1
|
Mazurkiewicz M, Pawłowska J, Barrenechea Angeles I, Grzelak K, Deja K, Zaborska A, Pawłowski J, Włodarska-Kowalczuk M. Sediment DNA metabarcoding and morphology provide complementary insight into macrofauna and meiobenthos response to environmental gradients in an Arctic glacial fjord. MARINE ENVIRONMENTAL RESEARCH 2024; 198:106552. [PMID: 38788477 DOI: 10.1016/j.marenvres.2024.106552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 05/09/2024] [Accepted: 05/10/2024] [Indexed: 05/26/2024]
Abstract
Arctic fjords ecosystems are highly dynamic, with organisms exposed to various natural stressors along with productivity clines driven by advection of water masses from shelves. The benthic response to these environmental clines has been extensively studied using traditional, morphology-based approaches mostly focusing on macroinvertebrates. In this study we analyse the effects of glacially mediated disturbance on the biodiversity of benthic macrofauna and meiobenthos (meiofauna and Foraminifera) in a Svalbard fjord by comparing morphology and eDNA metabarcoding. Three genetic markers targeting metazoans (COI), meiofauna (18S V1V2) and Foraminifera (18S 37f) were analyzed. Univariate measures of alpha diversity and multivariate compositional dissimilarities were calculated and tested for similarities in response to environmental gradients using correlation analysis. Our study showed different taxonomic composition of morphological and molecular datasets for both macrofauna and meiobenthos. Some taxonomic groups while abundant in metabarcoding data were almost absent in morphology-based inventory and vice versa. In general, species richness and diversity measures in macrofauna morphological data were higher than in metabarcoding, and similar for the meiofauna. Both methodological approaches showed different patterns of response to the glacially mediated disturbance for the macrofauna and the meiobenthos. Macrofauna showed an evident distinction in taxonomic composition and a dramatic cline in alpha diversity indices between the outer and inner parts of fjord, while the meiobenthos showed a gradual change and more subtle responses to environmental changes along the fjord axis. The two methods can be seen as complementing rather than replacing each other. Morphological approach provides more accurate inventory of larger size species and more reliable quantitative data, while metabarcoding allows identification of inconspicuous taxa that are overlooked in morphology-based studies. As different taxa may show different sensitivities to environmental changes, both methods shall be used to monitor marine biodiversity in Arctic ecosystems and its response to dramatically changing environmental conditions.
Collapse
Affiliation(s)
- Mikołaj Mazurkiewicz
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland.
| | - Joanna Pawłowska
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland
| | - Inés Barrenechea Angeles
- Department of Geosciences, The Arctic University of Norway, Dramsvegen 201, 9010, Tromsø, Norway
| | - Katarzyna Grzelak
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland
| | - Kajetan Deja
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland
| | - Agata Zaborska
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland
| | - Jan Pawłowski
- Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712, Sopot, Poland; ID-Gene Ecodiagnostics, Chemin du Pont-du-Centenaire 109, 1228, Plan-les-Ouates, Switzerland
| | | |
Collapse
|
2
|
Pomeranz J, Junker JR, Gjoni V, Wesner JS. Maximum likelihood outperforms binning methods for detecting differences in abundance size spectra across environmental gradients. J Anim Ecol 2024; 93:267-280. [PMID: 38167802 DOI: 10.1111/1365-2656.14044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 11/21/2023] [Indexed: 01/05/2024]
Abstract
Individual body size distributions (ISD) within communities are remarkably consistent across habitats and spatiotemporal scales and can be represented by size spectra, which are described by a power law. The focus of size spectra analysis is to estimate the exponent (λ ) of the power law. A common application of size spectra studies is to detect anthropogenic pressures. Many methods have been proposed for estimatingλ most of which involve binning the data, counting the abundance within bins, and then fitting an ordinary least squares regression in log-log space. However, recent work has shown that binning procedures return biased estimates ofλ compared to procedures that directly estimateλ using maximum likelihood estimation (MLE). While it is clear that MLE produces less biased estimates of site-specific λ's, it is less clear how this bias affects the ability to test for changes in λ across space and time, a common question in the ecological literature. Here, we used simulation to compare the ability of two normalised binning methods (equal logarithmic and log2 bins) and MLE to (1) recapture known values ofλ , and (2) recapture parameters in a linear regression measuring the change inλ across a hypothetical environmental gradient. We also compared the methods using two previously published body size datasets across a natural temperature gradient and an anthropogenic pollution gradient. Maximum likelihood methods always performed better than common binning methods, which demonstrated consistent bias depending on the simulated values ofλ . This bias carried over to the regressions, which were more accurate whenλ was estimated using MLE compared to the binning procedures. Additionally, the variance in estimates using MLE methods is markedly reduced when compared to binning methods. The error induced by binning methods can be of similar magnitudes as the variation previously published in experimental and observational studies, bringing into question the effect sizes of previously published results. However, while the methods produced different regression slope estimates, they were in qualitative agreement on the sign of those slopes (i.e. all negative or all positive). Our results provide further support for the direct estimation ofλ and its relative variation across environmental gradients using MLE over the more common methods of binning.
Collapse
Affiliation(s)
| | - James R Junker
- Great Lakes Research Center, Michigan Technological University, Houghton, Michigan, USA
- Louisiana Universities Marine Consortium, Chauvin, Louisiana, USA
| | - Vojsava Gjoni
- Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
| | - Jeff S Wesner
- Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
| |
Collapse
|
3
|
Audzijonyte A, Delius GW, Stuart-Smith RD, Novaglio C, Edgar GJ, Barrett NS, Blanchard JL. Changes in sea floor productivity are crucial to understanding the impact of climate change in temperate coastal ecosystems according to a new size-based model. PLoS Biol 2023; 21:e3002392. [PMID: 38079442 PMCID: PMC10712853 DOI: 10.1371/journal.pbio.3002392] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Accepted: 10/19/2023] [Indexed: 12/18/2023] Open
Abstract
The multifaceted effects of climate change on physical and biogeochemical processes are rapidly altering marine ecosystems but often are considered in isolation, leaving our understanding of interactions between these drivers of ecosystem change relatively poor. This is particularly true for shallow coastal ecosystems, which are fuelled by a combination of distinct pelagic and benthic energy pathways that may respond to climate change in fundamentally distinct ways. The fish production supported by these systems is likely to be impacted by climate change differently to those of offshore and shelf ecosystems, which have relatively simpler food webs and mostly lack benthic primary production sources. We developed a novel, multispecies size spectrum model for shallow coastal reefs, specifically designed to simulate potential interactive outcomes of changing benthic and pelagic energy inputs and temperatures and calculate the relative importance of these variables for the fish community. Our model, calibrated using field data from an extensive temperate reef monitoring program, predicts that changes in resource levels will have much stronger impacts on fish biomass and yields than changes driven by physiological responses to temperature. Under increased plankton abundance, species in all fish trophic groups were predicted to increase in biomass, average size, and yields. By contrast, changes in benthic resources produced variable responses across fish trophic groups. Increased benthic resources led to increasing benthivorous and piscivorous fish biomasses, yields, and mean body sizes, but biomass decreases among herbivore and planktivore species. When resource changes were combined with warming seas, physiological responses generally decreased species' biomass and yields. Our results suggest that understanding changes in benthic production and its implications for coastal fisheries should be a priority research area. Our modified size spectrum model provides a framework for further study of benthic and pelagic energy pathways that can be easily adapted to other ecosystems.
