA, Fasel R, Feng X. On-Surface Synthesis of Non-Benzenoid Nanographenes by Oxidative Ring-Closure and Ring-Rearrangement Reactions. J Am Chem Soc 2020; 142:13565-13572. [DOI: 10.1021/jacs.0c05668] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Thorsten G. Lohr
- Center for Advancing Electronics and Faculty of Chemistry and Food Chemistry, Technical University of Dresden, 01062 Dresden, Germany
| | - José I. Urgel
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
- IMDEA Nanoscience, C/Faraday 9, Campus de Cantoblanco, 28049 Madrid, Spain
| | - Kristjan Eimre
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Junzhi Liu
- Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s Republic of China
| | - Marco Di Giovannantonio
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Shantanu Mishra
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Reinhard Berger
- Center for Advancing Electronics and Faculty of Chemistry and Food Chemistry, Technical University of Dresden, 01062 Dresden, Germany
| | - Pascal Ruffieux
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Carlo A. Pignedoli
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Roman Fasel
- Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
- Department of Chemistry and Biochemistry, University of Bern, Freiestrasse 3, 3012 Bern, Switzerland
| | - Xinliang Feng
- Center for Advancing Electronics and Faculty of Chemistry and Food Chemistry, Technical University of Dresden, 01062 Dresden, Germany
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21
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Abstract
In the past decade, on-surface chemistry has provided fascinating concepts for the construction of covalently bonded molecular nanostructures and the exploration of new synthetic pathways that may be different from chemical synthesis in solution. Although the intermolecular reaction of precursor molecules may lead to the formation of the desired low-dimensional molecular architectures, it remains challenging to realize defect-free syntheses over large areas. Recently, intramolecular on-surface reactions have attracted increasing attention because they offer promising ways to synthesize functional organic molecules, especially those with extended conjugated π-systems. In this Perspective, we summarize the recent achievements in the field of on-surface intramolecular reactions and discuss future prospects.
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Affiliation(s)
- Biao Yang
- Institute of Functional Nano and Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, P.R. China
| | - Bin Dong
- Institute of Functional Nano and Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, P.R. China
| | - Lifeng Chi
- Institute of Functional Nano and Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou 215123, P.R. China
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22
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Krug CK, Nieckarz D, Fan Q, Szabelski P, Gottfried JM. The Macrocycle versus Chain Competition in On-Surface Polymerization: Insights from Reactions of 1,3-Dibromoazulene on Cu(111). Chemistry 2020; 26:7647-7656. [PMID: 32031714 PMCID: PMC7318695 DOI: 10.1002/chem.202000486] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2020] [Indexed: 12/21/2022]
Abstract
Ring/chain competition in oligomerization reactions represents a long‐standing topic of synthetic chemistry and was treated extensively for solution reactions but is not well‐understood for the two‐dimensional confinement of surface reactions. Here, the kinetic and thermodynamic principles of ring/chain competition in on‐surface synthesis are addressed by scanning tunneling microscopy, X‐ray photoelectron spectroscopy, and Monte Carlo simulations applied to azulene‐based organometallic oligomers on Cu(111). Analysis of experiments and simulations reveals how the ring/chain ratio can be controlled through variation of coverage and temperature. At room temperature, non‐equilibrium conditions prevail and kinetic control leads to preferential formation of the entropically favored chains. In contrast, high‐temperature equilibrium conditions are associated with thermodynamic control, resulting in increased yields of the energetically favored rings. The optimum conditions for ring formation include the lowest possible temperature within the regime of thermodynamic control and a low coverage. The general implications are discussed and compared to the solution case.
