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Milita S, Zaquin T, Fermani S, Montroni D, Pinkas I, Barba L, Falini G, Mass T. Assembly of the Intraskeletal Coral Organic Matrix during Calcium Carbonate Formation. CRYSTAL GROWTH & DESIGN 2023; 23:5801-5811. [PMID: 37547884 PMCID: PMC10401569 DOI: 10.1021/acs.cgd.3c00401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Revised: 07/01/2023] [Indexed: 08/08/2023]
Abstract
Scleractinia coral skeleton formation occurs by a heterogeneous process of nucleation and growth of aragonite in which intraskeletal soluble organic matrix molecules, usually referred to as SOM, play a key role. Several studies have demonstrated that they influence the shape and polymorphic precipitation of calcium carbonate. However, the structural aspects that occur during the growth of aragonite have received less attention. In this research, we study the deposition of calcium carbonate on a model substrate, silicon, in the presence of SOM extracted from the skeleton of two coral species representative of different living habitats and colonization strategies, which we previously characterized. The study is performed mainly by grazing incidence X-ray diffraction with the support of Raman spectroscopy and electron and optical microscopies. The results show that SOM macromolecules once adsorbed on the substrate self-assembled in a layered structure and induced the oriented growth of calcite, inhibiting the formation of vaterite. Differently, when SOM macromolecules were dispersed in solution, they induced the deposition of amorphous calcium carbonate (ACC), still preserving a layered structure. The entity of these effects was species-dependent, in agreement with previous studies. In conclusion, we observed that in the setup required by the experimental procedure, the SOM from corals appears to present a 2D lamellar structure. This structure is preserved when the SOM interacts with ACC but is lost when the interaction occurs with calcite. This knowledge not only is completely new for coral biomineralization but also has strong relevance in the study of biomineralization on other organisms.
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Affiliation(s)
- Silvia Milita
- CNR—Institute
for Microelectronic and Microsystems, via Gobetti 101, Bologna 40129, Italy
| | - Tal Zaquin
- Department
of Marine Biology, The Leon H. Charney School of Marine Sciences, University of Haifa, Mt. Carmel, Haifa 3498838, Israel
| | - Simona Fermani
- Department
of Chemistry “Giacomo Ciamician”, University of Bologna, via Selmi 2, Bologna 40126, Italy
- Interdepartmental
Centre for Industrial Research Health Sciences & Technologie, University of Bologna, Bologna 40064, Italy
| | - Devis Montroni
- Department
of Chemistry “Giacomo Ciamician”, University of Bologna, via Selmi 2, Bologna 40126, Italy
| | - Iddo Pinkas
- Department
of Chemical Research Support, Weizmann Institute
of Science, Rehovot 76100, Israel
| | - Luisa Barba
- CNR
-Institute
of Crystallography, Elettra Synchrotron, Trieste I-34100, Italy
| | - Giuseppe Falini
- Department
of Chemistry “Giacomo Ciamician”, University of Bologna, via Selmi 2, Bologna 40126, Italy
- CNR,
Institute for Nanostructured
Materials, via Gobetti
101, Bologna 40129, Italy
| | - Tali Mass
- Department
of Marine Biology, The Leon H. Charney School of Marine Sciences, University of Haifa, Mt. Carmel, Haifa 3498838, Israel
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Colon S, Paige A, Bolarinho R, Young H, Gerdon AE. Secondary Structure of DNA Aptamer Influences Biomimetic Mineralization of Calcium Carbonate. ACS APPLIED MATERIALS & INTERFACES 2023; 15:6274-6282. [PMID: 36715729 PMCID: PMC9924263 DOI: 10.1021/acsami.2c15626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 01/22/2023] [Indexed: 06/18/2023]
Abstract
Calcium materials, such as calcium carbonate, are produced in natural and industrial settings that range from oceanic to biomedical. An array of biological and biomimetic template molecules have been employed in controlling and understanding the mineralization reaction but have largely focused on small molecule additives or disordered polyelectrolytes. DNA aptamers are synthetic and programmable biomolecules with polyelectrolyte characteristics but with predictable and controllable secondary structure akin to native extracellular moieties. This work demonstrates for the first time the influence of DNA aptamers with known G-quadruplex structures on calcium carbonate mineralization. Aptamers demonstrate kinetic inhibition of mineral formation, sequence and pH-dependent uptake into the mineral, and morphological control of the primarily calcite material in controlled solution conditions. In reactions initiated from the complex matrix of ocean water, DNA aptamers demonstrated enhancement of mineralization kinetics and resulting amorphous material. This work provides new biomimetic tools to employ in controlled mineralization and demonstrates the influence that template secondary structure can have in material formation.
