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Pinheiro SKDP, Pontes MDS, Miguel TBAR, Grillo R, Souza Filho AGD, Miguel EDC. Nanoparticles and plants: A focus on analytical characterization techniques. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 348:112225. [PMID: 39142607 DOI: 10.1016/j.plantsci.2024.112225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 07/05/2024] [Accepted: 08/11/2024] [Indexed: 08/16/2024]
Abstract
Nanotechnology has brought about significant progress through the use of goods based on nanomaterials. However, concerns remain about the accumulation of these materials in the environment and their potential toxicity to living organisms. Plants have the ability to take in nanomaterials (NMs), which can cause changes in their physiology and morphology. On the other hand, nanoparticles (NPs) have been used to increase plant development and control pests in agriculture by including them into agrochemicals. The challenges of the interaction, internalization, and accumulation of NMs within plant tissues are enormous, mainly because of the various characteristics of NMs and the absence of reliable analytical tools. As our knowledge of the interactions between NMs and plant cells expands, we are able to create novel NMs that are tailored, targeted, and designed to be safe, thus minimizing the environmental consequences of nanomaterials. This review provides a thorough examination and comparison of the main microscopy techniques, spectroscopic methods, and far-field super-resolution methodologies used to examine nanomaterials within the cell walls of plants.
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Affiliation(s)
- Sergimar Kennedy de Paiva Pinheiro
- Biomaterials Laboratory, Department of Metallurgical Engineering and Materials and Analytical Center, Federal University of Ceará (UFC), Fortaleza, CE, Brazil
| | - Montcharles da Silva Pontes
- Optics and Photonics Group, SISFOTON Lab, Institute of Physics, Federal University of Mato Grosso do Sul (UFMS), Campo Grande, MS, Brazil
| | | | - Renato Grillo
- Environmental Nanochemistry Group, Department of Physics and Chemistry, São Paulo State University (UNESP), Ilha Solteira, SP, Brazil
| | | | - Emilio de Castro Miguel
- Biomaterials Laboratory, Department of Metallurgical Engineering and Materials and Analytical Center, Federal University of Ceará (UFC), Fortaleza, CE, Brazil.
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Mendová K, Otáhal M, Drab M, Daniel M. Size Matters: Rethinking Hertz Model Interpretation for Cell Mechanics Using AFM. Int J Mol Sci 2024; 25:7186. [PMID: 39000293 PMCID: PMC11241038 DOI: 10.3390/ijms25137186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Revised: 06/17/2024] [Accepted: 06/25/2024] [Indexed: 07/16/2024] Open
Abstract
Cell mechanics are a biophysical indicator of cell state, such as cancer metastasis, leukocyte activation, and cell cycle progression. Atomic force microscopy (AFM) is a widely used technique to measure cell mechanics, where the Young modulus of a cell is usually derived from the Hertz contact model. However, the Hertz model assumes that the cell is an elastic, isotropic, and homogeneous material and that the indentation is small compared to the cell size. These assumptions neglect the effects of the cytoskeleton, cell size and shape, and cell environment on cell deformation. In this study, we investigated the influence of cell size on the estimated Young's modulus using liposomes as cell models. Liposomes were prepared with different sizes and filled with phosphate buffered saline (PBS) or hyaluronic acid (HA) to mimic the cytoplasm. AFM was used to obtain the force indentation curves and fit them to the Hertz model. We found that the larger the liposome, the lower the estimated Young's modulus for both PBS-filled and HA-filled liposomes. This suggests that the Young modulus obtained from the Hertz model is not only a property of the cell material but also depends on the cell dimensions. Therefore, when comparing or interpreting cell mechanics using the Hertz model, it is essential to account for cell size.
