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Baronio S, Bassotti M, Armillotta F, Frampton E, Vinogradov NA, Schio L, Floreano L, Verdini A, Vesselli E. Stabilization versus competing de-metalation, trans-metalation and (cyclo)-dehydrogenation of Pd porphyrins at a copper surface. NANOSCALE 2024; 16:13416-13424. [PMID: 38895999 DOI: 10.1039/d4nr00699b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Metal-porphyrins are studied intensively due their potential applications, deriving from the variety of electronic and chemical properties, tunable by selecting metal centers and functional groups. Metalation, de- and trans-metalation processes are fundamental in this sense to investigate both the synthesis and the stability of these molecular building blocks. More specifically, Pd coordination in tetrapyrroles revealed to be potentially interesting in the fields of cancer therapy, drug delivery and light harvesting. Thus, we focused on the stability of palladium tetraphenyl porphyrins (PdTPPs) on a copper surface by means of combined spectroscopy and microscopy approaches. We find that PdTPPs undergo coverage-dependent trans-metalation accompanied by steric rearrangements already at room temperature, and fully trans-metalate to CuTPPs upon mild annealing. Side reactions such as (cyclo)-dehydrogenation and structural reorganization affect the molecular layer, with Pd-Cu alloying and segregation occurring at higher temperature. Instead, oxygen passivation of the Cu support prevents the metal-involving reactions, thus preserving the layer and increasing the chemical and temperature stability of the Pd porphyrins.
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Affiliation(s)
| | - Mattia Bassotti
- Department of Physics, University of Perugia, Perugia, Italy
| | - Francesco Armillotta
- Department of Physics, University of Trieste, Trieste, Italy
- Institute of Physics Ecole Polytechnique Fédérale de Lausanne (EPFL) Station 3, Lausanne, Switzerland
| | | | | | - Luca Schio
- CNR-IOM - Istituto Officina dei Materiali, Area Science Park, Trieste, Italy.
| | - Luca Floreano
- CNR-IOM - Istituto Officina dei Materiali, Area Science Park, Trieste, Italy.
| | - Alberto Verdini
- Department of Physics, University of Perugia, Perugia, Italy
- CNR-IOM - Istituto Officina dei Materiali, Area Science Park, Trieste, Italy.
| | - Erik Vesselli
- Department of Physics, University of Trieste, Trieste, Italy
- CNR-IOM - Istituto Officina dei Materiali, Area Science Park, Trieste, Italy.
- Center for Energy, Environment and Transport Giacomo Ciamician, University of Trieste, Trieste, Italy
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2
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Liu Y, Du J, Zhang K, Gao K, Xue H, Fang X, Song K, Liu F. Orientation-Dependent Mechanical Behaviors of BCC-Fe in Light of the Thermo-Kinetic Synergy of Plastic Deformation. MATERIALS (BASEL, SWITZERLAND) 2024; 17:2395. [PMID: 38793462 PMCID: PMC11122783 DOI: 10.3390/ma17102395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 05/12/2024] [Accepted: 05/15/2024] [Indexed: 05/26/2024]
Abstract
The orientation-dependent mechanical behaviors of metallic alloys are governed by deformation mechanisms, but the underlying physics remain to be explored. In this work, the mechanical responses along different orientations and behind the mechanisms of BCC-Fe are investigated by performing molecular dynamic simulations. It is found that the mechanical properties of BCC-Fe exhibit apparent anisotropic characteristics. The <100>-oriented BCC-Fe presents a Young's modulus of E = 147.56 GPa, a strength of σy = 10.15 GPa, and a plastic strain of εy = 0.084 at the yield point, whereas the <111> orientation presents E = 244.84 GPa, σy = 27.57 GPa, and εy = 0.21. Based on classical dislocation theory, the reasons for such orientation-dependent mechanical behaviors are analyzed from the perspective of thermo-kinetic synergy upon deformation. It turns out that the anisotropic mechanical responses of BCC-Fe are associated with the magnitude of the thermodynamic driving force (ΔG) and kinetic energy barrier (Q) for dislocation motion, which dominate the corresponding deformation mechanism. Compared with the low ΔG (6.395 GPa) and high Q (11.95 KJ/mol) of the <100>-oriented BCC-Fe dominated by deformation twinning, the <111> orientation governed by dislocation slip presents a high ΔG (17.37 GPa) and low Q (6.45 KJ/mol). Accordingly, the orientation-dependent deformation behaviors of BCC-Fe are derived from the thermo-kinetic synergy for dislocation motion.
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Affiliation(s)
- Yu Liu
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi’an 710072, China
| | - Jinglian Du
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi’an 710072, China
| | - Kunyu Zhang
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi’an 710072, China
| | - Kangxu Gao
- Analytical & Testing Center, Northwestern Polytechnical University, Xi’an 710072, China
| | - Haotian Xue
- Analytical & Testing Center, Northwestern Polytechnical University, Xi’an 710072, China
| | - Xiao Fang
- Analytical & Testing Center, Northwestern Polytechnical University, Xi’an 710072, China
| | - Kexing Song
- Henan Academy of Sciences, Zhengzhou 450046, China
| | - Feng Liu
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi’an 710072, China
- Analytical & Testing Center, Northwestern Polytechnical University, Xi’an 710072, China
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3
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Zhang H, Gu H, Shi G, Yu K, Yang C, Tong H, Zhao S, Chang M, Zhu C, Chen C, Zhang L. Two-Dimensional Covalent Framework Derived Nonprecious Transition Metal Single-Atomic-Site Electrocatalyst toward High-Efficiency Oxygen Reduction. NANO LETTERS 2023; 23:3803-3809. [PMID: 37103954 DOI: 10.1021/acs.nanolett.3c00133] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Designing an active, stable, and nonprecious metal catalyst substitute for Pt in the oxygen reduction reaction (ORR) is highly demanded for energy-efficient and cost-effective prototype devices. Single-atomic-site catalysts (SASCs) have been widely concerning because of their maximum atomic utilization and precise structural regulation. Despite being challenging, the controllable synthesis of SASCs is crucial for optimizing ORR activity. Here, we demonstrate an ultrathin organometallic framework template-assisted pyrolysis strategy to synthesize SASCs with a unique two-dimensional (2D) architecture. Electrochemical measurements revealed that Fe-SASCs displayed an excellent ORR activity in an alkaline media, having a half-wave potential and a diffusion-limited current density comparable to those of commercial Pt/C. Remarkably, the durability and methanol tolerance of Fe-SASCs were even superior to those of Pt/C. Furthermore, Fe-SASCs displayed a maximum power density of 142 mW cm-2 with a current density of 235 mA cm-2 as a cathode catalyst in a zinc-air battery, showing its great potential for practical applications.
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Affiliation(s)
- Honghao Zhang
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Huoliang Gu
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Guoshuai Shi
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Ke Yu
- Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Chunlei Yang
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Haonan Tong
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Siwen Zhao
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Mingwei Chang
- College of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Chenyuan Zhu
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Chen Chen
- Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Liming Zhang
- Department of Chemistry, iChEM (Collaborative Innovation Center of Chemistry for Energy Materials) and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
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4
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Noh K, Colazzo L, Urdaniz C, Lee J, Krylov D, Devi P, Doll A, Heinrich AJ, Wolf C, Donati F, Bae Y. Template-directed 2D nanopatterning of S = 1/2 molecular spins. NANOSCALE HORIZONS 2023; 8:624-631. [PMID: 36752198 DOI: 10.1039/d2nh00375a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Molecular spins are emerging platforms for quantum information processing. By chemically tuning their molecular structure, it is possible to prepare a robust environment for electron spins and drive the assembly of a large number of qubits in atomically precise spin-architectures. The main challenges in the integration of molecular qubits into solid-state devices are (i) minimizing the interaction with the supporting substrate to suppress quantum decoherence and (ii) controlling the spatial distribution of the spins at the nanometer scale to tailor the coupling among qubits. Herein, we provide a nanofabrication method for the realization of a 2D patterned array of individually addressable Vanadyl Phthalocyanine (VOPc) spin qubits. The molecular nanoarchitecture is crafted on top of a diamagnetic monolayer of Titanyl Phthalocyanine (TiOPc) that electronically decouples the electronic spin of VOPc from the underlying Ag(100) substrate. The isostructural TiOPc interlayer also serves as a template to regulate the spacing between VOPc spin qubits on a scale of a few nanometers, as demonstrated using scanning tunneling microscopy, X-ray circular dichroism, and density functional theory. The long-range molecular ordering is due to a combination of charge transfer from the metallic substrate and strain in the TiOPc interlayer, which is attained without altering the pristine VOPc spin characteristics. Our results pave a viable route towards the future integration of molecular spin qubits into solid-state devices.
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Affiliation(s)
- Kyungju Noh
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Luciano Colazzo
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Corina Urdaniz
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Jaehyun Lee
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Denis Krylov
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Parul Devi
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Andrin Doll
- Swiss Light Source (SLS), Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - Andreas J Heinrich
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Christoph Wolf
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Fabio Donati
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
| | - Yujeong Bae
- Center for Quantum Nanoscience (QNS), Institute of Basic Science (IBS), 03760 Seoul, Republic of Korea.