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Affiliation(s)
| | | | - Rylie Bolarinho
- Department of Chemistry and
Physics, Emmanuel College, 400 The Fenway, Boston, Massachusetts 02115, United States
| | - Hailey Young
- Department of Chemistry and
Physics, Emmanuel College, 400 The Fenway, Boston, Massachusetts 02115, United States
| | - Aren E Gerdon
- Department of Chemistry and
Physics, Emmanuel College, 400 The Fenway, Boston, Massachusetts 02115, United States
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3
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Goh CY, Baldini L, Casnati A, Jones F, Mocerino M, Ogden MI, Sansone F, Ungaro R. Upper-rim acidic peptidocalixarenes as crystal growth modifiers. Supramol Chem 2014. [DOI: 10.1080/10610278.2014.891738] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Ching Yong Goh
- Department of Chemistry, Curtin University, GPO Box U 1987, Perth 6845, Australia
| | - Laura Baldini
- Dipartimento di Chimica, Università degli Studi di Parma, Parco Area delle Scienze 17/a, 43124 Parma, Italy
| | - Alessandro Casnati
- Dipartimento di Chimica, Università degli Studi di Parma, Parco Area delle Scienze 17/a, 43124 Parma, Italy
| | - Franca Jones
- Department of Chemistry, Curtin University, GPO Box U 1987, Perth 6845, Australia
| | - Mauro Mocerino
- Department of Chemistry, Curtin University, GPO Box U 1987, Perth 6845, Australia
| | - Mark I. Ogden
- Department of Chemistry, Curtin University, GPO Box U 1987, Perth 6845, Australia
| | - Francesco Sansone
- Dipartimento di Chimica, Università degli Studi di Parma, Parco Area delle Scienze 17/a, 43124 Parma, Italy
| | - Rocco Ungaro
- Dipartimento di Chimica, Università degli Studi di Parma, Parco Area delle Scienze 17/a, 43124 Parma, Italy
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Water amount dependence on morphologies and properties of ZnO nanostructures in double-solvent system. Sci Rep 2014; 4:3736. [PMID: 24435133 PMCID: PMC3894549 DOI: 10.1038/srep03736] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2013] [Accepted: 12/16/2013] [Indexed: 11/08/2022] Open
Abstract
ZnO materials with a range of different morphologies have been successfully synthesized via a simple double-solvothermal method in the presence of glycine. The morphologies of the products can be controlled from superstructures to microrods by adjusting the amount of water in the EtOH/H2O system. Photoluminescence (PL) studies reveal that the more amount of water was used, the stronger PL relative intensity of the green emission is, but the weaker ultraviolet emission. This might be attributed to the more defects of the products when the more water was used. The catalytic studies show that all the samples have good abilities to decrease decomposition temperature around 300°C and the decomposition temperature lowers with the increase of the relative intensity of ZnO green emission.
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Hao W, Porter D, Wang X, Shao Z. Silk fibroin-mediated biomineralization of calcium carbonate at the air/water interface. CrystEngComm 2014. [DOI: 10.1039/c4ce01092b] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The morphology and polymorphs of CaCO3 that crystallized at the air/water interface depend on the assembly of silk fibroin therein.
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Affiliation(s)
- Wei Hao
- State Key Laboratory of Molecular Engineering of Polymers
- Advanced Materials Laboratory
- Department of Macromolecular Science
- Fudan University
- Shanghai, People's Republic of China
| | - David Porter
- Department of Zoology
- University of Oxford
- Oxford OX1 3PS, UK
| | - Xianting Wang
- State Key Laboratory of Molecular Engineering of Polymers
- Advanced Materials Laboratory
- Department of Macromolecular Science
- Fudan University
- Shanghai, People's Republic of China
| | - Zhengzhong Shao
- State Key Laboratory of Molecular Engineering of Polymers
- Advanced Materials Laboratory
- Department of Macromolecular Science
- Fudan University
- Shanghai, People's Republic of China
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Nudelman F, Sommerdijk NAJM. Biomineralisation als Inspirationsquelle für die Materialchemie. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201106715] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Nudelman F, Sommerdijk NAJM. Biomineralization as an inspiration for materials chemistry. Angew Chem Int Ed Engl 2012; 51:6582-96. [PMID: 22639420 DOI: 10.1002/anie.201106715] [Citation(s) in RCA: 301] [Impact Index Per Article: 25.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2011] [Revised: 01/19/2012] [Indexed: 11/06/2022]
Abstract
Living organisms are well known for building a wide range of specially designed organic-inorganic hybrid materials such as bone, teeth, and shells, which are highly sophisticated in terms of their adaptation to function. This has inspired physicists, chemists, and materials scientists to mimic such structures and their properties. In this Review we describe how strategies used by nature to build and tune the properties of biominerals have been applied to the synthesis of materials for biomedical, industrial, and technological purposes. Bio-inspired approaches such as molecular templating, supramolecular templating, organized surfaces, and phage display as well as methods to replicate the structure and function of biominerals are discussed. We also show that the application of in situ techniques to study and visualize the bio-inspired materials is of paramount importance to understand, control, and optimize their preparation. Biominerals are synthesized in aqueous media under ambient conditions, and these approaches can lead to materials with a reduced ecological footprint than can traditional methods.