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Affiliation(s)
- Katarína Mendová
- Department of Mechanics, Biomechanics and Mechatronics, Faculty of Mechanical Engineering, Czech Technical University in Prague, Technická 4, 16000 Prague, Czech Republic;
| | - Martin Otáhal
- Department of Natural Sciences, Faculty of Biomedical Engineering, Czech Technical University in Prague, Náměstí Sítná 3105, 27201 Kladno, Czech Republic;
| | - Mitja Drab
- Laboratory of Biophysics, Faculty of Electrical Engineering, University of Ljubljana, Trzaska 25, 1000 Ljubljana, Slovenia;
| | - Matej Daniel
- Department of Mechanics, Biomechanics and Mechatronics, Faculty of Mechanical Engineering, Czech Technical University in Prague, Technická 4, 16000 Prague, Czech Republic;
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Delmarre L, Harté E, Devin A, Argoul P, Argoul F. Two-layer elastic models for single-yeast compressibility with flat microlevers. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2024:10.1007/s00249-024-01710-2. [PMID: 38703210 DOI: 10.1007/s00249-024-01710-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 02/14/2024] [Accepted: 03/20/2024] [Indexed: 05/06/2024]
Abstract
Unicellular organisms such as yeast can survive in very different environments, thanks to a polysaccharide wall that reinforces their extracellular membrane. This wall is not a static structure, as it is expected to be dynamically remodeled according to growth stage, division cycle, environmental osmotic pressure and ageing. It is therefore of great interest to study the mechanics of these organisms, but they are more difficult to study than other mammalian cells, in particular because of their small size (radius of a few microns) and their lack of an adhesion machinery. Using flat cantilevers, we perform compression experiments on single yeast cells (S. cerevisiae) on poly-L-lysine-coated grooved glass plates, in the limit of small deformation using an atomic force microscope (AFM). Thanks to a careful decomposition of force-displacement curves, we extract local scaling exponents that highlight the non-stationary characteristic of the yeast behavior upon compression. Our multi-scale nonlinear analysis of the AFM force-displacement curves provides evidence for non-stationary scaling laws. We propose to model these phenomena based on a two-component elastic system, where each layer follows a different scaling law..
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Affiliation(s)
- L Delmarre
- LOMA, Laboratoire Ondes et Matière d'Aquitaine, CNRS, Université de Bordeaux, Talence, France
| | - E Harté
- LOMA, Laboratoire Ondes et Matière d'Aquitaine, CNRS, Université de Bordeaux, Talence, France
| | - A Devin
- IBGC, Institut de Biologie et Génétique Cellulaire, CNRS, Université de Bordeaux, Bordeaux, France
| | - P Argoul
- LVMT, Ecole des Ponts, Université Gustave Eiffel & MAST-EMGCU, Marne la Vallée, France
| | - F Argoul
- LOMA, Laboratoire Ondes et Matière d'Aquitaine, CNRS, Université de Bordeaux, Talence, France.
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Lemière J, Chang F. Quantifying turgor pressure in budding and fission yeasts based upon osmotic properties. Mol Biol Cell 2023; 34:ar133. [PMID: 37903220 PMCID: PMC10848946 DOI: 10.1091/mbc.e23-06-0215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 10/02/2023] [Accepted: 10/11/2023] [Indexed: 11/01/2023] Open
Abstract
Walled cells, such as plants, fungi, and bacteria cells, possess a high internal hydrostatic pressure, termed turgor pressure, that drives volume growth and contributes to cell shape determination. Rigorous measurement of turgor pressure, however, remains challenging, and reliable quantitative measurements, even in budding yeast are still lacking. Here, we present a simple and robust experimental approach to access turgor pressure in yeasts based upon the determination of isotonic concentration using protoplasts as osmometers. We propose three methods to identify the isotonic condition - three-dimensional cell volume, cytoplasmic fluorophore intensity, and mobility of a cytGEMs nano-rheology probe - that all yield consistent values. Our results provide turgor pressure estimates of 1.0 ± 0.1 MPa for Schizosaccharomyces pombe, 0.49 ± 0.01 MPa for Schizosaccharomyces japonicus, 0.5 ± 0.1 MPa for Saccharomyces cerevisiae W303a and 0.31 ± 0.03 MPa for Saccharomyces cerevisiae BY4741. Large differences in turgor pressure and nano-rheology measurements between the Saccharomyces cerevisiae strains demonstrate how fundamental biophysical parameters can vary even among wild-type strains of the same species. These side-by-side measurements of turgor pressure in multiple yeast species provide critical values for quantitative studies on cellular mechanics and comparative evolution.
