1
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Zhang T, Shou L, Yang K, Long Y, Chen L, Wang H, Chen J. Insight into the high-temperature oxidation kinetics of acetylene: A first-principles molecular dynamics study. JOURNAL OF HAZARDOUS MATERIALS 2024; 466:133613. [PMID: 38301439 DOI: 10.1016/j.jhazmat.2024.133613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 01/10/2024] [Accepted: 01/23/2024] [Indexed: 02/03/2024]
Abstract
The study on high-temperature oxidation kinetics and kinetic modeling of acetylene (C2H2) has significant importance for its engineering applications. In this paper, the first-principles molecular dynamics method is used to simulate the C2H2 oxidation under high temperatures for the first time. Our results show that there are 38 intermediates and 225 elementary reactions in the process of C2H2 oxidation. The formation mechanisms of "prompt" CO2, as well as gas pollutants CHOCHO and HCOOH are revealed in depth. Four intermediates, CHCHO, CHOCO, CHOCHO and HCOOH, which have significant controversy in current kinetic models, are verified. And a new intermediate, CHOCO2, is discovered. Meanwhile, our simulation also shows that radicals, such as HO2, OH, O, etc. play a key role in promoting the oxidation of intermediates in the early stage of C2H2 oxidation. Combined with quantum chemical calculations, a detailed chemical kinetic model of C2H2/air (FP-C2H2) is built and verified by simulating ignition delay time, species concentration in the flow reactor and premixed laminar flame speed. Our studies provide novel insight for understanding the complex chemical reaction kinetics, and environmental and human health threats from air pollutant formation during C2H2 combustion.
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Affiliation(s)
- Teng Zhang
- Beijing Institute of Technology, Beijing 100081, China
| | - Liefeng Shou
- Beijing Institute of Technology, Beijing 100081, China; Northwest Institute of Nuclear Technology, Xi'an 710024, China
| | - Kun Yang
- Beijing Institute of Technology, Beijing 100081, China.
| | - Yao Long
- Laboratory of Computational Physics, Institute of Applied Physics and Computational Mathematics, Beijing 100088, China
| | - Lang Chen
- Beijing Institute of Technology, Beijing 100081, China
| | - Hongliang Wang
- Northwest Institute of Nuclear Technology, Xi'an 710024, China
| | - Jun Chen
- Laboratory of Computational Physics, Institute of Applied Physics and Computational Mathematics, Beijing 100088, China; HEDPS, Center for Applied Physics and Technology, and College of Engineering, Peking University, Beijing 100871, China.
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2
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Seal P, Barua S, Iyer S, Kumar A, Rissanen M. A systematic study on the kinetics of H-shift reactions in pristine acyl peroxy radicals. Phys Chem Chem Phys 2023; 25:28205-28212. [PMID: 37823187 PMCID: PMC10599409 DOI: 10.1039/d3cp01833d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 09/08/2023] [Indexed: 10/13/2023]
Abstract
A series of acyl peroxy radical H-shifts were systematically studied using computational approaches. Acyl peroxy radicals were categorized into small- (ethanal-pentanal), medium- (hexanal and heptanal) and large-sized (octanal and nonanal) molecules. The H-shifts spanning from 1,4 to 1,9 were inspected for each studied system. For all acyl peroxy radicals, it is the combination of barrier heights and quantum mechanical tunneling that explains the yield of the peracid alkyl radical product. We used the ROHF-ROCCSD(T)-F12a/VDZ-F12//ωB97X-D/aug-cc-pVTZ level of theory to estimate the barrier heights and the subsequent rate coefficients with the exception of the smallest acyl peroxy radical ethanal, for which MN15 density functional was applied. The estimated multiconformer H-shift rate coefficients were found to be in the range of 10-2 s-1 to 10-1 s-1 for the fastest H-migrations. The determined rates imply that these H-shift reactions are often competitive with other RO2 loss processes and should be considered as a path to functionalization in modelling not only rural but also urban air quality.