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Affiliation(s)
- Fabio Nudelman
- Laboratory of Materials and Interface Chemistry and Soft Matter CryoTEM Unit, Eindhoven University of Technology, P. O. Box 513, 5600 MB, Eindhoven, The Netherlands
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Stripe B, Uysal A, Lin B, Meron M, Dutta P. Charge, stereochemistry, or epitaxy? Toward controlled biomimetic nucleation at mixed monolayer templates. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:572-578. [PMID: 22077377 DOI: 10.1021/la2037422] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Floating monolayer mixtures of cationic dioctadecyldimethyldiammonium bromide and anionic lipids were used as variable templates for the biomimetic nucleation of calcium carbonate and studied using grazing incidence X-ray diffraction. Varying the ratio of constituents changes the monolayer charge, structure, and molecular tilt. The nucleating surface of calcite also changes as the mixture is varied, and at an 80:20 ratio the (012) face is seen under a floating monolayer template for the first time. Our results indicate that the average template lattice is the major controlling factor in the oriented nucleation of CaCO(3). This is in contrast to the current view that the orientation is controlled by the stereochemical matching of the terminal functional group and molecular tilt with respect to the carbonate groups in the crystal.
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Affiliation(s)
- Ben Stripe
- Department of Physics & Astronomy, Northwestern University, Evanston, Illinois 60201, United States
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9
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Nielsen MH, Lee JRI, Hu Q, Yong-Jin Han T, De Yoreo JJ. Structural evolution, formation pathways and energetic controls during template-directed nucleation of CaCO3. Faraday Discuss 2012. [DOI: 10.1039/c2fd20050c] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Campi G, Mari A, Amenitsch H, Pifferi A, Cannas C, Suber L. Monitoring early stages of silver particle formation in a polymer solution by in situ and time resolved small angle X-ray scattering. NANOSCALE 2010; 2:2447-2455. [PMID: 20938556 DOI: 10.1039/c0nr00390e] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Silver particles have been prepared by reduction of silver nitrate with ascorbic acid in acidic aqueous solution containing a low concentration of a commercial polynaphthalene sulfonate polymer (Daxad 19) as dispersant agent. The reduction has been induced and controlled by the slow addition of ascorbic acid at a fixed rate; in this way, we were able to monitor the formation of a silver crystalline colloidal dispersion by in situ and time resolved Small Angle X-ray Scattering measurements. Modeling the scattering intensity with interacting spherical particles in a polymer-Ag like-fractal template allowed us to distinguish different stages involving liquid-like ordered cluster nucleation, cluster growth up to primary particle formation and particle coalescence. Between primary particle formation and particle coalescence, we observed the occurrence of a transient phase of core-shell type structures having primary particles as stable cores in expanding shells built by the organic polymer. We discuss these results in a twofold perspective pertaining both to technology, relative to controlled fabrication of metal nanoparticles and to basic chemical physics, dealing with non standard stepwise crystallization from solutions.
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Affiliation(s)
- Gaetano Campi
- CNR-Istituto di Cristallografia, Via Salaria, Km 29.300, Monterotondo Stazione, RM I-00015, Italy.