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Affiliation(s)
- Joël Lemière
- Department of Cell and Tissue Biology, University of California, San Francisco, CA 94143
| | - Fred Chang
- Department of Cell and Tissue Biology, University of California, San Francisco, CA 94143
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Kanahama T, Sato M. Mechanics-based classification rule for plants. Proc Natl Acad Sci U S A 2023; 120:e2308319120. [PMID: 37801474 PMCID: PMC10576094 DOI: 10.1073/pnas.2308319120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2023] [Accepted: 08/28/2023] [Indexed: 10/08/2023] Open
Abstract
The height of thick and solid plants, such as woody plants, is proportional to two-thirds of the power of their diameter at breast height. However, this rule cannot be applied to herbaceous plants that are thin and soft because the mechanisms supporting their bodies are fundamentally different. This study aims to clarify the rigidity control mechanism resulting from turgor pressure caused by internal water in herbaceous plants to formulate the corresponding scaling law. We modeled a herbaceous plant as a cantilever with the ground side as a fixed end, and the greatest height was formulated considering the axial tension force from the turgor pressure. The scaling law describing the relationship between the height and diameter in terms of the turgor pressure was theoretically derived. Moreover, we proposed a plant classification rule based on stress distribution.
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Affiliation(s)
- Tohya Kanahama
- Graduate School of Engineering, Hokkaido University, Sapporo060-8628, Japan
| | - Motohiro Sato
- Faculty of Engineering, Hokkaido University, Sapporo060-8628, Japan
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Lemière J, Chang F. Quantifying turgor pressure in budding and fission yeasts based upon osmotic properties. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.06.07.544129. [PMID: 37333400 PMCID: PMC10274794 DOI: 10.1101/2023.06.07.544129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
Abstract
Walled cells, such as plants, fungi, and bacteria cells, possess a high internal hydrostatic pressure, termed turgor pressure, that drives volume growth and contributes to cell shape determination. Rigorous measurement of turgor pressure, however, remains challenging, and reliable quantitative measurements, even in budding yeast are still lacking. Here, we present a simple and robust experimental approach to access turgor pressure in yeasts based upon the determination of isotonic concentration using protoplasts as osmometers. We propose three methods to identify the isotonic condition - 3D cell volume, cytoplasmic fluorophore intensity, and mobility of a cytGEMs nano-rheology probe - that all yield consistent values. Our results provide turgor pressure estimates of 1.0 ± 0.1 MPa for S. pombe, 0.49 ± 0.01 MPa for S. japonicus, 0.5 ± 0.1 MPa for S. cerevisiae W303a and 0.31 ± 0.03 MPa for S. cerevisiae BY4741. Large differences in turgor pressure and nano-rheology measurements between the S. cerevisiae strains demonstrate how fundamental biophysical parameters can vary even among wildtype strains of the same species. These side-by-side measurements of turgor pressure in multiple yeast species provide critical values for quantitative studies on cellular mechanics and comparative evolution.
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Affiliation(s)
- Joël Lemière
- Department of Cell and Tissue Biology, University of San Francisco, CA, USA
| | - Fred Chang
- Department of Cell and Tissue Biology, University of San Francisco, CA, USA
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Kaur H, Teulon JM, Foucher AE, Fenel D, Chen SWW, Godon C, Desnos T, Pellequer JL. Measuring external primary cell wall elasticity of seedling roots using atomic force microscopy. STAR Protoc 2023; 4:102265. [PMID: 37200196 DOI: 10.1016/j.xpro.2023.102265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/13/2023] [Accepted: 03/31/2023] [Indexed: 05/20/2023] Open
Abstract
Stiffness plays a central action in plant cell extension. Here, we present a protocol to detect changes in stiffness on the external epidermal cell wall of living plant roots using atomic force microscopy (AFM). We provide generalized instructions for collecting force-distance curves and analysis of stiffness using contact-based mechanical model. With this protocol, and some initial training in AFM, a user is able to perform indentation experiments on 4- and 5-day-old Arabidopsis thaliana and determine stiffness properties. For complete details on the use and execution of this protocol, please refer to Godon et al.1.