- Department of Physics, Ewha Womans University, 03760 Seoul, Republic of Korea
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5
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Orellana W, Zuñiga C, Gatica A, Ureta-Zanartu MS, Zagal JH, Tasca F. Effect of Electrolyte Media on the Catalysis of Fe Phthalocyanine toward the Oxygen Reduction Reaction: Ab Initio Molecular Dynamics Simulations and Experimental Analyses. ACS Catal 2022. [DOI: 10.1021/acscatal.2c03298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Walter Orellana
- Departamento de Ciencias Físicas, Universidad Andres Bello, Sazié 2212, Santiago837-0136, Chile
| | - Cesar Zuñiga
- Facultad de Química y Biología, Universidad de Santiago de Chile, Av. Libertador Bernardo O’Higgins 3363, Santiago837-0136, Chile
| | - Angelica Gatica
- Facultad de Química y Biología, Universidad de Santiago de Chile, Av. Libertador Bernardo O’Higgins 3363, Santiago837-0136, Chile
| | - Maria-Soledad Ureta-Zanartu
- Facultad de Química y Biología, Universidad de Santiago de Chile, Av. Libertador Bernardo O’Higgins 3363, Santiago837-0136, Chile
| | - Jose H. Zagal
- Facultad de Química y Biología, Universidad de Santiago de Chile, Av. Libertador Bernardo O’Higgins 3363, Santiago837-0136, Chile
| | - Federico Tasca
- Facultad de Química y Biología, Universidad de Santiago de Chile, Av. Libertador Bernardo O’Higgins 3363, Santiago837-0136, Chile
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6
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Wang Y, Zhou T, Ruan S, Feng H, Bi W, Hu J, Chen T, Liu H, Yuan B, Zhang N, Wang W, Zhang L, Chu W, Wu C, Xie Y. Directional Manipulation of Electron Transfer by Energy Level Engineering for Efficient Cathodic Oxygen Reduction. NANO LETTERS 2022; 22:6622-6630. [PMID: 35931416 DOI: 10.1021/acs.nanolett.2c01933] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Electron transfer plays an important role in determining the energy conversion efficiency of energy devices. Nitrogen-coordinated single metal sites (M-N4) materials as electrocatalysts have exhibited great potential in devices. However, there are still great difficulties in how to directionally manipulate electron transfer in M-N4 catalysts for higher efficiency. Herein, we demonstrated the mechanism of electron transfer being affected by energy level structure based on classical iron phthalocyanine (FePc) molecule/carbon models and proposed an energy level engineering strategy to manipulate electron transfer, preparing high-performance ORR catalysts. Engineering molecular energy level via modulating FePc molecular structure with nitro induces a strong interfacial electronic coupling and efficient charge transfer from carbon to FePc-β-NO2 molecule. Consequently, the assembled zinc-air battery exhibits ultrahigh performance which is superior to most of M-N4 catalysts. Energy level engineering provides a universal approach for directionally manipulating electron transfer, bringing a new concept to design efficient and stable M-N4 electrocatalyst.
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Affiliation(s)
- Yang Wang
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Tianpei Zhou
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Shanshan Ruan
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Hu Feng
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Wentuan Bi
- Institute of Energy, Hefei Comprehensive National Science Center, Hefei, Anhui 230026, P. R. China
| | - Jun Hu
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Ting Chen
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Hongfei Liu
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Bingkai Yuan
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Nan Zhang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Wenjie Wang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Lidong Zhang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Wangsheng Chu
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Changzheng Wu
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
- Institute of Energy, Hefei Comprehensive National Science Center, Hefei, Anhui 230026, P. R. China
| | - Yi Xie
- School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
- Institute of Energy, Hefei Comprehensive National Science Center, Hefei, Anhui 230026, P. R. China
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7
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Zhang C, Kazuma E, Kim Y. Steering the Reaction Pathways of Terminal Alkynes by Introducing Oxygen Species: From C-C Coupling to C-H Activation. J Am Chem Soc 2022; 144:10282-10290. [PMID: 35587810 DOI: 10.1021/jacs.2c01026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Selective regulation of chemical reactions is crucial in chemistry. Oxygen, as a key reagent in ubiquitous oxidative chemistry, exhibits great potential in regulating molecular assemblies, and more importantly, chemical reactions in molecular systems supported by metal surfaces. However, the unique catalytic performance and reaction mechanisms of oxygen species remain elusive, which are essential for understanding reaction selection and regulation. In this study, by a combination of scanning tunneling microscopy (STM) imaging/manipulations and density functional theory (DFT) calculations, we showed that the on-surface reaction pathways of terminal alkynes could be steered from C-C coupling to C-H activation with high selectivity by introducing O2 into the molecular system. The catalytic performance and reaction mechanisms of oxygen species were explored in the C-H activation processes, and both molecular O2 and atomic O could efficiently steer the reaction pathways. These results would provide a fundamental understanding of interfacial catalytic reaction processes.
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Affiliation(s)
- Chi Zhang
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.,Interdisciplinary Materials Research Center, College of Materials Science and Engineering, Tongji University, Caoan Road 4800, Shanghai 201804, People's Republic of China
| | - Emiko Kazuma
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.,Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - Yousoo Kim
- Surface and Interface Science Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.,Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
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8
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Stredansky M, Moro S, Corva M, Sturmeit H, Mischke V, Janas D, Cojocariu I, Jugovac M, Cossaro A, Verdini A, Floreano L, Feng Z, Sala A, Comelli G, Windischbacher A, Puschnig P, Hohner C, Kettner M, Libuda J, Cinchetti M, Schneider CM, Feyer V, Vesselli E, Zamborlini G. Disproportionation of Nitric Oxide at a Surface-Bound Nickel Porphyrinoid. Angew Chem Int Ed Engl 2022; 61:e202201916. [PMID: 35267236 PMCID: PMC9314816 DOI: 10.1002/anie.202201916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Indexed: 11/28/2022]
Abstract
Uncommon metal oxidation states in porphyrinoid cofactors are responsible for the activity of many enzymes. The F430 and P450nor co-factors, with their reduced NiI - and FeIII -containing tetrapyrrolic cores, are prototypical examples of biological systems involved in methane formation and in the reduction of nitric oxide, respectively. Herein, using a comprehensive range of experimental and theoretical methods, we raise evidence that nickel tetraphenyl porphyrins deposited in vacuo on a copper surface are reactive towards nitric oxide disproportionation at room temperature. The interpretation of the measurements is far from being straightforward due to the high reactivity of the different nitrogen oxides species (eventually present in the residual gas background) and of the possible reaction intermediates. The picture is detailed in order to disentangle the challenging complexity of the system, where even a small fraction of contamination can change the scenario.
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Affiliation(s)
- Matus Stredansky
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Stefania Moro
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
| | - Manuel Corva
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | | | - David Janas
- Department of PhysicsTU Dortmund UniversityDortmundGermany
| | - Iulia Cojocariu
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
| | - Matteo Jugovac
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
| | - Albano Cossaro
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
- Department of Chemistry and Pharmaceutical ScienceUniversity of Triestevia L-Giorgieri 134127TriesteItaly
| | | | - Luca Floreano
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Zhijing Feng
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | - Giovanni Comelli
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | - Peter Puschnig
- Institut für PhysikKarl-Franzens-Universität Graz8010GrazAustria
| | - Chantal Hohner
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Miroslav Kettner
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Jörg Libuda
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | | | - Claus Michael Schneider
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
- Fakultät f. Physik and Center for Nanointegration Duisburg-Essen (CENIDE)Universität Duisburg-Essen47048DuisburgGermany
| | - Vitaliy Feyer
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
- Fakultät f. Physik and Center for Nanointegration Duisburg-Essen (CENIDE)Universität Duisburg-Essen47048DuisburgGermany
| | - Erik Vesselli
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Giovanni Zamborlini
- Department of PhysicsTU Dortmund UniversityDortmundGermany
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
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9
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Stredansky M, Moro S, Corva M, Sturmeit H, Mischke V, Janas D, Cojocariu I, Jugovac M, Cossaro A, Verdini A, Floreano L, Feng Z, Sala A, Comelli G, Windischbacher A, Puschnig P, Hohner C, Kettner M, Libuda J, Cinchetti M, Schneider CM, Feyer V, Vesselli E, Zamborlini G. Disproportionation of Nitric Oxide at a Surface-Bound Nickel Porphyrinoid. ANGEWANDTE CHEMIE (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022; 134:e202201916. [PMID: 38505699 PMCID: PMC10947138 DOI: 10.1002/ange.202201916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Indexed: 11/07/2022]
Abstract
Uncommon metal oxidation states in porphyrinoid cofactors are responsible for the activity of many enzymes. The F430 and P450nor co-factors, with their reduced NiI- and FeIII-containing tetrapyrrolic cores, are prototypical examples of biological systems involved in methane formation and in the reduction of nitric oxide, respectively. Herein, using a comprehensive range of experimental and theoretical methods, we raise evidence that nickel tetraphenyl porphyrins deposited in vacuo on a copper surface are reactive towards nitric oxide disproportionation at room temperature. The interpretation of the measurements is far from being straightforward due to the high reactivity of the different nitrogen oxides species (eventually present in the residual gas background) and of the possible reaction intermediates. The picture is detailed in order to disentangle the challenging complexity of the system, where even a small fraction of contamination can change the scenario.
