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Sadeghi A, Hajati F, Rezaee A, Sadeghi M, Argha A, Alinejad-Rokny H. 3DECG-Net: ECG fusion network for multi-label cardiac arrhythmia detection. Comput Biol Med 2024; 182:109126. [PMID: 39255656 DOI: 10.1016/j.compbiomed.2024.109126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Revised: 09/04/2024] [Accepted: 09/05/2024] [Indexed: 09/12/2024]
Abstract
Cardiovascular diseases represent the leading global cause of death, typically diagnosed and addressed through electrocardiograms (ECG), which record the heart's electrical activity. In recent years, there has been a notable surge in ECG recordings, driven by the widespread use of wearable devices. However, the limited availability of medical experts to analyze these recordings underscores the necessity for automated ECG analysis using computer-aided methods. In this study, we introduced 3DECG-Net, a deep learning model designed to detect and classify seven distinct heart states through the analysis of data fusion from 12-lead ECG in a multi-label framework. Our model leverages a residual architecture with a multi-head attention mechanism, undergoing training within a five-fold cross-validation scheme. By transforming 12-lead ECG signals into 3D data with the help of Recurrent Plot technique, 3DECG-Net achieves a noteworthy micro F1-score of 80.3 %, surpassing the performance of other state-of-the-art deep learning models developed for this specific task. Also, we present an ECG preprocessing framework to generate compact, high-quality ECG signals for potential application in future studies within this domain. We conduct an explainable AI experiment using Local Interpretable Model-agnostic Explanations (LIME) to elucidate the significance of each lead in accurately diagnosing specific arrhythmias, ensuring the logical processing of ECG data by 3DECG-Net. The findings of this study suggest that the proposed model is trustworthy and has the potential to be used as an effective diagnostic toolset for identifying heart arrhythmias. Its effectiveness can improve the diagnostic process, facilitate early treatment, and enhance overall efficiency in medical settings.
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Affiliation(s)
- Alireza Sadeghi
- Department of Mechatronics, School of Intelligent Systems, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran
| | - Farshid Hajati
- School of Science and Technology, Faculty of Science, Agriculture, Business and Law, University of New England, Armidale, NSW, 2350, Australia.
| | - Alireza Rezaee
- Department of Mechatronics, School of Intelligent Systems, College of Interdisciplinary Science and Technology, University of Tehran, Tehran, Iran
| | - Mahdieh Sadeghi
- Student Research Committee, Mazandaran University of Medical Sciences, Sari, Iran
| | - Ahmadreza Argha
- School of Biomedical Engineering, UNSW Sydney, Randwick, NSW, 2052, Australia
| | - Hamid Alinejad-Rokny
- BioMedical Machine Learning Lab, School of Biomedical Engineering, UNSW Sydney, Randwick, NSW 2052, Australia
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2
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Sharmin R, Brindise MC, Kolliyil JJ, Meyers BA, Zhang J, Vlachos PP. Novel interpretable Feature set extraction and classification for accurate atrial fibrillation detection from ECGs. Comput Biol Med 2024; 179:108872. [PMID: 39013342 DOI: 10.1016/j.compbiomed.2024.108872] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 06/18/2024] [Accepted: 07/08/2024] [Indexed: 07/18/2024]
Abstract
OBJECTIVE We present a novel method for detecting atrial fibrillation (AFib) by analyzing Lead II electrocardiograms (ECGs) using a unique set of features. METHODS For this purpose, we used specific signal processing techniques, such as proper orthogonal decomposition, continuous wavelet transforms, discrete cosine transform, and standard cross-correlation, to extract 48 features from the ECGs. Thus, our approach aims to more effectively capture AFib signatures, such as beat-to-beat variability and fibrillatory waves, than traditional metrics. Moreover, our features were designed to be physiologically interpretable. Subsequently, we incorporated an XGBoost-based ECG classifier to train and evaluate it using the publicly available 'Training' dataset of the 2017 PhysioNet Challenge, which includes 'Normal,' 'AFib,' 'Other,' and 'Noisy' ECG categories. RESULTS Our method achieved an accuracy of 96 % and an F1-score of 0.83 for 'AFib' detection and 80 % accuracy and 0.85 F1-score for 'Normal' ECGs. Finally, we compared our method's performance with the top-classifiers from the 2017 PhysioNet Challenge, namely ENCASE, Random Forest, and Cascaded Binary. As reported by Clifford et al., 2017, these three best performing models scored 0.80, 0.83, 0.82, in terms of F1-score for 'AFib' detection, respectively. CONCLUSION Despite using significantly fewer features than the competition's state-of-the-art ECG detection algorithms (48 vs. 150-622), our model achieved a comparable F1-score of 0.83 for successful 'AFib' detection. SIGNIFICANCE The interpretable features specifically designed for 'AFib' detection results in our method's adaptability in clinical settings for real-time arrhythmia detection and is even effective with short ECGs (<10 heartbeats).
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Affiliation(s)
- Ruhi Sharmin
- Department of Biomedical Engineering, Purdue University, USA
| | - Melissa C Brindise
- Department of Mechanical Engineering, Pennsylvania State University, USA
| | - Jibin Joy Kolliyil
- Department of Mechanical Engineering, Pennsylvania State University, USA
| | - Brett A Meyers
- Department of Mechanical Engineering, Purdue University, USA
| | - Jiacheng Zhang
- Department of Mechanical Engineering, Purdue University, USA
| | - Pavlos P Vlachos
- Department of Biomedical Engineering, Purdue University, USA; Department of Mechanical Engineering, Purdue University, USA.
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3
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Ansari Y, Mourad O, Qaraqe K, Serpedin E. Deep learning for ECG Arrhythmia detection and classification: an overview of progress for period 2017-2023. Front Physiol 2023; 14:1246746. [PMID: 37791347 PMCID: PMC10542398 DOI: 10.3389/fphys.2023.1246746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Accepted: 08/28/2023] [Indexed: 10/05/2023] Open
Abstract
Cardiovascular diseases are a leading cause of mortality globally. Electrocardiography (ECG) still represents the benchmark approach for identifying cardiac irregularities. Automatic detection of abnormalities from the ECG can aid in the early detection, diagnosis, and prevention of cardiovascular diseases. Deep Learning (DL) architectures have been successfully employed for arrhythmia detection and classification and offered superior performance to traditional shallow Machine Learning (ML) approaches. This survey categorizes and compares the DL architectures used in ECG arrhythmia detection from 2017-2023 that have exhibited superior performance. Different DL models such as Convolutional Neural Networks (CNNs), Multilayer Perceptrons (MLPs), Transformers, and Recurrent Neural Networks (RNNs) are reviewed, and a summary of their effectiveness is provided. This survey provides a comprehensive roadmap to expedite the acclimation process for emerging researchers willing to develop efficient algorithms for detecting ECG anomalies using DL models. Our tailored guidelines bridge the knowledge gap allowing newcomers to align smoothly with the prevailing research trends in ECG arrhythmia detection. We shed light on potential areas for future research and refinement in model development and optimization, intending to stimulate advancement in ECG arrhythmia detection and classification.