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Affiliation(s)
- Claudio K Krug
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, 35032, Marburg, Germany
| | - Damian Nieckarz
- Department of Theoretical Chemistry, Institute of Chemical Sciences, Faculty of Chemistry, Maria Curie-Skłodowska University in Lublin, Pl. M.C. Skłodowskiej 3, Lublin, 20-031, Poland
| | - Qitang Fan
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, 35032, Marburg, Germany
| | - Paweł Szabelski
- Department of Theoretical Chemistry, Institute of Chemical Sciences, Faculty of Chemistry, Maria Curie-Skłodowska University in Lublin, Pl. M.C. Skłodowskiej 3, Lublin, 20-031, Poland
| | - J Michael Gottfried
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, 35032, Marburg, Germany
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23
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Hou ICY, Sun Q, Eimre K, Di Giovannantonio M, Urgel JI, Ruffieux P, Narita A, Fasel R, Müllen K. On-Surface Synthesis of Unsaturated Carbon Nanostructures with Regularly Fused Pentagon-Heptagon Pairs. J Am Chem Soc 2020; 142:10291-10296. [PMID: 32428409 PMCID: PMC7304065 DOI: 10.1021/jacs.0c03635] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
![]()
Multiple
fused pentagon–heptagon pairs are frequently found
as defects at the grain boundaries of the hexagonal graphene lattice
and are suggested to have a fundamental influence on graphene-related
materials. However, the construction of sp2-carbon skeletons
with multiple regularly fused pentagon–heptagon pairs is challenging.
In this work, we found that the pentagon–heptagon skeleton
of azulene was rearranged during the thermal reaction of an azulene-incorporated
organometallic polymer on Au(111). The resulting sp2-carbon
frameworks were characterized by high-resolution scanning probe microscopy
techniques and feature novel polycyclic architectures composed of
multiple regularly fused pentagon–heptagon pairs. Moreover,
the calculated analysis of its aromaticity revealed a peculiar polar
electronic structure.
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Affiliation(s)
- Ian Cheng-Yi Hou
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.,Department Chemie, Johannes Gutenberg-University Mainz, Duesbergweg 10-14, 55128 Mainz, Germany
| | - Qiang Sun
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Kristjan Eimre
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Marco Di Giovannantonio
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - José I Urgel
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Pascal Ruffieux
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Akimitsu Narita
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.,Organic and Carbon Nanomaterials Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Kunigami, Okinawa 904-0495, Japan
| | - Roman Fasel
- Empa, Swiss Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland.,Department of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland
| | - Klaus Müllen
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.,Department Chemie, Johannes Gutenberg-University Mainz, Duesbergweg 10-14, 55128 Mainz, Germany
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24
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Su J, Wu X, Song S, Telychko M, Lu J. Substrate induced strain for on-surface transformation and synthesis. NANOSCALE 2020; 12:7500-7508. [PMID: 32227066 DOI: 10.1039/d0nr01270j] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Intermolecular strain has long been used to steer and promote chemical reactions towards desired products in wet chemical synthesis. However, similar protocols have not been adopted for the on-surface synthesis on solid substrates due to the complexity of reaction processes. Recent advances in the sub-molecular resolution with scanning probe microscopy allow us to capture on-surface reaction pathways and to gain substantial insights into the role of strain in chemical reactions. The primary focus of this review is to highlight the recent findings on strain-induced on-surface reactions. Such substrate-induced processes can be applied to alter the chemical reactivity and to drive on-surface chemical reactions in different manners, which provides a promising alternative approach for on-surface synthesis. This review aims to shed light on the utilization of substrate-induced strain for on-surface transformation and synthesis of atomically-precise novel functional nanomaterials.
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Affiliation(s)
- Jie Su
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore.
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25
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Ishii A, Shiotari A, Sugimoto Y. Quality control of on-surface-synthesised seven-atom wide armchair graphene nanoribbons. NANOSCALE 2020; 12:6651-6657. [PMID: 32175533 DOI: 10.1039/c9nr10942k] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
On-surface synthesis is a powerful method for fabricating atomically precise graphene nanoribbons (GNRs), but the products always include defective structures. In this study, scanning tunnelling microscopy and atomic force microscopy were used to determine the length distribution of armchair-edge GNRs with a width of seven carbon atoms (7-AGNRs) synthesised on Au(111) and to characterise defective structures. The product quality was improved by increasing the precursor deposition amount because of a preference for intermolecular polymerisation over intramolecular cyclodehydrogenation at a high coverage. However, the annealing rate had a complex effect on the quality, with a low rate elongating 7-AGNRs but degenerating the length uniformity. These insights advance the understanding of the critical parameters for obtaining high-quality products in high yield by on-surface synthesis.
