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For: Minsky A, Shimoni E, Frenkiel-Krispin D. Stress, order and survival. Nat Rev Mol Cell Biol 2002;3:50-60. [PMID: 11823798 DOI: 10.1038/nrm700] [Citation(s) in RCA: 91] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Number Cited by Other Article(s)
1
Norris V. Hypothesis: bacteria live on the edge of phase transitions with a cell cycle regulated by a water-clock. Theory Biosci 2024;143:253-277. [PMID: 39505803 DOI: 10.1007/s12064-024-00427-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Accepted: 10/15/2024] [Indexed: 11/08/2024]
2
Park SM, Yoon DK. Evaporation-induced self-assembly of liquid crystal biopolymers. MATERIALS HORIZONS 2024;11:1843-1866. [PMID: 38375871 DOI: 10.1039/d3mh01585h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/21/2024]
3
Kosmachevskaya OV, Novikova NN, Yakunin SN, Topunov AF. Formation of Supplementary Metal-Binding Centers in Proteins under Stress Conditions. BIOCHEMISTRY. BIOKHIMIIA 2024;89:S180-S204. [PMID: 38621750 DOI: 10.1134/s0006297924140104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 09/21/2023] [Accepted: 10/29/2023] [Indexed: 04/17/2024]
4
Romero-Romero ML, Garcia-Seisdedos H. Agglomeration: when folded proteins clump together. Biophys Rev 2023;15:1987-2003. [PMID: 38192350 PMCID: PMC10771401 DOI: 10.1007/s12551-023-01172-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 11/25/2023] [Indexed: 01/10/2024]  Open
5
Krupyanskii YF. Determination of DNA architecture of bacteria under various types of stress, methodological approaches, problems, and solutions. Biophys Rev 2023;15:1035-1051. [PMID: 37974993 PMCID: PMC10643406 DOI: 10.1007/s12551-023-01122-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 08/23/2023] [Indexed: 11/19/2023]  Open
6
Loiko N, Tereshkina K, Kovalenko V, Moiseenko A, Tereshkin E, Sokolova OS, Krupyanskii Y. DNA-Binding Protein Dps Protects Escherichia coli Cells against Multiple Stresses during Desiccation. BIOLOGY 2023;12:853. [PMID: 37372138 DOI: 10.3390/biology12060853] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Revised: 06/06/2023] [Accepted: 06/12/2023] [Indexed: 06/29/2023]
7
Tereshkin EV, Loiko NG, Tereshkina KB, Kovalenko VV, Krupyanskii YF. Possible Mechanisms of 4-Hexylresorcinol Influence on DNA and DNA–Dps Nanocrystals Affecting Stress Sustainability of Escherichia coli. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2022. [DOI: 10.1134/s1990793122040285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
8
Krupyanskii YF, Kovalenko VV, Loiko NG, Generalova AA, Moiseenko AV, Tereshkin EV, Sokolova OS, Tereshkina KB, El’-Registan GI, Popov AN. Architecture of Condensed DNA in the Nucleoid of Escherichia coli Bacterium. Biophysics (Nagoya-shi) 2022. [DOI: 10.1134/s0006350922040133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]  Open
9
Houston JE, Fruhner L, de la Cotte A, Rojo González J, Petrunin AV, Gasser U, Schweins R, Allgaier J, Richtering W, Fernandez-Nieves A, Scotti A. Resolving the different bulk moduli within individual soft nanogels using small-angle neutron scattering. SCIENCE ADVANCES 2022;8:eabn6129. [PMID: 35776796 PMCID: PMC10883365 DOI: 10.1126/sciadv.abn6129] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
10
Dps Is a Universally Conserved Dual-Action DNA-Binding and Ferritin Protein. J Bacteriol 2022;204:e0003622. [PMID: 35380871 DOI: 10.1128/jb.00036-22] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
11
Small Prokaryotic DNA-Binding Proteins Protect Genome Integrity throughout the Life Cycle. Int J Mol Sci 2022;23:ijms23074008. [PMID: 35409369 PMCID: PMC8999374 DOI: 10.3390/ijms23074008] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 03/27/2022] [Accepted: 04/01/2022] [Indexed: 12/17/2022]  Open
12
Taketomi Y, Yamaguchi Y, Sakurai S, Tanaka M. Evaluation of DNA-mediated electron transfer using a hole-trapping nucleobase under crowded conditions. Org Biomol Chem 2022;20:2043-2047. [PMID: 35005766 DOI: 10.1039/d1ob01669e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