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Affiliation(s)
- Matus Stredansky
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Stefania Moro
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
| | - Manuel Corva
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | | | - David Janas
- Department of PhysicsTU Dortmund UniversityDortmundGermany
| | - Iulia Cojocariu
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
| | - Matteo Jugovac
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
| | - Albano Cossaro
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
- Department of Chemistry and Pharmaceutical ScienceUniversity of Triestevia L-Giorgieri 134127TriesteItaly
| | | | - Luca Floreano
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Zhijing Feng
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | - Giovanni Comelli
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | | | - Peter Puschnig
- Institut für PhysikKarl-Franzens-Universität Graz8010GrazAustria
| | - Chantal Hohner
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Miroslav Kettner
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | - Jörg Libuda
- Erlangen Center for Interface Research and CatalysisFriedrich-Alexander-Universität Erlangen-NürnbergEgerlandstr. 391058ErlangenGermany
| | | | - Claus Michael Schneider
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
- Fakultät f. Physik and Center for Nanointegration Duisburg-Essen (CENIDE)Universität Duisburg-Essen47048DuisburgGermany
| | - Vitaliy Feyer
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
- Fakultät f. Physik and Center for Nanointegration Duisburg-Essen (CENIDE)Universität Duisburg-Essen47048DuisburgGermany
| | - Erik Vesselli
- Physics DepartmentUniversity of Triestevia A. Valerio 234127TriesteItaly
- CNR-IOM, Area Science ParkS.S. 14 km 163,534149TriesteItaly
| | - Giovanni Zamborlini
- Department of PhysicsTU Dortmund UniversityDortmundGermany
- Peter Grünberg Institute (PGI-6)Forschungszentrum Jülich GmbHJülichGermany
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10
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Tao L, Zhang Y, Du S. Structures and electronic properties of functional molecules on metal substrates: From single molecule to self‐assemblies. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2021. [DOI: 10.1002/wcms.1591] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Lei Tao
- Institute of Physics and University of Chinese Academy of Sciences Chinese Academy of Sciences Beijing China
| | - Yu‐yang Zhang
- Institute of Physics and University of Chinese Academy of Sciences Chinese Academy of Sciences Beijing China
- CAS Center for Excellence in Topological Quantum Computation Beijing China
| | - Shixuan Du
- Institute of Physics and University of Chinese Academy of Sciences Chinese Academy of Sciences Beijing China
- CAS Center for Excellence in Topological Quantum Computation Beijing China
- Beijing National Laboratory for Condensed Matter Physics Beijing China
- Songshan Lake Materials Laboratory Dongguan China
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11
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Li Y, Wang N, Lei H, Li X, Zheng H, Wang H, Zhang W, Cao R. Bioinspired N4-metallomacrocycles for electrocatalytic oxygen reduction reaction. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.213996] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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12
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Zhu L, Li B, Dong L, Feng W, Zhao AD, Wang B. Controlling metalation reaction of phthalocyanine with cobalt at single-molecule level on Au(111) surface. CHINESE J CHEM PHYS 2021. [DOI: 10.1063/1674-0068/cjcp22105098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Liang Zhu
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Bin Li
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Lei Dong
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Wei Feng
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Ai-di Zhao
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Bing Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information & Quantum Physics, University of Science and Technology of China, Hefei 230026, China
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13
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Wang X, Wang YQ, Feng YC, Wang D, Wan LJ. Insights into electrocatalysis by scanning tunnelling microscopy. Chem Soc Rev 2021; 50:5832-5849. [PMID: 34027957 DOI: 10.1039/d0cs01078b] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Understanding the mechanism of electrocatalytic reaction is important for the design and development of highly efficient electrocatalysts for energy technology. Investigating the surface structures of electrocatalysts and the surface processes in electrocatalytic reactions at the atomic and molecular scale is helpful to identify the catalytic role of active sites and further promotes the development of emerging electrocatalysts. Since it was invented, scanning tunnelling microscopy (STM) has become a powerful technique to investigate surface topographies and electronic properties at the nanoscale resolution. STM can be operated in diversified environments. Electrochemical STM can be used to investigate the surface processes during electrochemical reactions. Moreover, the critical intermediates in catalysis on catalyst surfaces can be identified by STM at low temperature or ultrahigh vacuum. STM has been extensively utilized in electrocatalysis research, including the structure-activity relationship of electrocatalysts, the distribution of active sites, and surface processes in electrocatalytic reactions. In this review, progress in the application of STM in electrocatalysis is systematically discussed. The construction of model electrocatalysts and electrocatalytic systems are summarized. Then, we present the STM investigation of electrocatalyst structures and surface processes related to electrocatalysis. Challenges and future developments in the field are discussed in the outlook.
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Affiliation(s)
- Xiang Wang
- CAS Key Laboratory of Molecular Nanostructure and Nanotechnology, CAS Research/Education Center for Excellence in Molecular Sciences, Beijing National Laboratory for Molecular Science (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. and University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yu-Qi Wang
- CAS Key Laboratory of Molecular Nanostructure and Nanotechnology, CAS Research/Education Center for Excellence in Molecular Sciences, Beijing National Laboratory for Molecular Science (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. and University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ya-Chen Feng
- CAS Key Laboratory of Molecular Nanostructure and Nanotechnology, CAS Research/Education Center for Excellence in Molecular Sciences, Beijing National Laboratory for Molecular Science (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. and University of Chinese Academy of Sciences, Beijing 100049, China
| | - Dong Wang
- CAS Key Laboratory of Molecular Nanostructure and Nanotechnology, CAS Research/Education Center for Excellence in Molecular Sciences, Beijing National Laboratory for Molecular Science (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. and University of Chinese Academy of Sciences, Beijing 100049, China
| | - Li-Jun Wan
- CAS Key Laboratory of Molecular Nanostructure and Nanotechnology, CAS Research/Education Center for Excellence in Molecular Sciences, Beijing National Laboratory for Molecular Science (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China. and University of Chinese Academy of Sciences, Beijing 100049, China
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14
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Vesselli E. Stabilization and activation of molecular oxygen at biomimetic tetrapyrroles on surfaces: from UHV to near-ambient pressure. NANOSCALE ADVANCES 2021; 3:1319-1330. [PMID: 36132852 PMCID: PMC9417665 DOI: 10.1039/d0na00827c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 01/30/2021] [Indexed: 05/13/2023]
Abstract
Recent advances in the development of surface science methods have allowed bridging, at least partially, the pressure gap between the ultra-high vacuum environment and some applicative conditions. This step has been particularly critical for the characterization of heterogenous catalytic systems (solid-liquid, solid-gas interfaces) and, specifically, of the electronic, structural, and chemical properties of tetrapyrroles at surfaces when arranged in 2D networks. Within a biomimetic picture, in which 2D metalorganic frameworks are expected to model and reproduce in a tailored way the activity of their biochemical proteic counterparts, the fundamental investigation of the adsorption and activation of small ligands at the single-metal atom reaction sites has progressively gained increasing attention. Concerning oxygen, biology offers a variety of tetrapyrrole-based transport and reaction pockets, as e.g. in haemoglobin, myoglobin or cytochrome proteins. Binding and activation of O2 are accomplished thanks to complex charge transfer and spin realignment processes, sometimes requiring cooperative mechanisms. Within the framework of surface science at near-ambient pressure (towards and beyond the mbar regime), recent progress has unveiled novel and interesting properties of 2D metalorganic frameworks and heterostacks based on self-assembled tetrapyrroles, thus opening possible, effective applicative routes in the fields of light harvesting, heterogenous (electro-)catalysts, chemical sensing, and spintronics.
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Affiliation(s)
- Erik Vesselli
- Department of Physics, University of Trieste Via A. Valerio 2 34127 Trieste Italy
- CNR-IOM Area Science Park, S.S. 14 km 163.5 34149 Basovizza Trieste Italy
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15
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Cojocariu I, Carlotto S, Sturmeit HM, Zamborlini G, Cinchetti M, Cossaro A, Verdini A, Floreano L, Jugovac M, Puschnig P, Piamonteze C, Casarin M, Feyer V, Schneider CM. Ferrous to Ferric Transition in Fe-Phthalocyanine Driven by NO 2 Exposure. Chemistry 2021; 27:3526-3535. [PMID: 33264485 PMCID: PMC7898877 DOI: 10.1002/chem.202004932] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Indexed: 01/10/2023]
Abstract
Due to its unique magnetic properties offered by the open‐shell electronic structure of the central metal ion, and for being an effective catalyst in a wide variety of reactions, iron phthalocyanine has drawn significant interest from the scientific community. Nevertheless, upon surface deposition, the magnetic properties of the molecular layer can be significantly affected by the coupling occurring at the interface, and the more reactive the surface, the stronger is the impact on the spin state. Here, we show that on Cu(100), indeed, the strong hybridization between the Fe d‐states of FePc and the sp‐band of the copper substrate modifies the charge distribution in the molecule, significantly influencing the magnetic properties of the iron ion. The FeII ion is stabilized in the low singlet spin state (S=0), leading to the complete quenching of the molecule magnetic moment. By exploiting the FePc/Cu(100) interface, we demonstrate that NO2 dissociation can be used to gradually change the magnetic properties of the iron ion, by trimming the gas dosage. For lower doses, the FePc film is decoupled from the copper substrate, restoring the gas phase triplet spin state (S=1). A higher dose induces the transition from ferrous to ferric phthalocyanine, in its intermediate spin state, with enhanced magnetic moment due to the interaction with the atomic ligands. Remarkably, in this way, three different spin configurations have been observed within the same metalorganic/metal interface by exposing it to different doses of NO2 at room temperature.
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Affiliation(s)
- Iulia Cojocariu
- Peter Grünberg Institute (PGI-6), Forschungszentrum Jülich GmbH, Leo-Brandt-Straße, 52428, Jülich, Germany
| | - Silvia Carlotto
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131, Padova, Italy
| | | | - Giovanni Zamborlini
- Technische Universität Dortmund, Experimentelle Physik VI, Otto-Hahn-Straße 4, 44227, Dortmund, Germany
| | - Mirko Cinchetti
- Technische Universität Dortmund, Experimentelle Physik VI, Otto-Hahn-Straße 4, 44227, Dortmund, Germany
| | - Albano Cossaro
- CNR-IOM, Lab. TASC, S.S. 14, Km. 163,5, 34149, Trieste, Italy
| | - Alberto Verdini
- CNR-IOM, Lab. TASC, S.S. 14, Km. 163,5, 34149, Trieste, Italy
| | - Luca Floreano
- CNR-IOM, Lab. TASC, S.S. 14, Km. 163,5, 34149, Trieste, Italy
| | - Matteo Jugovac
- Peter Grünberg Institute (PGI-6), Forschungszentrum Jülich GmbH, Leo-Brandt-Straße, 52428, Jülich, Germany.,Present address: Istituto di Struttura della Materia-CNR (ISM-CNR), S.S. 14, Km. 163,5, 34149, Trieste, Italy
| | - Peter Puschnig
- Institute of Physics, University of Graz, NAWI Graz, Universitätsplatz 5, 8010, Graz, Austria
| | - Cinthia Piamonteze
- Swiss Light Source, Paul Scherrer Institute, 5232, Villigen PSI, Switzerland
| | - Maurizio Casarin
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131, Padova, Italy
| | - Vitaliy Feyer
- Peter Grünberg Institute (PGI-6), Forschungszentrum Jülich GmbH, Leo-Brandt-Straße, 52428, Jülich, Germany.,Fakultät für Physik and Center for Nanointegration Duisburg-Essen (CENIDE), Universität Duisburg-Essen, Carl-Benz-Straße 199, 47047, Duisburg, Germany
| | - Claus Michael Schneider
- Peter Grünberg Institute (PGI-6), Forschungszentrum Jülich GmbH, Leo-Brandt-Straße, 52428, Jülich, Germany.,Fakultät für Physik and Center for Nanointegration Duisburg-Essen (CENIDE), Universität Duisburg-Essen, Carl-Benz-Straße 199, 47047, Duisburg, Germany
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16
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Abstract
Abstract
Scanning tunneling microscopy (STM) has gained increasing attention in the field of electrocatalysis due to its ability to reveal electrocatalyst surface structures down to the atomic level in either ultra-high-vacuum (UHV) or harsh electrochemical conditions. The detailed knowledge of surface structures, surface electronic structures, surface active sites as well as the interaction between surface adsorbates and electrocatalysts is highly beneficial in the study of electrocatalytic mechanisms and for the rational design of electrocatalysts. Based on this, this review will discuss the application of STM in the characterization of electrocatalyst surfaces and the investigation of electrochemical interfaces between electrocatalyst surfaces and reactants. Based on different operating conditions, UHV-STM and STM in electrochemical environments (EC-STM) are discussed separately. This review will also present emerging techniques including high-speed EC-STM, scanning noise microscopy and tip-enhanced Raman spectroscopy.
