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Johnsen KA, Cruzado NA, Menard ZC, Willats AA, Charles AS, Markowitz JE, Rozell CJ. Bridging model and experiment in systems neuroscience with Cleo: the Closed-Loop, Electrophysiology, and Optophysiology simulation testbed. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.01.27.525963. [PMID: 39026717 PMCID: PMC11257437 DOI: 10.1101/2023.01.27.525963] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/20/2024]
Abstract
Systems neuroscience has experienced an explosion of new tools for reading and writing neural activity, enabling exciting new experiments such as all-optical or closed-loop control that effect powerful causal interventions. At the same time, improved computational models are capable of reproducing behavior and neural activity with increasing fidelity. Unfortunately, these advances have drastically increased the complexity of integrating different lines of research, resulting in the missed opportunities and untapped potential of suboptimal experiments. Experiment simulation can help bridge this gap, allowing model and experiment to better inform each other by providing a low-cost testbed for experiment design, model validation, and methods engineering. Specifically, this can be achieved by incorporating the simulation of the experimental interface into our models, but no existing tool integrates optogenetics, two-photon calcium imaging, electrode recording, and flexible closed-loop processing with neural population simulations. To address this need, we have developed Cleo: the Closed-Loop, Electrophysiology, and Optophysiology experiment simulation testbed. Cleo is a Python package enabling injection of recording and stimulation devices as well as closed-loop control with realistic latency into a Brian spiking neural network model. It is the only publicly available tool currently supporting two-photon and multi-opsin/wavelength optogenetics. To facilitate adoption and extension by the community, Cleo is open-source, modular, tested, and documented, and can export results to various data formats. Here we describe the design and features of Cleo, validate output of individual components and integrated experiments, and demonstrate its utility for advancing optogenetic techniques in prospective experiments using previously published systems neuroscience models.
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Kaspar C, Ivanenko A, Lehrich J, Klingauf J, Pernice WHP. Biohybrid Photonic Platform for Subcellular Stimulation and Readout of In Vitro Neurons. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2304561. [PMID: 38164885 DOI: 10.1002/advs.202304561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Revised: 12/20/2023] [Indexed: 01/03/2024]
Abstract
Targeted manipulation of neural activity via light has become an indispensable tool for gaining insights into the intricate processes governing single neurons and complex neural networks. To shed light onto the underlying interaction mechanisms, it is crucial to achieve precise control of individual neural activity, as well as a spatial read-out resolution on the nanoscale. Here, a versatile photonic platform with subcellular resolution for stimulation and monitoring of in-vitro neurons is demonstrated. Low-loss photonic waveguides are fabricated on glass substrates using nanoimprint lithography and featuring a loss of only -0.9 ± 0.2 dB cm-1 at 489 nm and are combined with optical fiber-based waveguide-access and backside total internal reflection fluorescence microscopy. Neurons are grown on the bio-functionalized photonic chip surface and, expressing the light-sensitive ion channel Channelrhodopsin-2, are stimulated within the evanescent field penetration depth of 57 nm of the biocompatible waveguides. The versatility and cost-efficiency of the platform, along with the possible subcellular resolution, enable tailor-made investigations of neural interaction dynamics with defined spatial control and high throughput.
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Affiliation(s)
- Corinna Kaspar
- Institute of Physics, University of Muenster, Heisenbergstr. 11, 48149, Muenster, Germany
- Center for Soft Nanoscience, University of Muenster, Busso-Peuss-Str. 10, 48149, Muenster, Germany
| | - Alexander Ivanenko
- Center for Soft Nanoscience, University of Muenster, Busso-Peuss-Str. 10, 48149, Muenster, Germany
- Institute of Medical Physics and Biophysics, University of Muenster, Robert-Koch-Str. 31, 48149, Muenster, Germany
| | - Julia Lehrich
- Center for Soft Nanoscience, University of Muenster, Busso-Peuss-Str. 10, 48149, Muenster, Germany
- Institute of Medical Physics and Biophysics, University of Muenster, Robert-Koch-Str. 31, 48149, Muenster, Germany
| | - Jürgen Klingauf
- Center for Soft Nanoscience, University of Muenster, Busso-Peuss-Str. 10, 48149, Muenster, Germany
- Institute of Medical Physics and Biophysics, University of Muenster, Robert-Koch-Str. 31, 48149, Muenster, Germany
| | - Wolfram H P Pernice
- Institute of Physics, University of Muenster, Heisenbergstr. 11, 48149, Muenster, Germany
- Center for Soft Nanoscience, University of Muenster, Busso-Peuss-Str. 10, 48149, Muenster, Germany
- Kirchhoff-Institut for Physics, Heidelberg University, Im Neuenheimer Feld 227, 69120, Heidelberg, Germany
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Afraz A. Behavioral optogenetics in nonhuman primates; a psychological perspective. CURRENT RESEARCH IN NEUROBIOLOGY 2023; 5:100101. [PMID: 38020813 PMCID: PMC10663131 DOI: 10.1016/j.crneur.2023.100101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 06/02/2023] [Accepted: 06/22/2023] [Indexed: 12/01/2023] Open
Abstract
Optogenetics has been a promising and developing technology in systems neuroscience throughout the past decade. It has been difficult though to reliably establish the potential behavioral effects of optogenetic perturbation of the neural activity in nonhuman primates. This poses a challenge on the future of optogenetics in humans as the concepts and technology need to be developed in nonhuman primates first. Here, I briefly summarize the viable approaches taken to improve nonhuman primate behavioral optogenetics, then focus on one approach: improvements in the measurement of behavior. I bring examples from visual behavior and show how the choice of method of measurement might conceal large behavioral effects. I will then discuss the "cortical perturbation detection" task in detail as an example of a sensitive task that can record the behavioral effects of optogenetic cortical stimulation with high fidelity. Finally, encouraged by the rich scientific landscape ahead of behavioral optogenetics, I invite technology developers to improve the chronically implantable devices designed for simultaneous neural recording and optogenetic intervention in nonhuman primates.