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Affiliation(s)
- Ayumu Ishii
- Department of Advanced Materials Science, The University of Tokyo, 5-1-5 Kashiwanoha, 277-8561 Kashiwa, Japan.
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26
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Telychko M, Su J, Gallardo A, Gu Y, Mendieta‐Moreno JI, Qi D, Tadich A, Song S, Lyu P, Qiu Z, Fang H, Koh MJ, Wu J, Jelínek P, Lu J. Strain‐Induced Isomerization in One‐Dimensional Metal–Organic Chains. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201909074] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Mykola Telychko
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
| | - Jie Su
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
| | - Aurelio Gallardo
- Faculty of Mathematics and Physics Charles University V Holešovičkách 2 180 00 Prague Czech Republic
- Institute of Physics The Czech Academy of Sciences 162 00 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Palacký University 78371 Olomouc Czech Republic
| | - Yanwei Gu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | | | - Dongchen Qi
- School of Chemistry, Physics and Mechanical Engineering Queensland University of Technology Brisbane Queensland 4001 Australia
| | - Anton Tadich
- Australian Synchrotron 800 Blackburn Road Clayton Victoria 3168 Australia
| | - Shaotang Song
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Pin Lyu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Zhizhan Qiu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- NUS Graduate School for Integrative Sciences and Engineering National University of Singapore 28 Medical Drive Singapore 117456 Singapore
| | - Hanyan Fang
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Ming Joo Koh
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Jishan Wu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Pavel Jelínek
- Institute of Physics The Czech Academy of Sciences 162 00 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Palacký University 78371 Olomouc Czech Republic
| | - Jiong Lu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
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27
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Telychko M, Su J, Gallardo A, Gu Y, Mendieta‐Moreno JI, Qi D, Tadich A, Song S, Lyu P, Qiu Z, Fang H, Koh MJ, Wu J, Jelínek P, Lu J. Strain‐Induced Isomerization in One‐Dimensional Metal–Organic Chains. Angew Chem Int Ed Engl 2019; 58:18591-18597. [DOI: 10.1002/anie.201909074] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2019] [Revised: 09/21/2019] [Indexed: 11/08/2022]
Affiliation(s)
- Mykola Telychko
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
| | - Jie Su
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
| | - Aurelio Gallardo
- Faculty of Mathematics and Physics Charles University V Holešovičkách 2 180 00 Prague Czech Republic
- Institute of Physics The Czech Academy of Sciences 162 00 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Palacký University 78371 Olomouc Czech Republic
| | - Yanwei Gu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | | | - Dongchen Qi
- School of Chemistry, Physics and Mechanical Engineering Queensland University of Technology Brisbane Queensland 4001 Australia
| | - Anton Tadich
- Australian Synchrotron 800 Blackburn Road Clayton Victoria 3168 Australia
| | - Shaotang Song
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Pin Lyu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Zhizhan Qiu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- NUS Graduate School for Integrative Sciences and Engineering National University of Singapore 28 Medical Drive Singapore 117456 Singapore
| | - Hanyan Fang
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Ming Joo Koh
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Jishan Wu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
| | - Pavel Jelínek
- Institute of Physics The Czech Academy of Sciences 162 00 Prague Czech Republic
- Regional Centre of Advanced Technologies and Materials Palacký University 78371 Olomouc Czech Republic
| | - Jiong Lu
- Department of Chemistry National University of Singapore 3 Science Drive 3 Singapore 117543 Singapore
- Centre for Advanced 2D Materials (CA2DM) National University of Singapore 6 Science Drive 2 Singapore 117546 Singapore
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28