Graphic Abstract
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17
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Carlotto S, Sambi M, Sedona F, Vittadini A, Casarin M. A Theoretical Study of the Occupied and Unoccupied Electronic Structure of High- and Intermediate-Spin Transition Metal Phthalocyaninato (Pc) Complexes: VPc, CrPc, MnPc, and FePc. NANOMATERIALS 2020; 11:nano11010054. [PMID: 33379291 PMCID: PMC7824030 DOI: 10.3390/nano11010054] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 12/18/2020] [Accepted: 12/22/2020] [Indexed: 11/16/2022]
Abstract
The structural, electronic, and spectroscopic properties of high- and intermediate-spin transition metal phthalocyaninato complexes (MPc; M = V, Cr, Mn and Fe) have been theoretically investigated to look into the origin, symmetry and strength of the M–Pc bonding. DFT calculations coupled to the Ziegler’s extended transition state method and to an advanced charge density and bond order analysis allowed us to assess that the M–Pc bonding is dominated by σ interactions, with FePc having the strongest and most covalent M–Pc bond. According to experimental evidence, the lightest MPcs (VPc and CrPc) have a high-spin ground state (GS), while the MnPc and FePc GS spin is intermediate. Insights into the MPc unoccupied electronic structure have been gained by modelling M L2,3-edges X-ray absorption spectroscopy data from the literature through the exploitation of the current Density Functional Theory variant of the Restricted Open-Shell Configuration Interaction Singles (DFT/ROCIS) method. Besides the overall agreement between theory and experiment, the DFT/ROCIS results indicate that spectral features lying at the lowest excitation energies (EEs) are systematically generated by electronic states having the same GS spin multiplicity and involving M-based single electronic excitations; just as systematically, the L3-edge higher EE region of all the MPcs herein considered includes electronic states generated by metal-to-ligand-charge-transfer transitions involving the lowest-lying π* orbital (7eg) of the phthalocyaninato ligand.
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Affiliation(s)
- Silvia Carlotto
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131 Padova, Italy; (M.S.); (F.S.)
- Istituto di Chimica della Materia Condensata e di Tecnologie per l’Energia (ICMATE-CNR), via F. Marzolo 1, 35131 Padova, Italy;
- Correspondence: (S.C.); (M.C.)
| | - Mauro Sambi
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131 Padova, Italy; (M.S.); (F.S.)
| | - Francesco Sedona
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131 Padova, Italy; (M.S.); (F.S.)
| | - Andrea Vittadini
- Istituto di Chimica della Materia Condensata e di Tecnologie per l’Energia (ICMATE-CNR), via F. Marzolo 1, 35131 Padova, Italy;
| | - Maurizio Casarin
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, via F. Marzolo 1, 35131 Padova, Italy; (M.S.); (F.S.)
- Istituto di Chimica della Materia Condensata e di Tecnologie per l’Energia (ICMATE-CNR), via F. Marzolo 1, 35131 Padova, Italy;
- Correspondence: (S.C.); (M.C.)
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18
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Wang Y, Wang Z, Yang J, Li X. Precise Spin Manipulation of Single Molecule Positioning on Graphene by Coordination Chemistry. J Phys Chem Lett 2020; 11:9819-9827. [PMID: 33156628 DOI: 10.1021/acs.jpclett.0c03026] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Precise spin manipulation of single molecules is crucial for future molecular spintronics. However, it has been a formidable challenge due to the complexities of the strong molecule-substrate coupling as well as the response of the molecule to external stimulus. Here we demonstrate by density functional theory calculations that precise spin manipulation can be achieved by extra CO and NO molecules coordination to transition metal phthalocyanine (TMPc) (TM = Co, Fe, Mn) molecules deposited on metal-supported graphene; the spins of TMPc molecules are switched from S to S - 1/2 (|S - 1|) after NO (CO) coordination. With the aid of a combination of molecular orbitals (MO) theory and recently developed principal interacting spin-orbital (PISO) analysis, the impacts of NO and CO coordinations on both adsorption configuration and spin polarization of TMPc are well elucidated. We reveal the different coordination geometries that CO always coordinates axially to the TM center with a linear geometry, while NO prefers a bent geometry, which can be attributed to the competition between the σ- and π-type interactions according to the PISO analysis. Particularly, the NO-MnPc complex adopts a bent geometry deviating from the prediction by the existing Enemark-Feltham formalism. In addition, MO analysis suggests that during the CO coordination, the simultaneous existence of σ-donation and π-back-donation promotes electrons flowing from the dz2 to partially occupied dπ (dxz and dxz) orbitals with subsequent reordering of the TM d-orbitals, resulting in the spin transition of S → |S - 1|. In comparison, given that NO is regarded as NO- when it adopts a bent geometry coordinating to the TM center, the complete (CoPc) or partial (FePc and MnPc) quenching of the molecular spins caused by NO coordination is attributed to the electron transfer from TM to NO. These theoretical findings provide important insights into relevant experiments and offer an effective design strategy to realize underlying single-molecular spintronics devices integrated with two-dimensional materials.
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Affiliation(s)
- Yu Wang
- Institute for Advanced Study, Shenzhen University, Shenzhen 518060, China
| | - Zheng Wang
- Institute for Advanced Study, Shenzhen University, Shenzhen 518060, China
| | - Jinlong Yang
- Hefei National Laboratory for Physical Sciences at the Microscale and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei 230026, China
| | - Xiaoguang Li
- Institute for Advanced Study, Shenzhen University, Shenzhen 518060, China
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19
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Synthesis, anti-cholinesterease, α-glucosidase inhibitory, antioxidant and DNA nuclease properties of non-peripheral triclosan substituted metal-free, copper(II), and nickel(II) phthalocyanines. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121423] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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20
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Chen K, Liu K, An P, Li H, Lin Y, Hu J, Jia C, Fu J, Li H, Liu H, Lin Z, Li W, Li J, Lu YR, Chan TS, Zhang N, Liu M. Iron phthalocyanine with coordination induced electronic localization to boost oxygen reduction reaction. Nat Commun 2020; 11:4173. [PMID: 32820168 PMCID: PMC7441147 DOI: 10.1038/s41467-020-18062-y] [Citation(s) in RCA: 184] [Impact Index Per Article: 36.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2020] [Accepted: 07/29/2020] [Indexed: 01/20/2023] Open
Abstract
Iron phthalocyanine (FePc) is a promising non-precious catalyst for the oxygen reduction reaction (ORR). Unfortunately, FePc with plane-symmetric FeN4 site usually exhibits an unsatisfactory ORR activity due to its poor O2 adsorption and activation. Here, we report an axial Fe-O coordination induced electronic localization strategy to improve its O2 adsorption, activation and thus the ORR performance. Theoretical calculations indicate that the Fe-O coordination evokes the electronic localization among the axial direction of O-FeN4 sites to enhance O2 adsorption and activation. To realize this speculation, FePc is coordinated with an oxidized carbon. Synchrotron X-ray absorption and Mössbauer spectra validate Fe-O coordination between FePc and carbon. The obtained catalyst exhibits fast kinetics for O2 adsorption and activation with an ultralow Tafel slope of 27.5 mV dec-1 and a remarkable half-wave potential of 0.90 V. This work offers a new strategy to regulate catalytic sites for better performance.
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Affiliation(s)
- Kejun Chen
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Kang Liu
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Pengda An
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China.,School of Materials Science and Engineering, Central South University, Changsha, 410083, China
| | - Huangjingwei Li
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Yiyang Lin
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Junhua Hu
- School of Materials Science and Engineering, Zhengzhou University, Zhengzhou, 450002, China
| | - Chuankun Jia
- College of Materials Science and Engineering, Changsha University of Science & Technology, Changsha, 410114, China
| | - Junwei Fu
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Hongmei Li
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China
| | - Hui Liu
- School of Metallurgy and Environment, Central South University, Changsha, 410083, China
| | - Zhang Lin
- School of Metallurgy and Environment, Central South University, Changsha, 410083, China
| | - Wenzhang Li
- School of Chemistry and Chemical Engineering, Central South University, Changsha, 410083, China
| | - Jiahang Li
- Changjun High School of Changsha, Changsha, 410002, China
| | - Ying-Rui Lu
- National Synchrotron Radiation Research Center, 300, Hsinchu, Taiwan
| | - Ting-Shan Chan
- National Synchrotron Radiation Research Center, 300, Hsinchu, Taiwan
| | - Ning Zhang
- School of Materials Science and Engineering, Central South University, Changsha, 410083, China
| | - Min Liu
- State Key Laboratory of Powder Metallurgy, School of Physical and Electronics, Central South University, Changsha, 410083, China.
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21
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22
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Pişkin M, Öztürk ÖF, Odabaş Z. Determination of photophysical, photochemical and spectroscopic properties of novel lead(II) phthalocyanines. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114480] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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23
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Witkowski N, Lüder J, Bidermane I, Farronato M, Prévot G, Bouvet M, Puglia C, Brena B. Grafting, self-organization and reactivity of double-decker rare-earth phthalocyanine. J PORPHYR PHTHALOCYA 2020. [DOI: 10.1142/s1088424619501736] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Unveiling the interplay of semiconducting organic molecules with their environment, such as inorganic materials or atmospheric gas, is the first step to designing hybrid devices with tailored optical, electronic or magnetic properties. The present article focuses on a double-decker lutetium phthalocyanine known as an intrinsic semiconducting molecule, holding a Lu ion in its center, sandwiched between two phthalocyanine rings. Carrying out experimental investigations by means of electron spectroscopies, X-ray diffraction and scanning probe microscopies together with advanced ab initio computations, allows us to unveil how this molecule interacts with weakly or highly reactive surfaces. Our studies reveal that a molecule–surface interaction is evidenced when molecules are deposited on bare silicon or on gold surfaces together with a charge transferred from the substrate to the molecule, affecting to a higher extent the lower ring of the molecule. A new packing of the molecules on gold surfaces is proposed: an eclipse configuration in which molecules are flat and parallel to the surface, even for thick films of several hundreds of nanometers. Surprisingly, a robust tolerance of the double-decker phthalocyanine toward oxygen molecules is demonstrated, leading to weak chemisorption of oxygen below 100 K.