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Affiliation(s)
- Arash Afraz
- Laboratory of Neuropsychology, National Institute of Mental Health, National Institute of Health, Bethesda, Maryland, USA
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Barendrecht S, Schreurs A, Geissler S, Sabanov V, Ilse V, Rieckmann V, Eichentopf R, Künemund A, Hietel B, Wussow S, Hoffmann K, Körber-Ferl K, Pandey R, Carter GW, Demuth HU, Holzer M, Roßner S, Schilling S, Preuss C, Balschun D, Cynis H. A novel human tau knock-in mouse model reveals interaction of Abeta and human tau under progressing cerebral amyloidosis in 5xFAD mice. Alzheimers Res Ther 2023; 15:16. [PMID: 36641439 PMCID: PMC9840277 DOI: 10.1186/s13195-022-01144-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Accepted: 12/14/2022] [Indexed: 01/16/2023]
Abstract
BACKGROUND Hyperphosphorylation and intraneuronal aggregation of the microtubule-associated protein tau is a major pathological hallmark of Alzheimer's disease (AD) brain. Of special interest is the effect of cerebral amyloid beta deposition, the second main hallmark of AD, on human tau pathology. Therefore, studying the influence of cerebral amyloidosis on human tau in a novel human tau knock-in (htau-KI) mouse model could help to reveal new details on their interplay. METHODS We studied the effects of a novel human htau-KI under fast-progressing amyloidosis in 5xFAD mice in terms of correlation of gene expression data with human brain regions, development of Alzheimer's-like pathology, synaptic transmission, and behavior. RESULTS The main findings are an interaction of human beta-amyloid and human tau in crossbred 5xFADxhtau-KI observed at transcriptional level and corroborated by electrophysiology and histopathology. The comparison of gene expression data of the 5xFADxhtau-KI mouse model to 5xFAD, control mice and to human AD patients revealed conspicuous changes in pathways related to mitochondria biology, extracellular matrix, and immune function. These changes were accompanied by plaque-associated MC1-positive pathological tau that required the htau-KI background. LTP deficits were noted in 5xFAD and htau-KI mice in contrast to signs of rescue in 5xFADxhtau-KI mice. Increased frequencies of miniature EPSCs and miniature IPSCs indicated an upregulated presynaptic function in 5xFADxhtau-KI. CONCLUSION In summary, the multiple interactions observed between knocked-in human tau and the 5xFAD-driven progressing amyloidosis have important implications for future model development in AD.
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Affiliation(s)
- Susan Barendrecht
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - An Schreurs
- grid.5596.f0000 0001 0668 7884KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Tiensestraat 102, box 3714, 3000 Leuven, Belgium
| | - Stefanie Geissler
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Victor Sabanov
- grid.5596.f0000 0001 0668 7884KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Tiensestraat 102, box 3714, 3000 Leuven, Belgium
| | - Victoria Ilse
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Vera Rieckmann
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Rico Eichentopf
- grid.5596.f0000 0001 0668 7884KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Tiensestraat 102, box 3714, 3000 Leuven, Belgium
| | - Anja Künemund
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Benjamin Hietel
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Sebastian Wussow
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Katrin Hoffmann
- grid.9018.00000 0001 0679 2801Martin Luther University Halle-Wittenberg, Institute for Human Genetics, Magdeburger Strasse 2, 06112 Halle, Germany
| | - Kerstin Körber-Ferl
- grid.9018.00000 0001 0679 2801Martin Luther University Halle-Wittenberg, Institute for Human Genetics, Magdeburger Strasse 2, 06112 Halle, Germany
| | - Ravi Pandey
- grid.249880.f0000 0004 0374 0039The Jackson Laboratory, 600 Main St, Bar Harbor, ME 04609 USA
| | - Gregory W. Carter
- grid.249880.f0000 0004 0374 0039The Jackson Laboratory, 600 Main St, Bar Harbor, ME 04609 USA
| | - Hans-Ulrich Demuth
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
| | - Max Holzer
- Paul Flechsig Institute for Brain Research, Leipzig University, Liebigstraße 19, 04103 Leipzig, Germany
| | - Steffen Roßner
- Paul Flechsig Institute for Brain Research, Leipzig University, Liebigstraße 19, 04103 Leipzig, Germany
| | - Stephan Schilling
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany ,grid.427932.90000 0001 0692 3664Anhalt University of Applied Sciences, Bernburger Straße 55, 06366 Köthen, Germany
| | - Christoph Preuss
- grid.249880.f0000 0004 0374 0039The Jackson Laboratory, 600 Main St, Bar Harbor, ME 04609 USA
| | - Detlef Balschun
- grid.5596.f0000 0001 0668 7884KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Tiensestraat 102, box 3714, 3000 Leuven, Belgium
| | - Holger Cynis
- grid.418008.50000 0004 0494 3022Department of Drug Design and Target Validation, Fraunhofer Institute for Cell Therapy and Immunology, Weinbergweg 22, 06120 Halle, Germany
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Bayat FK, Alp Mİ, Bostan S, Gülçür HÖ, Öztürk G, Güveniş A. An improved platform for cultured neuronal network electrophysiology: multichannel optogenetics integrated with MEAs. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2022; 51:503-514. [PMID: 35930029 DOI: 10.1007/s00249-022-01613-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 05/11/2022] [Accepted: 07/24/2022] [Indexed: 06/15/2023]
Abstract
Cultured neuronal networks (CNNs) are powerful tools for studying how neuronal representation and adaptation emerge in networks of controlled populations of neurons. To ensure the interaction of a CNN and an artificial setting, reliable operation in both open and closed loops should be provided. In this study, we integrated optogenetic stimulation with microelectrode array (MEA) recordings using a digital micromirror device and developed an improved research tool with a 64-channel interface for neuronal network control and data acquisition. We determined the ideal stimulation parameters including light intensity, frequency, and duty cycle for our configuration. This resulted in robust and reproducible neuronal responses. We also demonstrated both open and closed loop configurations in the new platform involving multiple bidirectional channels. Unlike previous approaches that combined optogenetic stimulation and MEA recordings, we did not use binary grid patterns, but assigned an adjustable-size, non-binary optical spot to each electrode. This approach allowed simultaneous use of multiple input-output channels and facilitated adaptation of the stimulation parameters. Hence, we advanced a 64-channel interface in that each channel can be controlled individually in both directions simultaneously without any interference or interrupts. The presented setup meets the requirements of research in neuronal plasticity, network encoding and representation, closed-loop control of firing rate and synchronization. Researchers who develop closed-loop control techniques and adaptive stimulation strategies for network activity will benefit much from this novel setup.
