1
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Wu Q, Huang SY. XDock: A General Docking Method for Modeling Protein-Ligand and Nucleic Acid-Ligand Interactions. J Chem Inf Model 2024. [PMID: 39602339 DOI: 10.1021/acs.jcim.4c00855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2024]
Abstract
Molecular docking is an essential computational tool in structure-based drug discovery and the investigation of the molecular mechanisms underlying biological processes. Despite the development of many molecular docking programs for various systems, a universal tool that can accurately dock ligands across multiple system types remains elusive. Meeting the need, we developed XDock, a versatile docking framework built for both protein-ligand and nucleic acid-ligand interactions. XDock efficiently accounts for ligand flexibility by docking multiple conformations of a ligand and flexibly refining the final binding poses. It utilizes a distance geometric method for ligand sampling and leverages our knowledge-based scoring functions for assessing protein-ligand and nucleic acid-ligand interactions. XDock has undergone extensive validations on diverse benchmarks of protein-ligand and nucleic acid-ligand complexes and was compared with six other docking methods, including DOCK 6, AutoDock Vina, PLANTS, LeDock, rDock, and RLDock. In addition, XDock is also computationally efficient and on average can dock a ligand within 1 min.
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Affiliation(s)
- Qilong Wu
- School of Physics, Huazhong University of Science and Technology, Wuhan, Hubei 430074, PR China
| | - Sheng-You Huang
- School of Physics, Huazhong University of Science and Technology, Wuhan, Hubei 430074, PR China
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2
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Amaya-Flórez A, Serrano-García JS, Ruiz-Galindo J, Arenaza-Corona A, Cruz-Navarro JA, Orjuela AL, Alí-Torres J, Flores-Alamo M, Cano-Sanchez P, Reyes-Márquez V, Morales-Morales D. POCOP-Ni(II) pincer compounds derived from phloroglucinol. Cytotoxic and antioxidant evaluation. Front Chem 2024; 12:1483999. [PMID: 39635578 PMCID: PMC11614598 DOI: 10.3389/fchem.2024.1483999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2024] [Accepted: 10/31/2024] [Indexed: 12/07/2024] Open
Abstract
POCOP-Ni(II) pincer compounds have primarily been explored as catalysts, but their potential biological activity has been scarcely studied. To address this gap, we evaluated the anticancer and antioxidant potential of four POCOP-Ni(II) complexes derived from phloroglucinol. A comprehensive supramolecular analysis, based on single-crystal X-ray diffraction (DRX) structures, was conducted using Hirshfeld surfaces and non-covalent interaction analysis. The cytotoxicity of all complexes was systematically assessed against various cancerous cell lines, as well as a non-cancerous cell line (COS-7). The results revealed that complexes 1b and 1c exhibited remarkable antiproliferative activity, with IC50 values ranging from 2.43 to 7.85 μM against cancerous cell lines U251, K562, HCT-15, MCF-7, and SK-LU-1. To further elucidate their mechanism of action, a competitive fluorescence displacement assay with ethidium bromide (EB) suggested that these complexes possess the ability to intercalate with DNA. This multifaceted investigation not only enhances our understanding of the biological potential of POCOP-Ni complexes but also provides valuable insights into their structural features and interactions, paving the way for future exploration in both catalytic and therapeutic domains.
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Affiliation(s)
- Andrés Amaya-Flórez
- Instituto de Química, Universidad Nacional Autónoma de México, Ciudad de México, Mexico
| | | | - Jordi Ruiz-Galindo
- Instituto de Química, Universidad Nacional Autónoma de México, Ciudad de México, Mexico
| | | | | | - Adrian L. Orjuela
- Departamento de Química, Universidad Nacional de Colombia-Sede Bogotá, Bogotá, Colombia
| | - Jorge Alí-Torres
- Departamento de Química, Universidad Nacional de Colombia-Sede Bogotá, Bogotá, Colombia
| | - Marcos Flores-Alamo
- Facultad de Química, División de Estudios de Posgrado, Universidad Nacional Autónoma de México, Mexico city, Mexico
| | - Patricia Cano-Sanchez
- Instituto de Química, Universidad Nacional Autónoma de México, Ciudad de México, Mexico
| | - Viviana Reyes-Márquez
- Departamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo, Sonora, Mexico
| | - David Morales-Morales
- Instituto de Química, Universidad Nacional Autónoma de México, Ciudad de México, Mexico
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3
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Yang CN, Liu W, Liu HT, Zhang JC, Long YT, Ying YL. Electrochemical kinetic fingerprinting of single-molecule coordinations in confined nanopores. Faraday Discuss 2024. [PMID: 39556019 DOI: 10.1039/d4fd00133h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2024]
Abstract
Metal centers are essential for enzyme catalysis, stabilizing the active site, facilitating electron transfer, and maintaining the structure through coordination with amino acids. In this study, K238H-AeL nanopores with histidine sites were designed as single-molecule reactors for the measurement of single-molecule coordination reactions. The coordination mechanism of Au(III) with histidine and glutamate in biological nanopore confined space was explored. Specifically, Au(III) interacts with the nitrogen (N) atom in the histidine imidazole ring of the K238H-AeL nanopore and the oxygen (O) atom in glutamate to form a stable K238H-Au-Cl2 complex. The formation mechanism of this complex was further validated through single-molecule nanopore analysis, mass spectrometry, and molecular dynamics simulations. Introducing histidine and negative charge amino acids with carboxyl group into different positions within the nanopore revealed that the formation of the histidine-Au coordination bond in the confined space requires a suitable distance between the ligand and the central metal atom. By analyzing the association and dissociation rates of the single Au(III) ion under the applied voltages, it was found that a confined nanopore increased the bonding rate constant of Au(III)-histidine coordination reactions by around 10-100 times compared to that in the bulk solution and the optimal voltage for single-molecule. Therefore, nanopore techniques for tracking single-molecule reactions could offer valuable insights into designing metalloenzymes in metal-catalyzed organic reactions.
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Affiliation(s)
- Chao-Nan Yang
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
| | - Wei Liu
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
| | - Hao-Tian Liu
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
| | - Ji-Chang Zhang
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
| | - Yi-Tao Long
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
| | - Yi-Lun Ying
- Molecular Sensing and Imaging Center, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, P. R. China.
- Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing, P. R. China
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4
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Fu X, Tian J, Zhang M, Jing Y, Liu Y, Song H, Wang Q. Biomimetic Dehydrogenative Intermolecular Formal Allylic Amidation of Branched α-Olefins. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024:e2411744. [PMID: 39556708 DOI: 10.1002/advs.202411744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2024] [Revised: 10/19/2024] [Indexed: 11/20/2024]
Abstract
Allylic amide moieties are commonly encountered in natural products and are privileged structures in pharmaceuticals and agrochemicals. Moreover, because allylic amide can be to converted into an array of high-value motifs, they have been widely employed in organic synthesis. However, the development of catalytic systems for intermolecular allylic amidation of olefins, particularly branched α-olefins, has proven to be challenging. Here, a biomimetic, synergistic catalytic method is reported that combines photoredox, cobalt, and Brønsted base catalysis for the synthesis of substituted allylic amides from branched α-olefins and simple imides without using oxidants. This low-cost, operationally simple method features a broad substrate scope and excellent functional group compatibility. Moreover, it is successfully used for the functionalization of several structurally complex molecules demonstrating the method's potential utility for medicinal chemistry applications. Mechanistic studies revealed that C(sp3)─N bond formation is mediated by a nitrogen-centered radical intermediate, which is generated via a sequence involving deprotonation and single-electron oxidation.
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Affiliation(s)
- Xiaoyang Fu
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Jiarui Tian
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Mingjun Zhang
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Yue Jing
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Yuxiu Liu
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Hongjian Song
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Qingmin Wang
- State Key Laboratory of Elemento-Organic Chemistry, Research Institute of Elemento-Organic Chemistry, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
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5
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Park S, Lee K, Padmanaban S, Lee Y. Small Molecule Activation at the acriPNP Pincer-Supported Nickel Sites. Acc Chem Res 2024; 57:3093-3101. [PMID: 39373712 DOI: 10.1021/acs.accounts.4c00401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/08/2024]
Abstract
ConspectusNickel pincer systems have recently attracted much attention for applications in various organometallic reactions and catalysis involving small molecule activation. Their exploration is in part motivated by the presence of nickel in natural systems for efficient catalysis. Among such systems, the nickel-containing metalloenzyme carbon monoxide dehydrogenase (CODH) efficiently and reversibly converts CO2 to CO at its active site. The generated CO moves through a channel from the CODH active site and is transported to a dinuclear nickel site of acetyl-coenzyme A synthase (ACS), which catalyzes organometallic C-S and C-C bond forming reactions. An analogous C-S bond activation process is also mediated by the nickel containing enzyme methyl-coenzyme M reductase (MCR). The nickel centers in these systems feature sulfur- and nitrogen-rich environments, and in the particular case of lactate racemase, an organometallic nickel pincer motif revealing a Ni-C bond is observed. These bioinorganic systems inspired the development of several nickel pincer scaffolds not only to mimic enzyme active sites and their reactivity but also to further extend low-valent organonickel chemistry. In this Account, we detail our continuing efforts in the chemistry of nickel complexes supported by acridane-based PNP pincer ligands focusing on our long-standing interest in biomimetic small molecule activation. We have employed a series of diphosphinoamide pincer ligands to prepare various nickel(II/I/0) complexes and to study the conversion of C1 chemicals such as CO and CO2 to value-added products. In the transformation of C1 chemicals, the key C-O bond cleavage and C-E bond (E = C, N, O, or S, etc.) formation steps typically require overcoming high activation barriers. Interestingly, enzymatic systems overcome such difficulties for C1 conversion and operate efficiently under ambient conditions with the use of nickel organometallic chemistry. Furthermore, we have extended our efforts to the conversion of NOx anions to NO via the sequential deoxygenation by nickel mediated carbonylation, which was applied to catalytic C-N coupling to produce industrially important organonitrogen compound oximes as a strategy for NOx conversion and utilization (NCU). Notably, the rigidified acriPNP pincer backbone that enforces a planar geometry at nickel was found to be an important factor for diversifying organometallic transformations including (a) homolysis of various σ-bonds mediated by T-shaped nickel(I) metalloradical species, (b) C-H bond activation mediated by a nickel(0) dinitrogen species, (c) selective CO2 reactivity of nickel(0)-CO species, (d) C-C bond formation at low-valent nickel(I or 0)-CO sites with iodoalkanes, and (e) catalytic deoxygenation of NOx anions and subsequent C-N coupling of a nickel-NO species with alkyl halides for oxime production. Broadly, our results highlight the importance of molecular design and the rich chemistry of organonickel species for diverse small molecule transformations.