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Affiliation(s)
- Prasenjit Seal
- Aerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland.
| | - Shawon Barua
- Aerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland.
| | - Siddharth Iyer
- Aerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland.
| | - Avinash Kumar
- Aerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland.
| | - Matti Rissanen
- Aerosol Physics Laboratory, Physics Unit, Tampere University, 33720 Tampere, Finland.
- Department of Chemistry, University of Helsinki, P. O. Box 55, FI-00014, Helsinki, Finland
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3
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Lockhart JPA, Bodipati B, Rizvi S. Investigating the Association Reactions of HOCH 2CO and HOCHCHO with O 2: A Quantum Computational and Master Equation Study. J Phys Chem A 2023; 127:4302-4316. [PMID: 37146175 DOI: 10.1021/acs.jpca.2c08163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Glycolaldehyde, HOCH2CHO, is an important multifunctional atmospheric trace gas formed in the oxidation of ethylene and isoprene and emitted directly from burning biomass. The initial step in the atmospheric photooxidation of HOCH2CHO yields HOCH2CO and HOCHCHO radicals; both of these radicals react rapidly with O2 in the troposphere. This study presents a comprehensive theoretical investigation of the HOCH2CO + O2 and HOCHCHO + O2 reactions using high-level quantum chemical calculations and energy-grained master equation simulations. The HOCH2CO + O2 reaction results in the formation of a HOCH2C(O)O2 radical, while the HOCHCHO + O2 reaction yields (HCO)2 + HO2. Density functional theory calculations have identified two open unimolecular pathways associated with the HOCH2C(O)O2 radical that yield HCOCOOH + OH or HCHO + CO2 + OH products; the former novel bimolecular product pathway has not been previously reported in the literature. Master equation simulations based on the potential energy surface calculated here for the HOCH2CO + O2 recombination reaction support experimental product yield data from the literature and indicate that, even at total pressures of 1 atm, the HOCH2CO + O2 reaction yields ∼11% OH at 298 K.
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Affiliation(s)
- J P A Lockhart
- Department of Chemistry, Adelphi University, One South Avenue, Garden City, New York 11530, United States
| | - B Bodipati
- Department of Chemistry, Adelphi University, One South Avenue, Garden City, New York 11530, United States
| | - S Rizvi
- Department of Chemistry, Adelphi University, One South Avenue, Garden City, New York 11530, United States
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4
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Rong P, Yanchu L, Nianchun G, Qi L, Xianyong L. Glyoxal-induced disruption of tumor cell progression in breast cancer. Mol Clin Oncol 2023; 18:26. [PMID: 36908974 PMCID: PMC9993443 DOI: 10.3892/mco.2023.2622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 10/08/2021] [Indexed: 02/17/2023] Open
Abstract
Breast cancer is the most common malignant tumor in women and remains a major global challenge, with ~1.4 million cases per year, worldwide. Numerous studies have shown that changes in cell metabolism are associated with the regulation of tumor progression. In the present study, the anti-cancer properties of glyoxal (GO), which is the smallest dialdehyde formed in the oxidation-reduction reaction and involved in electron transfer and energy metabolism, in breast cancer was investigated. The biological functions and molecular mechanisms of GO were investigated in breast cancer cell lines using MTT and crystal violet assays, flow cytometry, western blot analysis, 3D laser scanning confocal microscopy and transmission electron microscopy. The results showed that GO strongly inhibited cell proliferation, promoted cell apoptosis and cell cycle G2/M arrest, induced the disappearance of cellular microvilli, and enlarged mitochondria. In addition, the protein expression level of AKT, mTOR and p70-S6K decreased in the AKT-mTOR pathway, accompanied by an increase in p-ERK and p-MEK in the MAPK pathway. The results from the present study indicate that GO suppressed breast cancer progression via the MAPK and AKT-mTOR pathways. Taken together, these results provide the basis for a potential therapeutic strategy for breast cancer.