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Affiliation(s)
- F Kemal Bayat
- Institute of Biomedical Engineering, Bogazici University, Istanbul, Turkey.
| | - M İkbal Alp
- Regenerative and Restorative Medicine Research Center (REMER), Research Institute for Health Sciences and Technologies (SABITA), Istanbul Medipol University, Istanbul, Turkey
| | - Sevginur Bostan
- Regenerative and Restorative Medicine Research Center (REMER), Research Institute for Health Sciences and Technologies (SABITA), Istanbul Medipol University, Istanbul, Turkey
| | - H Özcan Gülçür
- Institute of Biomedical Engineering, Bogazici University, Istanbul, Turkey
| | - Gürkan Öztürk
- Regenerative and Restorative Medicine Research Center (REMER), Research Institute for Health Sciences and Technologies (SABITA), Istanbul Medipol University, Istanbul, Turkey
| | - Albert Güveniş
- Institute of Biomedical Engineering, Bogazici University, Istanbul, Turkey
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de Lamotte JD, Polentes J, Roussange F, Lesueur L, Feurgard P, Perrier A, Nicoleau C, Martinat C. Optogenetically controlled human functional motor endplate for testing botulinum neurotoxins. Stem Cell Res Ther 2021; 12:599. [PMID: 34865655 PMCID: PMC8647380 DOI: 10.1186/s13287-021-02665-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Accepted: 11/18/2021] [Indexed: 11/19/2022] Open
Abstract
Background The lack of physiologically relevant and predictive cell-based assays is one of the major obstacles for testing and developing botulinum neurotoxins (BoNTs) therapeutics. Human-induced pluripotent stem cells (hiPSCs)-derivatives now offer the opportunity to improve the relevance of cellular models and thus the translational value of preclinical data. Methods We investigated the potential of hiPSC-derived motor neurons (hMNs) optical stimulation combined with calcium imaging in cocultured muscle cells activity to investigate BoNT-sensitivity of an in vitro model of human muscle-nerve system. Results Functional muscle-nerve coculture system was developed using hMNs and human immortalized skeletal muscle cells. Our results demonstrated that hMNs can innervate myotubes and induce contractions and calcium transient in muscle cells, generating an in vitro human motor endplate showing dose-dependent sensitivity to BoNTs intoxication. The implementation of optogenetics combined with live calcium imaging allows to monitor the impact of BoNTs intoxication on synaptic transmission in human motor endplate model. Conclusions Altogether, our findings demonstrate the promise of optogenetically hiPSC-derived controlled muscle-nerve system for pharmaceutical BoNTs testing and development. Supplementary Information The online version contains supplementary material available at 10.1186/s13287-021-02665-3.
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Affiliation(s)
- Juliette Duchesne de Lamotte
- IPSEN Innovation, 5 avenue du Canada, 91940, Les Ulis, France.,Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France
| | - Jérôme Polentes
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France
| | - Florine Roussange
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France
| | - Léa Lesueur
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France
| | - Pauline Feurgard
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France
| | - Anselme Perrier
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France.,Laboratoire Des Maladies Neurodégénératives: Mécanismes, thérapies, imagerie, Université Paris Saclay/CEA/CNRS UMR9199, MIRCen, Bâtiment 61, CEA-Fontenay-Aux-Roses, 18 route du Panorama, 92265, Fontenay-aux-Roses, France
| | | | - Cécile Martinat
- Université Evry-Paris Saclay/INSERM UMR861, Institut Des Cellules Souches Pour Le Traitement Et L'étude Des Maladies Monogéniques (I-Stem), 2 rue Henri Auguste Desbruères, 91100, Corbeil-Essonne, France.