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Affiliation(s)
- Sanha Park
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Kunwoo Lee
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Sudakar Padmanaban
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Yunho Lee
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
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6
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Delgado-Collado JM, Videa H, Serrano-Laguna PJ, Fuentes MÁ, Álvarez E, Díaz Quintana A, Martínez-Martínez AJ, Rodríguez-Delgado A, Cámpora J. Reversible Redox Ligand-Centered Reactivity in 2,6-Bisiminopyridine Aluminum Systems. Inorg Chem 2024; 63:19156-19166. [PMID: 39363552 PMCID: PMC11483753 DOI: 10.1021/acs.inorgchem.4c02664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Revised: 09/18/2024] [Accepted: 09/24/2024] [Indexed: 10/05/2024]
Abstract
We report the synthesis of cationic 2,6-bisiminopyridine organoaluminum complexes, [(BIP)AlR2]+, as stable BArF4- or PF6- salts, and their reversible single-electron reduction into well-defined paramagnetic species, [(BIP·)AlR2]. Four redox couples, [(BIP)AlR2]+/0, have been fully characterized through structural, spectroscopic, electrochemical and computational techniques.
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Affiliation(s)
- Juan Manuel Delgado-Collado
- Instituto
de Investigaciones Químicas, CSIC-Universidad
de Sevilla. Av. Américo
Vespucio, 49, Sevilla 41092, Spain
| | - Hellen Videa
- CIQSO-Center
for Research in Sustainable Chemistry and Department of Chemistry,
CSIC-Associated Unit, University of Huelva, Campus El Carmen, Huelva 21007, Spain
| | - Pablo J. Serrano-Laguna
- CIQSO-Center
for Research in Sustainable Chemistry and Department of Chemistry,
CSIC-Associated Unit, University of Huelva, Campus El Carmen, Huelva 21007, Spain
| | - M. Ángeles Fuentes
- CIQSO-Center
for Research in Sustainable Chemistry and Department of Chemistry,
CSIC-Associated Unit, University of Huelva, Campus El Carmen, Huelva 21007, Spain
| | - Eleuterio Álvarez
- Instituto
de Investigaciones Químicas, CSIC-Universidad
de Sevilla. Av. Américo
Vespucio, 49, Sevilla 41092, Spain
| | - Antonio Díaz Quintana
- Instituto
de Investigaciones Químicas, CSIC-Universidad
de Sevilla. Av. Américo
Vespucio, 49, Sevilla 41092, Spain
| | - Antonio J. Martínez-Martínez
- CIQSO-Center
for Research in Sustainable Chemistry and Department of Chemistry,
CSIC-Associated Unit, University of Huelva, Campus El Carmen, Huelva 21007, Spain
| | - Antonio Rodríguez-Delgado
- Instituto
de Investigaciones Químicas, CSIC-Universidad
de Sevilla. Av. Américo
Vespucio, 49, Sevilla 41092, Spain
| | - Juan Cámpora
- Instituto
de Investigaciones Químicas, CSIC-Universidad
de Sevilla. Av. Américo
Vespucio, 49, Sevilla 41092, Spain
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7
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Ge F, Zheng L, Wang Y, Feng C, Chen Y, Hu L, Liu H, Yang Y, Ma L, Cheng F, Wu XJ. Reversible Photochromic Phenomenon of Plasmonic Metal/Semiconductor Heterostructures via Photoinduced Electron Storage. NANO LETTERS 2024; 24:12285-12291. [PMID: 39311511 DOI: 10.1021/acs.nanolett.4c03564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/03/2024]
Abstract
The transfer and migration process of the photogenerated charge carriers in plasmonic metal/semiconductor heterostructures not only affects their photocatalytic performance but also triggers some captivating phenomena. Here, a reversible photochromic behavior is observed on the Au/CdS heterostructures when they are investigated as photocatalysts for hydrogen production. The photochromism takes place upon excitation of the CdS component, in which the photogenerated holes are rapidly consumed by ethanol, while the electrons are transferred and stored on the Au cores, resulting in the blue shift of their localized surface plasmon resonance. The colloidal solution can restore its initial color after pumping with air, and the photochromic behavior can be cycled five times without obvious degradation. The finding represents great progress toward the photochromic mechanism of metal/semiconductor heterostructures and also reveals the importance of understanding the dynamic process of the photogenerated charge carriers in these heterostructures.
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Affiliation(s)
- Feiyue Ge
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Lifang Zheng
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Yan Wang
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Changsheng Feng
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Yue Chen
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Lijun Hu
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Haixia Liu
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Youzhi Yang
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
| | - Li Ma
- State Key Laboratory for Organic Electronics and Information Displays & Jiangsu Key Laboratory for Biosensors, Institute of Advanced Materials, Jiangsu National Synergetic Innovation Center for Advanced Materials, Nanjing University of Posts and Telecommunications, Nanjing 210023, China
| | - Fang Cheng
- State Key Laboratory for Organic Electronics and Information Displays & Jiangsu Key Laboratory for Biosensors, Institute of Advanced Materials, Jiangsu National Synergetic Innovation Center for Advanced Materials, Nanjing University of Posts and Telecommunications, Nanjing 210023, China
| | - Xue-Jun Wu
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
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8
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Mukherjee N, Majumdar M. Diverse Functionality of Molecular Germanium: Emerging Opportunities as Catalysts. J Am Chem Soc 2024; 146:24209-24232. [PMID: 39172926 DOI: 10.1021/jacs.4c05498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/24/2024]
Abstract
Fundamental research on germanium as the central element in compounds for bond activation chemistry and catalysis has achieved significant feats over the last two decades. Designing strategies for small molecule activations and the ultimate catalysts established capitalize on the orbital modalities of germanium, apparently imitating the transition-metal frontier orbitals. There is a growing body of examples in contemporary research implicating the tunability of the frontier orbitals through avant-garde approaches such as geometric constrained empowered reactivity, bimetallic orbital complementarity, cooperative reactivity, etc. The goal of this Perspective is to provide readers with an overview of the emerging opportunities in the field of germanium-based catalysis by perceiving the underlying key principles. This will help to convert the discrete set of findings into a more systematic vision for catalyst designs. Critical exposition on the germanium's frontier orbitals participations evokes the key challenges involved in innovative catalyst designs, wherein viewpoints are provided. We close by addressing the forward-looking directions for germanium-based catalytic manifold development. We hope that this Perspective will be motivational for applied research on germanium as a constituent of pragmatic catalysts.
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Affiliation(s)
- Nilanjana Mukherjee
- Department of Chemistry, Indian Institute of Science Education and Research, Pune, Dr. Homi Bhabha Road, Pashan, Pune, Maharashtra 411008, India
| | - Moumita Majumdar
- Department of Chemistry, Indian Institute of Science Education and Research, Pune, Dr. Homi Bhabha Road, Pashan, Pune, Maharashtra 411008, India
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9
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Lorenzo Ocampo MV, Murray LJ. Ligand Noninnocence in β-Diketiminate and β-Diketimine Copper Complexes. Inorg Chem 2024; 63:15705-15715. [PMID: 39094038 DOI: 10.1021/acs.inorgchem.4c01613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/04/2024]
Abstract
Metal-ligand cooperative systems have a long precedent in catalysis, with the classification depending on the site of substrate bond cleavage and formation and on redox state changes. Recently, our group reported the participation of a β-diketiminate ligand in chemical bonding to heterocumulenes such as CO2 and CS2 by tricopper complexes, leading to cooperative catalysis. Herein, we report the reactivity of these copper clusters, [Cu3EL]- (E = S, Se; L = tris(β-diketiminate) cyclophane ligand), toward other electrophiles, viz. alkyl halides and Brønsted acids. We identified a family of ligand-functionalized complexes, Cu3EL (R) (R = primary alkyls), and a series of disubstituted products, Cu3EL (R)2, through single-crystal X-ray diffraction, mass spectrometry, and infrared and UV-visible spectroscopy. As part of mechanistic studies on these alkylation reactions, we evaluated the acid-base reactivity of these complexes and the influence of the backbone substitution on the reduction potential. Implications of these findings for ligand noninnocence and the relevance of the metal core as a cofactor for the ligand's reactivity are discussed.
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Affiliation(s)
- M Victoria Lorenzo Ocampo
- Center for Catalysis, Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Leslie J Murray
- Center for Catalysis, Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
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10
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Wang Y, Huang Y, Wang X, Jiang J. Exploring Enzyme-Mimicking Metal-Organic Frameworks for CO 2 Conversion through Vibrational Spectra-Based Machine Learning. J Phys Chem Lett 2024; 15:6654-6661. [PMID: 38889050 DOI: 10.1021/acs.jpclett.4c01225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2024]
Abstract
In pursuing the benefits of natural enzyme catalysts while overcoming their limitations, we find metal-organic frameworks (MOFs), renowned for their highly tunable functionalities, stand out in biomimetic applications. We used unsupervised machine learning on density functional theory-computed vibrational infrared and Raman spectral features to screen 300 Zn-MOFs for CO2 conversion, similar to carbonic anhydrase (CA). Our findings confirmed that MOFs with spectroscopic attributes closely resembling those of CA hold the potential for replicating CA's electronic and catalytic properties. Unlike previous studies that relied on heuristic or trial-and-error methods and focused on geometric configurations, our research uses vibrational spectral features to explore structure-property relationships, making them more accessible through spectroscopy. Moreover, we highlight vibrational spectral features as efficient carriers for highly dimensional chemical information, enabling the simultaneous optimization of multiple performance parameters. These findings pave the way for pioneering designs of enzyme-mimetic MOFs and concurrently expand the application scope of spectroscopic tools in biomimetic catalysis.
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Affiliation(s)
- Yang Wang
- Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Yan Huang
- Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - X Wang
- Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jun Jiang
- Key Laboratory of Precision and Intelligent Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, China
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11
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Karnbrock SBH, Golz C, Alcarazo M. P(V)-bis(amidophenolate) ligand cooperation: stoichiometric CO-bond cleavage in aldehydes and ketones. Chem Commun (Camb) 2024; 60:6745-6748. [PMID: 38864327 DOI: 10.1039/d4cc02202e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2024]
Abstract
The cooperation between a geometrically constrained, highly electrophilic phosphorus(V) center, and an electronically rich tetradentate bis(amidophenolate) ligand enables the cleavage of the CO bond from typical aldehydes and ketones delivering iminio phosphoramidate species. The amphiphilic nature of these products, which is demonstrated through their reaction with typical Lewis acids and bases, enables their use as a mild source of silylium cations from silanes, allowing the selective reductive coupling of aldehydes to ethers under catalytic conditions.
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Affiliation(s)
- Simon B H Karnbrock
- Institute of Organic and Biomolecular Chemistry, University of Göttingen, Tammannstraße 2, 37077 Göttingen, Germany.
| | - Christopher Golz
- Institute of Organic and Biomolecular Chemistry, University of Göttingen, Tammannstraße 2, 37077 Göttingen, Germany.
| | - Manuel Alcarazo
- Institute of Organic and Biomolecular Chemistry, University of Göttingen, Tammannstraße 2, 37077 Göttingen, Germany.