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Affiliation(s)
- Pu Rong
- Department of Oncology, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China.,Department of Research, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China
| | - Li Yanchu
- Department of Head and Neck Oncology, West China Hospital of Sichuan University, Chengdu, Sichuan 610041, P.R. China
| | - Guo Nianchun
- Department of Research, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China
| | - Li Qi
- Department of Research, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China
| | - Li Xianyong
- Department of Oncology, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China.,Department of Research, Chengdu Fuxing Hospital, Chengdu, Sichuan 610037, P.R. China
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5
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Unknown Knowns: Case studies in uncertainties in the computation of thermochemical parameters. Chem Phys 2021. [DOI: 10.1016/j.chemphys.2021.111251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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6
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Møller KH, Berndt T, Kjaergaard HG. Atmospheric Autoxidation of Amines. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:11087-11099. [PMID: 32786344 DOI: 10.1021/acs.est.0c03937] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Autoxidation has been acknowledged as a major oxidation pathway in a broad range of atmospherically important compounds including isoprene, monoterpenes, and very recently, dimethyl sulfide. Here, we present a high-level theoretical multiconformer transition-state theory study of the atmospheric autoxidation in amines exemplified by the atmospherically important trimethylamine (TMA) and dimethylamine and generalized by the study of the larger diethylamine. Overall, we find that the initial hydrogen shift reactions have rate coefficients greater than 0.1 s-1 and autoxidation is thus an important atmospheric pathway for amines. This autoxidation efficiently leads to the formation of hydroperoxy amides, a new type of atmospheric nitrogen-containing compounds, and for TMA, we experimentally confirm this. The conversion of amines to hydroperoxy amides may have important implications for nucleation and growth of atmospheric secondary organic aerosols and atmospheric OH recycling.
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Affiliation(s)
- Kristian H Møller
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Torsten Berndt
- Atmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstraße 15, 04318 Leipzig, Germany
| | - Henrik G Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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7
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Lu XW, Jiang LX, Liu J, Yang Y, Liu QY, Ren Y, Li X, He SG. Sensitive Detection of Gas-Phase Glyoxal by Electron Attachment Reaction Ionization Mass Spectrometry. Anal Chem 2019; 91:12688-12695. [PMID: 31538775 DOI: 10.1021/acs.analchem.9b02029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Glyoxal (GLY) acts as a key contributor to tropospheric ozone production and secondary organic aerosol (SOA) formation on local to regional scales. The detection of GLY provides useful indicators of fast photochemistry occurring in the lower troposphere. The fast and sensitive detection of GLY is thus important, while traditional chemical ionization such as the proton-transfer reaction (PTR) is extremely limited by the poor detection limit and extensive fragmentation. To address these limitations, electron attachment reaction (EAR) ionization was applied to detect GLY. The generation of parent anions (GLY-) without fragmentation was observed, and cryogenic photoelectron imaging spectroscopy further characterized the structure of GLY-. The detection limit was estimated to be as low as (52 ± 1) pptv (parts per trillion by volume) with 1 min measurements. Other components in ambient air, such as water, carbon dioxide, and trace gases (acetone, propanal, etc.) have no effect on the detection of GLY. The EAR ionization is more promising than PTR ionization in detecting GLY. The detection of GLY in ambient air by the EAR ionization has been demonstrated.