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Abstract
There are many cases in which the separation of different sources from single channel recordings is important, for example, in fluorescence spectral overlap compensation, electrical impedance signaling, intramuscular electromyogram decomposition or in the case of spike sorting of neuron potentials from microelectrode arrays (MEA). Focusing on the latter, the problem can be faced by identifying spikes emerging from the background and clustering into different groups, indicating the activity of different neurons. Problems are found when more spikes are superimposed in overlapped waveforms. We discuss the application of Biogeography-Based Optimization (BBO) to resolve this specific problem. Our algorithm is compared with three spike-sorting methods (SpyKING Circus, Common Basis Pursuit and Klusta), showing statistically better performance (in terms of F1 score, True Positive Rate—TPR and Positive Predictive Value—PPV) in resolving overlaps in realistic, simulated data. Specifically, BBO showed median F1, TPR and PPV of 100%, 100% and about 75%, respectively, considering a simulated noise with the same spectral density as the experimental one and a similar power with highly statistically significant improvements of at least two performance indexes over each of the other three tested algorithms.
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A drivable optrode for use in chronic electrophysiology and optogenetic experiments. J Neurosci Methods 2020; 348:108979. [PMID: 33096153 PMCID: PMC10174211 DOI: 10.1016/j.jneumeth.2020.108979] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Revised: 09/21/2020] [Accepted: 10/13/2020] [Indexed: 11/21/2022]
Abstract
BACKGROUND Combining optogenetic tools with behaving electrophysiology is a powerful approach for investigating the neural mechanisms underlying behavior. A traditional approach to ensure viable recordings during chronic long-term electrophysiological experiments is the use of drivable electrodes. However, few options exist for drivable optrodes. NEW METHOD Here, we describe the design and construction of an economical drivable optrode for chronic experiments in behaving rodents, which allows for the simultaneous photo-stimulation and recording of distinct neuronal populations. RESULTS We demonstrate the utility of the drivable optrode by recording light-evoked modulation in awake behaving rats over multiple recording sessions and across different depths. Using a virus to drive expression of channelrhodopsin-2 (ChR2) in the anterior piriform cortex, the drivable optrode was used to record consistent light-evoked modulation of neural activity in the gustatory cortex during photo-activation of the axonal projections from anterior piriform cortex in behaving rats. COMPARISON WITH EXISTING METHODS Although sophisticated optrodes have been developed, many are expensive, unmodifiable, require advanced engineering techniques, and/or lack drivability. The drivable optrode uses relatively inexpensive materials, requires no machined parts, and can be fabricated with tools available in most labs. In addition, it can be easily modified to accommodate different experimental parameters. CONCLUSION In summary, we believe that the cost-effective and relatively simple-to-prepare design makes this drivable optrode a practical option for researchers using optogenetic and electrophysiological tools to investigate network and circuit function.
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Chen K, Lam S, Kozai TDY. What directions of improvements in electrode designs should we expect in the next 5-10 years? BIOELECTRONICS IN MEDICINE 2019; 2:119-122. [PMID: 32440363 PMCID: PMC7226723 DOI: 10.2217/bem-2019-0023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2019] [Accepted: 12/11/2019] [Indexed: 11/21/2022]
Affiliation(s)
- Keying Chen
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15260, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh & Carnegie Mellon University, Pittsburgh, PA 15213, USA
| | - Stephanie Lam
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15260, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh & Carnegie Mellon University, Pittsburgh, PA 15213, USA
| | - Takashi DY Kozai
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15260, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh & Carnegie Mellon University, Pittsburgh, PA 15213, USA
- Center for Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260, USA
- McGowan Institute of Regenerative Medicine, University of Pittsburgh, Pittsburgh, PA 15219, USA
- NeuroTech Center, University of Pittsburgh Brain Institute, Pittsburgh, PA 15260, USA
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Matarèse BFE, Feyen PLC, de Mello JC, Benfenati F. Sub-millisecond Control of Neuronal Firing by Organic Light-Emitting Diodes. Front Bioeng Biotechnol 2019; 7:278. [PMID: 31750295 PMCID: PMC6817475 DOI: 10.3389/fbioe.2019.00278] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2019] [Accepted: 10/03/2019] [Indexed: 12/13/2022] Open
Abstract
Optogenetics combines optics and genetics to enable minimally invasive cell-type-specific stimulation in living tissue. For the purposes of bio-implantation, there is a need to develop soft, flexible, transparent and highly biocompatible light sources. Organic semiconducting materials have key advantages over their inorganic counterparts, including low Young's moduli, high strain resistances, and wide color tunability. However, until now it has been unclear whether organic light emitting diodes (OLEDs) are capable of providing sufficient optical power for successful neuronal stimulation, while still remaining within a biologically acceptable temperature range. Here we investigate the use of blue polyfluorene- and orange poly(p-phenylenevinylene)-based OLEDs as stimuli for blue-light-activated Sustained Step Function Opsin (SFFO) and red-light-activated ChrimsonR opsin, respectively. We show that, when biased using high frequency (multi-kHz) drive schemes, the OLEDs permit safe and controlled photostimulation of opsin-expressing neurons and were able to control neuronal firing with high temporal-resolution at operating temperatures lower than previously demonstrated.