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12
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Kumar M, Nayek HP. Syntheses and exploration of the catalytic activities of organotin(IV) compounds. Dalton Trans 2024; 53:9827-9837. [PMID: 38804088 DOI: 10.1039/d4dt00646a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
Abstract
Six organotin(IV) compounds (1-6) have been synthesized by reaction of the polydentate pro-ligands H3L and H2L, respectively, with the corresponding diorganotin chlorides. All of the compounds were characterized by FT-IR spectroscopy, 1H, 13C{1H}, and 119Sn (1H) NMR spectroscopy, HRMS spectrometry, and single-crystal X-ray diffraction. The solid-state structures show that all of the compounds are monomeric (except compound 3) and contain a penta-coordinated tin atom. Compound 3 is a dimer with two hexa-coordinated tin atoms. Compounds 1-3 contain a non-coordinated hydroxymethyl group. All of the compounds have been screened for their catalytic efficacy in the synthesis of 1,2 disubstituted benzimidazoles using o-phenylenediamine and aldehyde derivatives. It has been observed that both the Lewis acidic Sn(IV) centre and the hydroxymethyl group (hydrogen bond donor) catalyse the reactions with a product yield of up to 92%.
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Affiliation(s)
- Manish Kumar
- Department of Chemistry & Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, Jharkhand, India.
| | - Hari Pada Nayek
- Department of Chemistry & Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, Jharkhand, India.
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13
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Birchall N, Nieger M, Gudat D. The Noble Addendum of a Phosphenium Ligand to a Base Metal: Coordination, Activation, and Hydrogenation of Alkenes and Alkynes on a Chromium Complex. Chempluschem 2024; 89:e202400144. [PMID: 38517052 DOI: 10.1002/cplu.202400144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Revised: 03/20/2024] [Accepted: 03/21/2024] [Indexed: 03/23/2024]
Abstract
The synthesis of a new bis-NHP complex (NHP=N-heterocyclic phosphenium) of chromium via salt metathesis and studies of its reactivity are reported. Photochemical reactions with H2 and selected olefins give rise to non-isolable H2- and π-alkene complexes identified spectroscopically, while internal alkynes react via activation of the triple bond to yield isolable metalla-phospha-cyclobutenes characterized by spectroscopic and XRD data. DFT studies give a preliminary account of the bonding in H2- and alkene-complexes and explain the different reactivity towards alkenes and alkynes as the consequence of kinetic effects. Photolysis of the bis-NHP-complex in the presence of H2 and olefins or alkenes enables the catalytic hydrogenation of the organic substrates, while the π-ethene complex mediates the catalytic hydrogenation of ethene in a dark reaction. The similarities and differences between both catalytic processes are shortly discussed.
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Affiliation(s)
- Nicholas Birchall
- Institut für Anorganische Chemie, University of Stuttgart, Pfaffenwaldring 55, 70550, Stuttgart, Germany
| | - Martin Nieger
- Department of Chemistry, University of Helsinki, P.O Box 55, 00014, Helsinki, Finland
| | - Dietrich Gudat
- Institut für Anorganische Chemie, University of Stuttgart, Pfaffenwaldring 55, 70550, Stuttgart, Germany
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14
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Yan B, Ma P, Shu X, Yin W, Guo W. Merging of Palladium and Organocatalysis Enabled Asymmetric Decarboxylative (2+1) Cycloadditions toward Cyclopropanes. Org Lett 2024; 26:4274-4279. [PMID: 38727082 DOI: 10.1021/acs.orglett.4c01088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2024]
Abstract
A cascade reaction enabling enantio- and diastereoselective construction of strained cyclopropanes is described. This asymmetric (2+1) annulation process uses vinyl methylene carbonate and 2-cyanoacrylate as reaction partners in the presence of Pd(PPh3)4 as a precatalyst and an enantioenriched phosphoramidite ligand featuring a morpholine functionality. Mechanistic investigations unveil that the PPh3 derived from the Pd(PPh3)4 and the morpholine-containing phosphoramidite work as cooperative phosphorus and Brønsted base catalysts to promote the reaction.
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Affiliation(s)
- Biwei Yan
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Xi'an 710049, China
| | - Pengchen Ma
- School of Chemistry, Xi'an Key Laboratory of Sustainable Energy Material Chemistry and Engineering Research Center of Energy Storage Materials and Devices, Ministry of Education, Xi'an Jiaotong University, Xi'an 710049, China
| | - Xiao Shu
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Xi'an 710049, China
| | - Wenhao Yin
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Xi'an 710049, China
| | - Wusheng Guo
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Xi'an 710049, China
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15
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Ramspoth TF, Kootstra J, Harutyunyan SR. Unlocking the potential of metal ligand cooperation for enantioselective transformations. Chem Soc Rev 2024; 53:3216-3223. [PMID: 38381077 PMCID: PMC10985679 DOI: 10.1039/d3cs00998j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Indexed: 02/22/2024]
Abstract
Metal-ligand cooperation, in which both the metal and the ligand of a transition metal complex actively participate in chemical transformations leading to enhanced reactivity or selectivity in chemical reactions, has emerged as a powerful and versatile concept in catalysis. This Viewpoint discusses the development trajectory of transition metal-based complexes as catalysts in (de)hydrogenative processes, in particular those cases where metal-ligand cooperation has been invoked to rationalise the observed high reactivities and excellent selectivities. The historical context, mechanistic aspects and current applications are discussed with the suggestion to explore the potential of the MLC mode of action of such catalysts in enantioselective transformations beyond (de)hydrogenative processes.
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Affiliation(s)
- Tizian-Frank Ramspoth
- Institute for Chemistry, University of Groningen Institution Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
| | - Johanan Kootstra
- Institute for Chemistry, University of Groningen Institution Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
| | - Syuzanna R Harutyunyan
- Institute for Chemistry, University of Groningen Institution Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
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16
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Morris RH. Reactivity umpolung (reversal) of ligands in transition metal complexes. Chem Soc Rev 2024; 53:2808-2827. [PMID: 38353155 DOI: 10.1039/d3cs00979c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
The success and power of homogeneous catalysis derives in large part from the wide choice of transition metal ions and their ligands. This tutorial review introduces examples where the reactivity of a ligand is completely reversed (umpolung) from Lewis basic/nucleophilic to acidic/electrophilic or vice versa on changing the metal and co-ligands. Understanding this phenomenon will assist in the rational design of catalysts and the understanding of metalloenzyme mechanisms. Labelling a metal and ligand with Seebach donor and acceptor labels helps to identify whether a reaction involving the intermolecular attack on the ligand is displaying native reactivity or reactivity umpolung. This has been done for complexes of nitriles, carbonyls, isonitriles, dinitrogen, Fischer carbenes, alkenes, alkynes, hydrides, methyls, methylidenes and alkylidenes, silylenes, oxides, imides/nitrenes, alkylidynes, methylidynes, and nitrides. The electronic influence of the metal and co-ligands is discussed in terms of the energy of (HOMO) d electrons. The energy can be related to the pKLACa (LAC is ligand acidity constant) of the theoretical hydride complexes [H-[M]-L]+ formed by the protonation of pair of valence d electrons on the metal in the [M-L] complex. Preliminary findings indicate that a negative pKLACa indicates that nucleophilic attack by a carbanion or amine on the ligand will likely occur while a positive pKLACa indicates that electrophilic attack by strong acids on the ligand will usually occur when the ligand is nitrile, carbonyl, isonitrile, alkene and η6-arene.
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Affiliation(s)
- Robert H Morris
- Department of Chemistry, University of Toronto, 80 Saint George St., Toronto, Ontario, Canada, M5S3H6.
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17
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Chen Y, Yang X, Li K, Feng J, Liu X, Li Y, Yang K, Li J, Ge S. Phenolic Ligand-Metal Charge Transfer Induced Copper Nanozyme with Reactive Oxygen Species-Scavenging Ability for Chronic Wound Healing. ACS NANO 2024; 18:7024-7036. [PMID: 38394383 DOI: 10.1021/acsnano.3c10376] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/25/2024]
Abstract
Chronic wounds frequently arise as a complication in diabetic patients, and their management remains a significant clinical hurdle due to their nonhealing nature featured by heightened oxidative stress and impaired healing cells at the wound site. Herein, we present a 2D copper antioxidant nanozyme induced by phenolic ligand-metal charge transfer (LMCT) to eliminate reactive oxygen species (ROS) and facilitate the healing of chronic diabetic wounds. We found that polyphenol ligands coordinated on the Cu3(PO4)2 nanosheets led to a strong charge transfer at the interface and regulated the valence states of Cu. The obtained Cu nanozyme exhibited efficient scavenging ability toward different oxidative species and protected human cells from oxidative damage. The nanozyme enhanced the healing of diabetic wounds by promoting re-epithelialization, collagen deposition, angiogenesis, and immunoregulation. This work demonstrates the LMCT-induced ROS scavenging ability on a nanointerface, providing an alternative strategy of constructing metal-based nanozymes for the treatment of diabetic wounds as well as other diseases.
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Affiliation(s)
- Yi Chen
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Xiaoru Yang
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Kai Li
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Junkun Feng
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Xiaoyi Liu
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Yixuan Li
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Keyi Yang
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Jianhua Li
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
| | - Shaohua Ge
- Department of Peirodontology and Biomaterials, School and Hospital of Stomatology, Cheeloo College of Medicine, Shandong University, Shandong Key Laboratory of Oral Tissue Regeneration, Shandong Engineering Research Center of Dental Materials and Oral Tissue Regeneration, and Shandong Provincial Clinical Research Center for Oral Diseases, Jinan 250012, China
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18
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Khatal SB, Purkayastha SK, Guha AK, Tothadi S, Pratihar S. Enhancing Precatalyst Performance and Robustness through Aromaticity: Insights from Iridaheteroaromatics. J Org Chem 2024; 89:2480-2493. [PMID: 38308648 DOI: 10.1021/acs.joc.3c02504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2024]
Abstract
Despite the inherent stability-enhancing benefits of dπ-pπ conjugation-induced aromaticity, metallaaromatic catalysts remain underutilized in this context, despite their reactivity with organic functionalities in stoichiometric reactions. We present a strategy for synthesizing a diverse range of iridaheteroaromatics, (L^L)IrIII(Cp*)I, including iridapyridylidene-indole, iridapyridene-indole, and iridaimidazole, via in situ deprotonation/metalation reactions utilizing [Cp*IrCl2]2 and the respective ligands. These catalysts exhibit enhanced σ-donor and π-acceptor properties, intrinsic σ-π continuum attributes, and versatile binding sites, contributing to stability through enhanced dπ-pπ conjugation-induced aromaticity. Spectroscopic data, X-ray crystallographic data, and density functional theory calculations confirm their aromaticity. These iridaheteroaromatics exhibit formidable catalytic ability across a spectrum of transformations under industrially viable conditions, notably excelling in highly selective cross alkylation and β-alkylation of alcohols and an eco-friendly avenue for quinolone synthesis, achieving remarkably high turnover frequencies (TOFs). Additionally, this method extends to the self-condensation of bioalcohols like ethanol, n-butanol, and n-hexanol in water, replicating conditions frequently encountered in primary fermentation solutions. These iridaheteroaromatics exhibit strong catalytic activity with fast reaction rates, high TOFs, broad substrate compatibility, and remarkable selectivity, displaying their potential as robust catalysts in large-scale applications and emphasizing their practical significance beyond their structural and theoretical importance.