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Affiliation(s)
- Nadine Witkowski
- Sorbonne Université, UMR CNRS 7588, Institut des Nanosciences de Paris, 4 Pl. Jussieu, F-75005 Paris, France
| | - Johann Lüder
- Department of Physics and Astronomy, Uppsala University, BOX 516, SE-75120 Uppsala, Sweden
- Department of Materials and Optoelectronic Science, National Sun Yat-Sen University, Kaohsiung 80424, Taiwan
| | - Ieva Bidermane
- Sorbonne Université, UMR CNRS 7588, Institut des Nanosciences de Paris, 4 Pl. Jussieu, F-75005 Paris, France
- Department of Physics and Astronomy, Uppsala University, BOX 516, SE-75120 Uppsala, Sweden
| | - Mattia Farronato
- Sorbonne Université, UMR CNRS 7588, Institut des Nanosciences de Paris, 4 Pl. Jussieu, F-75005 Paris, France
| | - Geoffroy Prévot
- Sorbonne Université, UMR CNRS 7588, Institut des Nanosciences de Paris, 4 Pl. Jussieu, F-75005 Paris, France
| | - Marcel Bouvet
- Institut de Chimie Moléculaire de l’Université de Bourgogne (ICMUB),CNRS UMR 6302, Université Bourgogne Franche-Comté, F-21078 Dijon, France
| | - Carla Puglia
- Department of Physics and Astronomy, Uppsala University, BOX 516, SE-75120 Uppsala, Sweden
| | - Barbara Brena
- Department of Physics and Astronomy, Uppsala University, BOX 516, SE-75120 Uppsala, Sweden
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24
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Trogadas P, Coppens MO. Nature-inspired electrocatalysts and devices for energy conversion. Chem Soc Rev 2020; 49:3107-3141. [DOI: 10.1039/c8cs00797g] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A NICE approach for the design of nature-inspired electrocatalysts and electrochemical devices for energy conversion.
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Affiliation(s)
- Panagiotis Trogadas
- EPSRC “Frontier Engineering” Centre for Nature Inspired Engineering & Department of Chemical Engineering
- University College London
- London
- UK
| | - Marc-Olivier Coppens
- EPSRC “Frontier Engineering” Centre for Nature Inspired Engineering & Department of Chemical Engineering
- University College London
- London
- UK
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25
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Chen H, Zhu H, Huang Z, Rong W, Wu K. Two-Sidedness of Surface Reaction Mediation. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2019; 31:e1902080. [PMID: 31418920 DOI: 10.1002/adma.201902080] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 06/10/2019] [Indexed: 06/10/2023]
Abstract
A heterogeneous catalytic process involves many surface elementary steps that affect the overall catalytic performance in one way or another. In general, a high-performance heterogeneous catalyst should meet the main criteria: excellent catalytic activity and high selectivity toward target products. Using surface science techniques, the two-sidedness of the surface reaction mediations can be explored, from the perspectives of the surface and the molecule manipulations. The surface manipulation refers to a reaction that is mediated by composition and structure of the substrate as well as surface species, while the molecular manipulation relates to a reaction that is mediated by the reacting molecule via the precursor selection, environmental control, or external excitation. The best catalytic system should consist of the most efficient catalyst and the best suitable reacting molecule, in addition to its economic benefit and environmental amity. Recent research progress in surface reaction mediation is outlined, and its two-sidedness is governed by the Arrhenius equation. This should shed new light on the connection between basic theory and surface reaction mediation strategies. To conclude, challenges and possible opportunities are elaborated for efficient surface reaction mediations.
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Affiliation(s)
- Haoran Chen
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Hao Zhu
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Zhichao Huang
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Wenhui Rong
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Kai Wu
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
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26
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Mukherjee M, Samanta M, Das GP, Chattopadhyay KK. Investigation of ORR Performances on Graphene/Phthalocyanine Nanocomposite in Neutral Medium. MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2019; 25:1416-1421. [PMID: 31130144 DOI: 10.1017/s1431927619000643] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The drive to replace scarce and expensive Pt-based electrocatalysts for oxygen reduction reaction (ORR) has led to the development of a group of electrocatalysts composed of transition-metal ion centers coordinated with four nitrogen groups (M-N4). Among these, metal phthalocyanines (MPcs), due to low cost of preparation, highly conjugated structure as well as high thermal and chemical stability, have received a great interest. The catalytic activity of MPcs can be improved by employing conducting supports. Here, in this report, we have solvothermally synthesized graphene-supported zinc phthalocyanine nanostructures, and their ORR kinetics and mechanism have been investigated in neutral solution (pH = 7) by using the rotating disk electrode technique. The as-synthesized nanocomposite followed a 4e- reduction pathway. The onset potential (-0.04 V versus Ag/AgCl) found in this work can be comparable with other state-of-the-art material, demonstrating good performance in neutral solution. The fascinating performance leads the nanocomposite material toward future energy applications.
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Affiliation(s)
- Moumita Mukherjee
- Department of Materials Science, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Madhupriya Samanta
- Department of Electronics & Telecommunication Engineering, Jadavpur University, Kolkata 700032, India
- School of Materials Science & Nanotechnology, Jadavpur University, Kolkata 700032, India
| | - Gour P Das
- Department of Materials Science, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Kalyan K Chattopadhyay
- School of Materials Science & Nanotechnology, Jadavpur University, Kolkata 700032, India
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27
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Gohari S, Edjlali L, Vessally E, Es'haghi M, Goodarzi M. Toward simple model for the production of lithium phthalocyanine (LiPc) nanoflake through hydrogen transfer processes. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.112549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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28
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Nguyen D, Kang G, Hersam MC, Schatz GC, Van Duyne RP. Molecular-Scale Mechanistic Investigation of Oxygen Dissociation and Adsorption on Metal Surface-Supported Cobalt Phthalocyanine. J Phys Chem Lett 2019; 10:3966-3971. [PMID: 31251623 DOI: 10.1021/acs.jpclett.9b00926] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Ultrahigh vacuum scanning tunneling microscopy and density functional theory are used to investigate adsorption of oxygen on cobalt phthalocyanine (CoPc), a promising nonprecious metal oxygen reduction catalyst, supported on Ag(111), Cu(111), and Au(111) surfaces at the molecular scale. Four distinct molecular and atomic oxygen adsorption configurations are observed for CoPc supported on Ag(111) surfaces, which are assigned as O2/CoPc/Ag(111), O/CoPc/Ag(111), CoPc/(O)2/Ag(111), and (O)2/CoPc/Ag(111). In contrast, no oxygen adsorption is observed for CoPc supported on Cu(111) and Au(111) surfaces. The results show that for Ag(111), atomic O that is predominantly catalytically produced from the dissociation of molecular O2 at metal surface step edges is responsible for the observed adsorption configurations. However, Cu(111) binds atomic O too strongly, and Au(111) does not produce atomic O. These results show the active role of the supporting metal surface in facilitating oxygen adsorption on CoPc.
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29
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Wang Y, Li X, Yang J. Electronic and magnetic properties of CoPc and FePc molecules on graphene: the substrate, defect, and hydrogen adsorption effects. Phys Chem Chem Phys 2019; 21:5424-5434. [PMID: 30793133 DOI: 10.1039/c8cp07091a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Transition metal phthalocyanines (TMPcs) are particularly appealing for spintronic processing and data storage devices due to their structural simplicity and functional flexibility. To realize effective control of the spins in TMPc-based systems, it is necessary to quantify how the structural and chemical environment of the molecule affects its spin center. Herein we perform a detailed investigation of the electronic and spintronic properties of vertically stacked heterostructures formed by CoPc or FePc adsorbed on a monolayer of graphene under the influences of the gold substrate, vacancies in graphene, and extra atomic hydrogen coordination on the TMPc. By using density functional theory (DFT), we reveal that both the TMPc molecules prefer the carbon-top position on graphene, and the existence of the Au substrate enhances the stability of the adsorption, while this enhanced adsorption will not modify the molecular magnetism, keeping it the same value as in the free standing case. Moreover, with the aid of a combination of DFT and ab initio wavefunction-based calculations, our results indicate that the magnetic anisotropy of the FePc-graphene complex can be actively tuned by the Au substrate. Our calculations also show that defects in graphene including single and double vacancies can modify the magnetism of these heterostructures. In particular, the spin state of FePc can be tuned from S = 1 to S = 2 with such defect engineering. Further spin state tunability can be achieved from a hydrogenation process, with the coordination of one extra hydrogen on the Co-top site for CoPc and the pyridinic N site for FePc, respectively, tuning their spin states from S = 1/2 to S = 0 and from S = 1 to S = 2. These findings may prove to be instrumental for rational design of future molecular spintronics devices integrated with two-dimensional materials.
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Affiliation(s)
- Yu Wang
- Institute for Advanced Study, Shenzhen University, Shenzhen 518060, China.
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30
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Hötger D, Etzkorn M, Morchutt C, Wurster B, Dreiser J, Stepanow S, Grumelli D, Gutzler R, Kern K. Stability of metallo-porphyrin networks under oxygen reduction and evolution conditions in alkaline media. Phys Chem Chem Phys 2019; 21:2587-2594. [PMID: 30657498 DOI: 10.1039/c8cp07463a] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Transition metal atoms stabilised by organic ligands or as oxides exhibit promising catalytic activity for the electrocatalytic reduction and evolution of oxygen. Built-up from earth-abundant elements, they offer affordable alternatives to precious-metal based catalysts for application in fuel cells and electrolysers. For the understanding of a catalyst's activity, insight into its structure on the atomic scale is of highest importance, yet commonly challenging to experimentally access. Here, the structural integrity of a bimetallic iron tetrapyridylporphyrin with co-adsorbed cobalt electrocatalyst on Au(111) is investigated using scanning tunneling microscopy and X-ray absorption spectroscopy. Topographic and spectroscopic characterization reveals structural changes of the molecular coordination network after oxygen reduction, and its decomposition and transformation into catalytically active Co/Fe (oxyhydr)oxide during oxygen evolution. The data establishes a structure-property relationship for the catalyst as a function of electrochemical potential and, in addition, highlights how the reaction direction of electrochemical interconversion between molecular oxygen and hydroxyl anions can have very different effects on the catalyst's structure.