Collapse
Affiliation(s)
- Asta Audzijonyte
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
- Centre for Marine Socioecology, University of Tasmania, Hobart, Australia
| | - Gustav W. Delius
- Department of Mathematics, University of York, York, United Kingdom
| | - Rick D. Stuart-Smith
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
| | - Camilla Novaglio
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
- Centre for Marine Socioecology, University of Tasmania, Hobart, Australia
| | - Graham J. Edgar
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
| | - Neville S. Barrett
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
| | - Julia L. Blanchard
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Australia
- Centre for Marine Socioecology, University of Tasmania, Hobart, Australia
| |
Collapse
|
4
|
Pomeranz JPF, Junker JR, Wesner JS. Individual size distributions across North American streams vary with local temperature. GLOBAL CHANGE BIOLOGY 2022; 28:848-858. [PMID: 34432930 DOI: 10.1111/gcb.15862] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
Parameters describing the negative relationship between abundance and body size within ecological communities provide a summary of many important biological processes. While it is considered to be one of the few consistent patterns in ecology, spatiotemporal variation of this relationship across continental scale temperature gradients is unknown. Using a database of stream communities collected across North America (18-68°N latitude, -4 to 25°C mean annual air temperature) over 3 years, we constructed 160 individual size distribution (ISD) relationships (i.e. abundance size spectra). The exponent parameter describing ISD's decreased (became steeper) with increasing mean annual temperature, with median slopes varying by ~0.2 units across the 29°C temperature gradient. In addition, total community biomass increased with increasing temperatures, contrary with theoretical predictions. Our study suggests conservation of ISD relationships in streams across broad natural environmental gradients. This supports the emerging use of size-spectra deviations as indicators of fundamental changes to the structure and function of ecological communities.
Collapse
Affiliation(s)
- Justin P F Pomeranz
- Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
| | - James R Junker
- Great Lakes Research Center, Michigan Technological University, Houghton, Michigan, USA
| | - Jeff S Wesner
- Department of Biology, University of South Dakota, Vermillion, South Dakota, USA
| |
Collapse
|
5
|
Fraser KM, Stuart‐Smith RD, Ling SD, Edgar GJ. Small invertebrate consumers produce consistent size spectra across reef habitats and climatic zones. OIKOS 2020. [DOI: 10.1111/oik.07652] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- K. M. Fraser
- Inst. for Marine and Antarctic Studies, Univ. of Tasmania Taroona TAS Australia
| | - R. D. Stuart‐Smith
- Inst. for Marine and Antarctic Studies, Univ. of Tasmania Taroona TAS Australia
| | - S. D. Ling
- Inst. for Marine and Antarctic Studies, Univ. of Tasmania Taroona TAS Australia
| | - G. J. Edgar
- Inst. for Marine and Antarctic Studies, Univ. of Tasmania Taroona TAS Australia
| |
Collapse
|
6
|
Węsławski JM, Legeżyńska J, Włodarska-Kowalczuk M. Will shrinking body size and increasing species diversity of crustaceans follow the warming of the Arctic littoral? Ecol Evol 2020; 10:10305-10313. [PMID: 33072260 PMCID: PMC7548195 DOI: 10.1002/ece3.6780] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Revised: 05/19/2020] [Accepted: 05/21/2020] [Indexed: 11/08/2022] Open
Abstract
Over thirty species of littoral marine Gammaridea occur along the coasts of the North Atlantic. From one to several species can coexist in a single region. There is an evident, inverse relationship between egg incubation time and temperature (from 14 to >120 days) and consequent trends in the size of the animals on reaching maturity (from 5 mm in warmer waters to 30 mm in the coldest ones) and in lifespan (from <6 months to >5 years). Littoral gammarids are a good example of the shrinking size effect of increasing temperatures and size-related species diversity. In large species, the annual cohorts of the population (3-5 annual size groups) functionally replace the adults of smaller species. The ongoing warming of the European Arctic seas may extend the distribution limits of boreal species so that more Gammarus species may appear on northern coasts hitherto occupied by just one or at most two species.
Collapse
|