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Affiliation(s)
- Sandip Bapu Khatal
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Inorganic Materials and Catalysis Division, CSIR-Central Salt & Marine Chemicals Research Institute, G. B. Marg, Bhavnagar 364002, Gujarat, India
| | | | - Ankur K Guha
- Advanced Computational Chemistry Centre, Cotton University, Panbazar, Guwahati, Assam 781001, India
| | - Srinu Tothadi
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Analytical and Environmental Sciences Division and Centralized Instrumentation Facility, CSIR-Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Marg, Bhavnagar 364002, India
| | - Sanjay Pratihar
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Inorganic Materials and Catalysis Division, CSIR-Central Salt & Marine Chemicals Research Institute, G. B. Marg, Bhavnagar 364002, Gujarat, India
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19
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Xue M, Peng Z, Tao K, Jia J, Song D, Tung CH, Wang W. Catalytic hydrogenation of olefins by a multifunctional molybdenum-sulfur complex. Nat Commun 2024; 15:797. [PMID: 38280870 PMCID: PMC10821942 DOI: 10.1038/s41467-024-45018-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 01/12/2024] [Indexed: 01/29/2024] Open
Abstract
Exploration of molybdenum complexes as homogeneous hydrogenation catalysts has garnered significant attention, but hydrogenation of unactivated olefins under mild conditions are scarce. Here, we report the synthesis of a molybdenum complex, [Cp*Mo(Ph2PC6H4S-CH = CH2)(Py)]+ (2), which exhibits intriguing reactivity toward C2H2 and H2 under ambient pressure. This vinylthioether complex showcases efficient catalytic activity in the hydrogenation of various aromatic and aliphatic alkenes, demonstrating a broad substrate scope without the need for any additives. The catalytic pathway involves an uncommon oxidative addition of H2 to the cationic Mo(II) center, resulting in a Mo(IV) dihydride intermediate. Moreover, complex 2 also shows catalytic activity toward C2H2, leading to the production of polyacetylene and the extension of the vinylthioether ligand into a pendant triene chain.
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Affiliation(s)
- Minghui Xue
- School of Chemistry and Chemical Engineering, Shandong University, 250100, Jinan, China
| | - Zhiqiang Peng
- College of Chemistry, Beijing Normal University, 100875, Beijing, China
| | - Keyan Tao
- College of Chemistry, Beijing Normal University, 100875, Beijing, China
| | - Jiong Jia
- School of Chemistry and Chemical Engineering, Shandong University, 250100, Jinan, China
| | - Datong Song
- Davenport Chemical Research Laboratories, Department of Chemistry, University of Toronto, Toronto, ON, M5S 3H6, Canada.
| | - Chen-Ho Tung
- School of Chemistry and Chemical Engineering, Shandong University, 250100, Jinan, China
| | - Wenguang Wang
- School of Chemistry and Chemical Engineering, Shandong University, 250100, Jinan, China.
- College of Chemistry, Beijing Normal University, 100875, Beijing, China.
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20
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Ocampo MVL, Murray LJ. Metal-Tuned Ligand Reactivity Enables CX 2 (X = O, S) Homocoupling with Spectator Cu Centers. J Am Chem Soc 2024; 146:1019-1025. [PMID: 38165085 DOI: 10.1021/jacs.3c11928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
Ligand non-innocence is ubiquitous in catalysis with ligands in synthetic complexes contributing as electron reservoirs or co-sites for substrate activation. The latter chemical non-innocence is manifested in H+ storage or relay at sites beyond the metal primary coordination sphere. Reaction of a competent CO2-to-oxalate reduction catalyst, namely, [K(THF)3](Cu3SL), where L3- is a tris(β-diketiminate) cyclophane, with CS2 affords tetrathiooxalate at long reaction times or at high CS2 concentrations, where otherwise an equilibrium is established between the starting species and a complex-CS2 adduct in which the CS2 is bound to the C atom on the ligand backbone. X-ray diffraction analysis of this adduct reveals no apparent metal participation, suggesting an entirely ligand-based reaction controlled by the charge state of the cluster. Thermodynamic parameters for the formation of the aforementioned Cligand-CS2 bond were experimentally determined, and trends with cation Lewis acidity were studied, where more acidic cations shift the equilibrium toward the adduct. Relevance of such an adduct in the reduction of CO2 to oxalate by this complex is supported by DFT studies, similar effects of countercation Lewis acidity on product formation, and the homocoupled heterocumulene product speciation as determined by isotopic labeling studies. Taken together, this system extends chemical non-innocence beyond H+ to effect catalytic transformations involving C-C bond formation and represents the rarest example of metal-ligand cooperativity, that is, spectator metal ion(s) and the ligand as the reaction center.
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Affiliation(s)
- M Victoria Lorenzo Ocampo
- Center for Catalysis, Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Leslie J Murray
- Center for Catalysis, Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
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21
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Papendick M, Gudat D. Reversible Binding of Hydrogen and Styrene Coordination on a Manganese Phosphenium Complex. Chemistry 2023; 29:e202302525. [PMID: 37650872 DOI: 10.1002/chem.202302525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 08/30/2023] [Accepted: 08/31/2023] [Indexed: 09/01/2023]
Abstract
The reactions of two complexes [(R NHP)Mn(CO)4 ] (R NHP=N-arylated N-heterocyclic phosphenium) with H2 at elevated pressure (≈4 bar) were studied by NMR spectroscopy. Irradiation with UV light initialized in one case (5 a, R=Dipp) the unselective formation of (R NHP-H)MnH(CO)4 ] (6 a) via cooperative addition of H2 across the Mn=P double bond. In the other case (5 b, R=Mes), addition of H2 was unobservable and the reaction proceeded via decarbonylation to a dimeric species [(R NHP)2 Mn2 (CO)7 ] (7 b) that was isolated and identified spectroscopically. Taking into account the outcome of further reaction studies under various conditions in the absence and presence of H2 , both transformations can be explained in the context of a common mechanism involving decarbonylation to 7 a,b as the first step, and the different outcome is attributable to the fact that 7 b is unreactive towards both H2 and CO while 7 a is not. DFT studies relate this divergence to deviations in the molecular constitution and stability arising from a different level of steric congestion. Preliminary studies suggest further that 5 a/H2 as well as 6 a enable the photo-induced hydrogenation of styrene to ethyl benzene, even if the mechanism and possibly catalytic nature of this process remain yet unknown.
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Affiliation(s)
- Marius Papendick
- Institut für Anorganische Chemie, University of Stuttgart, Pfaffenwaldring 55, 70550, Stuttgart, Germany
| | - Dietrich Gudat
- Institut für Anorganische Chemie, University of Stuttgart, Pfaffenwaldring 55, 70550, Stuttgart, Germany
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22
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Meizyte G, Brown RH, Brewer EI, Watson PD, Mackenzie SR. A Combined Infrared and Computational Study of Gas-Phase Mixed-Ligand Rhodium Complexes: Rh(CO) n(N 2O) m+ ( n = 1-5, m = 1-4). J Phys Chem A 2023; 127:9220-9228. [PMID: 37906705 PMCID: PMC10641848 DOI: 10.1021/acs.jpca.3c05078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 10/02/2023] [Accepted: 10/03/2023] [Indexed: 11/02/2023]
Abstract
In this study, mixed carbonyl and nitrous oxide complexes with Rh+ were studied by mass-selective infrared photodissociation spectroscopy in a molecular beam. The infrared spectra, recorded in the region of the CO and N2O N═N stretches, were assigned and interpreted with the aid of simulated spectra of low-energy structural isomers. Clear evidence of an inner coordination shell of four ligands is observed. The observed vibrational structure can be understood on the basis of local mode vibrations in the two ligands. However, there is also evidence of multiple low-lying isomers and cooperative binding effects between the two ligands. In particular, σ donation from directly coordinated nitrous oxide ligands drives more classical carbonyl bonding than has been observed in pure carbonyl complexes. The observed fragmentation branching ratios following resonant infrared absorption are explained by simple statistical and energetic arguments, providing a contrast with those of equivalent Au+ complexes.
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Affiliation(s)
- Gabriele Meizyte
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry
Laboratory, South Parks Road, Oxford, United Kingdom, OX1 3QZ
| | - Rachael H. Brown
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry
Laboratory, South Parks Road, Oxford, United Kingdom, OX1 3QZ
| | - Edward I. Brewer
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry
Laboratory, South Parks Road, Oxford, United Kingdom, OX1 3QZ
| | - Peter D. Watson
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry
Laboratory, South Parks Road, Oxford, United Kingdom, OX1 3QZ
| | - Stuart R. Mackenzie
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry
Laboratory, South Parks Road, Oxford, United Kingdom, OX1 3QZ
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23
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Sun H, He H, Ni SF, Guo W. Asymmetric (4+1) Annulations by Cascade Allylation and Transient σ-Alkyl-Pd(II) Initiated Allylic Csp 3 -H Activation. Angew Chem Int Ed Engl 2023:e202315438. [PMID: 37920927 DOI: 10.1002/anie.202315438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Revised: 10/31/2023] [Accepted: 11/02/2023] [Indexed: 11/04/2023]
Abstract
A unique Pd-catalyzed approach for asymmetric (4+1) annulations via cascade allylation and transient σ-alkyl-Pd(II) initiated methylene Csp3 -H activation is reported. The enolate fragment derived from the decarboxylation of vinyl methylene carbonate is crucial to stabilize the key intermediate. These reactions enable the synthesis of various useful dihydrobenzofurans with excellent enantioselectivity, typically >95 : 5 er, and exclusive (Z)-stereoselectivity. Compared with the well-established annulations via Heck-type C-H activations, this protocol showcases a conceptually new way to generate σ-alkyl-Pd(II) species that could initiate challenging asymmetric Csp3 -H activations.
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Affiliation(s)
- Haiyu Sun
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Yanxiang Road 99, Xi'an, 710045, China
| | - Hui He
- Department of Chemistry, Shantou University, Shantou, 515063, China
| | - Shao-Fei Ni
- Department of Chemistry, Shantou University, Shantou, 515063, China
| | - Wusheng Guo
- Frontier Institute of Science and Technology (FIST), Xi'an Jiaotong University, Yanxiang Road 99, Xi'an, 710045, China
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24
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Gopakumar K, Samantaray V, Prusty MK, Swain L, Ramanan R. Internal charge-transfer in a metal-catalyzed oxidative addition reaction turns an inhibitive electric field stimulus to catalytic. Chem Commun (Camb) 2023; 59:13054-13057. [PMID: 37846773 DOI: 10.1039/d3cc04283a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2023]
Abstract
In a metal-catalyzed oxidative addition, an oriented external electric field (EEF) catalyzes the reaction along one direction and inhibits it when applied in the opposite direction. Beyond a threshold value, the inhibitory direction becomes catalyzing by swapping the metal-to-ligand charge transfer (MLCT) to ligand-to-metal charge-transfer (LMCT) or vice versa. The change in direction of the charge-transfer mechanism triggers the inversion of the dipole moment along the reaction axis, that results in the resurgence of catalysis. The charge-transfer mechanism in metal-catalyzed oxidative addition is tunable by EEF.