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Affiliation(s)
- Bruno F. E. Matarèse
- Department of Chemistry, Imperial College London, South Kensington Campus, London, United Kingdom
| | - Paul L. C. Feyen
- Center for Synaptic Neuroscience and Technology, Istituto Italiano di Tecnologia, Genoa, Italy
- Section of Physiology, Department of Experimental Medicine, University of Genova, Genoa, Italy
| | - John C. de Mello
- Department of Chemistry, Imperial College London, South Kensington Campus, London, United Kingdom
- Centre for Organic Electronic Materials, Department of Chemistry, Trondheim, Norway
| | - Fabio Benfenati
- Center for Synaptic Neuroscience and Technology, Istituto Italiano di Tecnologia, Genoa, Italy
- IRCCS Ospedale Policlinico San Martino, Genoa, Italy
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Miccoli B, Lopez CM, Goikoetxea E, Putzeys J, Sekeri M, Krylychkina O, Chang SW, Firrincieli A, Andrei A, Reumers V, Braeken D. High-Density Electrical Recording and Impedance Imaging With a Multi-Modal CMOS Multi-Electrode Array Chip. Front Neurosci 2019; 13:641. [PMID: 31293372 PMCID: PMC6603149 DOI: 10.3389/fnins.2019.00641] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Accepted: 06/04/2019] [Indexed: 01/11/2023] Open
Abstract
Multi-electrode arrays, both active or passive, emerged as ideal technologies to unveil intricated electrophysiological dynamics of cells and tissues. Active MEAs, designed using complementary metal oxide semiconductor technology (CMOS), stand over passive devices thanks to the possibility of achieving single-cell resolution, the reduced electrode size, the reduced crosstalk and the higher functionality and portability. Nevertheless, most of the reported CMOS MEA systems mainly rely on a single operational modality, which strongly hampers the applicability range of a single device. This can be a limiting factor considering that most biological and electrophysiological dynamics are often based on the synergy of multiple and complex mechanisms acting from different angles on the same phenomena. Here, we designed a CMOS MEA chip with 16,384 titanium nitride electrodes, 6 independent operational modalities and 1,024 parallel recording channels for neuro-electrophysiological studies. Sixteen independent active areas are patterned on the chip surface forming a 4 × 4 matrix, each one including 1,024 electrodes. Electrodes of four different sizes are present on the chip surface, ranging from 2.5 × 3.5 μm2 up to 11 × 11.0 μm2, with 15 μm pitch. In this paper, we exploited the impedance monitoring and voltage recording modalities not only to monitor the growth and development of primary rat hippocampal neurons, but also to assess their electrophysiological activity over time showing a mean spike amplitude of 144.8 ± 84.6 μV. Fixed frequency (1 kHz) and high sampling rate (30 kHz) impedance measurements were used to evaluate the cellular adhesion and growth on the chip surface. Thanks to the high-density configuration of the electrodes, as well as their dimension and pitch, the chip can appreciate the evolutions of the cell culture morphology starting from the moment of the seeding up to mature culture conditions. The measurements were confirmed by fluorescent staining. The effect of the different electrode sizes on the spike amplitudes and noise were also discussed. The multi-modality of the presented CMOS MEA allows for the simultaneous assessment of different physiological properties of the cultured neurons. Therefore, it can pave the way both to answer complex fundamental neuroscience questions as well as to aid the current drug-development paradigm.
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12
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Abstract
Neural recording electrode technologies have contributed considerably to neuroscience by enabling the extracellular detection of low-frequency local field potential oscillations and high-frequency action potentials of single units. Nevertheless, several long-standing limitations exist, including low multiplexity, deleterious chronic immune responses and long-term recording instability. Driven by initiatives encouraging the generation of novel neurotechnologies and the maturation of technologies to fabricate high-density electronics, novel electrode technologies are emerging. Here, we provide an overview of recently developed neural recording electrode technologies with high spatial integration, long-term stability and multiple functionalities. We describe how these emergent neurotechnologies can approach the ultimate goal of illuminating chronic brain activity with minimal disruption of the neural environment, thereby providing unprecedented opportunities for neuroscience research in the future.
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Affiliation(s)
- Guosong Hong
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA
- Department of Materials Science and Engineering, Stanford University, Stanford, CA, USA
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA
| | - Charles M Lieber
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
- Center for Brain Science, Harvard University, Cambridge, MA, USA.
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
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13
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Kundu A, Nattoo C, Fremgen S, Springer S, Ausaf T, Rajaraman S. Optimization of makerspace microfabrication techniques and materials for the realization of planar, 3D printed microelectrode arrays in under four days. RSC Adv 2019; 9:8949-8963. [PMID: 35517709 PMCID: PMC9062012 DOI: 10.1039/c8ra09116a] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2018] [Accepted: 03/11/2019] [Indexed: 12/24/2022] Open
Abstract
Conventional two-dimensional microelectrode arrays (2D MEAs) in the market involve long manufacturing timeframes, have cleanroom requirements, and need to be assembled from multiple parts to obtain the final packaged device. For MEAs to be “used and tossed”, manufacturing has to be moved from the cleanroom to makerspaces. In order to enable makerspace fabricated MEAs comparable to conventional MEAs, the microfabrication processes must be optimized to have similar electrical properties along with biocompatibility and number of recording sites. This work presents a makerspace microfabricated 2D MEA having electrode densities up to a commercially popular 8 × 8 array, all fabricated under four days. Additive manufacturing-based realization of the MEA devices provides immense flexibility in terms of meeting distinct design requirements. A unique non-planar MEA having meso-scale electrodes on the top side of a chip transitioning to traces onto the bottom side through electrical vias is presented in this work. This allows for (a) monolithic integration of a culture well for devices having up to a 6 × 6 MEA array, (b) selective electroplating of the meso-scale electrodes (500 μm diameter) defined by silver ink casting followed by pulsed electroplating of gold or platinum without any masking procedure, (c) casting of a uniform and planar insulation layer via a novel process of confined precision spin coating (CPSC) of SU-8 which acts as a biocompatible insulation atop the meso-scale electrodes; and (d) selective laser micromachining to define the 50 μm × 50 μm microelectrodes. For an 8 × 8 array, the culture well and MEA chip framework are 3D printed as two separate parts and sealed together with a biocompatible epoxy as in commercially available MEAs. The fabricated MEAs have an average 1 kHz impedance of 36.8 kΩ/16 kΩ with a double layer capacitance of 400 nF cm−2/520 nF cm−2 for nano-porous platinum/nano-gold which is comparable to the state-of-art commercially available 2D MEAs. Additionally, it was found out that our 3D printing-based process compares very favorably with traditional glass MEAs in terms of design to device while representing a dramatic reduction in cost, timeline for fabrication, reduction in the number of steps and the need for sophisticated microfabrication and packaging equipment. “Makerspace microfabrication” with the use of simple tools and materials is used to demonstrate the realization of 2D microelectrode arrays (MEAs) having a density of up to 8 × 8 MEAs in under four days which are comparable to conventional MEAs.![]()