13
Suzina NE, Sorokin VV, Polivtseva VN, Klyueva VV, Emelyanova EV, Solyanikova IP. From Rest to Growth: Life Collisions of Gordonia polyisoprenivorans 135. Microorganisms 2022;10:465. [PMID: 35208919 PMCID: PMC8879720 DOI: 10.3390/microorganisms10020465] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 01/15/2022] [Accepted: 01/20/2022] [Indexed: 02/04/2023]  Open
14
Tereshkin EV, Loiko NG, Tereshkina KB, Krupyanskii YF. Migration of 4-Hexylresorcinol Through Escherichia coli Cell Membranes. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2022. [DOI: 10.1134/s1990793121060099] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
15
Moiseenko A, Loiko N, Sokolova OS, Krupyanskii YF. Application of Special Electron Microscopy Techniques to the Study of DNA - Protein Complexes in E. coli Cells. Methods Mol Biol 2022;2516:143-156. [PMID: 35922626 DOI: 10.1007/978-1-0716-2413-5_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
16
Nishikawa H, Araoka F. A New Class of Chiral Nematic Phase with Helical Polar Order. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2021;33:e2101305. [PMID: 34278630 DOI: 10.1002/adma.202101305] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Revised: 04/25/2021] [Indexed: 06/13/2023]
17
Bergkessel M. Bacterial transcription during growth arrest. Transcription 2021;12:232-249. [PMID: 34486930 PMCID: PMC8632087 DOI: 10.1080/21541264.2021.1968761] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 08/03/2021] [Accepted: 08/11/2021] [Indexed: 11/12/2022]  Open
18
Zaveri A, Bose A, Sharma S, Rajendran A, Biswas P, Shenoy AR, Visweswariah SS. Mycobacterial STAND adenylyl cyclases: The HTH domain binds DNA to form biocrystallized nucleoids. Biophys J 2021;120:1231-1246. [PMID: 33217386 PMCID: PMC8059089 DOI: 10.1016/j.bpj.2020.11.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 11/03/2020] [Accepted: 11/10/2020] [Indexed: 01/13/2023]  Open
19
Dubrovin EV, Dadinova LA, Petoukhov MV, Soshinskaya EY, Mozhaev AA, Klinov DV, Schäffer TE, Shtykova EV, Batishchev OV. Spatial organization of Dps and DNA-Dps complexes. J Mol Biol 2021;433:166930. [PMID: 33713674 DOI: 10.1016/j.jmb.2021.166930] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Revised: 02/24/2021] [Accepted: 03/05/2021] [Indexed: 02/04/2023]
20
Krupyanskii YF. Architecture of Nucleoid in the Dormant Cells of Escherichia coli. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2021. [DOI: 10.1134/s199079312102007x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
21
Pathological ATX3 Expression Induces Cell Perturbations in E. coli as Revealed by Biochemical and Biophysical Investigations. Int J Mol Sci 2021;22:ijms22020943. [PMID: 33477953 PMCID: PMC7835732 DOI: 10.3390/ijms22020943] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 01/15/2021] [Accepted: 01/16/2021] [Indexed: 02/06/2023]  Open
22
Garcia-Seisdedos H, Heidenreich M, Levy ED. Not Going with the Flow: How Cells Adapt Internal Physics. Cell 2020;183:1462-1463. [PMID: 33306951 DOI: 10.1016/j.cell.2020.11.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
23
Maturation of Pseudo-Nucleus Compartment in P. aeruginosa, Infected with Giant phiKZ Phage. Viruses 2020;12:v12101197. [PMID: 33096802 PMCID: PMC7589130 DOI: 10.3390/v12101197] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 10/19/2020] [Accepted: 10/19/2020] [Indexed: 12/25/2022]  Open
24
Morphological peculiarities of the DNA-protein complexes in starved Escherichia coli cells. PLoS One 2020;15:e0231562. [PMID: 33006967 PMCID: PMC7531825 DOI: 10.1371/journal.pone.0231562] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Accepted: 09/15/2020] [Indexed: 11/28/2022]  Open
25
Sakurai S, Jo K, Kinoshita H, Esumi M, Tanaka M. Guanine damage by singlet oxygen from SYBR Green I in liquid crystalline DNA. Org Biomol Chem 2020;18:7183-7187. [PMID: 32897281 DOI: 10.1039/d0ob01723j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