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Affiliation(s)
- Karthik Gopakumar
- Department of Chemistry, National Institute of Technology, Rourkela, Rourkela, Odisha, 769008, India.
| | - Vivekananda Samantaray
- Department of Chemistry, National Institute of Technology, Rourkela, Rourkela, Odisha, 769008, India.
| | - Mithun Kumar Prusty
- Department of Chemistry, National Institute of Technology, Rourkela, Rourkela, Odisha, 769008, India.
| | - Lopita Swain
- Department of Chemistry, National Institute of Technology, Rourkela, Rourkela, Odisha, 769008, India.
| | - Rajeev Ramanan
- Department of Chemistry, National Institute of Technology, Rourkela, Rourkela, Odisha, 769008, India.
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25
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Fernández S, Fernando S, Planas O. Cooperation towards nobility: equipping first-row transition metals with an aluminium sword. Dalton Trans 2023; 52:14259-14286. [PMID: 37740303 DOI: 10.1039/d3dt02722h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/24/2023]
Abstract
The exploration for noble metals substitutes in catalysis has become a highly active area of research, driven by the pursuit of sustainable chemical processes. Although the utilization of base metals holds great potential as an alternative, their successful implementation in predictable catalytic processes necessitates the development of appropriate ligands. Such ligands must be capable of controlling their intricate redox chemistry and promote two-electron events, thus mimicking well-established organometallic processes in noble metal catalysis. While numerous approaches for infusing nobility to base metals have been explored, metal-ligand cooperation has garnered significant attention in recent years. Within this context, aluminium-based ligands offer interesting features to fine-tune the activity of metal centres, but their application in base metal catalysis remains largely unexplored. This perspective seeks to highlight the most recent breakthroughs in the reactivity of heterobimetallic aluminium-base-metal complexes, while also showcasing their potential to develop novel and predictable catalytic transformations. By turning the spotlight on such heterobimetallic species, we aim to inspire chemists to explore aluminium-base-metal species and expand the range of their applications as catalysts.
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Affiliation(s)
- Sergio Fernández
- Queen Mary University of London, School of Physical and Chemical Sciences, Department of Chemistry, Mile End Road, London E1 4NS, UK.
| | - Selwin Fernando
- Queen Mary University of London, School of Physical and Chemical Sciences, Department of Chemistry, Mile End Road, London E1 4NS, UK.
| | - Oriol Planas
- Queen Mary University of London, School of Physical and Chemical Sciences, Department of Chemistry, Mile End Road, London E1 4NS, UK.
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26
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Nath S, Yadav E, Raghuvanshi A, Singh AK. Ru(II) Complexes with Protic- and Anionic-Naked-NHC Ligands for Cooperative Activation of Small Molecules. Chemistry 2023; 29:e202301971. [PMID: 37377294 DOI: 10.1002/chem.202301971] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 06/27/2023] [Accepted: 06/28/2023] [Indexed: 06/29/2023]
Abstract
A set of ruthenium(II)-protic-N-heterocyclic carbene complexes, [Ru(NNCH )(PPh3 )2 (X)]Cl (1, X=Cl and 2, X=H) and their deprotonated forms [Ru(NNC)(PPh3 )2 (X)] (1', X=Cl and 2', X=H), in which NNC is a new unsymmetrical pincer ligand, are reported. The four complexes are interconvertible by simple acid-base chemistry. The combined theoretical and spectroscopic investigations indicate charge segregation in anionic-NHC complexes (1' and 2') and can be described from a Lewis pair perspective. The chemical reactivity of deprotonated complex 1' shows cooperative small molecule activation. Complex 1' activates H-H bond of hydrogen, C(sp3 )-I bond of iodomethane, and C(sp)-H bond of phenylacetylene. The activation of CO2 using anionic NHC complex 1' at moderate temperature and ambient pressure and subsequent conversion to formate is also described. All the new compounds have been characterized using ESI-MS, 1 H, 13 C, and 31 P NMR spectroscopy. Molecular structures of 1, 2, and 2' have also been determined with single-crystal X-ray diffraction. The cooperative small molecule activation perspective broadens the scope of potential applications of anionic-NHC complexes in small molecule activation, including the conversion of carbon dioxide to formate, a much sought after reaction in the renewable energy and sustainable development domains.
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Affiliation(s)
- Shambhu Nath
- Department of Chemistry, Indian Institute of Technology Indore, Simrol, Indore, 453552, India
| | - Ekta Yadav
- Department of Chemistry, Indian Institute of Technology Indore, Simrol, Indore, 453552, India
| | - Abhinav Raghuvanshi
- Department of Chemistry, Indian Institute of Technology Indore, Simrol, Indore, 453552, India
| | - Amrendra K Singh
- Department of Chemistry, Indian Institute of Technology Indore, Simrol, Indore, 453552, India
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27
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Li S, Zhu H, Li L, Chen W, Jiang J, Qu ZW, Grimme S, Zhang YQ. A Nuclearity-Dependent Enantiodivergent Epoxide Opening via Enthalpy-Controlled Mononuclear and Entropy-Controlled Dinuclear (Salen)Titanium Catalysis. Angew Chem Int Ed Engl 2023; 62:e202309525. [PMID: 37489882 DOI: 10.1002/anie.202309525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 07/22/2023] [Accepted: 07/25/2023] [Indexed: 07/26/2023]
Abstract
A nuclearity-dependent enantiodivergent epoxide opening reaction has been developed, in which both antipodes of chiral alcohol products are selectively accessed by mononuclear (salen)TiIII complex and its self-assembled oxygen-bridged dinuclear counterparts within the same stereogenic ligand scaffold. Kinetic studies based on the Eyring equation revealed an enthalpy-controlled enantio-differentiation mode in mononuclear catalysis, whereas an entropy-controlled one in dinuclear catalysis. DFT calculations outline the origin of the enantiocontrol of the mononuclear catalysis and indicate the actual catalyst species in the dinuclear catalytic system. The mechanistic insights may shed a light on a strategy for stereoswichable asymmetric catalysis utilizing nuclearity-distinct transition-metal complexes.
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Affiliation(s)
- Shengxiao Li
- Department of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China
| | - Hui Zhu
- Mulliken Center for Theoretical Chemistry, University of Bonn, Beringstrasse 4, 53115, Bonn, Germany
| | - Longfei Li
- Department of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China
| | - Wanjiao Chen
- Department of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China
| | - Jie Jiang
- Department of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China
| | - Zheng-Wang Qu
- Mulliken Center for Theoretical Chemistry, University of Bonn, Beringstrasse 4, 53115, Bonn, Germany
| | - Stefan Grimme
- Mulliken Center for Theoretical Chemistry, University of Bonn, Beringstrasse 4, 53115, Bonn, Germany
| | - Yong-Qiang Zhang
- Department of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China
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28
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Wang Q, Chen K, Jiang H, Chen C, Xiong C, Chen M, Xu J, Gao X, Xu S, Zhou H, Wu Y. Cell-inspired design of cascade catalysis system by 3D spatially separated active sites. Nat Commun 2023; 14:5338. [PMID: 37660124 PMCID: PMC10475024 DOI: 10.1038/s41467-023-41002-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 08/10/2023] [Indexed: 09/04/2023] Open
Abstract
Cells possess isolated compartments that spatially confine different enzymes, enabling high-efficiency enzymatic cascade reactions. Herein, we report a cell-inspired design of biomimetic cascade catalysis system by immobilizing Fe single atoms and Au nanoparticles on the inner and outer layers of three-dimensional nanocapsules, respectively. The different metal sites catalyze independently and work synergistically to enable engineered and cascade glucose detection. The biomimetic catalysis system demonstrates ~ 9.8- and 2-fold cascade activity enhancement than conventional mixing and coplanar construction systems, respectively. Furthermore, the biomimetic catalysis system is successfully demonstrated for the colorimetric glucose detection with high catalytic activity and selectivity. Also, the proposed gel-based sensor is integrated with smartphone to enable real-time and visual determination of glucose. More importantly, the gel-based sensor exhibits a high correlation with a commercial glucometer in real samples detection. These findings provide a strategy to design an efficient biomimetic catalysis system for applications in bioassays and nanobiomedicines.
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Affiliation(s)
- Qiuping Wang
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China
- Hefei National Laboratory for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China
| | - Kui Chen
- Key Laboratory of Strongly Coupled Quantum Matter Physics, Chinese Academy of Sciences, School of Physical Sciences, University of Science and Technology of China, Hefei, 230026, China
| | - Hui Jiang
- Department of Cardiothoracic Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China
| | - Cai Chen
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China
| | - Can Xiong
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China
| | - Min Chen
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China
| | - Jie Xu
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, 325035, China
| | - Xiaoping Gao
- Hefei National Laboratory for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China.
| | - Suowen Xu
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China.
| | - Huang Zhou
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China.
| | - Yuen Wu
- Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230001, China.
- Hefei National Laboratory for Physical Sciences at the Microscale, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China.
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29
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Zhang Y, Jiang Y, Nafady A, Tang Z, Al-Enizi AM, Tan K, Ma S. Incorporation of Chiral Frustrated Lewis Pair into Metal-Organic Framework with Tailored Microenvironment for Heterogeneous Enantio- and Chemoselective Hydrogenation. ACS CENTRAL SCIENCE 2023; 9:1692-1701. [PMID: 37637733 PMCID: PMC10451035 DOI: 10.1021/acscentsci.3c00637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Indexed: 08/29/2023]
Abstract
The development of efficient heterogeneous catalysts with multiselectivity (e.g., enantio- and chemoselectivity) has long been sought after but with limited progress being made so far. To achieve enantio- and chemoselectivity in a heterogeneous system, as inspired by enzymes, we illustrate herein an approach of creating an enzyme-mimic region (EMR) within the nanospace of a metal-organic framework (MOF) as exemplified in the context of incorporating a chiral frustrated Lewis pair (CFLP) into a MOF with a tailored pore environment. Due to the high density of the EMR featuring the active site of CFLP and auxiliary sites of the hydroxyl group/open metal site within the vicinity of CFLP, the resultant EMR@MOF demonstrated excellent catalysis performance in heterogeneous hydrogenation of α,β-unsaturated imines to afford chiral β-unsaturated amines with high yields and high enantio- and chemoselectivity. The role of the hydroxyl group/open metal site in regulating chemoselectivity was proved by the observation of a catalyst-substrate interaction experimentally, which was also rationalized by computational results. This work not only contributes a MOF as a new platform for multiselective catalysis but also opens a promising avenue to develop heterogeneous catalysts with multiselectivity for challenging yet important transformations.
