Mantle data imply a decline of oxidizable volcanic gases could have triggered the Great Oxidation

The Nature of the Spark Is a Pivotal Element in the Design of a Miller-Urey Experiment

Miller and Urey applied electric sparks to a reducive mixture of CH4, NH3, and water to obtain a complex organic mixture including biomolecules. In this study, we examined the impact of temperature, initial pressure, ammonia concentration, and the spark generator on the chemical profile of a Miller-Urey-type prebiotic broth. We analyzed the broth composition using Gas Chromatography combined with Mass Spectroscopy (GC/MS). The results point towards strong compositional changes with the nature of the spark. Ammonia exhibited catalytic properties even with non-nitrogen-containing compounds. A more elevated temperature led to a higher variety of substances. We conclude that to reproduce such a broth as well as possible, all the studied parameters need to be tightly controlled, the most difficult and important being spark generation.

A New Ecological and Evolutionary Perspective on the Emergence of Oxygenic Photosynthesis

In this hypothesis article, we propose that the timing of the evolution of oxygenic photosynthesis and the diversification of cyanobacteria is firmly tied to the geological evolution of Earth in the Mesoarchean to Neoarchean. Specifically, the diversification of species capable of oxygenic photosynthesis is tied to the growth of subaerial (above sea-level/terrestrial) continental crust, which provided niches for their diversification. Moreover, we suggest that some formerly aerobic bacterial lineages evolved to become anoxygenic photosynthetic as a result of changes in selection following the reintroduction of ferruginous conditions in the oceans at 1.88 GYa. Both conclusions are fully compatible with phylogenetic evidence. The hypothesis carries with it a predictive component-at least for terrestrial organisms-that the development and expansion of photosynthesis species was dependent on the geological evolution of Earth.

Reconstructing Earth's atmospheric oxygenation history using machine learning

Reconstructing historical atmospheric oxygen (O₂) levels at finer temporal resolution is a top priority for exploring the evolution of life on Earth. This goal, however, is challenged by gaps in traditionally employed sediment-hosted geochemical proxy data. Here, we propose an independent strategy-machine learning with global mafic igneous geochemistry big data to explore atmospheric oxygenation over the last 4.0 billion years. We observe an overall two-step rise of atmospheric O₂ similar to the published curves derived from independent sediment-hosted paleo-oxybarometers but with a more detailed fabric of O₂ fluctuations superimposed. These additional, shorter-term fluctuations are also consistent with previous but less well-established suggestions of O₂ variability. We conclude from this agreement that Earth's oxygenated atmosphere may therefore be at least partly a natural consequence of mantle cooling and specifically that evolving mantle melts collectively have helped modulate the balance of early O₂ sources and sinks.

Rapid timescale for an oxic transition during the Great Oxidation Event and the instability of low atmospheric O2

Understanding the rise of atmospheric oxygen on Earth is important for assessing precursors to complex life and for evaluating potential future detections of oxygen on exoplanets as signs of extraterrestrial biospheres. However, it is unclear whether Earth’s initial rise of O₂ was monotonic or oscillatory, and geologic evidence poorly constrains O₂ afterward, during the mid-Proterozoic (1.8 billion to 0.8 billion years ago). Here, we used a time-dependent photochemical model to simulate oxygen’s rise and the stability of subsequent O₂ levels to perturbations in supply and loss. Results show that large oxygen fluctuations are possible during the initial rise of O₂ and that Mesoproterozoic O₂ had to exceed 0.01% volume concentration for atmospheric stability.

The Great Oxidation Event (GOE), arguably the most important event to occur on Earth since the origin of life, marks the time when an oxygen-rich atmosphere first appeared. However, it is not known whether the change was abrupt and permanent or fitful and drawn out over tens or hundreds of millions of years. Here, we developed a one-dimensional time-dependent photochemical model to resolve time-dependent behavior of the chemically unstable transitional atmosphere as it responded to changes in biogenic forcing. When forced with step-wise changes in biogenic fluxes, transitions between anoxic and oxic atmospheres take between only 10² and 10⁵ y. Results also suggest that O₂ between ~10−8 and ~10−4 mixing ratio is unstable to plausible atmospheric perturbations. For example, when atmospheres with these O₂ concentrations experience fractional variations in the surface CH₄ flux comparable to those caused by modern Milankovich cycling, oxygen fluctuates between anoxic (~10−8) and oxic (~10−4) mixing ratios. Overall, our simulations are consistent with possible geologic evidence of unstable atmospheric O₂, after initial oxygenation, which could occasionally collapse from changes in biospheric or volcanic fluxes. Additionally, modeling favors mid-Proterozoic O₂ exceeding 10−4 to 10−3 mixing ratio; otherwise, O₂ would periodically fall below 10−7 mixing ratio, which would be inconsistent with post-GOE absence of sulfur isotope mass-independent fractionation.