26
Chuev MA, Prutskov GV, Novikova NN, Pashaev EM, Konovalov OV, Stepina ND, Rogachev AV, Yakunin SN. Theoretical Approach to Analysis of X-Ray Grazing-Incidence Diffraction from 2D Crystals. CRYSTALLOGR REP+ 2020. [DOI: 10.1134/s1063774520050041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
27
Liang Q, Jiang Y, Chen JZY. Orientationally ordered states of a wormlike chain in spherical confinement. Phys Rev E 2019;100:032502. [PMID: 31640076 DOI: 10.1103/physreve.100.032502] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Indexed: 06/10/2023]
28
Tereshkin EV, Tereshkina KB, Kovalenko VV, Loiko NG, Krupyanskii YF. Structure of DPS Protein Complexes with DNA. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2019. [DOI: 10.1134/s199079311905021x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
29
Projection structures reveal the position of the DNA within DNA-Dps Co-crystals. Biochem Biophys Res Commun 2019;517:463-469. [DOI: 10.1016/j.bbrc.2019.07.103] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Accepted: 07/26/2019] [Indexed: 01/30/2023]
30
Garcia‐Seisdedos H, Villegas JA, Levy ED. Infinite Ansammlungen gefalteter Proteine im Kontext von Evolution, Krankheiten und Proteinentwicklung. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201806092] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
31
Garcia‐Seisdedos H, Villegas JA, Levy ED. Infinite Assembly of Folded Proteins in Evolution, Disease, and Engineering. Angew Chem Int Ed Engl 2019;58:5514-5531. [PMID: 30133878 PMCID: PMC6471489 DOI: 10.1002/anie.201806092] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Revised: 08/06/2018] [Indexed: 12/14/2022]
32
Tereshkin E, Tereshkina K, Loiko N, Chulichkov A, Kovalenko V, Krupyanskii Y. Interaction of deoxyribonucleic acid with deoxyribonucleic acid-binding protein from starved cells: cluster formation and crystal growing as a model of initial stages of nucleoid biocrystallization. J Biomol Struct Dyn 2018;37:2600-2607. [PMID: 30033848 DOI: 10.1080/07391102.2018.1492458] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
33
Krupyanskii YF, Loiko NG, Sinitsyn DO, Tereshkina KB, Tereshkin EV, Frolov IA, Chulichkov AL, Bokareva DA, Mysyakina IS, Nikolaev YA, El’-Registan GI, Popov VO, Sokolova OS, Shaitan KV, Popov AN. Biocrystallization in Bacterial and Fungal Cells and Spores. CRYSTALLOGR REP+ 2018. [DOI: 10.1134/s1063774518040144] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
34
Meder F, Thomas SS, Bollhorst T, Dawson KA. Ordered Surface Structuring of Spherical Colloids with Binary Nanoparticle Superlattices. NANO LETTERS 2018;18:2511-2518. [PMID: 29579388 DOI: 10.1021/acs.nanolett.8b00173] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
35
Shurshina AS, Galina AR, Chernova VV, Kuzina LG, Kulish EI. Supramolecular Conformational Effect in Complexations of Pectin and Chitosan Polysaccharides with Some Cephalosporin and Aminoglycoside Antibiotics. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2018. [DOI: 10.1134/s1990793118010256] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
36
Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome. mSystems 2018;3:mSystems00070-17. [PMID: 29404422 PMCID: PMC5781258 DOI: 10.1128/msystems.00070-17] [Citation(s) in RCA: 56] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2017] [Accepted: 12/20/2017] [Indexed: 12/24/2022]  Open
37
Loiko NG, Suzina NE, Soina VS, Smirnova TA, Zubasheva MV, Azizbekyan RR, Sinitsyn DO, Tereshkina KB, Nikolaev YA, Krupyanskii YF, El’-Registan GI. Biocrystalline structures in the nucleoids of the stationary and dormant prokaryotic cells. Microbiology (Reading) 2017. [DOI: 10.1134/s002626171706011x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
38