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Affiliation(s)
- Yin Zhang
- Department
of Chemistry, University of North Texas, Denton, Texas 76201, United States
| | - Yao Jiang
- School
of Chemistry and Chemical Engineering, Hefei
University of Technology, Hefei 230009, People’s Republic of China
| | - Ayman Nafady
- Department
of Chemistry, College of Science, King Saud
University, Riyadh 11451, Saudi Arabia
| | - Zhiyong Tang
- National
Center for Nanoscience and Nanotechnology, No. 11 ZhongGuanCun BeiYiTiao, 100190 Beijing, People’s Republic of China
| | - Abdullah M. Al-Enizi
- Department
of Chemistry, College of Science, King Saud
University, Riyadh 11451, Saudi Arabia
| | - Kui Tan
- Department
of Chemistry, University of North Texas, Denton, Texas 76201, United States
| | - Shengqian Ma
- Department
of Chemistry, University of North Texas, Denton, Texas 76201, United States
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30
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Liang Y, Qie Y, Yang J, Wu R, Cui S, Zhao Y, Anderson GJ, Nie G, Li S, Zhang C. Programming conformational cooperativity to regulate allosteric protein-oligonucleotide signal transduction. Nat Commun 2023; 14:4898. [PMID: 37580346 PMCID: PMC10425332 DOI: 10.1038/s41467-023-40589-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 08/03/2023] [Indexed: 08/16/2023] Open
Abstract
Conformational cooperativity is a universal molecular effect mechanism and plays a critical role in signaling pathways. However, it remains a challenge to develop artificial molecular networks regulated by conformational cooperativity, due to the difficulties in programming and controlling multiple structural interactions. Herein, we develop a cooperative strategy by programming multiple conformational signals, rather than chemical signals, to regulate protein-oligonucleotide signal transduction, taking advantage of the programmability of allosteric DNA constructs. We generate a cooperative regulation mechanism, by which increasing the loop lengths at two different structural modules induced the opposite effects manifesting as down- and up-regulation. We implement allosteric logic operations by using two different proteins. Further, in cell culture we demonstrate the feasibility of this strategy to cooperatively regulate gene expression of PLK1 to inhibit tumor cell proliferation, responding to orthogonal protein-signal stimulation. This programmable conformational cooperativity paradigm has potential applications in the related fields.
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Affiliation(s)
- Yuan Liang
- School of Computer Science, Key Lab of High Confidence Software Technologies, Peking University, 100871, Beijing, China
- School of Control and Computer Engineering, North China Electric Power University, 102206, Beijing, China
| | - Yunkai Qie
- CAS Key Laboratory for Biomedical Effects of Nanomaterials & Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
- GBA Research Innovation Institute for Nanotechnology, Guangzhou, 510530, China
- Department of Urology, Tianjin Institute of Urology, The Second Hospital of Tianjin Medical University, Tianjin, 300211, China
| | - Jing Yang
- School of Control and Computer Engineering, North China Electric Power University, 102206, Beijing, China
| | - Ranfeng Wu
- School of Computer Science, Key Lab of High Confidence Software Technologies, Peking University, 100871, Beijing, China
| | - Shuang Cui
- School of Computer Science, Key Lab of High Confidence Software Technologies, Peking University, 100871, Beijing, China
| | - Yuliang Zhao
- CAS Key Laboratory for Biomedical Effects of Nanomaterials & Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
- GBA Research Innovation Institute for Nanotechnology, Guangzhou, 510530, China
| | - Greg J Anderson
- QIMR Berghofer Medical Research Institute, Royal Brisbane Hospital, Herston, Queensland, 4029, Australia
| | - Guangjun Nie
- CAS Key Laboratory for Biomedical Effects of Nanomaterials & Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
- GBA Research Innovation Institute for Nanotechnology, Guangzhou, 510530, China
| | - Suping Li
- CAS Key Laboratory for Biomedical Effects of Nanomaterials & Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, China.
- University of Chinese Academy of Sciences, 100049, Beijing, China.
- GBA Research Innovation Institute for Nanotechnology, Guangzhou, 510530, China.
| | - Cheng Zhang
- School of Computer Science, Key Lab of High Confidence Software Technologies, Peking University, 100871, Beijing, China.
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31
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Wei D, Shi X, Junge H, Du C, Beller M. Carbon neutral hydrogen storage and release cycles based on dual-functional roles of formamides. Nat Commun 2023; 14:3726. [PMID: 37349304 DOI: 10.1038/s41467-023-39309-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 06/07/2023] [Indexed: 06/24/2023] Open
Abstract
The development of alternative clean energy carriers is a key challenge for our society. Carbon-based hydrogen storage materials are well-suited to undergo reversible (de)hydrogenation reactions and the development of catalysts for the individual process steps is crucial. In the current state, noble metal-based catalysts still dominate this field. Here, a system for partially reversible and carbon-neutral hydrogen storage and release is reported. It is based on the dual-functional roles of formamides and uses a small molecule Fe-pincer complex as the catalyst, showing good stability and reusability with high productivity. Starting from formamides, quantitative production of CO-free hydrogen is achieved at high selectivity ( > 99.9%). This system works at modest temperatures of 90 °C, which can be easily supplied by the waste heat from e.g., proton-exchange membrane fuel cells. Employing such system, we achieve >70% H2 evolution efficiency and >99% H2 selectivity in 10 charge-discharge cycles, avoiding undesired carbon emission between cycles.
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Affiliation(s)
- Duo Wei
- School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150001, P. R. China
- Leibniz-Institut für Katalyse e.V, 18059, Rostock, Germany
| | - Xinzhe Shi
- School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150001, P. R. China
- Leibniz-Institut für Katalyse e.V, 18059, Rostock, Germany
| | - Henrik Junge
- Leibniz-Institut für Katalyse e.V, 18059, Rostock, Germany.
| | - Chunyu Du
- School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150001, P. R. China.
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32
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Zheng X, Drummer MC, He H, Rayder TM, Niklas J, Weingartz NP, Bolotin IL, Singh V, Kramar BV, Chen LX, Hupp JT, Poluektov OG, Farha OK, Zapol P, Glusac KD. Photoreactive Carbon Dioxide Capture by a Zirconium-Nanographene Metal-Organic Framework. J Phys Chem Lett 2023; 14:4334-4341. [PMID: 37133894 DOI: 10.1021/acs.jpclett.3c00049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
The mechanism of photochemical CO2 reduction to formate by PCN-136, a Zr-based metal-organic framework (MOF) that incorporates light-harvesting nanographene ligands, has been investigated using steady-state and time-resolved spectroscopy and density functional theory (DFT) calculations. The catalysis was found to proceed via a "photoreactive capture" mechanism, where Zr-based nodes serve to capture CO2 in the form of Zr-bicarbonates, while the nanographene ligands have a dual role of absorbing light and storing one-electron equivalents for catalysis. We also find that the process occurs via a "two-for-one" route, where a single photon initiates a cascade of electron/hydrogen atom transfers from the sacrificial donor to the CO2-bound MOF. The mechanistic findings obtained here illustrate several advantages of MOF-based architectures in molecular photocatalyst engineering and provide insights on ways to achieve high formate selectivity.
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Affiliation(s)
- Xin Zheng
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, United States
| | - Matthew C Drummer
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, United States
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Haiying He
- Department of Physics and Astronomy, Valparaiso University, Valparaiso, Indiana 46383, United States
| | - Thomas M Rayder
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Jens Niklas
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Nicholas P Weingartz
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Igor L Bolotin
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, United States
| | - Varun Singh
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, United States
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Boris V Kramar
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Lin X Chen
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Joseph T Hupp
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Oleg G Poluektov
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Omar K Farha
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Peter Zapol
- Materials Science Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Ksenija D Glusac
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, United States
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
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33
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Afewerki S, Edlund U. Combined Catalysis: A Powerful Strategy for Engineering Multifunctional Sustainable Lignin-Based Materials. ACS NANO 2023; 17:7093-7108. [PMID: 37014848 PMCID: PMC10134738 DOI: 10.1021/acsnano.3c00436] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Accepted: 03/31/2023] [Indexed: 06/19/2023]
Abstract
The production and engineering of sustainable materials through green chemistry will have a major role in our mission of transitioning to a more sustainable society. Here, combined catalysis, which is the integration of two or more catalytic cycles or activation modes, provides innovative chemical reactions and material properties efficiently, whereas the single catalytic cycle or activation mode alone fails in promoting a successful reaction. Polyphenolic lignin with its distinctive structural functions acts as an important template to create materials with versatile properties, such as being tough, antimicrobial, self-healing, adhesive, and environmentally adaptable. Sustainable lignin-based materials are generated by merging the catalytic cycle of the quinone-catechol redox reaction with free radical polymerization or oxidative decarboxylation reaction, which explores a wide range of metallic nanoparticles and metal ions as the catalysts. In this review, we present the recent work on engineering lignin-based multifunctional materials devised through combined catalysis. Despite the fruitful employment of this concept to material design and the fact that engineering has provided multifaceted materials able to solve a broad spectrum of challenges, we envision further exploration and expansion of this important concept in material science beyond the catalytic processes mentioned above. This could be accomplished by taking inspiration from organic synthesis where this concept has been successfully developed and implemented.
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Affiliation(s)
- Samson Afewerki
- Fibre
and Polymer Technology, KTH Royal Institute
of Technology, SE 100 44 Stockholm, Sweden
| | - Ulrica Edlund
- Fibre
and Polymer Technology, KTH Royal Institute
of Technology, SE 100 44 Stockholm, Sweden
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34
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Eickhoff L, Kramer P, Bresien J, Michalik D, Villinger A, Schulz A. On the Dynamic Behavior of Pacman Phosphanes─A Case of Cooperativity and Redox Isomerism. Inorg Chem 2023; 62:6768-6778. [PMID: 37068163 DOI: 10.1021/acs.inorgchem.3c00481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/19/2023]
Abstract
In solution, the Pacman chlorophosphane (2Cl) shows fast exchange of the endo/exo-orientation of the two P-Cl bonds in the molecule featuring cooperativity. Experimental and quantum mechanical investigations of the inversion on the phosphorus(III) centers reveal a crucial role of chloride ions in the dynamic process. To confirm the results, the homologous Pacman halogen-phosphanes 2X were prepared by halogen exchange reactions (X = F, Br, and I). Besides accelerated dynamic behavior for the heavier analogues, significant differences in the molecular structure are caused by the halogen exchange reactions, including the formation of an endo-endo substituted Pacman fluorophosphane as well as dicationic species by phosphorus halogen bond dissociation. The latter process can be regarded as redox isomerism since two PIII atoms in 2X become PV centers in the dications.