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Affiliation(s)
- Xue-Wei Lu
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China.,University of Chinese Academy of Sciences , Beijing 100049 , P. R. China.,Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center of Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Li-Xue Jiang
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China.,University of Chinese Academy of Sciences , Beijing 100049 , P. R. China.,Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center of Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Jingwei Liu
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Engineering , Peking University , Beijing 100871 , P. R. China
| | - Yiming Yang
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Engineering , Peking University , Beijing 100871 , P. R. China
| | - Qing-Yu Liu
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China.,Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center of Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Yi Ren
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China.,University of Chinese Academy of Sciences , Beijing 100049 , P. R. China.,Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center of Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Xin Li
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Engineering , Peking University , Beijing 100871 , P. R. China
| | - Sheng-Gui He
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China.,University of Chinese Academy of Sciences , Beijing 100049 , P. R. China.,Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center of Excellence in Molecular Sciences , Beijing 100190 , P. R. China
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8
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Haddad M, Perrotte M, Khedher MRB, Demongin C, Lepage A, Fülöp T, Ramassamy C. Methylglyoxal and Glyoxal as Potential Peripheral Markers for MCI Diagnosis and Their Effects on the Expression of Neurotrophic, Inflammatory and Neurodegenerative Factors in Neurons and in Neuronal Derived-Extracellular Vesicles. Int J Mol Sci 2019; 20:ijms20194906. [PMID: 31623327 PMCID: PMC6801730 DOI: 10.3390/ijms20194906] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Revised: 09/14/2019] [Accepted: 09/23/2019] [Indexed: 12/29/2022] Open
Abstract
Methylglyoxal (MG) and glyoxal (GO) are suggested to be associated with the development of neurodegenerative pathologies. However, their peripheral levels in relation to cognitive decline and their effects on key factors in neuronal cells are poorly investigated. The aim of this study was to determine their serum levels in MCI (mild cognitive impairment) and Alzheimer’s disease (AD) patients, to analyze their effects on the neurotrophic and inflammatory factors, on neurodegenerative markers in neuronal cells and in neuronal derived-extracellular vesicles (nEVs). Our results show that MG and GO levels in serum, determined by HPLC, were higher in MCI. ROC (receiver-operating characteristic curves) analysis showed that the levels of MG in serum have higher sensitivity to differentiate MCI from controls but not from AD. Meanwhile, serum GO levels differentiate MCI from control and AD groups. Cells and nEVs levels of BDNF, PRGN, NSE, APP, MMP-9, ANGPTL-4, LCN2, PTX2, S100B, RAGE, Aβ peptide, pTau T181 and alpha-synuclein were quantified by luminex assay. Treatment of neuronal cells with MG or GO reduced the cellular levels of NSE, PRGN, APP, MMP-9 and ANGPTL-4 and the nEVs levels of BDNF, PRGN and LCN2. Our findings suggest that targeting MG and GO may be a promising therapeutic strategy to prevent or delay the progression of AD.
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Affiliation(s)
- Mohamed Haddad
- Institut National de Recherche Scientifique - Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
- Institute on Nutrition and Functional Foods, Laval University, Quebec City, QC G1V 0A6, Canada.
| | - Morgane Perrotte
- Institut National de Recherche Scientifique - Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
- Institute on Nutrition and Functional Foods, Laval University, Quebec City, QC G1V 0A6, Canada.
| | - Mohamed Raâfet Ben Khedher
- Institut National de Recherche Scientifique - Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
- Institute on Nutrition and Functional Foods, Laval University, Quebec City, QC G1V 0A6, Canada.
| | - Clément Demongin
- Institut National de Recherche Scientifique - Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
| | - Aurélie Lepage
- Department of Medicine, Geriatric Division, Research Center on Aging, Sherbrooke University, Sherbrooke, QC J1H 4C4, Canada.
| | - Tamás Fülöp
- Department of Medicine, Geriatric Division, Research Center on Aging, Sherbrooke University, Sherbrooke, QC J1H 4C4, Canada.
| | - Charles Ramassamy
- Institut National de Recherche Scientifique - Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
- Institute on Nutrition and Functional Foods, Laval University, Quebec City, QC G1V 0A6, Canada.