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Fan Q, Martin-Jimenez D, Ebeling D, Krug CK, Brechmann L, Kohlmeyer C, Hilt G, Hieringer W, Schirmeisen A, Gottfried JM. Nanoribbons with Nonalternant Topology from Fusion of Polyazulene: Carbon Allotropes beyond Graphene. J Am Chem Soc 2019; 141:17713-17720. [DOI: 10.1021/jacs.9b08060] [Citation(s) in RCA: 98] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Qitang Fan
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, Marburg 35032, Germany
| | | | | | - Claudio K. Krug
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, Marburg 35032, Germany
| | - Lea Brechmann
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, Marburg 35032, Germany
| | - Corinna Kohlmeyer
- Institute of Chemistry, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg 26111, Germany
| | - Gerhard Hilt
- Institute of Chemistry, Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg 26111, Germany
| | - Wolfgang Hieringer
- Theoretical Chemistry and Interdisciplinary Center for Molecular Materials (ICMM), Department of Chemistry and Pharmacy, Friedrich-Alexander-Universität Erlangen-Nürnberg, Egerlandstraße 3, Erlangen 91058, Germany
| | | | - J. Michael Gottfried
- Department of Chemistry, Philipps University Marburg, Hans-Meerwein-Straße 4, Marburg 35032, Germany
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29
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Proving hydrogen addition mechanism from manure to coal surface obtained by GC-MS and 1H-NMR analysis. Sci Rep 2019; 9:9205. [PMID: 31235778 PMCID: PMC6591345 DOI: 10.1038/s41598-019-45254-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 04/23/2019] [Indexed: 11/08/2022] Open
Abstract
In this study, to explain the possibility of hydrogen transfer paths from manure to coal, Elbistan lignite (EL) combined with manure liquefaction of oil + gas products were analysed with Gas Chromatography-Mass Spectroscopy (GC-MS) and Nuclear Magnetic Resonance Spectroscopy (1H-NMR) technique. In the same way, it is observed that oils which as they fragment to an alkane-alkene mixture, serve as a hydrogen “sponge” and put a serious hydrogen need on the parts of the free radicals and molecules that are currently hydrogen poor. Concerning Elbistan lignite and manure do not have any aromatic hydrogen. Moreover, when the aromatic compounds were hydrogenated, their aromatic hydrogen was transformed to naphthenic hydrogen. Hydrogen transfer was due to isomerization of heptane from 3-methylhexane obtained in test oil where only manure was present as hydrogen donor in the liquefaction environment despite hydrogenation of isomerization from naphthalene to azulene.
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30
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Clair S, de Oteyza DG. Controlling a Chemical Coupling Reaction on a Surface: Tools and Strategies for On-Surface Synthesis. Chem Rev 2019; 119:4717-4776. [PMID: 30875199 PMCID: PMC6477809 DOI: 10.1021/acs.chemrev.8b00601] [Citation(s) in RCA: 325] [Impact Index Per Article: 65.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2018] [Indexed: 01/06/2023]
Abstract
On-surface synthesis is appearing as an extremely promising research field aimed at creating new organic materials. A large number of chemical reactions have been successfully demonstrated to take place directly on surfaces through unusual reaction mechanisms. In some cases the reaction conditions can be properly tuned to steer the formation of the reaction products. It is thus possible to control the initiation step of the reaction and its degree of advancement (the kinetics, the reaction yield); the nature of the reaction products (selectivity control, particularly in the case of competing processes); as well as the structure, position, and orientation of the covalent compounds, or the quality of the as-formed networks in terms of order and extension. The aim of our review is thus to provide an extensive description of all tools and strategies reported to date and to put them into perspective. We specifically define the different approaches available and group them into a few general categories. In the last part, we demonstrate the effective maturation of the on-surface synthesis field by reporting systems that are getting closer to application-relevant levels thanks to the use of advanced control strategies.