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Affiliation(s)
- Diana Hötger
- Max Planck Institute for Solid State Research, 70569 Stuttgart, Germany.
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31
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Xu F, Zhang L, Ding X, Cong M, Jin Y, Chen L, Gao Y. Selective electroreduction of dinitrogen to ammonia on a molecular iron phthalocyanine/O-MWCNT catalyst under ambient conditions. Chem Commun (Camb) 2019; 55:14111-14114. [DOI: 10.1039/c9cc06574a] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Effective catalysts with sufficient activity and selectivity are essential for the nitrogen reduction reaction (NRR).
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Affiliation(s)
- Fanfan Xu
- College of Chemistry and Chemical Engineering
- Qingdao University
- Qingdao 266071
- P. R. China
| | - Linlin Zhang
- College of Chemistry and Chemical Engineering
- Qingdao University
- Qingdao 266071
- P. R. China
| | - Xin Ding
- College of Chemistry and Chemical Engineering
- Qingdao University
- Qingdao 266071
- P. R. China
- State Key Laboratory of Fine Chemicals
| | - Meiyu Cong
- College of Chemistry and Chemical Engineering
- Qingdao University
- Qingdao 266071
- P. R. China
| | - Yu Jin
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology (DUT)
- Dalian 116024
- P. R. China
| | - Lin Chen
- State Key Laboratory of Environment-friendly Energy Materials
- Southwest University of Science and Techaology
- P. R. China
| | - Yan Gao
- State Key Laboratory of Fine Chemicals
- Dalian University of Technology (DUT)
- Dalian 116024
- P. R. China
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32
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Zamborlini G, Jugovac M, Cossaro A, Verdini A, Floreano L, Lüftner D, Puschnig P, Feyer V, Schneider CM. On-surface nickel porphyrin mimics the reactive center of an enzyme cofactor. Chem Commun (Camb) 2018; 54:13423-13426. [PMID: 30427327 DOI: 10.1039/c8cc06739b] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2024]
Abstract
Metal-containing enzyme cofactors achieve their unusual reactivity by stabilizing uncommon metal oxidation states with structurally complex ligands. In particular, the specific cofactor promoting both methanogenesis and anaerobic methane oxidation is a porphyrinoid chelated to a nickel(i) atom via a multi-step biosynthetic path, where nickel reduction is achieved through extensive molecular hydrogenation. Here, we demonstrate an alternative route to porphyrin reduction by charge transfer from a selected copper substrate to commercially available 5,10,15,20-tetraphenyl-porphyrin nickel(ii). X-ray absorption measurements at the Ni L3-edge unequivocally show that NiTPP species adsorbed on Cu(100) are stabilized in the highly reactive Ni(i) oxidation state by electron transfer to the molecular orbitals. Our approach highlights how some fundamental properties of synthetically inaccessible biological cofactors may be reproduced by hybridization of simple metalloporphyrins with metal surfaces, with implications towards novel approaches to heterogenous catalysis.
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Affiliation(s)
- Giovanni Zamborlini
- Peter Grünberg Institute (PGI-6), Forschungszentrum Jülich GmbH, 52425 Jülich, Germany.
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33
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Corva M, Mohamed F, Tomsic E, Feng Z, Skala T, Comelli G, Seriani N, Peressi M, Vesselli E. Substrate- to Laterally-Driven Self-Assembly Steered by Cu Nanoclusters: The Case of FePcs on an Ultrathin Alumina Film. ACS NANO 2018; 12:10755-10763. [PMID: 30212186 DOI: 10.1021/acsnano.8b05992] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We show that, for the formation of a metallorganic monolayer, it is possible to artificially divert from substrate- to laterally-driven self-assembly mechanisms by properly tailoring the corrugation of the potential energy surface of the growth template. By exploiting the capability of an ultrathin alumina film to host metallic nanoparticle seeds, we tune the symmetry of a iron phthalocyanine (FePc) two-dimensional crystal, thus showing that it is possible to switch from trans to lateral dominating interactions in the controlled growth of an organic/inorganic heterostack. Finally, by selecting the size of the metallic clusters, we can also control the FePc-metal interaction strength.
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Affiliation(s)
- Manuel Corva
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
- Istituto Officina dei Materiali CNR-IOM , S.S. 14 km 163.5, Area Science Park , Basovizza, Trieste 34149 , Italy
| | - Fatema Mohamed
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
| | - Erika Tomsic
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
| | - Zhijing Feng
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
- Istituto Officina dei Materiali CNR-IOM , S.S. 14 km 163.5, Area Science Park , Basovizza, Trieste 34149 , Italy
| | - Tomas Skala
- Faculty of Mathematics and Physics , Charles University , V Holešovičkách 2 , Prague 8 18000 , Czech Republic
| | - Giovanni Comelli
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
- Istituto Officina dei Materiali CNR-IOM , S.S. 14 km 163.5, Area Science Park , Basovizza, Trieste 34149 , Italy
| | - Nicola Seriani
- The Abdus Salam International Centre for Theoretical Physics (ICTP) , Strada Costiera 11 , Trieste 34151 , Italy
| | - Maria Peressi
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
- Istituto Officina dei Materiali CNR-IOM , S.S. 14 km 163.5, Area Science Park , Basovizza, Trieste 34149 , Italy
| | - Erik Vesselli
- Physics Department , University of Trieste , via A. Valerio 2 , Trieste 34127 , Italy
- Istituto Officina dei Materiali CNR-IOM , S.S. 14 km 163.5, Area Science Park , Basovizza, Trieste 34149 , Italy
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34
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Verstraete L, Smart J, Hirsch BE, De Feyter S. Unidirectional supramolecular self-assembly inside nanocorrals via in situ STM nanoshaving. Phys Chem Chem Phys 2018; 20:27482-27489. [PMID: 30358776 DOI: 10.1039/c8cp05316b] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Self-assembly of an alkylated diacetylene derivative is spatially confined via in situ scanning tunneling microscopy (STM) nanoshaving inside covalently modified highly ordered pyrolytic graphite (CM-HOPG). In contrast to unconstrained self-assembly that occurs randomly along three thermodynamically equivalent surface lattice directions, spatially confined assemblies are shown to form along chosen substrate orientations. Experimental statistics suggest two mechanisms for breaking the rotational degeneracy of the surface. First, the assembly orientation is biased via lateral confinement inside nanocorrals that do not match the substrate symmetry. Second, an interaction between the assembling molecules and the STM tip during nanoshaving guides 2D crystal nucleation and growth. The results presented here open new possibilities to regulate and orient self-assembled architectures via in situ nanomechanical manipulation techniques and provide mechanistic insights into the process.
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Affiliation(s)
- Lander Verstraete
- Department of Chemistry, Division of Molecular Imaging and Photonics, KU Leuven-University of Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
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35
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Nachtigallová D, Antalík A, Lo R, Sedlák R, Manna D, Tuček J, Ugolotti J, Veis L, Legeza Ö, Pittner J, Zbořil R, Hobza P. An Isolated Molecule of Iron(II) Phthalocyanin Exhibits Quintet Ground-State: A Nexus between Theory and Experiment. Chemistry 2018; 24:13413-13417. [DOI: 10.1002/chem.201803380] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 07/31/2018] [Indexed: 01/07/2023]
Affiliation(s)
- Dana Nachtigallová
- Institute of Organic Chemistry and Biochemistry; Academy of Sciences of the Czech Republic; v.v.i., Flemingovo nám. 2 16610 Prague 6 Czech Republic
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Andrej Antalík
- J. Heyrovský Institute of Physical Chemistry; Academy of Sciences of the Czech Republic; v.v.i., Dolejškova 3 18223 Prague 8 Czech Republic
- Faculty of Mathematics and Physics; Charles University Prague; 11636 Prague Czech Republic Republic
| | - Rabindranath Lo
- Institute of Organic Chemistry and Biochemistry; Academy of Sciences of the Czech Republic; v.v.i., Flemingovo nám. 2 16610 Prague 6 Czech Republic
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Robert Sedlák
- Institute of Organic Chemistry and Biochemistry; Academy of Sciences of the Czech Republic; v.v.i., Flemingovo nám. 2 16610 Prague 6 Czech Republic
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Debashree Manna
- Institute of Organic Chemistry and Biochemistry; Academy of Sciences of the Czech Republic; v.v.i., Flemingovo nám. 2 16610 Prague 6 Czech Republic
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Jiří Tuček
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Juri Ugolotti
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Libor Veis
- J. Heyrovský Institute of Physical Chemistry; Academy of Sciences of the Czech Republic; v.v.i., Dolejškova 3 18223 Prague 8 Czech Republic
| | - Örs Legeza
- Strongly Correlated Systems “ Lendület” Research group; Wigner Research Centre for Physics; 1525 Budapest Hungary
| | - Jiří Pittner
- J. Heyrovský Institute of Physical Chemistry; Academy of Sciences of the Czech Republic; v.v.i., Dolejškova 3 18223 Prague 8 Czech Republic
| | - Radek Zbořil
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
| | - Pavel Hobza
- Institute of Organic Chemistry and Biochemistry; Academy of Sciences of the Czech Republic; v.v.i., Flemingovo nám. 2 16610 Prague 6 Czech Republic
- Regional Centre of Advanced Technologies and Materials; Department of Physical Chemistry; Faculty of Science, Palacký University in Olomouc; Šlechtitelů 27 78371 Olomouc Czech Republic
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36
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Buimaga-Iarinca L, Morari C. Translation of metal-phthalocyanines adsorbed on Au(111): from van der Waals interaction to strong electronic correlation. Sci Rep 2018; 8:12728. [PMID: 30143696 PMCID: PMC6109120 DOI: 10.1038/s41598-018-31147-5] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Accepted: 08/13/2018] [Indexed: 11/23/2022] Open
Abstract
Using first-principles calculations, we investigate the binding energy for six transition metal - phthalocyanine molecules adsorbed on Au(111). We focus on the effect of translation on molecule - surface physical properties; van der Waals interactions as well as the strong correlation in d orbitals of transition metals are taken into account in all calculations. We found that dispersion interaction and charge transfer have the dominant role in the molecule-surface interaction, while the interaction between the transition metal and gold has a rather indirect influence over the physics of the molecule-surface system. A detailed analysis of the physical properties of the adsorbates at different geometric configurations allows us to propose qualitative models to account for all values of interface dipole charge transfer and magnetic moment of metal-phthalocyanines adsorbed on Au(111).