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Lee S, Sanstead PJ, Wiener JM, Bebawee R, Hilario AG. Effect of specific anion on templated crystal nucleation at the liquid-liquid interface. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2010; 26:9556-64. [PMID: 20158277 DOI: 10.1021/la1001557] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
In this work, we have investigated the effect of potassium salts of different anions upon the crystal nucleation of K(2)SO(4) as interfacially templated by a surfactant monolayer of 1-octadecylamine (ODA), in an aqueous microdroplet system bounded by a liquid-liquid interface with 1-decanol. The salts used were K(2)HPO(4), KCl, KBr, KI, KNO(3), and KSCN, present at an initial concentration of 10 mM within an aqueous microdroplet containing K(2)SO(4) at an initial concentration of 287 mM. Supersaturation and subsequent crystallization were isothermally induced by droplet dissolution into the dehydrating decanol phase. The K(2)SO(4) solute crystallization behavior was studied by measurement of the calculated concentration of the solute in the microdroplet at the onset of crystallization, i.e., at the first perceptible microscopic appearance of a solid phase, and by crystal habit. Certain salts, e.g., K(2)HPO(4), had almost no influence on the templating ability of ODA, while the ability of ODA to template nucleation and direct the formation of regular crystal habit of K(2)SO(4) became appreciably disrupted in the presence of more chaotropic anions, such as SCN(-) or NO(3)(-). The propensity for anions to disrupt crystal templating was clearly seen to follow a Hofmeister trend. For crystallization events induced in the absence of ODA, however, these added salts had no influence on the outcome of the events. Microdroplets bounded by an ODA monolayer were also found to undergo droplet shrinkage into the surrounding dehydrating phase at a rate which generally depended upon the nature of the anion in the droplet, with chaotropic anions having an apparent effect of promoting shrinkage. Our findings suggest that the packing or ordering of an ODA monolayer at a liquid-liquid interface is strongly influenced by an interaction between anions in the aqueous phase and the surfactant monolayer at the liquid-liquid interface, which is manifested in its effect upon the crystal templating behavior. These intriguing results can have important implications for the understanding of biomineralization processes which occur in heterogeneous environments.
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Affiliation(s)
- Sunghee Lee
- Department of Chemistry, Iona College, New Rochelle, New York 10801, USA.
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13
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Uysal A, Stripe B, Kim K, Dutta P. Epitaxy driven interactions at the organic–inorganic interface during biomimetic growth of calcium oxalate. CrystEngComm 2010. [DOI: 10.1039/b926751d] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Dey A, de With G, Sommerdijk NAJM. In situ techniques in biomimetic mineralization studies of calcium carbonate. Chem Soc Rev 2010; 39:397-409. [DOI: 10.1039/b811842f] [Citation(s) in RCA: 99] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15
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Cho S, Jeong H, Park DH, Jung SH, Kim HJ, Lee KH. The effects of vitamin C on ZnO crystal formation. CrystEngComm 2010. [DOI: 10.1039/b916750a] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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16
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Gower LB. Biomimetic model systems for investigating the amorphous precursor pathway and its role in biomineralization. Chem Rev 2008; 108:4551-627. [PMID: 19006398 PMCID: PMC3652400 DOI: 10.1021/cr800443h] [Citation(s) in RCA: 612] [Impact Index Per Article: 38.3] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Laurie B Gower
- Department of Materials Science & Engineering, University of Florida, 210A Rhines Hall, Gainesville, Florida 32611, USA.
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17
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Sommerdijk NAJM, With GD. Biomimetic CaCO3 Mineralization using Designer Molecules and Interfaces. Chem Rev 2008; 108:4499-550. [DOI: 10.1021/cr078259o] [Citation(s) in RCA: 369] [Impact Index Per Article: 23.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Nico A. J. M. Sommerdijk
- Soft-matter cryoTEM Research Unit and Laboratory of Materials and Interface Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| | - Gijsbertus de With
- Soft-matter cryoTEM Research Unit and Laboratory of Materials and Interface Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven, The Netherlands
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18
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Vos MR, Bomans PH, Frederik PM, Sommerdijk NA. The development of a glove-box/Vitrobot combination: Air–water interface events visualized by cryo-TEM. Ultramicroscopy 2008; 108:1478-83. [DOI: 10.1016/j.ultramic.2008.03.014] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2007] [Accepted: 03/28/2008] [Indexed: 11/25/2022]
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Pichon BP, Bomans PHH, Frederik PM, Sommerdijk NAJM. A Quasi-Time-Resolved CryoTEM Study of the Nucleation of CaCO3under Langmuir Monolayers. J Am Chem Soc 2008; 130:4034-40. [DOI: 10.1021/ja710416h] [Citation(s) in RCA: 81] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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