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Affiliation(s)
- Yaqoob Ansari
- ECEN Program, Texas A&M University at Qatar, Doha, Qatar
| | | | - Khalid Qaraqe
- ECEN Program, Texas A&M University at Qatar, Doha, Qatar
| | - Erchin Serpedin
- ECEN Department, Texas A&M University, College Station, TX, United States
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4
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Iqbal J, Cortés Jaimes DC, Makineni P, Subramani S, Hemaida S, Thugu TR, Butt AN, Sikto JT, Kaur P, Lak MA, Augustine M, Shahzad R, Arain M. Reimagining Healthcare: Unleashing the Power of Artificial Intelligence in Medicine. Cureus 2023; 15:e44658. [PMID: 37799217 PMCID: PMC10549955 DOI: 10.7759/cureus.44658] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/04/2023] [Indexed: 10/07/2023] Open
Abstract
Artificial intelligence (AI) has opened new medical avenues and revolutionized diagnostic and therapeutic practices, allowing healthcare providers to overcome significant challenges associated with cost, disease management, accessibility, and treatment optimization. Prominent AI technologies such as machine learning (ML) and deep learning (DL) have immensely influenced diagnostics, patient monitoring, novel pharmaceutical discoveries, drug development, and telemedicine. Significant innovations and improvements in disease identification and early intervention have been made using AI-generated algorithms for clinical decision support systems and disease prediction models. AI has remarkably impacted clinical drug trials by amplifying research into drug efficacy, adverse events, and candidate molecular design. AI's precision and analysis regarding patients' genetic, environmental, and lifestyle factors have led to individualized treatment strategies. During the COVID-19 pandemic, AI-assisted telemedicine set a precedent for remote healthcare delivery and patient follow-up. Moreover, AI-generated applications and wearable devices have allowed ambulatory monitoring of vital signs. However, apart from being immensely transformative, AI's contribution to healthcare is subject to ethical and regulatory concerns. AI-backed data protection and algorithm transparency should be strictly adherent to ethical principles. Vigorous governance frameworks should be in place before incorporating AI in mental health interventions through AI-operated chatbots, medical education enhancements, and virtual reality-based training. The role of AI in medical decision-making has certain limitations, necessitating the importance of hands-on experience. Therefore, reaching an optimal balance between AI's capabilities and ethical considerations to ensure impartial and neutral performance in healthcare applications is crucial. This narrative review focuses on AI's impact on healthcare and the importance of ethical and balanced incorporation to make use of its full potential.
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Affiliation(s)
| | - Diana Carolina Cortés Jaimes
- Epidemiology, Universidad Autónoma de Bucaramanga, Bucaramanga, COL
- Medicine, Pontificia Universidad Javeriana, Bogotá, COL
| | - Pallavi Makineni
- Medicine, All India Institute of Medical Sciences, Bhubaneswar, Bhubaneswar, IND
| | - Sachin Subramani
- Medicine and Surgery, Employees' State Insurance Corporation (ESIC) Medical College, Gulbarga, IND
| | - Sarah Hemaida
- Internal Medicine, Istanbul Okan University, Istanbul, TUR
| | - Thanmai Reddy Thugu
- Internal Medicine, Sri Padmavathi Medical College for Women, Sri Venkateswara Institute of Medical Sciences (SVIMS), Tirupati, IND
| | - Amna Naveed Butt
- Medicine/Internal Medicine, Allama Iqbal Medical College, Lahore, PAK
| | | | - Pareena Kaur
- Medicine, Punjab Institute of Medical Sciences, Jalandhar, IND
| | | | | | - Roheen Shahzad
- Medicine, Combined Military Hospital (CMH) Lahore Medical College and Institute of Dentistry, Lahore, PAK
| | - Mustafa Arain
- Internal Medicine, Civil Hospital Karachi, Karachi, PAK
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5
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Chee ML, Chee ML, Huang H, Mazzochi K, Taylor K, Wang H, Feng M, Ho AFW, Siddiqui FJ, Ong MEH, Liu N. Artificial intelligence and machine learning in prehospital emergency care: A scoping review. iScience 2023; 26:107407. [PMID: 37609632 PMCID: PMC10440716 DOI: 10.1016/j.isci.2023.107407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/24/2023] Open
Abstract
Our scoping review provides a comprehensive analysis of the landscape of artificial intelligence (AI) applications in prehospital emergency care (PEC). It contributes to the field by highlighting the most studied AI applications and identifying the most common methodological approaches across 106 included studies. The findings indicate a promising future for AI in PEC, with many unique use cases, such as prognostication, demand prediction, resource optimization, and the Internet of Things continuous monitoring systems. Comparisons with other approaches showed AI outperforming clinicians and non-AI algorithms in most cases. However, most studies were internally validated and retrospective, highlighting the need for rigorous prospective validation of AI applications before implementation in clinical settings. We identified knowledge and methodological gaps using an evidence map, offering a roadmap for future investigators. We also discussed the significance of explainable AI for establishing trust in AI systems among clinicians and facilitating real-world validation of AI models.
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Affiliation(s)
- Marcel Lucas Chee
- Faculty of Medicine, Nursing and Health Sciences, Monash University, Melbourne, VIC, Australia
| | - Mark Leonard Chee
- Faculty of Health and Medical Sciences, University of Adelaide, Adelaide, SA, Australia
| | - Haotian Huang
- Faculty of Medicine, Nursing and Health Sciences, Monash University, Melbourne, VIC, Australia
| | - Katelyn Mazzochi
- Faculty of Medicine, Nursing and Health Sciences, Monash University, Melbourne, VIC, Australia
| | - Kieran Taylor
- Faculty of Medicine, Nursing and Health Sciences, Monash University, Melbourne, VIC, Australia
| | - Han Wang
- Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore
| | - Mengling Feng
- Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore
| | - Andrew Fu Wah Ho
- Department of Emergency Medicine, Singapore General Hospital, Singapore, Singapore
- Pre-Hospital and Emergency Research Centre, Duke-NUS Medical School, Singapore, Singapore
| | - Fahad Javaid Siddiqui
- Pre-Hospital and Emergency Research Centre, Duke-NUS Medical School, Singapore, Singapore
| | - Marcus Eng Hock Ong
- Department of Emergency Medicine, Singapore General Hospital, Singapore, Singapore
- Pre-Hospital and Emergency Research Centre, Duke-NUS Medical School, Singapore, Singapore
| | - Nan Liu
- Pre-Hospital and Emergency Research Centre, Duke-NUS Medical School, Singapore, Singapore
- Centre for Quantitative Medicine, Duke-NUS Medical School, Singapore, Singapore
- Institute of Data Science, National University of Singapore, Singapore, Singapore
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6
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Tong Y, Udupa JK, Chong E, Winchell N, Sun C, Zou Y, Schuster SJ, Torigian DA. Prediction of lymphoma response to CAR T cells by deep learning-based image analysis. PLoS One 2023; 18:e0282573. [PMID: 37478073 PMCID: PMC10361488 DOI: 10.1371/journal.pone.0282573] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Accepted: 02/21/2023] [Indexed: 07/23/2023] Open
Abstract
Clinical prognostic scoring systems have limited utility for predicting treatment outcomes in lymphomas. We therefore tested the feasibility of a deep-learning (DL)-based image analysis methodology on pre-treatment diagnostic computed tomography (dCT), low-dose CT (lCT), and 18F-fluorodeoxyglucose positron emission tomography (FDG-PET) images and rule-based reasoning to predict treatment response to chimeric antigen receptor (CAR) T-cell therapy in B-cell lymphomas. Pre-treatment images of 770 lymph node lesions from 39 adult patients with B-cell lymphomas treated with CD19-directed CAR T-cells were analyzed. Transfer learning using a pre-trained neural network model, then retrained for a specific task, was used to predict lesion-level treatment responses from separate dCT, lCT, and FDG-PET images. Patient-level response analysis was performed by applying rule-based reasoning to lesion-level prediction results. Patient-level response prediction was also compared to prediction based on the international prognostic index (IPI) for diffuse large B-cell lymphoma. The average accuracy of lesion-level response prediction based on single whole dCT slice-based input was 0.82+0.05 with sensitivity 0.87+0.07, specificity 0.77+0.12, and AUC 0.91+0.03. Patient-level response prediction from dCT, using the "Majority 60%" rule, had accuracy 0.81, sensitivity 0.75, and specificity 0.88 using 12-month post-treatment patient response as the reference standard and outperformed response prediction based on IPI risk factors (accuracy 0.54, sensitivity 0.38, and specificity 0.61 (p = 0.046)). Prediction of treatment outcome in B-cell lymphomas from pre-treatment medical images using DL-based image analysis and rule-based reasoning is feasible. This approach can potentially provide clinically useful prognostic information for decision-making in advance of initiating CAR T-cell therapy.