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Affiliation(s)
- Avra Kundu
- NanoScience Technology Center (NSTC)
- University of Central Florida
- Orlando
- USA
| | - Crystal Nattoo
- Department of Electrical and Computer Engineering
- University of Miami
- Coral Gables
- USA
| | - Sarah Fremgen
- NanoScience Technology Center (NSTC)
- University of Central Florida
- Orlando
- USA
| | - Sandra Springer
- NanoScience Technology Center (NSTC)
- University of Central Florida
- Orlando
- USA
| | - Tariq Ausaf
- NanoScience Technology Center (NSTC)
- University of Central Florida
- Orlando
- USA
- Department of Electrical & Computer Engineering
| | - Swaminathan Rajaraman
- NanoScience Technology Center (NSTC)
- University of Central Florida
- Orlando
- USA
- Department of Electrical & Computer Engineering
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14
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Buccino AP, Kordovan M, Ness TV, Merkt B, Häfliger PD, Fyhn M, Cauwenberghs G, Rotter S, Einevoll GT. Combining biophysical modeling and deep learning for multielectrode array neuron localization and classification. J Neurophysiol 2018; 120:1212-1232. [PMID: 29847231 DOI: 10.1152/jn.00210.2018] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
Neural circuits typically consist of many different types of neurons, and one faces a challenge in disentangling their individual contributions in measured neural activity. Classification of cells into inhibitory and excitatory neurons and localization of neurons on the basis of extracellular recordings are frequently employed procedures. Current approaches, however, need a lot of human intervention, which makes them slow, biased, and unreliable. In light of recent advances in deep learning techniques and exploiting the availability of neuron models with quasi-realistic three-dimensional morphology and physiological properties, we present a framework for automatized and objective classification and localization of cells based on the spatiotemporal profiles of the extracellular action potentials recorded by multielectrode arrays. We train convolutional neural networks on simulated signals from a large set of cell models and show that our framework can predict the position of neurons with high accuracy, more precisely than current state-of-the-art methods. Our method is also able to classify whether a neuron is excitatory or inhibitory with very high accuracy, substantially improving on commonly used clustering techniques. Furthermore, our new method seems to have the potential to separate certain subtypes of excitatory and inhibitory neurons. The possibility of automatically localizing and classifying all neurons recorded with large high-density extracellular electrodes contributes to a more accurate and more reliable mapping of neural circuits. NEW & NOTEWORTHY We propose a novel approach to localize and classify neurons from their extracellularly recorded action potentials with a combination of biophysically detailed neuron models and deep learning techniques. Applied to simulated data, this new combination of forward modeling and machine learning yields higher performance compared with state-of-the-art localization and classification methods.
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Affiliation(s)
- Alessio P Buccino
- Center for Integrative Neuroplasticity (CINPLA), Faculty of Mathematics and Natural Sciences, University of Oslo , Oslo , Norway.,Department of Bioengineering, University of California , San Diego, California
| | - Michael Kordovan
- Bernstein Center Freiburg , Freiburg , Germany.,Faculty of Biology, University of Freiburg , Freiburg , Germany
| | - Torbjørn V Ness
- Faculty of Science and Technology, Norwegian University of Life Sciences, Ås, Norway
| | - Benjamin Merkt
- Bernstein Center Freiburg , Freiburg , Germany.,Faculty of Biology, University of Freiburg , Freiburg , Germany
| | - Philipp D Häfliger
- Center for Integrative Neuroplasticity (CINPLA), Faculty of Mathematics and Natural Sciences, University of Oslo , Oslo , Norway
| | - Marianne Fyhn
- Center for Integrative Neuroplasticity (CINPLA), Faculty of Mathematics and Natural Sciences, University of Oslo , Oslo , Norway
| | - Gert Cauwenberghs
- Department of Bioengineering, University of California , San Diego, California
| | - Stefan Rotter
- Bernstein Center Freiburg , Freiburg , Germany.,Faculty of Biology, University of Freiburg , Freiburg , Germany
| | - Gaute T Einevoll
- Center for Integrative Neuroplasticity (CINPLA), Faculty of Mathematics and Natural Sciences, University of Oslo , Oslo , Norway.,Faculty of Science and Technology, Norwegian University of Life Sciences, Ås, Norway
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15
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Optical fiber tips for biological applications: From light confinement, biosensing to bioparticles manipulation. Biochim Biophys Acta Gen Subj 2018; 1862:1209-1246. [DOI: 10.1016/j.bbagen.2018.02.008] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2017] [Revised: 01/26/2018] [Accepted: 02/13/2018] [Indexed: 12/15/2022]
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16
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Pauwelyn T, Stahl R, Mayo L, Zheng X, Lambrechts A, Janssens S, Lagae L, Reumers V, Braeken D. Reflective lens-free imaging on high-density silicon microelectrode arrays for monitoring and evaluation of in vitro cardiac contractility. BIOMEDICAL OPTICS EXPRESS 2018; 9:1827-1841. [PMID: 29675322 PMCID: PMC5905926 DOI: 10.1364/boe.9.001827] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Revised: 01/16/2018] [Accepted: 02/05/2018] [Indexed: 06/08/2023]
Abstract
The high rate of drug attrition caused by cardiotoxicity is a major challenge for drug development. Here, we developed a reflective lens-free imaging (RLFI) approach to non-invasively record in vitro cell deformation in cardiac monolayers with high temporal (169 fps) and non-reconstructed spatial resolution (352 µm) over a field-of-view of maximally 57 mm2. The method is compatible with opaque surfaces and silicon-based devices. Further, we demonstrated that the system can detect the impairment of both contractility and fast excitation waves in cardiac monolayers. Additionally, the RLFI device was implemented on a CMOS-based microelectrode array to retrieve multi-parametric information of cardiac cells, thereby offering more in-depth analysis of drug-induced (cardiomyopathic) effects for preclinical cardiotoxicity screening applications.