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9
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Stönner C, Derstroff B, Klüpfel T, Crowley JN, Williams J. Glyoxal measurement with a proton transfer reaction time of flight mass spectrometer (PTR-TOF-MS): characterization and calibration. JOURNAL OF MASS SPECTROMETRY : JMS 2017; 52:30-35. [PMID: 27712005 PMCID: PMC6681138 DOI: 10.1002/jms.3893] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Revised: 08/20/2016] [Accepted: 10/05/2016] [Indexed: 05/03/2023]
Abstract
We examine the potential for PTR-TOF-MS systems to quantitatively measure glyoxal in ambient air by characterizing the response of the instrument to a dilute glyoxal sample, calibrating the system as a function of humidity. The concentration of glyoxal in a sample air-stream was measured with an UV absorption spectrometer in parallel to a PTR-TOF-MS. This calibration demonstrated that the PTR-TOF-MS has a relatively low sensitivity to glyoxal particularly at high humidity. Extensive fragmentation of glyoxal to formaldehyde was observed. This behaviour not only desensitizes PTR-MS system to glyoxal; it may also pose a problem to the quantification of formaldehyde. © 2016 The Authors. Journal of Mass Spectrometry Published by John Wiley & Sons Ltd.
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10
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Howes NUM, Lockhart JPA, Blitz MA, Carr SA, Baeza-Romero MT, Heard DE, Shannon RJ, Seakins PW, Varga T. Observation of a new channel, the production of CH 3, in the abstraction reaction of OH radicals with acetaldehyde. Phys Chem Chem Phys 2016; 18:26423-26433. [PMID: 27711478 DOI: 10.1039/c6cp03970g] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Using laser flash photolysis coupled to photo-ionization time-of-flight mass spectrometry (PIMS), methyl radicals (CH3) have been detected as primary products from the reaction of OH radicals with acetaldehyde (ethanal, CH3CHO) with a yield of ∼15% at 1-2 Torr of helium bath gas. Supporting measurements based on laser induced fluorescence studies of OH recycling in the OH/CH3CHO/O2 system are consistent with the PIMS study. Master equation calculations suggest that the origin of the methyl radicals is from prompt dissociation of chemically activated acetyl products and hence is consistent with previous studies which have shown that abstraction, rather than addition/elimination, is the sole route for the OH + acetaldehyde reaction. However, the observation of a significant methyl product yield suggests that energy partitioning in the reaction is different from the typical early barrier mechanism where reaction exothermicity is channeled preferentially into the newly formed bond. The master equation calculations predict atmospheric yields of methyl radicals of ∼9%. The implications of the observations in atmospheric and combustion chemistry are briefly discussed.
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Affiliation(s)
- Neil U M Howes
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
| | | | - Mark A Blitz
- National Centre for Atmospheric Science, University of Leeds, Leeds, LS2 9JT, UK
| | - Scott A Carr
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
| | | | - Dwayne E Heard
- National Centre for Atmospheric Science, University of Leeds, Leeds, LS2 9JT, UK
| | - Robin J Shannon
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
| | - Paul W Seakins
- National Centre for Atmospheric Science, University of Leeds, Leeds, LS2 9JT, UK
| | - T Varga
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
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11
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Shannon RJ, Robertson SH, Blitz MA, Seakins PW. Bimolecular reactions of activated species: An analysis of problematic HC(O)C(O) chemistry. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.08.055] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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12
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Faßheber N, Friedrichs G, Marshall P, Glarborg P. Glyoxal Oxidation Mechanism: Implications for the Reactions HCO + O2 and OCHCHO + HO2. J Phys Chem A 2015; 119:7305-15. [DOI: 10.1021/jp512432q] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Nancy Faßheber
- Institute
of Physical Chemistry, Christian-Albrechts-Universität Kiel, Max-Eyth-Str. 1, 24118 Kiel, Germany