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Affiliation(s)
- Sylvain Clair
- Aix
Marseille Univ., Université de Toulon, CNRS, IM2NP, Marseille, France
| | - Dimas G. de Oteyza
- Donostia
International Physics Center, San
Sebastián 20018, Spain
- Centro
de Física de Materiales CSIC-UPV/EHU-MPC, San Sebastián 20018, Spain
- Ikerbasque,
Basque Foundation for Science, Bilbao 48013, Spain
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31
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Kunchala D, Sa S, Nayak P, Ponniah S J, Venkatasubbaiah K. Tetrahydrodibenzophenanthridine-Based Boron-Bridged Polycyclic Aromatic Hydrocarbons: Synthesis, Structural Diversity, and Optical Properties. Organometallics 2019. [DOI: 10.1021/acs.organomet.8b00853] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Dhanunjayarao Kunchala
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, Bhubaneswar 752050, Odisha, India
| | - Shreenibasa Sa
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, Bhubaneswar 752050, Odisha, India
| | - Prakash Nayak
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, Bhubaneswar 752050, Odisha, India
| | - Joseph Ponniah S
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, Bhubaneswar 752050, Odisha, India
| | - Krishnan Venkatasubbaiah
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, HBNI, Bhubaneswar 752050, Odisha, India
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32
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Chutora T, de la Torre B, Mutombo P, Hellerstedt J, Kopeček J, Jelínek P, Švec M. Nitrous oxide as an effective AFM tip functionalization: a comparative study. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2019; 10:315-321. [PMID: 30800570 PMCID: PMC6369984 DOI: 10.3762/bjnano.10.30] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Accepted: 01/07/2019] [Indexed: 05/14/2023]
Abstract
We investigate the possibility of functionalizing Au tips by N2O molecules deposited on a Au(111) surface and their further use for imaging with submolecular resolution. First, we characterize the adsorption of the N2O species on Au(111) by means of atomic force microscopy with CO-functionalized tips and density functional theory (DFT) simulations. Subsequently we devise a method of attaching a single N2O to a metal tip apex and benchmark its high-resolution imaging and spectroscopic capabilities using FePc molecules. Our results demonstrate the feasibility of high-resolution imaging. However, we find an inherent asymmetry of the N2O probe-particle adsorption on the tip apex, in contrast to a CO tip reference. These findings are consistent with DFT calculations of the N2O- and CO tip apexes.
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Affiliation(s)
- Taras Chutora
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic
| | - Bruno de la Torre
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
| | - Pingo Mutombo
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
| | - Jack Hellerstedt
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
| | - Jaromír Kopeček
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
| | - Pavel Jelínek
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
| | - Martin Švec
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371 Olomouc, Czech Republic
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 162 00 Prague, Czech Republic
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33
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Li J, Sanz S, Corso M, Choi DJ, Peña D, Frederiksen T, Pascual JI. Single spin localization and manipulation in graphene open-shell nanostructures. Nat Commun 2019; 10:200. [PMID: 30643120 PMCID: PMC6331630 DOI: 10.1038/s41467-018-08060-6] [Citation(s) in RCA: 98] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Accepted: 12/11/2018] [Indexed: 11/09/2022] Open
Abstract
Turning graphene magnetic is a promising challenge to make it an active material for spintronics. Predictions state that graphene structures with specific shapes can spontaneously develop magnetism driven by Coulomb repulsion of π-electrons, but its experimental verification is demanding. Here, we report on the observation and manipulation of individual magnetic moments in graphene open-shell nanostructures on a gold surface. Using scanning tunneling spectroscopy, we detect the presence of single electron spins localized around certain zigzag sites of the carbon backbone via the Kondo effect. We find near-by spins coupled into a singlet ground state and quantify their exchange interaction via singlet-triplet inelastic electron excitations. Theoretical simulations picture how electron correlations result in spin-polarized radical states with the experimentally observed spatial distributions. Extra hydrogen atoms bound to radical sites quench their magnetic moment and switch the spin of the nanostructure in half-integer amounts. Our work demonstrates the intrinsic π-paramagnetism of graphene nanostructures.