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Affiliation(s)
- L Buimaga-Iarinca
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat, 400293, Cluj-Napoca, Romania
| | - C Morari
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat, 400293, Cluj-Napoca, Romania.
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37
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Pizarro A, Abarca G, Gutiérrez-Cerón C, Cortés-Arriagada D, Bernardi F, Berrios C, Silva JF, Rezende MC, Zagal JH, Oñate R, Ponce I. Building Pyridinium Molecular Wires as Axial Ligands for Tuning the Electrocatalytic Activity of Iron Phthalocyanines for the Oxygen Reduction Reaction. ACS Catal 2018. [DOI: 10.1021/acscatal.8b01479] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Ana Pizarro
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Gabriel Abarca
- Centro de Nanotecnología Aplicada, Facultad de Ciencias, Universidad Mayor, Chile, Camino la Pirámide 5750, Huechuraba 8580745 Santiago, Chile
| | - Cristian Gutiérrez-Cerón
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Diego Cortés-Arriagada
- Programa Institucional de Fomento a la Investigación, Desarrollo e Innovación, Universidad Tecnológica Metropolitana, Ignacio Valdivieso 2409, 8940577 San Joaquín, Santiago, Chile
| | - Fabiano Bernardi
- Institute of Physics, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves, 9500, Porto Alegre 91501-970, RS, Brazil
| | - Cristhian Berrios
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Juan F. Silva
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Marcos C. Rezende
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - José H. Zagal
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Rubén Oñate
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
| | - Ingrid Ponce
- Facultad de Química y Biología, Universidad de Santiago de Chile, Avenida Libertador Bernardo O’Higgins 3363, Casilla 40, Correo 33, Santiago 9170022, Chile
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38
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de la Torre B, Švec M, Hapala P, Redondo J, Krejčí O, Lo R, Manna D, Sarmah A, Nachtigallová D, Tuček J, Błoński P, Otyepka M, Zbořil R, Hobza P, Jelínek P. Non-covalent control of spin-state in metal-organic complex by positioning on N-doped graphene. Nat Commun 2018; 9:2831. [PMID: 30026582 PMCID: PMC6053383 DOI: 10.1038/s41467-018-05163-y] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Accepted: 06/08/2018] [Indexed: 11/09/2022] Open
Abstract
Nitrogen doping of graphene significantly affects its chemical properties, which is particularly important in molecular sensing and electrocatalysis applications. However, detailed insight into interaction between N-dopant and molecules at the atomic scale is currently lacking. Here we demonstrate control over the spin state of a single iron(II) phthalocyanine molecule by its positioning on N-doped graphene. The spin transition was driven by weak intermixing between orbitals with z-component of N-dopant (pz of N-dopant) and molecule (dxz, dyz, dz2) with subsequent reordering of the Fe d-orbitals. The transition was accompanied by an electron density redistribution within the molecule, sensed by atomic force microscopy with CO-functionalized tip. This demonstrates the unique capability of the high-resolution imaging technique to discriminate between different spin states of single molecules. Moreover, we present a method for triggering spin state transitions and tuning the electronic properties of molecules through weak non-covalent interaction with suitably functionalized graphene.
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Affiliation(s)
- Bruno de la Torre
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Martin Švec
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Prokop Hapala
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic
| | - Jesus Redondo
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic
| | - Ondřej Krejčí
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic
| | - Rabindranath Lo
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Debashree Manna
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Amrit Sarmah
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Dana Nachtigallová
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Jiří Tuček
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Piotr Błoński
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Michal Otyepka
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic
| | - Radek Zbořil
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic.
| | - Pavel Hobza
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic.
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic.
| | - Pavel Jelínek
- Institute of Physics of the Czech Academy of Sciences, Cukrovarnická 10, 16200, Prague 6, Czech Republic.
- Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacký University, Šlechtitelů 27, 78371, Olomouc, Czech Republic.
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39
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Casarin M, Carlotto S. “Pigments of Life”, Molecules Well Suited to Investigate Metal-Ligand Symmetry-Restricted Covalency. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800480] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Maurizio Casarin
- Department of Chemical Sciences; University of Padova; Via F. Marzolo 1 35131 Padova Italy
- ICMATE CNR of Padova; via F. Marzolo 1 35131 Padova Italy
| | - Silvia Carlotto
- Department of Chemical Sciences; University of Padova; Via F. Marzolo 1 35131 Padova Italy
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40
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Nguyen D, Kang G, Chiang N, Chen X, Seideman T, Hersam MC, Schatz GC, Van Duyne RP. Probing Molecular-Scale Catalytic Interactions between Oxygen and Cobalt Phthalocyanine Using Tip-Enhanced Raman Spectroscopy. J Am Chem Soc 2018; 140:5948-5954. [DOI: 10.1021/jacs.8b01154] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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41
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Carlotto S, Sambi M, Rancan M, Casarin M. Theoretical Investigation of the Electronic Properties of Three Vanadium Phthalocyaninato (Pc) Based Complexes: PcV, PcVO, and PcVI. Inorg Chem 2018; 57:1859-1869. [PMID: 29389113 DOI: 10.1021/acs.inorgchem.7b02788] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The electronic properties of three vanadium phthalocyaninato (Pc) based complexes (PcV, PcVO, and PcVI; I-III, respectively) were theoretically investigated and corresponding VL2,3-edge XAS spectra modeled. Ground state (GS) DFT outcomes indicated that II is more stable than III by 141 kcal/mol; moreover, the Ziegler transition state method allowed us to estimate the PcV-X bond dissociation energy and to quantify σ/π contributions to the V-X interaction. As such, the Nalewajski-Mrozek V-X and V-N bond multiplicity indexes (V-O/V-I = 2.48/1.22; V-N = 0.64, 0.51, and 0.58 in I-III, respectively) state that the V-X bond strength and nature affect the V-N interaction. The coordination of X to V in the I → II/I → III reactions implies the transfer of two/one electrons from I to X. In both cases, the oxidation involves only the V ion; moreover, V 3d based orbitals from which electrons are transferred were identified. Literature I/IIL2,3-edge XAS data were modeled by exploiting the DFT/ROCIS method. The same protocol was adopted to predict IIIL2,3-edge XAS spectra. Theoretical results indicated that, along the whole series, spectral features lying at the lowest excitation energies (EEs) are mostly generated by states having the same GS spin multiplicity and involve 2pV → SOMO (single occupied molecular orbital) single electronic excitations. XAS features at higher EEs include only states with the same GS spin multiplicity in I, while states with both ΔS = 0 and ΔS = +1 (S = total spin quantum number) are present in II and III with significant, in some cases prevailing, contributions from metal to ligand charge transfer (MLCT) excitations. Beyond the role played by MLCT transitions in determining XAS patterns, it is noteworthy that they involve only Pc-based empty orbitals with no participation of the X-based virtual levels.
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Affiliation(s)
- Silvia Carlotto
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova , Via Francesco Marzolo 1, 35131 Padova, Italy
| | - Mauro Sambi
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova , Via Francesco Marzolo 1, 35131 Padova, Italy
| | - Marzio Rancan
- Istituto di Chimica della Materia condensata e di Tecnologie per l'Energia, ICMATE-CNR , Via Francesco Marzolo 1, 35131 Padova, Italy
| | - Maurizio Casarin
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova , Via Francesco Marzolo 1, 35131 Padova, Italy.,Istituto di Chimica della Materia condensata e di Tecnologie per l'Energia, ICMATE-CNR , Via Francesco Marzolo 1, 35131 Padova, Italy
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42
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Zhou X, Dai J, Wu K. Steering on-surface reactions with self-assembly strategy. Phys Chem Chem Phys 2018; 19:31531-31539. [PMID: 29171852 DOI: 10.1039/c7cp06177c] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The control of assembly structures that subsequently help achieve viable functionalities has been one of the key motivations for the exploration of surface molecular assembly. In terms of its functionality and applicability, the assembly is explored as a strategy to steer on-surface reactions primarily by two methods: assembly-assisted and assembly-involved reactions. The functions of the self-assembly strategy are threefold: tweaking reaction selectivities, steering reaction pathways, and directing reaction sites. The governing principle herein is that the assembly strategy can apply a surface confinement effect that affects the energy barrier and pre-exponential factor of the Arrhenius equation for the dynamics of the target reaction. Development of such a strategy may reveal new routes to steer on-surface reactions and even single molecule properties in surface chemistry.
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Affiliation(s)
- Xiong Zhou
- BNLMS, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China.
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43
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Sedona F, Lo Cicero M, Carlotto S, Basagni A, Fakhrabadi MMS, Casarin M, Sambi M. Substrate involvement in dioxygen bond dissociation catalysed by iron phthalocyanine supported on Ag(100). Chem Commun (Camb) 2018; 54:9418-9421. [DOI: 10.1039/c8cc04362k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The first evidence is provided of the role played by the metal support in the oxygen reduction reaction catalysed by Ag(100)-adsorbed iron phthalocyanine molecules.
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Affiliation(s)
- Francesco Sedona
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Matteo Lo Cicero
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Silvia Carlotto
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Andrea Basagni
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | | | - Maurizio Casarin
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Mauro Sambi
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
- Consorzio INSTM
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44
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Sarasola A, Abadía M, Rogero C, Garcia-Lekue A. Theoretical Insights into Unexpected Molecular Core Level Shifts: Chemical and Surface Effects. J Phys Chem Lett 2017; 8:5718-5724. [PMID: 29110481 DOI: 10.1021/acs.jpclett.7b02583] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
A set of density-functional theory based tools is employed to elucidate the influence of chemical and surface-induced changes on the core level shifts of X-ray photoelectron spectroscopy experiments. The capabilities of our tools are demonstrated by analyzing the origin of an unpredicted component in the N 1s core level spectra of metal phthalocyanine molecules (in particular ZnPc) adsorbed on Cu(110). We address surface induced effects, such as splitting of the lowest unoccupied molecular orbital or local electrostatic effects, demonstrating that these cannot account for the huge core level shift measured experimentally. Our calculations also show that, when adsorbed at low temperatures, these molecules might capture hydrogen atoms from the surface, giving rise to hydrogenated molecular species and, consequently, to an extra component in the molecular core level spectra. Only upon annealing, and subsequent hydrogen release, would the molecules recover their nominal structural and electronic properties.