| | - Gernot Friedrichs
- Institute
of Physical Chemistry, Christian-Albrechts-Universität Kiel, Max-Eyth-Str. 1, 24118 Kiel, Germany
| | - Paul Marshall
- Department
of Chemistry and Center for Advanced Scientific Computing and Modeling
(CASCaM), University of North Texas, 1155 Union Circle #305070, Denton, Texas 76203−5017, United States
| | - Peter Glarborg
- Department
of Chemical and Biochemical Engineering, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark
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13
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Rissanen MP, Kurtén T, Sipilä M, Thornton JA, Kausiala O, Garmash O, Kjaergaard HG, Petäjä T, Worsnop DR, Ehn M, Kulmala M. Effects of Chemical Complexity on the Autoxidation Mechanisms of Endocyclic Alkene Ozonolysis Products: From Methylcyclohexenes toward Understanding α-Pinene. J Phys Chem A 2015; 119:4633-50. [DOI: 10.1021/jp510966g] [Citation(s) in RCA: 83] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Matti P. Rissanen
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Theo Kurtén
- Department of Chemistry, University of Helsinki, P.O. Box 55, 00014 Helsinki, Finland
| | - Mikko Sipilä
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Joel A. Thornton
- Department of Atmospheric
Sciences, University of Washington, Seattle, Washington 98195, United States
| | - Oskari Kausiala
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Olga Garmash
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken
5, 2100 Copenhagen
Ø, Denmark
| | - Tuukka Petäjä
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Douglas R. Worsnop
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
- Department of Applied Physics, University of Eastern Finland, 70211 Kuopio, Finland
- Aerodyne Research Inc., 45 Manning Road, Billerica, Massachusetts 01821, United States
| | - Mikael Ehn
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
| | - Markku Kulmala
- Department of Physics, University of Helsinki, P.O. Box 64, 00014 Helsinki, Finland
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14
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Pfeifle M, Olzmann M. Consecutive Chemical Activation Steps in the OH-Initiated Atmospheric Degradation of Isoprene: An Analysis with Coupled Master Equations. INT J CHEM KINET 2014. [DOI: 10.1002/kin.20849] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Mark Pfeifle
- Institut für Physikalische Chemie; Karlsruher Institut für Technologie; 76131 Karlsruhe Germany
| | - Matthias Olzmann
- Institut für Physikalische Chemie; Karlsruher Institut für Technologie; 76131 Karlsruhe Germany
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15
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Lockhart J, Blitz M, Heard D, Seakins P, Shannon R. Kinetic Study of the OH + Glyoxal Reaction: Experimental Evidence and Quantification of Direct OH Recycling. J Phys Chem A 2013; 117:11027-37. [DOI: 10.1021/jp4076806] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- James Lockhart
- School
of Chemistry, University of Leeds, Leeds LS2 9JT, U.K
| | - Mark Blitz
- School
of Chemistry, University of Leeds, Leeds LS2 9JT, U.K
- National
Centre for Atmospheric Science, University of Leeds, Leeds LS2 9JT, U.K
| | - Dwayne Heard
- School
of Chemistry, University of Leeds, Leeds LS2 9JT, U.K
- National
Centre for Atmospheric Science, University of Leeds, Leeds LS2 9JT, U.K
| | - Paul Seakins
- School
of Chemistry, University of Leeds, Leeds LS2 9JT, U.K
- National
Centre for Atmospheric Science, University of Leeds, Leeds LS2 9JT, U.K
| | - Robin Shannon
- School
of Chemistry, University of Leeds, Leeds LS2 9JT, U.K
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16
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Onel L, Thonger L, Blitz MA, Seakins PW, Bunkan AJC, Solimannejad M, Nielsen CJ. Gas-Phase Reactions of OH with Methyl Amines in the Presence or Absence of Molecular Oxygen. An Experimental and Theoretical Study. J Phys Chem A 2013; 117:10736-45. [DOI: 10.1021/jp406522z] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- L. Onel
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - L. Thonger
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - M. A. Blitz
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - P. W. Seakins
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - A. J. C. Bunkan
- CTCC,