Oxidation of Archean upper mantle caused by crustal recycling

The redox evolution of Archean upper mantle impacted mantle melting and the nature of chemical equilibrium between mantle, ocean and atmosphere of the early Earth. Yet, the origin of these variations in redox remain controversial. Here we show that a global compilation of ∼3.8-2.5 Ga basalts can be subdivided into group B-1, showing modern mid-ocean ridge basalt-like features ((Nb/La)_PM ≥ 0.75), and B-2, which are similar to contemporary island arc-related basalts ((Nb/La)_PM < 0.75). Our V-Ti redox proxy indicates a more reducing upper mantle, and the results of both ambient and modified mantle obtained from B-1 and B-2 samples, respectively, exhibit a ∼1.0 log unit increase in their temporal evolution for most cratons. Increases in mantle oxygen fugacity are coincident with the changes in basalt Th/Nb ratios and Nd isotope ratios, indicating that crustal recycling played a crucial role, and this likely occurred either via plate subduction or lithospheric drips.

The basalt V-Ti redox proxy indicates that both of the Archean ambient and modified mantle exhibit a ~1.0 log unit increase in their evolution for most cratons, possibly derived by widespread crustal recycling.

The case and context for atmospheric methane as an exoplanet biosignature

Astronomers will soon begin searching for biosignatures, atmospheric gases or surface features produced by life, on potentially habitable planets. Since methane is the only biosignature that the James Webb Space Telescope could readily detect in terrestrial atmospheres, it is imperative to understand methane biosignatures to contextualize these upcoming observations. We explore the necessary planetary context for methane to be a persuasive biosignature and assess whether, and in what planetary environments, abiotic sources of methane could result in false-positive scenarios. With these results, we provide a tentative framework for assessing methane biosignatures. If life is abundant in the universe, then with the correct planetary context, atmospheric methane may be the first detectable indication of life beyond Earth.

Methane has been proposed as an exoplanet biosignature. Imminent observations with the James Webb Space Telescope may enable methane detections on potentially habitable exoplanets, so it is essential to assess in what planetary contexts methane is a compelling biosignature. Methane’s short photochemical lifetime in terrestrial planet atmospheres implies that abundant methane requires large replenishment fluxes. While methane can be produced by a variety of abiotic mechanisms such as outgassing, serpentinizing reactions, and impacts, we argue that—in contrast to an Earth-like biosphere—known abiotic processes cannot easily generate atmospheres rich in CH₄ and CO₂ with limited CO due to the strong redox disequilibrium between CH₄ and CO₂. Methane is thus more likely to be biogenic for planets with 1) a terrestrial bulk density, high mean-molecular-weight and anoxic atmosphere, and an old host star; 2) an abundance of CH₄ that implies surface fluxes exceeding what could be supplied by abiotic processes; and 3) atmospheric CO₂ with comparatively little CO.

Destabilization of deep oxidized mantle drove the Great Oxidation Event

The rise of Earth's atmospheric O₂ levels at ~2.4 Ga was driven by a shift between increasing sources and declining sinks of oxygen. Here, we compile recent evidence that the mantle shows a significant increase in oxidation state leading to the Great Oxidation Event (GOE), linked to sluggish upward mixing of a deep primordial oxidized layer. We simulate this scenario by implementing a new rheological model for this oxidized, bridgmanite-enriched viscous material and demonstrate slow mantle mixing in simulations of early Earth's mantle. The eventual homogenization of this layer may take ~2 Ga, in line with the timing of the observed mantle redox shift, and would result in the increase in upper mantle oxidation of >1 log(fO₂) unit. Such a shift would alter the redox state of volcanic degassing products to more oxidized species, removing a major sink of atmospheric O₂ and allowing oxygen levels to rise at ~2.4 Ga.

Decreasing extents of Archean serpentinization contributed to the rise of an oxidized atmosphere

At present, molecular hydrogen (H₂) produced through Fe(II) oxidation during serpentinization of ultramafic rocks represents a small fraction of the global sink for O₂ due to limited exposures of ultramafic rocks. In contrast, ultramafic rocks such as komatiites were much more common in the Early Earth and H₂ production via serpentinization was a likely factor in maintaining an O₂-free atmosphere throughout most of the Archean. Using thermodynamic simulations, this work quantifies the global O₂ consumption attributed to serpentinization during the past 3.5 billion years. Results show that H₂ generation is strongly dependent on rock compositions where serpentinization of more magnesian lithologies generated substantially higher amounts of H₂. Consumption of >2 Tmole O₂ yr^-1 via low-temperature serpentinization of Archean continents and seafloor is possible. This O₂ sink diminished greatly towards the end of the Archean as ultramafic rocks became less common and helped set the stage for the Great Oxidation Event.