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Affiliation(s)
- Yubing Tong
- Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Jayaram K Udupa
- Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Emeline Chong
- Lymphoma Program, Abramson Cancer Center, Perelman Center for Advanced Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Nicole Winchell
- Lymphoma Program, Abramson Cancer Center, Perelman Center for Advanced Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Changjian Sun
- Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Yongning Zou
- Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Stephen J Schuster
- Lymphoma Program, Abramson Cancer Center, Perelman Center for Advanced Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Drew A Torigian
- Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Lymphoma Program, Abramson Cancer Center, Perelman Center for Advanced Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
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7
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Rahman MM, Albeverio S, Kagawa T, Kawasaki S, Okai T, Oya H, Yahagi Y, Yoshida MW. High accuracy distinction of shockable and non-shockable arrhythmias in abnormal classes through wavelet transform with pseudo differential like operators. Sci Rep 2023; 13:9513. [PMID: 37308508 DOI: 10.1038/s41598-023-36463-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Accepted: 06/04/2023] [Indexed: 06/14/2023] Open
Abstract
Arrhythmia is an abnormal rhythm of the heart which leads to sudden death. Among these arrhythmias, some are shockable, and some are non-shockable arrhythmias with external defibrillation. The automated external defibrillator (AED) is used as the automated arrhythmia diagnosis system and requires an accurate and rapid decision to increase the survival rate. Therefore, a precise and quick decision by the AED has become essential in improving the survival rate. This paper presents an arrhythmia diagnosis system for the AED by engineering methods and generalized function theories. In the arrhythmia diagnosis system, the proposed wavelet transform with pseudo-differential like operators-based method effectively generates a distinguishable scalogram for the shockable and non-shockable arrhythmia in the abnormal class signals, which leads to the decision algorithm getting the best distinction. Then, a new quality parameter is introduced to get more details by quantizing the statistical features on the scalogram. Finally, design a simple AED shock and non-shock advice method by following this information to improve the precision and rapid decision. Here, an adequate topology (metric function) is adopted to the space of the scatter plot, where we can give different scales to select the best area of the scatter plot for the test sample. As a consequence, the proposed decision method gives the highest accuracy and rapid decision between shockable and non-shockable arrhythmias. The proposed arrhythmia diagnosis system increases the accuracy to 97.98%, with a gain of 11.75% compared to the conventional approach in the abnormal class signals. Therefore, the proposed method contributes an additional 11.75% possibility for increasing the survival rate. The proposed arrhythmia diagnosis system is general and could be applied to distinguish different arrhythmia-based applications. Also, each contribution could be used independently in various applications.
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Affiliation(s)
- Md Masudur Rahman
- Graduate School of Engineering, Kanagawa University, Yokohama, Japan.
| | - Sergio Albeverio
- Inst. Angewandte Mathematik, and HCM, University of Bonn, Bonn, Germany
| | - Toshinao Kagawa
- School of General Education and Management Studies, Suwa University of Science, Nagano, Japan
| | - Shuji Kawasaki
- Faculty of Science and Engineering, Iwate University, Iwate, Japan
| | - Takayuki Okai
- Faculty of Information Engineering, Tokyo City University, Tokyo, Japan
| | - Hidetoshi Oya
- Faculty of Information Engineering, Tokyo City University, Tokyo, Japan
| | - Yumi Yahagi
- Department of Information Systems, Tokyo City University, Tokyo, Japan
| | - Minoru W Yoshida
- Graduate School of Engineering, Kanagawa University, Yokohama, Japan
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8
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Stafie CS, Sufaru IG, Ghiciuc CM, Stafie II, Sufaru EC, Solomon SM, Hancianu M. Exploring the Intersection of Artificial Intelligence and Clinical Healthcare: A Multidisciplinary Review. Diagnostics (Basel) 2023; 13:1995. [PMID: 37370890 DOI: 10.3390/diagnostics13121995] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Revised: 05/31/2023] [Accepted: 06/05/2023] [Indexed: 06/29/2023] Open
Abstract
Artificial intelligence (AI) plays a more and more important role in our everyday life due to the advantages that it brings when used, such as 24/7 availability, a very low percentage of errors, ability to provide real time insights, or performing a fast analysis. AI is increasingly being used in clinical medical and dental healthcare analyses, with valuable applications, which include disease diagnosis, risk assessment, treatment planning, and drug discovery. This paper presents a narrative literature review of AI use in healthcare from a multi-disciplinary perspective, specifically in the cardiology, allergology, endocrinology, and dental fields. The paper highlights data from recent research and development efforts in AI for healthcare, as well as challenges and limitations associated with AI implementation, such as data privacy and security considerations, along with ethical and legal concerns. The regulation of responsible design, development, and use of AI in healthcare is still in early stages due to the rapid evolution of the field. However, it is our duty to carefully consider the ethical implications of implementing AI and to respond appropriately. With the potential to reshape healthcare delivery and enhance patient outcomes, AI systems continue to reveal their capabilities.