Department of Chemistry, University of Oslo, P.O.Box 1033 Blindern, 0315 Oslo, Norway
| | - M. Solimannejad
- CTCC,
Department of Chemistry, University of Oslo, P.O.Box 1033 Blindern, 0315 Oslo, Norway
| | - C. J. Nielsen
- CTCC,
Department of Chemistry, University of Oslo, P.O.Box 1033 Blindern, 0315 Oslo, Norway
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18
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Chen Y, Li L, Cao Y, Wu J, Gao Q, Li Y, Hu H, Liu W, Liu Y, Kang Z, Li J. CuII-mediated controllable creation of tertiary and quaternary carbon centers: designed assembly and structures of a new class of copper complexes supported by in situ generated substituted 1-pyridineimidazo[1,5-a]pyridine ligands. CrystEngComm 2013. [DOI: 10.1039/c3ce00012e] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Katakura M, Hashimoto M, Tanabe Y, Shido O. Hydrogen-rich water inhibits glucose and α,β -dicarbonyl compound-induced reactive oxygen species production in the SHR.Cg-Leprcp/NDmcr rat kidney. Med Gas Res 2012; 2:18. [PMID: 22776773 PMCID: PMC3444324 DOI: 10.1186/2045-9912-2-18] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2012] [Accepted: 06/28/2012] [Indexed: 11/28/2022] Open
Abstract
Background Reactive oxygen species (ROS) production induced by α,β-dicarbonyl compounds and advanced glycation end products causes renal dysfunction in patients with type 2 diabetes and metabolic syndrome. Hydrogen-rich water (HRW) increases the H2 level in blood and tissues, thus reducing oxidative stress in animals as well as humans. In this study, we investigated the effects of HRW on glucose- and α,β-dicarbonyl compound-induced ROS generation in vitro and in vivo. Methods Kidney homogenates from Wistar rats were incubated in vitro with glucose and α,β-dicarbonyl compounds containing HRW, following which ROS levels were measured. In vivo animal models of metabolic syndrome, SHR.Cg-Leprcp/NDmcr rats, were treated with HRW for 16 weeks, following which renal ROS production and plasma and renal α,β-dicarbonyl compound levels were measured by liquid chromatograph mass spectrometer. Results HRW inhibited glucose- and α,β-dicarbonyl compound-induced ROS production in kidney homogenates from Wistar rats in vitro. Furthermore, SHR.Cg-Leprcp/NDmcr rats treated with HRW showed a 34% decrease in ROS production. Moreover, their renal glyoxal, methylglyoxal, and 3-deoxyglucosone levels decreased by 81%, 77%, and 60%, respectively. Positive correlations were found between renal ROS levels and renal glyoxal (r = 0.659, p = 0.008) and methylglyoxal (r = 0.782, p = 0.001) levels. Conclusion These results indicate that HRW inhibits the production of α,β-dicarbonyl compounds and ROS in the kidneys of SHR.Cg-Leprcp/NDmcr rats. Therefore, it has therapeutic potential for renal dysfunction in patient with type 2 diabetes and metabolic syndrome.
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Affiliation(s)
- Masanori Katakura
- Department of Environmental Physiology, Shimane University Faculty of Medicine, Izumo, Shimane, 693-8501, Japan
| | - Michio Hashimoto
- Department of Environmental Physiology, Shimane University Faculty of Medicine, Izumo, Shimane, 693-8501, Japan
| | - Yoko Tanabe
- Department of Environmental Physiology, Shimane University Faculty of Medicine, Izumo, Shimane, 693-8501, Japan
| | - Osamu Shido
- Department of Environmental Physiology, Shimane University Faculty of Medicine, Izumo, Shimane, 693-8501, Japan
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20
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da Silva G. Reaction of Methacrolein with the Hydroxyl Radical in Air: Incorporation of Secondary O2 Addition into the MACR + OH Master Equation. J Phys Chem A 2012; 116:5317-24. [DOI: 10.1021/jp303806w] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Gabriel da Silva
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Victoria 3010, Australia
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Orlando JJ, Tyndall GS. Laboratory studies of organic peroxy radical chemistry: an overview with emphasis on recent issues of atmospheric significance. Chem Soc Rev 2012; 41:6294-317. [PMID: 22847633 DOI: 10.1039/c2cs35166h] [Citation(s) in RCA: 252] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- John J Orlando
- National Center for Atmospheric Research, Earth System Laboratory, Atmospheric Chemistry Division, Boulder, USA.