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Affiliation(s)
- Jingcheng Li
- CIC nanoGUNE, 20018, Donostia-San Sebastián, Spain
| | - Sofia Sanz
- Donostia International Physics Center (DIPC), 20018, Donostia-San Sebastián, Spain
| | - Martina Corso
- Donostia International Physics Center (DIPC), 20018, Donostia-San Sebastián, Spain.,Centro de Física de Materiales CFM/MPC (CSIC-UPV/EHU), 20018, Donostia-San Sebastián, Spain
| | - Deung Jang Choi
- Donostia International Physics Center (DIPC), 20018, Donostia-San Sebastián, Spain.,Centro de Física de Materiales CFM/MPC (CSIC-UPV/EHU), 20018, Donostia-San Sebastián, Spain.,Ikerbasque, Basque Foundation for Science, 48013, Bilbao, Spain
| | - Diego Peña
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, 15782, Spain
| | - Thomas Frederiksen
- Donostia International Physics Center (DIPC), 20018, Donostia-San Sebastián, Spain.,Ikerbasque, Basque Foundation for Science, 48013, Bilbao, Spain
| | - Jose Ignacio Pascual
- CIC nanoGUNE, 20018, Donostia-San Sebastián, Spain. .,Ikerbasque, Basque Foundation for Science, 48013, Bilbao, Spain.
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34
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Polyyne formation via skeletal rearrangement induced by atomic manipulation. Nat Chem 2018; 10:853-858. [PMID: 29967394 PMCID: PMC6071858 DOI: 10.1038/s41557-018-0067-y] [Citation(s) in RCA: 74] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Accepted: 04/17/2018] [Indexed: 12/02/2022]
Abstract
Rearrangements that change the connectivity of a carbon skeleton are often useful in synthesis, but it can be difficult to follow their mechanisms. Scanning probe microscopy can be used to manipulate a skeletal rearrangement at the single-molecule level, while monitoring the geometry of reactants, intermediates and final products with atomic resolution. We studied the reductive rearrangement of 1,1-dibromo alkenes to polyynes on a NaCl surface at 5 K, a reaction that resembles the Fritsch–Buttenberg–Wiechell (FBW) rearrangement. Voltage pulses were used to cleave one C–Br bond, forming a radical, then to cleave the remaining C•–Br bond triggering the rearrangement. These experiments provide structural insight into the bromo-vinyl radical intermediates, showing that the C=C•–Br unit is nonlinear. Long polyynes, up to the octayne Ph–(C≡C)8–Ph, have been prepared in this way. The control of skeletal rearrangements opens a new window on carbon-rich materials and extends the toolbox for molecular synthesis by atom manipulation.
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35
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Uehara K, Mei P, Murayama T, Tani F, Hayashi H, Suzuki M, Aratani N, Yamada H. An Anomalous Antiaromaticity That Arises from the Cycloheptatrienyl Anion Equivalent. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800769] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Keiji Uehara
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Peifeng Mei
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Tomohisa Murayama
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Fumito Tani
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka, Nishi‐ku 819‐0395 Fukuoka Japan
| | - Hironobu Hayashi
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Mitsuharu Suzuki
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Naoki Aratani
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
| | - Hiroko Yamada
- Division of Materials Science Nara Institute of Science and Technology (NAIST) 8916‐5 Tkayama‐cho 630‐0192 Ikoma, Nara Japan
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36
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Tang X, Du A, Kou L. Gas sensing and capturing based on two‐dimensional layered materials: Overview from theoretical perspective. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2018. [DOI: 10.1002/wcms.1361] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Xiao Tang
- School of Chemistry, Physics and Mechanical Engineering FacultyQueensland University of TechnologyBrisbaneAustralia
| | - Aijun Du
- School of Chemistry, Physics and Mechanical Engineering FacultyQueensland University of TechnologyBrisbaneAustralia
| | - Liangzhi Kou
- School of Chemistry, Physics and Mechanical Engineering FacultyQueensland University of TechnologyBrisbaneAustralia
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37
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Liu K, Lalancette RA, Jäkle F. B–N Lewis Pair Functionalization of Anthracene: Structural Dynamics, Optoelectronic Properties, and O2 Sensitization. J Am Chem Soc 2017; 139:18170-18173. [DOI: 10.1021/jacs.7b11062] [Citation(s) in RCA: 116] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Kanglei Liu
- Department of Chemistry, Rutgers University Newark, Newark, New Jersey 07102, United States
| | - Roger A. Lalancette
- Department of Chemistry, Rutgers University Newark, Newark, New Jersey 07102, United States
| | - Frieder Jäkle
- Department of Chemistry, Rutgers University Newark, Newark, New Jersey 07102, United States
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