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Affiliation(s)
- Liesa Eickhoff
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
| | - Pascal Kramer
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
| | - Jonas Bresien
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
| | - Dirk Michalik
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
- Leibniz-Institut für Katalyse e.V., Albert-Einstein-Straße 29a, D-18059 Rostock, Germany
| | - Alexander Villinger
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
| | - Axel Schulz
- Institut für Chemie, Universität Rostock, Albert-Einstein-Straße 3a, D-18059 Rostock, Germany
- Leibniz-Institut für Katalyse e.V., Albert-Einstein-Straße 29a, D-18059 Rostock, Germany
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35
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Liu W, Liu J, Liu X, Zheng H, Liu J. Bioinspired Hydrophobic Single-Atom Catalyst with Flexible Sulfur Motif for Aqueous-Phase Hydrogenative Transformation. ACS Catal 2022. [DOI: 10.1021/acscatal.2c05862] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Wengang Liu
- College of Material Science and Engineering, Qingdao University of Science and Technology, Qingdao 266042, P. R. China
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Shandong Energy Institute, Qingdao 266101, P. R. China
| | - Jiachang Liu
- College of Material Science and Engineering, Qingdao University of Science and Technology, Qingdao 266042, P. R. China
| | - Xilu Liu
- College of Material Science and Engineering, Qingdao University of Science and Technology, Qingdao 266042, P. R. China
| | - Haonan Zheng
- College of Material Science and Engineering, Qingdao University of Science and Technology, Qingdao 266042, P. R. China
| | - Jian Liu
- College of Material Science and Engineering, Qingdao University of Science and Technology, Qingdao 266042, P. R. China
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Shandong Energy Institute, Qingdao 266101, P. R. China
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36
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Lipase and Its Unique Selectivity: A Mini-Review. J CHEM-NY 2022. [DOI: 10.1155/2022/7609019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Contrary to other solid catalysts, enzymes facilitate more sophisticated chemical reactions because most enzymes specifically interact with substrates and release selective products. Lipases (triacylglycerol hydrolase, EC 3.1.1.3), which can catalyze the cleavage and formation of various acyl compounds, are one of the best examples of enzymes with a unique substrate selectivity. There are already several commercialized lipases that have become important tools for various lipid-related studies, although there is still a need to discover novel lipases with unique substrate selectivity to facilitate more innovative reactions in human applications such as household care, cosmetics, foods, and pharmaceuticals. In this mini-review, we focus on concisely demonstrating not only the general information of lipases but also their substate selectivities: typoselectivity, regioselectivity, and stereoselectivity. We highlight the essential studies on selective lipases in terms of enzymology. Furthermore, we introduce several examples of analysis methodology and experimental requirements to determine each selectivity of lipases. This work would stress the importance of integrating our understanding of lipase chemistry to make further advances in the relevant fields.
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37
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Hollingsworth WM, Hill EA. Exploring the potential role of heavy pnictogen elements in ligand design for new metal-ligand cooperative chemistry. J COORD CHEM 2022. [DOI: 10.1080/00958972.2022.2124863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- W. M. Hollingsworth
- Department of Chemistry and Biochemistry, Auburn University, Auburn, AL, USA
| | - E. A. Hill
- Department of Chemistry and Biochemistry, Auburn University, Auburn, AL, USA
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38
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Huang J, Qiu X, Zhao Z, Zhu H, Liu Y, Shi W, Liao P, Chen X. Single‐Product Faradaic Efficiency for Electrocatalytic of CO
2
to CO at Current Density Larger than 1.2 A cm
−2
in Neutral Aqueous Solution by a Single‐Atom Nanozyme. Angew Chem Int Ed Engl 2022; 61:e202210985. [DOI: 10.1002/anie.202210985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Indexed: 11/08/2022]
Affiliation(s)
- Jia‐Run Huang
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Xiao‐Feng Qiu
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Zhen‐Hua Zhao
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Hao‐Lin Zhu
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Yan‐Chen Liu
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Wen Shi
- School of Chemistry Sun Yat-Sen University Guangzhou 510275 China
| | - Pei‐Qin Liao
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
| | - Xiao‐Ming Chen
- MOE Key Laboratory of Bioinorganic and Synthetic Chemistry School of Chemistry Sun Yat-sen University Guangzhou 510275 China
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39
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Huang JR, Qiu XF, Zhao ZH, Zhu HL, Liu YC, Shi W, Liao PQ, Chen XM. Single‐Product Faradaic Efficiency for Electrocatalytic of CO2 to CO at Current Density Larger than 1.2 A cm−2 in Neutral Aqueous Solution by a Single‐Atom Nanozyme. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202210985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | | | | | - Hao-Lin Zhu
- Sun Yat-Sen University School of Chemistry CHINA
| | - Yan-Chen Liu
- Sun Yat-Sen University School of Chemistry CHINA
| | - Wen Shi
- Sun Yat-Sen University School of Chemistry CHINA
| | - Pei-Qin Liao
- Sun Yat-Sen University School of Chemistry No. 135, Xingang Xi Road 510275 Guangzhou CHINA
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40
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Cai Y, Jiang S, Rajeshkumar T, Maron L, Xu X. A Planar Nickelaspiropentane Complex with Magnesium-Based Metalloligands: Synthesis, Structure, and Synergistic Dihydrogen Activation. J Am Chem Soc 2022; 144:16647-16655. [PMID: 36041123 DOI: 10.1021/jacs.2c07402] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The nature of transition-metal-olefin bonding has been explained by the Dewar-Chatt-Duncanson model within a continuum of two extremes, namely, a π-complex and a metallacyclopropane. The textbook rule suggests that a low-spin late-transition-metal-ethylene complex more likely forms a π-complex rather than a metallacyclopropane. Herein, we report a low-spin late-transition-metal-bis-ethylene complex forming an unprecedented planar metalla-bis-cyclopropane structure with magnesium-based metalloligands. Treatment of LMgEt (L = [(DippNCMe)2CH]-, Dipp = 2,6-iPr2C6H3) with Ni(cod)2 (cod = 1,5-cyclooctadiene) formed the heterotrimetallic complex (LMg)2Ni(C2H4)2, which features a linear Mg-Ni-Mg linkage and a planar coordination geometry at the nickel center. Both structural features and computational studies strongly supported the Ni(C2H4)2 moiety as a nickelaspiropentane. The exposure of (LMg)2Ni(C2H4)2 to 1 bar H2 at room temperature produced a four-hydride-bridged complex (LMg)2Ni(μ-H)4. The profile of H2 activation was elucidated by density functional theory calculations, which indicated a novel Mg/Ni cooperative activation mechanism with no oxidation occurring at the metal center, differing from the prevailing mono-metal-based redox mechanism. Moreover, the heterotrimetallic complex (LMg)2Ni(C2H4)2 catalyzed the hydrogenation of a wide range of unsaturated substrates under mild conditions.
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Affiliation(s)
- Yanping Cai
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou215123, P. R. China
| | - Shengjie Jiang
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou215123, P. R. China
| | - Thayalan Rajeshkumar
- LPCNO, CNRS & INSA, Université Paul Sabatier, 135 Avenue de Rangueil, 31077Toulouse, France
| | - Laurent Maron
- LPCNO, CNRS & INSA, Université Paul Sabatier, 135 Avenue de Rangueil, 31077Toulouse, France
| | - Xin Xu
- Key Laboratory of Organic Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou215123, P. R. China
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41
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van Beek CB, van Leest NP, Lutz M, de Vos SD, Klein Gebbink RJM, de Bruin B, Broere DLJ. Combining metal-metal cooperativity, metal-ligand cooperativity and chemical non-innocence in diiron carbonyl complexes. Chem Sci 2022; 13:2094-2104. [PMID: 35308864 PMCID: PMC8849050 DOI: 10.1039/d1sc05473b] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Accepted: 01/11/2022] [Indexed: 02/06/2023] Open
Abstract
Several metalloenzymes, including [FeFe]-hydrogenase, employ cofactors wherein multiple metal atoms work together with surrounding ligands that mediate heterolytic and concerted proton-electron transfer (CPET) bond activation steps. Herein, we report a new dinucleating PNNP expanded pincer ligand, which can bind two low-valent iron atoms in close proximity to enable metal-metal cooperativity (MMC). In addition, reversible partial dearomatization of the ligand's naphthyridine core enables both heterolytic metal-ligand cooperativity (MLC) and chemical non-innocence through CPET steps. Thermochemical and computational studies show how a change in ligand binding mode can lower the bond dissociation free energy of ligand C(sp3)-H bonds by ∼25 kcal mol-1. H-atom abstraction enabled trapping of an unstable intermediate, which undergoes facile loss of two carbonyl ligands to form an unusual paramagnetic (S = ) complex containing a mixed-valent iron(0)-iron(i) core bound within a partially dearomatized PNNP ligand. Finally, cyclic voltammetry experiments showed that these diiron complexes show catalytic activity for the electrochemical hydrogen evolution reaction. This work presents the first example of a ligand system that enables MMC, heterolytic MLC and chemical non-innocence, thereby providing important insights and opportunities for the development of bimetallic systems that exploit these features to enable new (catalytic) reactivity.
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Affiliation(s)
- Cody B van Beek
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
| | - Nicolaas P van Leest
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, Van 't Hoff Institute for Molecular Sciences, University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
| | - Martin Lutz
- Structural Biochemistry, Bijvoet Centre for Biomolecular Research, Faculty of Science, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
| | - Sander D de Vos
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
| | - Robertus J M Klein Gebbink
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
| | - Bas de Bruin
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, Van 't Hoff Institute for Molecular Sciences, University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
| | - Daniël L J Broere
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
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42
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Kim J. Metal complexes containing
silicon‐based
pincer ligands: Reactivity and application in small molecule activation. B KOREAN CHEM SOC 2022. [DOI: 10.1002/bkcs.12491] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Jin Kim
- Department of Chemistry Sunchon National University Suncheon Jeollanam‐do Republic of Korea
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43
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Green LPM, Steel TR, Riisom M, Hanif M, Söhnel T, Jamieson SMF, Wright LJ, Crowley JD, Hartinger CG. Synthetic Strategy Towards Heterodimetallic Half-Sandwich Complexes Based on a Symmetric Ditopic Ligand. Front Chem 2021; 9:786367. [PMID: 34926406 PMCID: PMC8677676 DOI: 10.3389/fchem.2021.786367] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 11/02/2021] [Indexed: 11/18/2022] Open
Abstract
Multimetallic complexes have been shown in several examples to possess greater anticancer activity than their monometallic counterparts. The increased activity has been attributed to altered modes of action. We herein report the synthesis of a series of heterodimetallic compounds based on a ditopic ligand featuring 2-pyridylimine chelating motifs and organometallic half-sandwich moieties. The complexes were characterized by a combination of 1H NMR spectroscopy, electrospray ionization mass spectrometry, elemental analysis and single crystal X-ray diffraction. Investigations into the stability of representative complexes in DMSO-d6 and 10% DMSO-d6/D2O revealed the occurrence of solvent-chlorido ligand exchange. Proliferation assays in four human cancer cell lines showed that the Os-Rh complex possessed minimal activity, while all other complexes were inactive.