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Affiliation(s)
- A Sarasola
- Departamento de Física Aplicada I, UPV/EHU , Plaza Europa 1, E-20018, San Sebastián, Spain
- Donostia International Physics Center (DIPC) , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
| | - M Abadía
- Centro de Física de Materiales (CSIC-UPV/EHU), Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
| | - C Rogero
- Donostia International Physics Center (DIPC) , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
- Centro de Física de Materiales (CSIC-UPV/EHU), Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
| | - A Garcia-Lekue
- Donostia International Physics Center (DIPC) , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
- IKERBASQUE, Basque Foundation for Science, E-48011, Bilbao, Spain
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45
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Lo Cicero M, Della Pia A, Riello M, Colazzo L, Sedona F, Betti MG, Sambi M, De Vita A, Mariani C. A long-range ordered array of copper tetrameric units embedded in an on-surface metal organic framework. J Chem Phys 2017; 147:214706. [DOI: 10.1063/1.5004082] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Matteo Lo Cicero
- Dipartimento di Chimica, Università di Roma “La Sapienza,” I-00185 Roma, Italy
| | - Ada Della Pia
- Dipartimento di Fisica, Università di Roma “La Sapienza,” I-00185 Roma, Italy
| | - Massimo Riello
- Physics Department, King’s College, Strand, London WC2R 2LS, United Kingdom
| | - Luciano Colazzo
- Dipartimento di Scienze Chimiche, Università di Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Francesco Sedona
- Dipartimento di Scienze Chimiche, Università di Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Maria Grazia Betti
- Dipartimento di Fisica, Università di Roma “La Sapienza,” I-00185 Roma, Italy
| | - Mauro Sambi
- Dipartimento di Scienze Chimiche and INSTM, Università di Padova, Via Marzolo 1, I-35131 Padova, Italy
| | - Alessandro De Vita
- Physics Department, King’s College, Strand, London WC2R 2LS, United Kingdom
- Department of Engineering and Architecture, University of Trieste, I-34127 Trieste, Italy
| | - Carlo Mariani
- Dipartimento di Fisica, Università di Roma “La Sapienza,” I-00185 Roma, Italy
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46
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Li Z, Zhao Y, Mu K, Shan H, Guo Y, Wu J, Su Y, Wu Q, Sun Z, Zhao A, Cui X, Wu C, Xie Y. Molecule-Confined Engineering toward Superconductivity and Ferromagnetism in Two-Dimensional Superlattice. J Am Chem Soc 2017; 139:16398-16404. [DOI: 10.1021/jacs.7b10071] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zejun Li
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Yingcheng Zhao
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Kejun Mu
- National
Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, People’s Republic of China
| | - Huan Shan
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Yuqiao Guo
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Jiajing Wu
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Yueqi Su
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Qiran Wu
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Zhe Sun
- National
Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, People’s Republic of China
- Collaborative Innovation Center of Advanced Microstructures, Nanjing 210093, People’s Republic of China
| | - Aidi Zhao
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Xuefeng Cui
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Changzheng Wu
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
| | - Yi Xie
- Hefei
National Laboratory for Physical Sciences at the Microscale, CAS Center
for Excellence in Nanoscience, and CAS Key Laboratory of Mechanical
Behavior and Design of Materials, University of Science and Technology of China, Hefei, Anhui 230026, People’s Republic of China
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47
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Gu X, Bi S, Guo L, Zhao Y, Li T, Liu M, Chen P, Wu Y. Facile Fabrication of Ordered Component-Tunable Heterobimetallic Self-Assembly Nanosheet for Catalyzing "Click" Reaction. ACS OMEGA 2017; 2:5415-5433. [PMID: 31457810 PMCID: PMC6644525 DOI: 10.1021/acsomega.7b00364] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/28/2017] [Accepted: 06/19/2017] [Indexed: 06/10/2023]
Abstract
How to maximize the number of desirable active sites on the surface of the catalyst and minimize the number of sites promoting undesirable side reactions is currently an important research topic. In this study, a new way based on the synergism to achieve the successful fabrication of an ordered heterobimetallic self-assembled monolayer (denoted as BMSAM) with a controlled composition and an excellent orientation of metals in the monolayer was developed. BMSAM consisting of phenanthroline and Schiff-base groups was prepared, and its novel heterobimetallic (Cu and Pd) self-assembled monolayer anchored in silicon (denoted as Si-Fmp-Cu-Pd BMSAM) with a controlled composition and a fixed position was fabricated and characterized by UV, cyclic voltammetry, Raman, X-ray photoelectron spectroscopy (XPS), scanning electron microscopy (SEM), X-ray diffraction (XRD), inductively coupled plasma atomic emission spectroscopy (ICP-AES), and water-drop contact angle (WDCA) analyses. The effects of Si-Fmp-Cu-Pd BMSAM on its catalytic properties were also systematically investigated using "click" reaction as a template by WDCA, XPS, SEM, XRD, ICP-AES and in situ Fourier transform infrared analyses in a heterogeneous system. The results showed that the excellent catalytic characteristic could be attributed to the partial (ordered or proper distance) isolation of active sites displaying high densities of specific atomic ensembles. The catalytic reaction mechanism of the click reaction interpreted that the catalytic process mainly occurred on the surface of the monolayer, internal active site (Pd) and rationalized that the Cu(I) species and Pd(0) reduced from the Cu(II) and Pd(II) catalyst were active species, which had a proper distance between two different metals. The cuprate-triazole intermediate and the palladium intermediate, whose production is the key step, should lie in a proper position between the copper and active palladium sites, with which the reaction rate of transmetalation would be improved to increase the amount of the undesired Sonogashira coupling product.
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Affiliation(s)
- Xiang Gu
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
| | - Sa Bi
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
| | - Linna Guo
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
| | - Yaqing Zhao
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
| | - Tiesheng Li
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
| | - Minghua Liu
- Beijing
National Laboratory for Molecular Science, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun North First Street
2, Beijing 100190, P. R. China
| | - Penglei Chen
- Beijing
National Laboratory for Molecular Science, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun North First Street
2, Beijing 100190, P. R. China
| | - Yangjie Wu
- College
of Chemistry and Molecular Engineering, The Key Lab of Chemical Biology
and Organic Chemistry of Henan Province, and The Key Lab of Nano-information
Materials of Zhengzhou, Zhengzhou University, Kexuedadao 100, Zhengzhou 450001, P. R.
China
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48
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Cirera B, Trukhina O, Björk J, Bottari G, Rodríguez-Fernández J, Martin-Jimenez A, Islyaikin MK, Otero R, Gallego JM, Miranda R, Torres T, Ecija D. Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. J Am Chem Soc 2017; 139:14129-14136. [DOI: 10.1021/jacs.7b06406] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Olga Trukhina
- Department
of Organic Chemistry, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Jonas Björk
- Department
of Physics, Chemistry and Biology, IFM, Linköping University, 58183 Linköping, Sweden
| | - Giovanni Bottari
- IMDEA Nanoscience, 28049 Madrid, Spain
- Department
of Organic Chemistry, Universidad Autónoma de Madrid, 28049 Madrid, Spain
- Institute
for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | | | | | - Mikhail K. Islyaikin
- IRLoN,
Research
Institute of Macroheterocycles, Ivanovo State University of Chemistry and Technology, 153000 Ivanovo, Russia
| | - Roberto Otero
- IMDEA Nanoscience, 28049 Madrid, Spain
- Department
of Condensed Matter Physics, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - José M. Gallego
- Instituto
de Ciencia de Materiales de Madrid, CSIC, 28049 Madrid, Spain
| | - Rodolfo Miranda
- IMDEA Nanoscience, 28049 Madrid, Spain
- Department
of Condensed Matter Physics, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Tomás Torres
- IMDEA Nanoscience, 28049 Madrid, Spain
- Department
of Organic Chemistry, Universidad Autónoma de Madrid, 28049 Madrid, Spain
- Institute
for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid, 28049 Madrid, Spain
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49
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Zhou X, Wang C, Zhang Y, Cheng F, He Y, Shen Q, Shang J, Shao X, Ji W, Chen W, Xu G, Wu K. Steering Surface Reaction Dynamics with a Self-Assembly Strategy: Ullmann Coupling on Metal Surfaces. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201705018] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Xiong Zhou
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Chenguang Wang
- Department of Physics; Renmin University of China; Beijing 100872 China
| | - Yajie Zhang
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Fang Cheng
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Yang He
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Qian Shen
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Jian Shang
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Xiang Shao
- Department of Chemical Physics; School of Chemistry and Materials Science; University of Science and Technology of China; Hefei 230026 China
| | - Wei Ji
- Department of Physics; Renmin University of China; Beijing 100872 China
| | - Wei Chen
- Department of Chemistry; National University of Singapore; Singapore 117543 Singapore
| | - Guoqin Xu
- Department of Chemistry; National University of Singapore; Singapore 117543 Singapore
| | - Kai Wu
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
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50
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Zhou X, Wang C, Zhang Y, Cheng F, He Y, Shen Q, Shang J, Shao X, Ji W, Chen W, Xu G, Wu K. Steering Surface Reaction Dynamics with a Self-Assembly Strategy: Ullmann Coupling on Metal Surfaces. Angew Chem Int Ed Engl 2017; 56:12852-12856. [DOI: 10.1002/anie.201705018] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2017] [Revised: 07/05/2017] [Indexed: 11/07/2022]
Affiliation(s)
- Xiong Zhou
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Chenguang Wang
- Department of Physics; Renmin University of China; Beijing 100872 China
| | - Yajie Zhang
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Fang Cheng
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Yang He
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Qian Shen
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Jian Shang
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
| | - Xiang Shao
- Department of Chemical Physics; School of Chemistry and Materials Science; University of Science and Technology of China; Hefei 230026 China
| | - Wei Ji
- Department of Physics; Renmin University of China; Beijing 100872 China
| | - Wei Chen
- Department of Chemistry; National University of Singapore; Singapore 117543 Singapore
| | - Guoqin Xu
- Department of Chemistry; National University of Singapore; Singapore 117543 Singapore
| | - Kai Wu
- BNLMS; College of Chemistry and Molecular Engineering; Peking University; Beijing 100871 China
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