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Affiliation(s)
- Celina Silvia Stafie
- Department of Preventive Medicine and Interdisciplinarity, Grigore T. Popa University of Medicine and Pharmacy Iasi, Universitatii Street 16, 700115 Iasi, Romania
| | - Irina-Georgeta Sufaru
- Department of Periodontology, Grigore T. Popa University of Medicine and Pharmacy Iasi, Universitatii Street 16, 700115 Iasi, Romania
| | - Cristina Mihaela Ghiciuc
- Department of Morpho-Functional Sciences II-Pharmacology and Clinical Pharmacology, Grigore T. Popa University of Medicine and Pharmacy Iasi, Universitatii Street 16, 700115 Iasi, Romania
| | - Ingrid-Ioana Stafie
- Endocrinology Residency Program, Sf. Spiridon Clinical Emergency Hospital, Independentei 1, 700111 Iasi, Romania
| | | | - Sorina Mihaela Solomon
- Department of Periodontology, Grigore T. Popa University of Medicine and Pharmacy Iasi, Universitatii Street 16, 700115 Iasi, Romania
| | - Monica Hancianu
- Pharmacognosy-Phytotherapy, Grigore T. Popa University of Medicine and Pharmacy Iasi, Universitatii Street 16, 700115 Iasi, Romania
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9
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Pham VS, Nguyen A, Dang HB, Le HC, Nguyen MT. Diagnosis of sudden cardiac arrest using principal component analysis in automated external defibrillators. Sci Rep 2023; 13:8768. [PMID: 37253807 DOI: 10.1038/s41598-023-36011-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Accepted: 05/27/2023] [Indexed: 06/01/2023] Open
Abstract
Sudden cardiac arrest (SCA) consisting of ventricular fibrillation and ventricular tachycardia considered as shockable rhythms is a life-threatening heart disease, which is treated efficiently by the automated external defibrillator (AED). This work proposes a novel design of the SAA, which includes a k-nearest neighbors model and a subset of 8 features extracted from the ECG segments, for the SCA diagnosis on the electrocardiogram (ECG) signal. These features are addressed as the most productive subset among 31 input features based on the evaluation of the feature correlation. The recursive feature elimination algorithm combined with the Boosting model and wise-patient fivefold cross-validation method is adopted for the calculation of the average feature importance, which shows the degree of feature correlation, to construct various input feature subsets. Moreover, component feature combinations known as the representatives of the input feature subsets with an enormous level of correlation and independence are transformed from the input subsets by the principal component analysis method. The wise-patient fivefold cross-validation procedure is used for the evaluation of these component feature combinations on the validation set. The proposed SAA is certainly efficient for SCA detection with a small number of the extracted feature and relatively high diagnosis performance such as accuracy of 99.52%, sensitivity of 97.69%, and specificity of 99.91%.
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Affiliation(s)
- Van-Su Pham
- Data and intelligent systems laboratory, Posts and Telecommunications Institute of Technology, Hanoi, Vietnam
| | - Anh Nguyen
- Data and intelligent systems laboratory, Posts and Telecommunications Institute of Technology, Hanoi, Vietnam
| | - Hoai Bac Dang
- Posts and Telecommunications Institute of Technology, Hanoi, Vietnam
| | - Hai-Chau Le
- Data and intelligent systems laboratory, Posts and Telecommunications Institute of Technology, Hanoi, Vietnam
| | - Minh Tuan Nguyen
- Data and intelligent systems laboratory, Posts and Telecommunications Institute of Technology, Hanoi, Vietnam.
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10
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Shen CP, Freed BC, Walter DP, Perry JC, Barakat AF, Elashery ARA, Shah KS, Kutty S, McGillion M, Ng FS, Khedraki R, Nayak KR, Rogers JD, Bhavnani SP. Convolution Neural Network Algorithm for Shockable Arrhythmia Classification Within a Digitally Connected Automated External Defibrillator. J Am Heart Assoc 2023; 12:e026974. [PMID: 36942628 PMCID: PMC10227259 DOI: 10.1161/jaha.122.026974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/29/2022] [Accepted: 01/23/2023] [Indexed: 03/23/2023]
Abstract
Background Diagnosis of shockable rhythms leading to defibrillation remains integral to improving out-of-hospital cardiac arrest outcomes. New machine learning techniques have emerged to diagnose arrhythmias on ECGs. In out-of-hospital cardiac arrest, an algorithm within an automated external defibrillator is the major determinant to deliver defibrillation. This study developed and validated the performance of a convolution neural network (CNN) to diagnose shockable arrhythmias within a novel, miniaturized automated external defibrillator. Methods and Results There were 26 464 single-lead ECGs that comprised the study data set. ECGs of 7-s duration were retrospectively adjudicated by 3 physician readers (N=18 total readers). After exclusions (N=1582), ECGs were divided into training (N=23 156), validation (N=721), and test data sets (N=1005). CNN performance to diagnose shockable and nonshockable rhythms was reported with area under the receiver operating characteristic curve analysis, F1, and sensitivity and specificity calculations. The duration for the CNN to output was reported with the algorithm running within the automated external defibrillator. Internal and external validation analyses included CNN performance among arrhythmias, often mistaken for shockable rhythms, and performance among ECGs modified with noise to mimic artifacts. The CNN algorithm achieved an area under the receiver operating characteristic curve of 0.995 (95% CI, 0.990-1.0), sensitivity of 98%, and specificity of 100% to diagnose shockable rhythms. The F1 scores were 0.990 and 0.995 for shockable and nonshockable rhythms, respectively. After input of a 7-s ECG, the CNN generated an output in 383±29 ms (total time of 7.383 s). The CNN outperformed adjudicators in classifying atrial arrhythmias as nonshockable (specificity of 99.3%-98.1%) and was robust against noise artifacts (area under the receiver operating characteristic curve range, 0.871-0.999). Conclusions We demonstrate high diagnostic performance of a CNN algorithm for shockable and nonshockable rhythm arrhythmia classifications within a digitally connected automated external defibrillator. Registration URL: https://clinicaltrials.gov/ct2/show/NCT03662802; Unique identifier: NCT03662802.
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Affiliation(s)
- Christine P. Shen
- Division of Cardiology Healthcare Innovation LaboratoryScripps ClinicSan DiegoCA
| | | | | | - James C. Perry
- University of California San Diego, Rady Children’s HospitalSan DiegoCA
| | | | | | - Kevin S. Shah
- University of Utah Health Sciences CenterSalt Lake CityUT
| | | | | | - Fu Siong Ng
- Imperial College of LondonLondonUnited Kingdom
| | - Rola Khedraki
- Division of Cardiology Healthcare Innovation LaboratoryScripps ClinicSan DiegoCA
| | - Keshav R. Nayak
- Division of Interventional CardiologyScripps Mercy HospitalSan DiegoCA
| | - John D. Rogers
- Division of Cardiology Healthcare Innovation LaboratoryScripps ClinicSan DiegoCA
| | - Sanjeev P. Bhavnani
- Division of Cardiology Healthcare Innovation LaboratoryScripps ClinicSan DiegoCA
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11
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Kabra R, Israni S, Vijay B, Baru C, Mendu R, Fellman M, Sridhar A, Mason P, Cheung JW, DiBiase L, Mahapatra S, Kalifa J, Lubitz SA, Noseworthy PA, Navara R, McManus DD, Cohen M, Chung MK, Trayanova N, Gopinathannair R, Lakkireddy D. Emerging role of artificial intelligence in cardiac electrophysiology. CARDIOVASCULAR DIGITAL HEALTH JOURNAL 2022; 3:263-275. [PMID: 36589314 PMCID: PMC9795267 DOI: 10.1016/j.cvdhj.2022.09.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023] Open
Abstract
Artificial intelligence (AI) and machine learning (ML) have significantly impacted the field of cardiovascular medicine, especially cardiac electrophysiology (EP), on multiple fronts. The goal of this review is to familiarize readers with the field of AI and ML and their emerging role in EP. The current review is divided into 3 sections. In the first section, we discuss the definitions and basics of AI, ML, and big data. In the second section, we discuss their application to EP in the context of detection, prediction, and management of arrhythmias. Finally, we discuss the regulatory issues, challenges, and future directions of AI in EP.