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Affiliation(s)
| | | | | | - Daphna Fenel
- Univ. Grenoble Alpes, CEA, CNRS, IBS, 38000 Grenoble, France
| | - Shu-Wen W Chen
- Univ. Grenoble Alpes, CEA, CNRS, IBS, 38000 Grenoble, France; Rue Cyprien Jullin, 38470 Vinay, France
| | - Christian Godon
- Aix Marseille Université, CNRS, CEA, Institut de Biosciences et Biotechnologies Aix-Marseille, CEA Cadarache, 13115 Saint-Paul lez-Durance, France
| | - Thierry Desnos
- Aix Marseille Université, CNRS, CEA, Institut de Biosciences et Biotechnologies Aix-Marseille, Equipe Bioénergies et Microalgues, CEA Cadarache, 13115 Saint-Paul-lez-Durance, France.
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Rigidity control mechanism by turgor pressure in plants. Sci Rep 2023; 13:2063. [PMID: 36739460 PMCID: PMC9899264 DOI: 10.1038/s41598-023-29294-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Accepted: 02/02/2023] [Indexed: 02/05/2023] Open
Abstract
The bodies of herbaceous plants are slender, thin, and soft. These plants support their bodies through the action of turgor pressure associated with their internal water stores. The purpose of this study was to apply the principles of structural mechanics to clarify the underlying mechanism of rigidity control that is responsible for turgor pressure in plants and the reason behind the self-supporting ability of herbaceous plants. We modeled a plant a horizontally oriented thin-walled cylindrical cantilever with closed ends enclosing a cavity filled with water that is acted on by its own weight and by internal tension generated through turgor pressure. We derived an equation describing the plant's consequent deflection, introducing a dimensionless parameter to express the decrease in deflection associated with the action of turgor pressure. We found that the mechanical and physical characteristics of herbaceous plants that would appear to be counter-productive from a superficial perspective increase the deflection decreasing effect of turgor pressure.
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Chen SWW, Teulon JM, Kaur H, Godon C, Pellequer JL. Nano-structural stiffness measure for soft biomaterials of heterogeneous elasticity. NANOSCALE HORIZONS 2022; 8:75-82. [PMID: 36314544 DOI: 10.1039/d2nh00390b] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Measuring the structural stiffness aims to reveal the impact of nanostructured components or various physiological circumstances on the elastic response of material to an external indentation. With a pyramidal tip at a nano-scale, we employed the atomic force microscopy (AFM) to indent the surfaces of two compositions of polyacrylamide gels with different softness and seedling roots of Arabidopsis thaliana. We found that the stiffness-depth curve derived from the measured force exhibits a heterogeneous character in elasticity. According to the tendency of stiffness-depth curve, we decomposed the responding force into depth-impact (FC), Hookean (FH) and tip-shape (FS) components, called trimechanic, where FS and its gradient should be offset at the surface or subsurfaces of the indented material. Thereby, trimechnic theory allows us to observe how the three restoring nanomechanics change with varied depth. Their strengths are represented by the respective spring constants (kC, kH, kS) of three parallel-connected spring (3PCS) analogs to differentiate restoring nanomechansims of indented materials. The effective Young's modulus Ê and the total stiffness kT (= kH + kS) globally unambiguously distinguish the softness between the two gel categories. Data fluctuations were observed in the elasticity parameters of individual samples, reflecting nanostructural variations in the gel matrix. Similar tendencies were found in the results from growing plant roots, though the data fluctuations are expectedly much more dramatic. The zone-wise representation of stiffness by the trimechanic-3PCS framework demonstrates a stiffness measure that reflects beneath nanostructures encountered by deepened depth. The trimechanic-3PCS framework can apply any mechanical model of power-law based force-depth relationship and is compatible with thin layer corrections. It provides a new paradigm for analyzing restoring nanomechanics of soft biomaterials in response to indenting forces.
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Affiliation(s)
- Shu-Wen W Chen
- Université Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
- Rue Cyprien Jullin, Vinay, 38470, France
| | - Jean-Marie Teulon
- Université Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
| | - Harinderbir Kaur
- Université Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France.
| | - Christian Godon
- Aix Marseille University, CEA, CNRS, BIAM, 13108 Saint Paul-Lez-Durance, Cadarache, France
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