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Affiliation(s)
- Thomas Pauwelyn
- Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200D, 3001 Leuven, Belgium
- imec, Kapeldreef 75, 3001 Leuven, Belgium
| | | | - Lakyn Mayo
- Institute for NanoBioTechnology, Johns Hopkins University, 3400 N. Charles St., Baltimore, MD 21218, USA
| | - Xuan Zheng
- imec, Kapeldreef 75, 3001 Leuven, Belgium
| | | | - Stefan Janssens
- Department of Cardiovascular Sciences, KU Leuven, UZ Herestraat 49, 3001 Leuven, Belgium
| | - Liesbet Lagae
- Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200D, 3001 Leuven, Belgium
- imec, Kapeldreef 75, 3001 Leuven, Belgium
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17
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Libbrecht S, Hoffman L, Welkenhuysen M, Van den Haute C, Baekelandt V, Braeken D, Haesler S. Proximal and distal modulation of neural activity by spatially confined optogenetic activation with an integrated high-density optoelectrode. J Neurophysiol 2018; 120:149-161. [PMID: 29589813 DOI: 10.1152/jn.00888.2017] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Optogenetic manipulations are widely used for investigating the contribution of genetically identified cell types to behavior. Simultaneous electrophysiological recordings are less common, although they are critical for characterizing the specific impact of optogenetic manipulations on neural circuits in vivo. This is at least in part because combining photostimulation with large-scale electrophysiological recordings remains technically challenging, which also poses a limitation for performing extracellular identification experiments. Currently available interfaces that guide light of the appropriate wavelength into the brain combined with an electrophysiological modality suffer from various drawbacks such as a bulky size, low spatial resolution, heat dissipation, or photovoltaic artifacts. To address these challenges, we have designed and fabricated an integrated ultrathin neural interface with 12 optical outputs and 24 electrodes. We used the device to measure the effect of localized stimulation in the anterior olfactory cortex, a paleocortical structure involved in olfactory processing. Our experiments in adult mice demonstrate that because of its small dimensions, our novel tool causes far less tissue damage than commercially available devices. Moreover, optical stimulation and recording can be performed simultaneously, with no measurable electrical artifact during optical stimulation. Importantly, optical stimulation can be confined to small volumes with approximately single-cortical layer thickness. Finally, we find that even highly localized optical stimulation causes inhibition at more distant sites. NEW & NOTEWORTHY In this study, we establish a novel tool for simultaneous extracellular recording and optogenetic photostimulation. Because the device is built using established microchip technology, it can be fabricated with high reproducibility and reliability. We further show that even very localized stimulation affects neural firing far beyond the stimulation site. This demonstrates the difficulty in predicting circuit-level effects of optogenetic manipulations and highlights the importance of closely monitoring neural activity in optogenetic experiments.