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Affiliation(s)
- Rajesh Kabra
- Kansas City Heart Rhythm Institute, Kansas City, Kansas
| | - Sharat Israni
- Bakar Computational Health Sciences Institute, University of California, San Francisco, California
| | | | - Chaitanya Baru
- San Diego Supercomputer Center, University of California, San Diego, San Diego, California
| | | | | | | | - Pamela Mason
- Department of Medicine, University of Virginia, Charlottesville, Virginia
| | - Jim W. Cheung
- Division of Cardiology, Department of Medicine, Weill Cornell Medicine, New York, New York
| | - Luigi DiBiase
- Albert Einstein College of Medicine at Montefiore Hospital, New York, New York
| | - Srijoy Mahapatra
- Department of Medicine, University of Minnesota, Minneapolis, Minnesota
| | - Jerome Kalifa
- Department of Cardiology, Brown University, Providence, Rhode Island
| | - Steven A. Lubitz
- Cardiac Arrhythmia Service, Massachusetts General Hospital, Boston, Massachusetts
| | | | - Rachita Navara
- Division of Cardiac Electrophysiology, University of California, San Francisco, San Francisco, California
| | - David D. McManus
- Department of Medicine, University of Massachusetts Chan Medical School, Worcester, Massachusetts
| | - Mitchell Cohen
- Division of Pediatric Cardiology, INOVA Children’s Hospital, Fairfax, Virginia
| | - Mina K. Chung
- Division of Cardiovascular Medicine, Cleveland Clinic, Cleveland, Ohio
| | - Natalia Trayanova
- Department of Biomedical Engineering and Alliance for Cardiovascular Diagnostic and Treatment Innovation, Johns Hopkins University, Baltimore, Maryland
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12
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Brown G, Conway S, Ahmad M, Adegbie D, Patel N, Myneni V, Alradhawi M, Kumar N, Obaid DR, Pimenta D, Bray JJH. Role of artificial intelligence in defibrillators: a narrative review. Open Heart 2022; 9:openhrt-2022-001976. [PMID: 35790317 PMCID: PMC9258481 DOI: 10.1136/openhrt-2022-001976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 05/17/2022] [Indexed: 02/01/2023] Open
Abstract
Automated external defibrillators (AEDs) and implantable cardioverter defibrillators (ICDs) are used to treat life-threatening arrhythmias. AEDs and ICDs use shock advice algorithms to classify ECG tracings as shockable or non-shockable rhythms in clinical practice. Machine learning algorithms have recently been assessed for shock decision classification with increasing accuracy. Outside of rhythm classification alone, they have been evaluated in diagnosis of causes of cardiac arrest, prediction of success of defibrillation and rhythm classification without the need to interrupt cardiopulmonary resuscitation. This review explores the many applications of machine learning in AEDs and ICDs. While these technologies are exciting areas of research, there remain limitations to their widespread use including high processing power, cost and the ‘black-box’ phenomenon.
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Affiliation(s)
- Grace Brown
- Cardiology Department, Royal Free Hospital, London, UK
| | - Samuel Conway
- Cardiology Department, Royal Free Hospital, London, UK
| | - Mahmood Ahmad
- Medical Sciences, University College London, London, UK
| | - Divine Adegbie
- Cardiology Department, East and North Hertfordshire NHS Trust, Stevenage, Hertfordshire, UK
| | - Nishil Patel
- Cardiology Department, North Middlesex University Hospital, London, UK
| | | | | | - Niraj Kumar
- Institute of Cardiovascular Science, University College London, London, UK.,Cardiology Department, Barts Health NHS Trust, London, UK
| | - Daniel R Obaid
- Institute of Life Sciences, Swansea University, Swansea, UK
| | - Dominic Pimenta
- Cardiology Department, Richmond Research Institute, London, UK
| | - Jonathan J H Bray
- Cardiff University College of Biomedical and Life Sciences, Cardiff, UK
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13
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Busnatu Ș, Niculescu AG, Bolocan A, Petrescu GED, Păduraru DN, Năstasă I, Lupușoru M, Geantă M, Andronic O, Grumezescu AM, Martins H. Clinical Applications of Artificial Intelligence-An Updated Overview. J Clin Med 2022; 11:jcm11082265. [PMID: 35456357 PMCID: PMC9031863 DOI: 10.3390/jcm11082265] [Citation(s) in RCA: 46] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 04/09/2022] [Accepted: 04/14/2022] [Indexed: 12/16/2022] Open
Abstract
Artificial intelligence has the potential to revolutionize modern society in all its aspects. Encouraged by the variety and vast amount of data that can be gathered from patients (e.g., medical images, text, and electronic health records), researchers have recently increased their interest in developing AI solutions for clinical care. Moreover, a diverse repertoire of methods can be chosen towards creating performant models for use in medical applications, ranging from disease prediction, diagnosis, and prognosis to opting for the most appropriate treatment for an individual patient. In this respect, the present paper aims to review the advancements reported at the convergence of AI and clinical care. Thus, this work presents AI clinical applications in a comprehensive manner, discussing the recent literature studies classified according to medical specialties. In addition, the challenges and limitations hindering AI integration in the clinical setting are further pointed out.
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Affiliation(s)
- Ștefan Busnatu
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Adelina-Gabriela Niculescu
- Department of Science and Engineering of Oxide Materials and Nanomaterials, Faculty of Applied Chemistry and Materials Science, Politehnica University of Bucharest, 011061 Bucharest, Romania;
| | - Alexandra Bolocan
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - George E. D. Petrescu
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Dan Nicolae Păduraru
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Iulian Năstasă
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Mircea Lupușoru
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Marius Geantă
- Centre for Innovation in Medicine, “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania;
| | - Octavian Andronic
- “Carol Davila” University of Medicine and Pharmacy, 050474 Bucharest, Romania; (Ș.B.); (A.B.); (G.E.D.P.); (D.N.P.); (I.N.); (M.L.); (O.A.)