Mercury abundance and isotopic composition indicate subaerial volcanism prior to the end-Archean "whiff" of oxygen

Earth's early atmosphere witnessed multiple transient episodes of oxygenation before the Great Oxidation Event 2.4 billion years ago (Ga) [e.g., A. D. Anbar et al., Science 317, 1903-1906 (2007); M. C. Koehler, R. Buick, M. E. Barley, Precambrian Res. 320, 281-290 (2019)], but the triggers for these short-lived events are so far unknown. Here, we use mercury (Hg) abundance and stable isotope composition to investigate atmospheric evolution and its driving mechanisms across the well-studied "whiff" of O₂ recorded in the ∼2.5-Ga Mt. McRae Shale from the Pilbara Craton in Western Australia [A. D. Anbar et al., Science 317, 1903-1906 (2007)]. Our data from the oxygenated interval show strong Hg enrichment paired with slightly negative ∆¹⁹⁹Hg and near-zero ∆²⁰⁰Hg, suggestive of increased oxidative weathering. In contrast, slightly older beds, which were evidently deposited under an anoxic atmosphere in ferruginous waters [C. T. Reinhard, R. Raiswell, C. Scott, A. D. Anbar, T. W. Lyons, Science 326, 713-716 (2009)], show Hg enrichment coupled with positive ∆¹⁹⁹Hg and slightly negative ∆²⁰⁰Hg values. This pattern is consistent with photochemical reactions associated with subaerial volcanism under intense UV radiation. Our results therefore suggest that the whiff of O₂ was preceded by subaerial volcanism. The transient interval of O₂ accumulation may thus have been triggered by diminished volcanic O₂ sinks, followed by enhanced nutrient supply to the ocean from weathering of volcanic rocks causing increased biological productivity.

Carbon cycle inverse modeling suggests large changes in fractional organic burial are consistent with the carbon isotope record and may have contributed to the rise of oxygen

Abundant geologic evidence shows that atmospheric oxygen levels were negligible until the Great Oxidation Event (GOE) at 2.4-2.1 Ga. The burial of organic matter is balanced by the release of oxygen, and if the release rate exceeds efficient oxygen sinks, atmospheric oxygen can accumulate until limited by oxidative weathering. The organic burial rate relative to the total carbon burial rate can be inferred from the carbon isotope record in sedimentary carbonates and organic matter, which provides a proxy for the oxygen source flux through time. Because there are no large secular trends in the carbon isotope record over time, it is commonly assumed that the oxygen source flux changed only modestly. Therefore, declines in oxygen sinks have been used to explain the GOE. However, the average isotopic value of carbon fluxes into the atmosphere-ocean system can evolve due to changing proportions of weathering and outgassing inputs. If so, large secular changes in organic burial would be possible despite unchanging carbon isotope values in sedimentary rocks. Here, we present an inverse analysis using a self-consistent carbon cycle model to determine the maximum change in organic burial since ~4 Ga allowed by the carbon isotope record and other geological proxies. We find that fractional organic burial may have increased by 2-5 times since the Archean. This happens because O₂ -dependent continental weathering of ¹³ C-depleted organics changes carbon isotope inputs to the atmosphere-ocean system. This increase in relative organic burial is consistent with an anoxic-to-oxic atmospheric transition around 2.4 Ga without declining oxygen sinks, although these likely contributed. Moreover, our inverse analysis suggests that the Archean absolute organic burial flux was comparable to modern, implying high organic burial efficiency and ruling out very low Archean primary productivity.

Time-resolved comparative molecular evolution of oxygenic photosynthesis

Oxygenic photosynthesis starts with the oxidation of water to O2, a light-driven reaction catalysed by photosystem II. Cyanobacteria are the only prokaryotes capable of water oxidation and therefore, it is assumed that the origin of oxygenic photosynthesis is a late innovation relative to the origin of life and bioenergetics. However, when exactly water oxidation originated remains an unanswered question. Here we use phylogenetic analysis to study a gene duplication event that is unique to photosystem II: the duplication that led to the evolution of the core antenna subunits CP43 and CP47. We compare the changes in the rates of evolution of this duplication with those of some of the oldest well-described events in the history of life: namely, the duplication leading to the Alpha and Beta subunits of the catalytic head of ATP synthase, and the divergence of archaeal and bacterial RNA polymerases and ribosomes. We also compare it with more recent events such as the duplication of Cyanobacteria-specific FtsH metalloprotease subunits and the radiation leading to Margulisbacteria, Sericytochromatia, Vampirovibrionia, and other clades containing anoxygenic phototrophs. We demonstrate that the ancestral core duplication of photosystem II exhibits patterns in the rates of protein evolution through geological time that are nearly identical to those of the ATP synthase, RNA polymerase, or the ribosome. Furthermore, we use ancestral sequence reconstruction in combination with comparative structural biology of photosystem subunits, to provide additional evidence supporting the premise that water oxidation had originated before the ancestral core duplications. Our work suggests that photosynthetic water oxidation originated closer to the origin of life and bioenergetics than can be documented based on phylogenetic or phylogenomic species trees alone.