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Affiliation(s)
- Lewis P M Green
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Tasha R Steel
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Mie Riisom
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand.,Auckland Cancer Society Research Centre, University of Auckland, Auckland, New Zealand
| | - Muhammad Hanif
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Tilo Söhnel
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Stephen M F Jamieson
- Auckland Cancer Society Research Centre, University of Auckland, Auckland, New Zealand
| | - L James Wright
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - James D Crowley
- Department of Chemistry, University of Otago, Dunedin, New Zealand
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44
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Sánchez P, Goel B, Neugebauer H, Lalancette RA, Grimme S, Hansen A, Prokopchuk DE. Ligand Protonation at Carbon, not Nitrogen, during H 2 Production with Amine-Rich Iron Electrocatalysts. Inorg Chem 2021; 60:17407-17413. [PMID: 34735115 DOI: 10.1021/acs.inorgchem.1c03142] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
We present monometallic H2 production electrocatalysts containing electron-rich triamine-cyclopentadienyl (Cp) ligands coordinated to iron. After selective CO extrusion from the iron tricarbonyl precursors, electrocatalysis is observed via cyclic voltammetry in the presence of an exogenous acid. Contrary to the fact that amines in the secondary coordination sphere are often protonated during electrocatalysis, comprehensive quantum-chemical calculations indicate that the amines likely do not function as proton relays; instead, endo-Cp ring protonation is most favorable after 1e- reduction. This unusual mechanistic pathway emphasizes the need to consider a broad domain of H+/e- addition products by synergistically combining experimental and theoretical resources.
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Affiliation(s)
- Práxedes Sánchez
- Department of Chemistry, Rutgers University─Newark, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Bhumika Goel
- Department of Chemistry, Rutgers University─Newark, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Hagen Neugebauer
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms Universität Bonn, Beringstraße 4, Bonn 53115, Germany
| | - Roger A Lalancette
- Department of Chemistry, Rutgers University─Newark, 73 Warren Street, Newark, New Jersey 07102, United States
| | - Stefan Grimme
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms Universität Bonn, Beringstraße 4, Bonn 53115, Germany
| | - Andreas Hansen
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms Universität Bonn, Beringstraße 4, Bonn 53115, Germany
| | - Demyan E Prokopchuk
- Department of Chemistry, Rutgers University─Newark, 73 Warren Street, Newark, New Jersey 07102, United States
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45
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Ruppert H, Sigmund LM, Greb L. Calix[4]pyrroles as ligands: recent progress with a focus on the emerging p-block element chemistry. Chem Commun (Camb) 2021; 57:11751-11763. [PMID: 34661225 DOI: 10.1039/d1cc05120b] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Calix[4]pyrroles are readily synthesized in one step from pyrroles and ketones. For several decades, these macrocycles have been exploited as powerful anion receptors or ligands for transition and rare-earth metals. In contrast, calix[4]pyrrolates as ligands for p-block elements were established only in 2018. The present feature article reviews these developments, together with the recent progress on s-, d-, and f-block element complexes of the calix[4]pyrroles. Particular focus is given on the calix[4]pyrrolato aluminate and the corresponding silane, both featuring square planar-coordinated p-block elements in their highest oxidation states. These unique "anti-van't-Hoff-Le-Bel" structures introduce valuable characteristics into main-group element chemistry, such as agostic interactions or ligand-to-metal charge transfer absorptions. The most vital reactivities are highlighted, which rely on properties ranging from amphoterism, redox-activity, and a small HOMO-LUMO gap up to the ability to provide a platform for additional external stimuli. Overall, these developments underscore the beneficial impact of structural constraint of p-block elements and element-ligand cooperativity to enhance the functionality of the most abundant elements in their native oxidation states.
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Affiliation(s)
- Heiko Ruppert
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120 Heidelberg, Germany.
| | - Lukas M Sigmund
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120 Heidelberg, Germany.
| | - Lutz Greb
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120 Heidelberg, Germany.
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46
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Sen A, Chikkali SH. C 1-Symmetric diphosphorus ligands in metal-catalyzed asymmetric hydrogenation to prepare chiral compounds. Org Biomol Chem 2021; 19:9095-9137. [PMID: 34617539 DOI: 10.1039/d1ob01207j] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Asymmetric hydrogenation has remained an important and challenging research area in industry as well as academia due to its high atom economy and ability to induce chirality. Among several types of ligands, chiral bidentate phosphine ligands have played a pivotal role in developing asymmetric hydrogenation. Although C2-symmetric chiral bidentate phosphine ligands have dominated the field, it has been found that several C1-symmetric ligands are equally effective and, in many cases, have outperformed their C2-symmetric counterparts. This review evaluates the possibility of the use of C1-symmetric diphosphorus ligands in asymmetric hydrogenation to produce chiral compounds. The recent strategies and advances in the application of C1-symmetric diphosphorus ligands in the metal-catalyzed asymmetric hydrogenation of a variety of CC bonds have been summarized. The potential of diphosphorus ligands in asymmetric hydrogenation to produce pharmaceutical intermediates, bioactive molecules, drug molecules, agrochemicals, and fragrances is discussed. Although asymmetric hydrogenation appears to be a problem that has been resolved, a deep dive into the recent literature reveals that there are several challenges that are yet to be addressed. The current asymmetric hydrogenation methods mostly employ precious metals, which are depleting at a fast pace. Therefore, scientific interventions to perform asymmetric hydrogenation using base metals or earth-abundant metals that can compete with established precious metals hold significant potential.
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Affiliation(s)
- Anirban Sen
- Polyolefin Lab, Polymer Science and Engineering Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pune 411008, India. .,Academy of Scientific and Innovative Research (AcSIR), Sector 19, Kamla Nehru Nagar, Ghaziabad 201002, U. P., India
| | - Samir H Chikkali
- Polyolefin Lab, Polymer Science and Engineering Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pune 411008, India. .,Academy of Scientific and Innovative Research (AcSIR), Sector 19, Kamla Nehru Nagar, Ghaziabad 201002, U. P., India
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47
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Luo J, Kar S, Rauch M, Montag M, Ben-David Y, Milstein D. Efficient Base-Free Aqueous Reforming of Methanol Homogeneously Catalyzed by Ruthenium Exhibiting a Remarkable Acceleration by Added Catalytic Thiol. J Am Chem Soc 2021; 143:17284-17291. [PMID: 34617436 PMCID: PMC8532156 DOI: 10.1021/jacs.1c09007] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Indexed: 12/11/2022]
Abstract
Production of H2 by methanol reforming is of particular interest due the low cost, ready availability, and high hydrogen content of methanol. However, most current methods either require very high temperatures and pressures or strongly rely on the utilization of large amounts of base. Here we report an efficient, base-free aqueous-phase reforming of methanol homogeneously catalyzed by an acridine-based ruthenium pincer complex, the activity of which was unexpectedly improved by a catalytic amount of a thiol additive. The reactivity of this system is enhanced by nearly 2 orders of magnitude upon addition of the thiol, and it can maintain activity for over 3 weeks, achieving a total H2 turnover number of over 130 000. On the basis of both experimental and computational studies, a mechanism is proposed which involves outer-sphere dehydrogenations promoted by a unique ruthenium complex with thiolate as an assisting ligand. The current system overcomes the need for added base in homogeneous methanol reforming and also highlights the unprecedented acceleration of catalytic activity of metal complexes achieved by the addition of a catalytic amount of thiol.
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Affiliation(s)
- Jie Luo
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
| | - Sayan Kar
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
| | - Michael Rauch
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
| | - Michael Montag
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
| | - Yehoshoa Ben-David
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
| | - David Milstein
- Department of Molecular Chemistry
and Materials Science, Weizmann Institute
of Science, Rehovot, 76100, Israel
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48
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Trincado M, Bösken J, Grützmacher H. Homogeneously catalyzed acceptorless dehydrogenation of alcohols: A progress report. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.213967] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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49
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Sigmund LM, Ehlert C, Enders M, Graf J, Gryn'ova G, Greb L. Disauerstoffaktivierung und Pyrrol‐α‐Spaltung mit Calix[4]pyrrolatoaluminaten: Enzymmodell durch strukturellen Zwang. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202104916] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Lukas Maximilian Sigmund
- Anorganisch-Chemisches Institut Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 270 69120 Heidelberg Deutschland
| | - Christopher Ehlert
- Heidelberger Institut für Theoretische Studien (HITS gGmbH) Schloss-Wolfsbrunnenweg 35 69118 Heidelberg Deutschland
- Interdisziplinäres Zentrum für wissenschaftliches Rechnen (IWR) Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 205 69120 Heidelberg Deutschland
| | - Markus Enders
- Anorganisch-Chemisches Institut Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 270 69120 Heidelberg Deutschland
| | - Jürgen Graf
- Organisch-Chemisches Institut Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 270 69120 Heidelberg Deutschland
| | - Ganna Gryn'ova
- Heidelberger Institut für Theoretische Studien (HITS gGmbH) Schloss-Wolfsbrunnenweg 35 69118 Heidelberg Deutschland
- Interdisziplinäres Zentrum für wissenschaftliches Rechnen (IWR) Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 205 69120 Heidelberg Deutschland
| | - Lutz Greb
- Anorganisch-Chemisches Institut Ruprecht-Karls-Universität Heidelberg Im Neuenheimer Feld 270 69120 Heidelberg Deutschland
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50
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Sigmund LM, Ehlert C, Enders M, Graf J, Gryn'ova G, Greb L. Dioxygen Activation and Pyrrole α-Cleavage with Calix[4]pyrrolato Aluminates: Enzyme Model by Structural Constraint. Angew Chem Int Ed Engl 2021; 60:15632-15640. [PMID: 33955154 PMCID: PMC8362023 DOI: 10.1002/anie.202104916] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Indexed: 01/30/2023]
Abstract
The present work describes the reaction of triplet dioxygen with the porphyrinogenic calix[4]pyrrolato aluminates to alkylperoxido aluminates in high selectivity. Multiconfigurational quantum chemical computations disclose the mechanism for this spin‐forbidden process. Despite a negligible spin–orbit coupling constant, the intersystem crossing (ISC) is facilitated by singlet and triplet state degeneracy and spin–vibronic coupling. The formed peroxides are stable toward external substrates but undergo an unprecedented oxidative pyrrole α‐cleavage by ligand aromatization/dearomatization‐initiated O−O σ‐bond scission. A detailed comparison of the calix[4]pyrrolato aluminates with dioxygen‐related enzymology provides insights into the ISC of metal‐ or cofactor‐free enzymes. It substantiates the importance of structural constraint and element–ligand cooperativity for the functions of aerobic life.
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Affiliation(s)
- Lukas Maximilian Sigmund
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Christopher Ehlert
- Heidelberg Institute for Theoretical Studies (HITS gGmbH), Schloss-Wolfsbrunnenweg 35, 69118, Heidelberg, Germany.,Interdisciplinary Center for Scientific Computing (IWR), Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 205, 69120, Heidelberg, Germany
| | - Markus Enders
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Jürgen Graf
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Ganna Gryn'ova
- Heidelberg Institute for Theoretical Studies (HITS gGmbH), Schloss-Wolfsbrunnenweg 35, 69118, Heidelberg, Germany.,Interdisciplinary Center for Scientific Computing (IWR), Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 205, 69120, Heidelberg, Germany
| | - Lutz Greb
- Anorganisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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