| | - Alexandru Mihai Grumezescu
- Department of Science and Engineering of Oxide Materials and Nanomaterials, Faculty of Applied Chemistry and Materials Science, Politehnica University of Bucharest, 011061 Bucharest, Romania;
- Research Institute of the University of Bucharest—ICUB, University of Bucharest, 050657 Bucharest, Romania
- Academy of Romanian Scientists, Ilfov No. 3, 50044 Bucharest, Romania
- Correspondence:
| | - Henrique Martins
- Faculty of Health Sciences, Universidade da Beira Interior, 6200-506 Covilha, Portugal;
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14
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Van den Eynde J, Lachmann M, Laugwitz KL, Manlhiot C, Kutty S. Successfully Implemented Artificial Intelligence and Machine Learning Applications In Cardiology: State-of-the-Art Review. Trends Cardiovasc Med 2022:S1050-1738(22)00012-3. [DOI: 10.1016/j.tcm.2022.01.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Revised: 01/11/2022] [Accepted: 01/23/2022] [Indexed: 01/14/2023]
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15
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Manlhiot C, van den Eynde J, Kutty S, Ross HJ. A Primer on the Present State and Future Prospects for Machine Learning and Artificial Intelligence Applications in Cardiology. Can J Cardiol 2021; 38:169-184. [PMID: 34838700 DOI: 10.1016/j.cjca.2021.11.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 11/03/2021] [Accepted: 11/13/2021] [Indexed: 12/14/2022] Open
Abstract
The artificial intelligence (AI) revolution is well underway, including in the medical field, and has dramatically transformed our lives. An understanding of the basics of AI applications, their development, and challenges to their clinical implementation is important for clinicians to fully appreciate the possibilities of AI. Such a foundation would ensure that clinicians have a good grasp and realistic expectations for AI in medicine and prevent discrepancies between the promised and real-world impact. When quantifying the track record for AI applications in cardiology, we found that a substantial number of AI systems are never deployed in clinical practice, although there certainly are many success stories. Successful implementations shared the following: they came from clinical areas where large amount of training data was available; were deployable into a single diagnostic modality; prediction models generally had high performance on external validation; and most were developed as part of collaborations with medical device manufacturers who had substantial experience with implementation of new technology. When looking into the current processes used for developing AI-based systems, we suggest that expanding the analytic framework to address potential deployment and implementation issues at project outset will improve the rate of successful implementation, and will be a necessary next step for AI to achieve its full potential in cardiovascular medicine.
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Affiliation(s)
- Cedric Manlhiot
- Blalock-Taussig-Thomas Pediatric and Congenital Heart Center, Department of Pediatrics, Johns Hopkins School of Medicine, Johns Hopkins University, Baltimore, Maryland, USA.
| | - Jef van den Eynde
- Blalock-Taussig-Thomas Pediatric and Congenital Heart Center, Department of Pediatrics, Johns Hopkins School of Medicine, Johns Hopkins University, Baltimore, Maryland, USA; Department of Cardiovascular Sciences, KU Leuven, Leuven, Belgium
| | - Shelby Kutty
- Blalock-Taussig-Thomas Pediatric and Congenital Heart Center, Department of Pediatrics, Johns Hopkins School of Medicine, Johns Hopkins University, Baltimore, Maryland, USA
| | - Heather J Ross
- Ted Rogers Centre for Heart Research, Peter Munk Cardiac Centre, University Health Network, Department of Medicine, University of Toronto, Toronto, Ontario, Canada
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16
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Hammad M, Kandala RN, Abdelatey A, Abdar M, Zomorodi‐Moghadam M, Tan RS, Acharya UR, Pławiak J, Tadeusiewicz R, Makarenkov V, Sarrafzadegan N, Khosravi A, Nahavandi S, EL-Latif AAA, Pławiak P. Automated detection of shockable ECG signals: A review. Inf Sci (N Y) 2021. [DOI: 10.1016/j.ins.2021.05.035] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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17
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Nagarajan VD, Lee SL, Robertus JL, Nienaber CA, Trayanova NA, Ernst S. Artificial intelligence in the diagnosis and management of arrhythmias. Eur Heart J 2021; 42:3904-3916. [PMID: 34392353 PMCID: PMC8497074 DOI: 10.1093/eurheartj/ehab544] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Revised: 01/06/2021] [Accepted: 07/27/2021] [Indexed: 01/05/2023] Open
Abstract
The field of cardiac electrophysiology (EP) had adopted simple artificial intelligence (AI) methodologies for decades. Recent renewed interest in deep learning techniques has opened new frontiers in electrocardiography analysis including signature identification of diseased states. Artificial intelligence advances coupled with simultaneous rapid growth in computational power, sensor technology, and availability of web-based platforms have seen the rapid growth of AI-aided applications and big data research. Changing lifestyles with an expansion of the concept of internet of things and advancements in telecommunication technology have opened doors to population-based detection of atrial fibrillation in ways, which were previously unimaginable. Artificial intelligence-aided advances in 3D cardiac imaging heralded the concept of virtual hearts and the simulation of cardiac arrhythmias. Robotics, completely non-invasive ablation therapy, and the concept of extended realities show promise to revolutionize the future of EP. In this review, we discuss the impact of AI and recent technological advances in all aspects of arrhythmia care.
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Affiliation(s)
- Venkat D Nagarajan
- Department of Cardiology, Royal Brompton and Harefield NHS Foundation Trust, Sydney Street, London SW3 6NP, UK.,Department of Cardiology, Doncaster and Bassetlaw Hospitals, NHS Foundation Trust, Thorne Road, Doncaster DN2 5LT, UK
| | - Su-Lin Lee
- Wellcome/EPSRC Centre for Interventional and Surgical Sciences (WEISS), UCL, Foley Street, London W1W 7TS, UK
| | - Jan-Lukas Robertus
- Department of Pathology, Royal Brompton and Harefield NHS Foundation Trust, Sydney Street, London SW3 6NP, UK.,National Heart and Lung Institute, Imperial College London, Guy Scadding Building, Dovehouse St, London SW3 6LY, UK
| | - Christoph A Nienaber
- Department of Cardiology, Royal Brompton and Harefield NHS Foundation Trust, Sydney Street, London SW3 6NP, UK.,National Heart and Lung Institute, Imperial College London, Guy Scadding Building, Dovehouse St, London SW3 6LY, UK
| | - Natalia A Trayanova
- Department of Biomedical Engineering, Johns Hopkins University, Charles Street, Baltimore, MD 21218, USA
| | - Sabine Ernst
- Department of Cardiology, Royal Brompton and Harefield NHS Foundation Trust, Sydney Street, London SW3 6NP, UK.,National Heart and Lung Institute, Imperial College London, Guy Scadding Building, Dovehouse St, London SW3 6LY, UK
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18
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Integration of novel monitoring devices with machine learning technology for scalable cardiovascular management. Nat Rev Cardiol 2020; 18:75-91. [PMID: 33037325 PMCID: PMC7545156 DOI: 10.1038/s41569-020-00445-9] [Citation(s) in RCA: 89] [Impact Index Per Article: 22.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 09/01/2020] [Indexed: 01/19/2023]
Abstract
Ambulatory monitoring is increasingly important for cardiovascular care but is often limited by the unpredictability of cardiovascular events, the intermittent nature of ambulatory monitors and the variable clinical significance of recorded data in patients. Technological advances in computing have led to the introduction of novel physiological biosignals that can increase the frequency at which abnormalities in cardiovascular parameters can be detected, making expert-level, automated diagnosis a reality. However, use of these biosignals for diagnosis also raises numerous concerns related to accuracy and actionability within clinical guidelines, in addition to medico-legal and ethical issues. Analytical methods such as machine learning can potentially increase the accuracy and improve the actionability of device-based diagnoses. Coupled with interoperability of data to widen access to all stakeholders, seamless connectivity (an internet of things) and maintenance of anonymity, this approach could ultimately facilitate near-real-time diagnosis and therapy. These tools are increasingly recognized by regulatory agencies and professional medical societies, but several technical and ethical issues remain. In this Review, we describe the current state of cardiovascular monitoring along the continuum from biosignal acquisition to the identification of novel biosensors and the development of analytical techniques and ultimately to regulatory and ethical issues. Furthermore, we outline new paradigms for cardiovascular monitoring. Advances in cardiovascular monitoring technologies have resulted in an influx of consumer-targeted wearable sensors that have the potential to detect numerous heart conditions. In this Review, Krittanawong and colleagues describe processes involved in biosignal acquisition and analysis of cardiovascular monitors, as well as their associated ethical, regulatory and legal challenges. Advances in the use of cardiovascular monitoring technologies, such as the development of novel portable sensors and machine learning algorithms that can provide near-real-time diagnosis, have the potential to provide personalized care. Wearable sensor technologies can detect numerous biosignals, such as cardiac output, blood-pressure levels and heart rhythm, and can integrate multiple modalities. The use of novel biosignals for diagnosis raises concerns regarding accuracy and actionability within clinical guidelines, in addition to medical, legal and ethical issues. Machine learning-based interpretation of biosensor data can facilitate rapid evaluation of the haemodynamic consequences of heart failure or arrhythmias, but is limited by the presence of noise and training data that might not be representative of the real-world clinical setting. The use of data derived from cardiovascular monitoring devices is associated with numerous challenges, such as data security, accessibility and ownership, in addition to other ethical and regulatory concerns.