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Affiliation(s)
- Sarah Libbrecht
- Laboratory for Neurobiology and Gene Therapy, Department of Neurosciences, KU Leuven, Leuven , Belgium
| | - Luis Hoffman
- Life Science Technologies and Imaging Department, Imec, Leuven , Belgium.,Neuroelectronics Research Flanders, Leuven , Belgium
| | | | - Chris Van den Haute
- Laboratory for Neurobiology and Gene Therapy, Department of Neurosciences, KU Leuven, Leuven , Belgium
| | - Veerle Baekelandt
- Laboratory for Neurobiology and Gene Therapy, Department of Neurosciences, KU Leuven, Leuven , Belgium
| | - Dries Braeken
- Life Science Technologies and Imaging Department, Imec, Leuven , Belgium
| | - Sebastian Haesler
- Research Group Neurophysiology, Department of Neurosciences, KU Leuven, Leuven , Belgium.,VIB, Leuven , Belgium.,Neuroelectronics Research Flanders, Leuven , Belgium
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18
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Serruya MD, Harris JP, Adewole DO, Struzyna LA, Burrell JC, Nemes A, Petrov D, Kraft RH, Chen HI, Wolf JA, Cullen DK. Engineered Axonal Tracts as "Living Electrodes" for Synaptic-Based Modulation of Neural Circuitry. ADVANCED FUNCTIONAL MATERIALS 2018; 28:1701183. [PMID: 34045935 PMCID: PMC8152180 DOI: 10.1002/adfm.201701183] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Brain-computer interface and neuromodulation strategies relying on penetrating non-organic electrodes/optrodes are limited by an inflammatory foreign body response that ultimately diminishes performance. A novel "biohybrid" strategy is advanced, whereby living neurons, biomaterials, and microelectrode/optical technology are used together to provide a biologically-based vehicle to probe and modulate nervous-system activity. Microtissue engineering techniques are employed to create axon-based "living electrodes", which are columnar microstructures comprised of neuronal population(s) projecting long axonal tracts within the lumen of a hydrogel designed to chaperone delivery into the brain. Upon microinjection, the axonal segment penetrates to prescribed depth for synaptic integration with local host neurons, with the perikaryal segment remaining externalized below conforming electrical-optical arrays. In this paradigm, only the biological component ultimately remains in the brain, potentially attenuating a chronic foreign-body response. Axon-based living electrodes are constructed using multiple neuronal subtypes, each with differential capacity to stimulate, inhibit, and/or modulate neural circuitry based on specificity uniquely afforded by synaptic integration, yet ultimately computer controlled by optical/electrical components on the brain surface. Current efforts are assessing the efficacy of this biohybrid interface for targeted, synaptic-based neuromodulation, and the specificity, spatial density and long-term fidelity versus conventional microelectronic or optical substrates alone.
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Affiliation(s)
- Mijail D Serruya
- Department of Neurology, Thomas Jefferson University, Philadelphia, PA 19107, USA
| | - James P Harris
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - Dayo O Adewole
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA; Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Laura A Struzyna
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA; Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Justin C Burrell
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - Ashley Nemes
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - Dmitriy Petrov
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - Reuben H Kraft
- Computational Biomechanics Group, Department of Mechanical & Nuclear Engineering, Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16801, USA
| | - H Isaac Chen
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - John A Wolf
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
| | - D Kacy Cullen
- Center for Brain Injury & Repair, Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neurotrauma, Neurodegeneration & Restoration, Corporal Michael J. Crescenz Veterans Affairs Medical Center, Philadelphia, PA 19104, USA
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19
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Prox J, Smith T, Holl C, Chehade N, Guo L. Integrated biocircuits: engineering functional multicellular circuits and devices. J Neural Eng 2018; 15:023001. [DOI: 10.1088/1741-2552/aaa906] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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20
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Zeck G, Jetter F, Channappa L, Bertotti G, Thewes R. Electrical Imaging: Investigating Cellular Function at High Resolution. ACTA ACUST UNITED AC 2017; 1:e1700107. [DOI: 10.1002/adbi.201700107] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2017] [Revised: 07/27/2017] [Indexed: 12/26/2022]
Affiliation(s)
- Günther Zeck
- Neurophysics, Natural and Medical Sciences Institute at the University Tübingen; 72770 Reutlingen Germany
| | - Florian Jetter
- Neurophysics, Natural and Medical Sciences Institute at the University Tübingen; 72770 Reutlingen Germany
| | - Lakshmi Channappa
- Neurophysics, Natural and Medical Sciences Institute at the University Tübingen; 72770 Reutlingen Germany
| | - Gabriel Bertotti
- Chair of Sensor and Actuator Systems; Technical University of Berlin; 10587 Berlin Germany
| | - Roland Thewes
- Chair of Sensor and Actuator Systems; Technical University of Berlin; 10587 Berlin Germany
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21
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Schreurs A, Sabanov V, Balschun D. Distinct Properties of Long-Term Potentiation in the Dentate Gyrus along the Dorsoventral Axis: Influence of Age and Inhibition. Sci Rep 2017; 7:5157. [PMID: 28698637 PMCID: PMC5506024 DOI: 10.1038/s41598-017-05358-1] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Accepted: 05/26/2017] [Indexed: 02/07/2023] Open
Abstract
The hippocampus is important for spatial navigation, episodic memory and affective behaviour. Increasing evidence suggests that these multiple functions are accomplished by different segments along the dorsal-ventral (septal-temporal) axis. Long-term potentiation (LTP), the best-investigated cellular correlate of learning and memory, has distinct properties along this axis in the CA1 region, but so far, little is known about longitudinal differences in dentate gyrus (DG). Therefore, here we examined potential dorsoventral differences in DG-LTP using in vitro multi-electrode array recordings. In young mice, we found higher basal synaptic transmission in the dorsal DG, while the LTP magnitude markedly increased towards the ventral pole. Strikingly, these differences were greatly reduced in slices from middle-aged mice. Short-term plasticity, evaluated by paired-pulse ratios, was similar across groups. Recordings in the presence and absence of GABAA-receptor blocker picrotoxin suggested a higher inhibitory tone in the ventral DG of young mice, confirmed by an increased frequency of miniature inhibitory postsynaptic currents. Our findings support the view that the hippocampus contains discrete functional domains along its dorsoventral axis and demonstrate that these are subject to age-dependent changes. Since these characteristics are presumably conserved in the human hippocampus, our findings have important clinical implications for hippocampus- and age-related disorders.
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Affiliation(s)
- An Schreurs
- KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Laboratory of Biological Psychology, Leuven, Belgium
| | - Victor Sabanov
- KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Laboratory of Biological Psychology, Leuven, Belgium
| | - Detlef Balschun
- KU Leuven, Faculty of Psychology and Educational Sciences, Brain & Cognition, Laboratory of Biological Psychology, Leuven, Belgium.
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