Sinitsyn DO, Loiko NG, Gularyan SK, Stepanov AS, Tereshkina KB, Chulichkov AL, Nikolaev AA, El-Registan GI, Popov VO, Sokolova OS, Shaitan KV, Popov AN, Krupyanskii YF. Biocrystallization of bacterial nucleoid under stress. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2017. [DOI: 10.1134/s1990793117050128] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
39
Mitov M. Cholesteric liquid crystals in living matter. SOFT MATTER 2017;13:4176-4209. [PMID: 28589190 DOI: 10.1039/c7sm00384f] [Citation(s) in RCA: 153] [Impact Index Per Article: 21.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
40
Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A 2017;114:E2440-E2449. [PMID: 28265086 DOI: 10.1073/pnas.1615575114] [Citation(s) in RCA: 86] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
41
Hysteresis in DNA compaction by Dps is described by an Ising model. Proc Natl Acad Sci U S A 2016;113:4982-7. [PMID: 27091987 DOI: 10.1073/pnas.1521241113] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]  Open
42
Dittmann C, Han HM, Grabenbauer M, Laue M. Dormant Bacillus spores protect their DNA in crystalline nucleoids against environmental stress. J Struct Biol 2015;191:156-64. [DOI: 10.1016/j.jsb.2015.06.019] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2014] [Revised: 06/10/2015] [Accepted: 06/18/2015] [Indexed: 12/23/2022]
43
Charuvi D, Nevo R, Shimoni E, Naveh L, Zia A, Adam Z, Farrant JM, Kirchhoff H, Reich Z. Photoprotection conferred by changes in photosynthetic protein levels and organization during dehydration of a homoiochlorophyllous resurrection plant. PLANT PHYSIOLOGY 2015;167:1554-65. [PMID: 25713340 PMCID: PMC4378169 DOI: 10.1104/pp.114.255794] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2014] [Accepted: 02/20/2015] [Indexed: 05/18/2023]
44
Sun S, Liu M, Dong F, Fan S, Yao Y. A histone-like protein induces plasmid DNA to form liquid crystals in vitro and gene compaction in vivo. Int J Mol Sci 2013;14:23842-57. [PMID: 24322443 PMCID: PMC3876081 DOI: 10.3390/ijms141223842] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2013] [Revised: 11/17/2013] [Accepted: 11/21/2013] [Indexed: 12/15/2022]  Open
45
Jin DJ, Cagliero C, Zhou YN. Role of RNA polymerase and transcription in the organization of the bacterial nucleoid. Chem Rev 2013;113:8662-82. [PMID: 23941620 PMCID: PMC3830623 DOI: 10.1021/cr4001429] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
46
Shechter N, Zaltzman L, Weiner A, Brumfeld V, Shimoni E, Fridmann-Sirkis Y, Minsky A. Stress-induced condensation of bacterial genomes results in re-pairing of sister chromosomes: implications for double strand DNA break repair. J Biol Chem 2013;288:25659-25667. [PMID: 23884460 DOI: 10.1074/jbc.m113.473025] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
47
Norris V, Nana GG, Audinot JN. New approaches to the problem of generating coherent, reproducible phenotypes. Theory Biosci 2013;133:47-61. [PMID: 23794321 DOI: 10.1007/s12064-013-0185-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2013] [Accepted: 06/03/2013] [Indexed: 12/01/2022]
48
Randomness and multilevel interactions in biology. Theory Biosci 2013;132:139-58. [PMID: 23637008 DOI: 10.1007/s12064-013-0179-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2012] [Accepted: 02/11/2013] [Indexed: 10/26/2022]
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Cagliero C, Jin DJ. Dissociation and re-association of RNA polymerase with DNA during osmotic stress response in Escherichia coli. Nucleic Acids Res 2013;41:315-26. [PMID: 23093594 PMCID: PMC3592413 DOI: 10.1093/nar/gks988] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2012] [Revised: 09/26/2012] [Accepted: 09/27/2012] [Indexed: 11/12/2022]  Open
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Kumari S, Swaminathan A, Chatterjee S, Senapati P, Boopathi R, Kundu TK. Chromatin organization, epigenetics and differentiation: an evolutionary perspective. Subcell Biochem 2013;61:3-35. [PMID: 23150244 DOI: 10.1007/978-94-007-4525-4_1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
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