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19
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Ebrahimi Z, Loni M, Daneshtalab M, Gharehbaghi A. A review on deep learning methods for ECG arrhythmia classification. ACTA ACUST UNITED AC 2020. [DOI: 10.1016/j.eswax.2020.100033] [Citation(s) in RCA: 71] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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20
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Detection of sudden cardiac death by a comparative study of heart rate variability in normal and abnormal heart conditions. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2020.06.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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21
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Hong S, Zhou Y, Shang J, Xiao C, Sun J. Opportunities and challenges of deep learning methods for electrocardiogram data: A systematic review. Comput Biol Med 2020; 122:103801. [PMID: 32658725 DOI: 10.1016/j.compbiomed.2020.103801] [Citation(s) in RCA: 108] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2019] [Revised: 04/30/2020] [Accepted: 04/30/2020] [Indexed: 12/15/2022]
Abstract
BACKGROUND The electrocardiogram (ECG) is one of the most commonly used diagnostic tools in medicine and healthcare. Deep learning methods have achieved promising results on predictive healthcare tasks using ECG signals. OBJECTIVE This paper presents a systematic review of deep learning methods for ECG data from both modeling and application perspectives. METHODS We extracted papers that applied deep learning (deep neural network) models to ECG data that were published between January 1st of 2010 and February 29th of 2020 from Google Scholar, PubMed, and the Digital Bibliography & Library Project. We then analyzed each article according to three factors: tasks, models, and data. Finally, we discuss open challenges and unsolved problems in this area. RESULTS The total number of papers extracted was 191. Among these papers, 108 were published after 2019. Different deep learning architectures have been used in various ECG analytics tasks, such as disease detection/classification, annotation/localization, sleep staging, biometric human identification, and denoising. CONCLUSION The number of works on deep learning for ECG data has grown explosively in recent years. Such works have achieved accuracy comparable to that of traditional feature-based approaches and ensembles of multiple approaches can achieve even better results. Specifically, we found that a hybrid architecture of a convolutional neural network and recurrent neural network ensemble using expert features yields the best results. However, there are some new challenges and problems related to interpretability, scalability, and efficiency that must be addressed. Furthermore, it is also worth investigating new applications from the perspectives of datasets and methods. SIGNIFICANCE This paper summarizes existing deep learning research using ECG data from multiple perspectives and highlights existing challenges and problems to identify potential future research directions.
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Affiliation(s)
- Shenda Hong
- Department of Computational Science and Engineering, Georgia Institute of Technology, Atlanta, USA.
| | - Yuxi Zhou
- School of Electronics Engineering and Computer Science, Peking University, Beijing, China; Key Laboratory of Machine Perception (Ministry of Education), Peking University, Beijing, China.
| | - Junyuan Shang
- School of Electronics Engineering and Computer Science, Peking University, Beijing, China; Key Laboratory of Machine Perception (Ministry of Education), Peking University, Beijing, China.
| | - Cao Xiao
- Analytics Center of Excellence, IQVIA, Cambridge, USA.
| | - Jimeng Sun
- Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, USA.
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22
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Deep learning models for electrocardiograms are susceptible to adversarial attack. Nat Med 2020; 26:360-363. [PMID: 32152582 DOI: 10.1038/s41591-020-0791-x] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Accepted: 02/05/2020] [Indexed: 01/24/2023]
Abstract
Electrocardiogram (ECG) acquisition is increasingly widespread in medical and commercial devices, necessitating the development of automated interpretation strategies. Recently, deep neural networks have been used to automatically analyze ECG tracings and outperform physicians in detecting certain rhythm irregularities1. However, deep learning classifiers are susceptible to adversarial examples, which are created from raw data to fool the classifier such that it assigns the example to the wrong class, but which are undetectable to the human eye2,3. Adversarial examples have also been created for medical-related tasks4,5. However, traditional attack methods to create adversarial examples do not extend directly to ECG signals, as such methods introduce square-wave artefacts that are not physiologically plausible. Here we develop a method to construct smoothed adversarial examples for ECG tracings that are invisible to human expert evaluation and show that a deep learning model for arrhythmia detection from single-lead ECG6 is vulnerable to this type of attack. Moreover, we provide a general technique for collating and perturbing known adversarial examples to create multiple new ones. The susceptibility of deep learning ECG algorithms to adversarial misclassification implies that care should be taken when evaluating these models on ECGs that may have been altered, particularly when incentives for causing misclassification exist.
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Abstract
Introduction: With the increase in the number of patients with cardiovascular diseases, better risk-prediction models for cardiovascular events are needed. Statistical-based risk-prediction models for cardiovascular events (CVEs) are available, but they lack the ability to predict individual-level risk. Machine learning (ML) methods are especially equipped to handle complex data and provide accurate risk-prediction models at the individual level.Areas covered: In this review, the authors summarize the literature comparing the performance of machine learning methods to that of traditional, statistical-based models in predicting CVEs. They provide a brief summary of ML methods and then discuss risk-prediction models for CVEs such as major adverse cardiovascular events, heart failure and arrhythmias.Expert opinion: Current evidence supports the superiority of ML methods over statistical-based models in predicting CVEs. Statistical models are applicable at the population level and are subject to overfitting, while ML methods can provide an individualized risk level for CVEs. Further prospective research on ML-guided treatments to prevent CVEs is needed.