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22
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Vereecken L, Francisco JS. Theoretical studies of atmospheric reaction mechanisms in the troposphere. Chem Soc Rev 2012; 41:6259-93. [DOI: 10.1039/c2cs35070j] [Citation(s) in RCA: 311] [Impact Index Per Article: 23.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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23
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Crounse JD, Paulot F, Kjaergaard HG, Wennberg PO. Peroxy radical isomerization in the oxidation of isoprene. Phys Chem Chem Phys 2011; 13:13607-13. [PMID: 21701740 DOI: 10.1039/c1cp21330j] [Citation(s) in RCA: 102] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report experimental evidence for the formation of C(5)-hydroperoxyaldehydes (HPALDs) from 1,6-H-shift isomerizations in peroxy radicals formed from the hydroxyl radical (OH) oxidation of 2-methyl-1,3-butadiene (isoprene). At 295 K, the isomerization rate of isoprene peroxy radicals (ISO2•) relative to the rate of reaction of ISO2• + HO2 is k(isom)(295)/(k(ISO2•+HO2)(295)) = (1.2 ± 0.6) x 10(8) mol cm(-3), or k(isom)(295) ≃ 0.002 s(-1). The temperature dependence of this rate was determined through experiments conducted at 295, 310 and 318 K and is well described by k(isom)(T)/(k(ISO2•+HO2)(T)) = 2.0 x 10(21) exp(-9000/T) mol cm(-3). The overall uncertainty in the isomerization rate (relative to k(ISO2•+HO2)) is estimated to be 50%. Peroxy radicals from the oxidation of the fully deuterated isoprene analog isomerize at a rate ∼15 times slower than non-deuterated isoprene. The fraction of isoprene peroxy radicals reacting by 1,6-H-shift isomerization is estimated to be 8-11% globally, with values up to 20% in tropical regions.
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Affiliation(s)
- John D Crounse
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
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Yang K, Qiang D, Delaney S, Mehta R, Bruce W, O’Brien PJ. Differences in glyoxal and methylglyoxal metabolism determine cellular susceptibility to protein carbonylation and cytotoxicity. Chem Biol Interact 2011; 191:322-9. [DOI: 10.1016/j.cbi.2011.02.012] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2010] [Revised: 02/11/2011] [Accepted: 02/12/2011] [Indexed: 11/26/2022]
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25
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Setokuchi O. Trajectory calculations of OH radical- and Cl atom-initiated reaction of glyoxal: atmospheric chemistry of the HC(O)CO radical. Phys Chem Chem Phys 2011; 13:6296-304. [DOI: 10.1039/c0cp01942a] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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26
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da Silva G. Kinetics and Mechanism of the Glyoxal + HO2 Reaction: Conversion of HO2 to OH by Carbonyls. J Phys Chem A 2010; 115:291-7. [DOI: 10.1021/jp108358y] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Gabriel da Silva
- Department of Chemical and Biomolecular Engineering, The University of Melbourne, Parkville 3010, Victoria, Australia
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27
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Asatryan R, da Silva G, Bozzelli JW. Quantum Chemical Study of the Acrolein (CH2CHCHO) + OH + O2 Reactions. J Phys Chem A 2010; 114:8302-11. [DOI: 10.1021/jp104828a] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Rubik Asatryan
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, USA, and Department of Chemical and Biomolecular Engineering, The University of Melbourne, Victoria 3010, Australia
| | - Gabriel da Silva
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, USA, and Department of Chemical and Biomolecular Engineering, The University of Melbourne, Victoria 3010, Australia
| | - Joseph W. Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, USA, and Department of Chemical and Biomolecular Engineering, The University of Melbourne, Victoria 3010, Australia
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