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Affiliation(s)
- Brijesh Patel
- Heart and Vascular Institute, West Virginia University, Morgantown, WV, USA
| | - Partho Sengupta
- Heart and Vascular Institute, West Virginia University, Morgantown, WV, USA
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24
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Rim B, Sung NJ, Min S, Hong M. Deep Learning in Physiological Signal Data: A Survey. SENSORS (BASEL, SWITZERLAND) 2020; 20:E969. [PMID: 32054042 PMCID: PMC7071412 DOI: 10.3390/s20040969] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Revised: 01/31/2020] [Accepted: 02/09/2020] [Indexed: 12/11/2022]
Abstract
Deep Learning (DL), a successful promising approach for discriminative and generative tasks, has recently proved its high potential in 2D medical imaging analysis; however, physiological data in the form of 1D signals have yet to be beneficially exploited from this novel approach to fulfil the desired medical tasks. Therefore, in this paper we survey the latest scientific research on deep learning in physiological signal data such as electromyogram (EMG), electrocardiogram (ECG), electroencephalogram (EEG), and electrooculogram (EOG). We found 147 papers published between January 2018 and October 2019 inclusive from various journals and publishers. The objective of this paper is to conduct a detailed study to comprehend, categorize, and compare the key parameters of the deep-learning approaches that have been used in physiological signal analysis for various medical applications. The key parameters of deep-learning approach that we review are the input data type, deep-learning task, deep-learning model, training architecture, and dataset sources. Those are the main key parameters that affect system performance. We taxonomize the research works using deep-learning method in physiological signal analysis based on: (1) physiological signal data perspective, such as data modality and medical application; and (2) deep-learning concept perspective such as training architecture and dataset sources.
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Affiliation(s)
- Beanbonyka Rim
- Department of Computer Science, Soonchunhyang University, Asan 31538, Korea
| | - Nak-Jun Sung
- Department of Computer Science, Soonchunhyang University, Asan 31538, Korea
| | - Sedong Min
- Department of Medical IT Engineering, Soonchunhyang University, Asan 31538, Korea
| | - Min Hong
- Department of Computer Software Engineering, Soonchunhyang University, Asan 31538, Korea
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25
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Dora C, Biswal PK. Correlation-based ECG Artifact Correction from Single Channel EEG using Modified Variational Mode Decomposition. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2020; 183:105092. [PMID: 31600608 DOI: 10.1016/j.cmpb.2019.105092] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Revised: 09/11/2019] [Accepted: 09/23/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE Ambulatory based healthcare system use limited electrodes for electroencephalogram (EEG) acquisition at concerned electrode position, to minimize the instrumentation and computational complexity. But, again the possibility of contamination is inevitable depending on the electrode position on the scalp. This paper proposes an electrocardiogram (ECG) artifact correction algorithm in the absence of coherent ECG for automatic analysis/diagnosis of the acquired contaminated single channel EEG signal. METHODS The proposed algorithm uses an enhanced and modified version of signal decomposition i.e. modified variational mode decomposition (mVMD) to obtain band limited intrinsic mode functions (BLIMFs) from EEG epoch. The mVMD is found to be useful when the signal contains properties that are correlated. Further, exploiting the correlation among the obtained mode functions the ECG artifact components are identified. An ECG reference is estimated and QRS complexes are suppressed. The effective EEG reconstruction is performed by simply adding the remaining BLIMFs to QRS complex suppressed estimated reference. This is owing to the robust reconstruction feature provided by mVMD. RESULTS Upon the comparative evaluation for both real and semi-simulated dataset, the proposed algorithm is providing less distortion to the EEG brain activity frequency bands, and is also less computationally intensive than the existing Ensembled empirical mode decomposition (EEMD) based algorithm that requires ECG reference channel. Evaluation of semi-simulated dataset obtained an average correlation of 97% between EEG signals before contamination and after correction of ECG artifact. CONCLUSION The proposed algorithm efficiently corrects the ECG artifact from EEG while overcoming the limitations such as, (1) requirement of a reference ECG channel, (2) requirement of R-R interval or amplitude thresholding for QRS complex identification.
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Affiliation(s)
- Chinmayee Dora
- Dept. of Electronics & Telecommunication Engineering, International Institute of Information Technology, Bhubaneswar, India
| | - Pradyut Kumar Biswal
- Dept. of Electronics & Telecommunication Engineering, International Institute of Information Technology, Bhubaneswar, India.
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Picon A, Irusta U, Álvarez-Gila A, Aramendi E, Alonso-Atienza F, Figuera C, Ayala U, Garrote E, Wik L, Kramer-Johansen J, Eftestøl T. Mixed convolutional and long short-term memory network for the detection of lethal ventricular arrhythmia. PLoS One 2019; 14:e0216756. [PMID: 31107876 PMCID: PMC6527215 DOI: 10.1371/journal.pone.0216756] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Accepted: 04/26/2019] [Indexed: 11/29/2022] Open
Abstract
Early defibrillation by an automated external defibrillator (AED) is key for the survival of out-of-hospital cardiac arrest (OHCA) patients. ECG feature extraction and machine learning have been successfully used to detect ventricular fibrillation (VF) in AED shock decision algorithms. Recently, deep learning architectures based on 1D Convolutional Neural Networks (CNN) have been proposed for this task. This study introduces a deep learning architecture based on 1D-CNN layers and a Long Short-Term Memory (LSTM) network for the detection of VF. Two datasets were used, one from public repositories of Holter recordings captured at the onset of the arrhythmia, and a second from OHCA patients obtained minutes after the onset of the arrest. Data was partitioned patient-wise into training (80%) to design the classifiers, and test (20%) to report the results. The proposed architecture was compared to 1D-CNN only deep learners, and to a classical approach based on VF-detection features and a support vector machine (SVM) classifier. The algorithms were evaluated in terms of balanced accuracy (BAC), the unweighted mean of the sensitivity (Se) and specificity (Sp). The BAC, Se, and Sp of the architecture for 4-s ECG segments was 99.3%, 99.7%, and 98.9% for the public data, and 98.0%, 99.2%, and 96.7% for OHCA data. The proposed architecture outperformed all other classifiers by at least 0.3-points in BAC in the public data, and by 2.2-points in the OHCA data. The architecture met the 95% Sp and 90% Se requirements of the American Heart Association in both datasets for segment lengths as short as 3-s. This is, to the best of our knowledge, the most accurate VF detection algorithm to date, especially on OHCA data, and it would enable an accurate shock no shock diagnosis in a very short time.
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Affiliation(s)
- Artzai Picon
- Computer Vision Group, Tecnalia Research & Innovation, Derio, Spain
| | - Unai Irusta
- Department of Communications Engineering, University of the Basque Country UPV/EHU, Bilbao, Spain
| | | | - Elisabete Aramendi
- Department of Communications Engineering, University of the Basque Country UPV/EHU, Bilbao, Spain
| | - Felipe Alonso-Atienza
- Department of Signal Theory and Communications, Rey Juan Carlos University, Madrid, Spain
- Client Solutions Advanced Analytics, BBVA, Madrid, Spain
| | - Carlos Figuera
- Department of Signal Theory and Communications, Rey Juan Carlos University, Madrid, Spain
- Client Solutions Advanced Analytics, BBVA, Madrid, Spain
| | - Unai Ayala
- Electronics and Computing Department, Mondragon Unibertsitatea, Faculty of Engineering (MU-ENG), Mondragón, Spain
| | | | - Lars Wik
- Norwegian National Advisory Unit on Prehospital Emergency Medicine (NAKOS), Oslo University Hospital and University of Oslo, Oslo, Norway
| | - Jo Kramer-Johansen
- Norwegian National Advisory Unit on Prehospital Emergency Medicine (NAKOS), Oslo University Hospital and University of Oslo, Oslo, Norway
| | - Trygve Eftestøl
- Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway
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