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Elliott CI, Simmons DBD, Stotesbury T. Integrating time since deposition estimation of bloodstains into a DNA profiling workflow: A novel approach using fluorescence spectroscopy. Talanta 2025; 284:127234. [PMID: 39603014 DOI: 10.1016/j.talanta.2024.127234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Revised: 11/13/2024] [Accepted: 11/15/2024] [Indexed: 11/29/2024]
Abstract
Determining the time since deposition (TSD) of bloodstains is important to establish a timeline of bloodshed, while DNA profiling addresses identity (source attribution). Traditionally treated as separate processes, this study integrates TSD estimation into routine DNA profiling by analyzing typically discarded cell lysate (eluates) from spin-column-based DNA extractions. Fluorescence spectroscopy was used to analyze eluates from bloodstains deposited up to 99 weeks. Two excitation-emission matrices (EEMs) were acquired for each sample and deconvoluted using parallel factor analysis (PARAFAC) to identify individual fluorophores. For example, tryptophan demonstrated a time-dependent decrease in fluorescence. Additionally, we observed an accumulation of fluorescent oxidation products (FOX) and advanced glycation end products (AGEs) over TSD. An untargeted metabolomics high-performance liquid chromatography-mass spectrometry workflow was applied to assist with fluorophore identification. Chemometric models were used to estimate TSD from EEM fluorescence data. Boruta feature selection coupled with random forest regression outperformed all other models and achieved high accuracy, with an R2 of 0.993 and root mean square error of prediction (RMSEP) of 2.83 weeks for the full 99-week period, and an R2 of 0.987 and RMSEP of 2.06 weeks for the 1-year timeframe. Comparisons were also made between anticoagulant-free (AC-free) and anticoagulant-treated (AC-treated) bloodstains deposited up to 3 months. We noted differences in fluorescence based on AC treatment, with AC-free blood exhibiting higher FOX and lower AGE fluorescence than AC-treated blood. Our findings demonstrate the effectiveness and feasibility of integrating TSD estimation into routine forensic DNA extractions while maintaining high prediction accuracies.
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Affiliation(s)
- Colin I Elliott
- Applied Bioscience Graduate Program, Faculty of Science, Ontario Tech University, 2000 Simcoe St N, Oshawa, Ontario, L1G 0C5, Canada.
| | - Denina B D Simmons
- Faculty of Science Ontario Tech University, 2000 Simcoe St N, Oshawa, Ontario, L1G 0C5, Canada
| | - Theresa Stotesbury
- Faculty of Science Ontario Tech University, 2000 Simcoe St N, Oshawa, Ontario, L1G 0C5, Canada.
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2
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Abstract
Endogenous photosensitizers play a critical role in both beneficial and harmful light-induced transformations in biological systems. Understanding their mode of action is essential for advancing fields such as photomedicine, photoredox catalysis, environmental science, and the development of sun care products. This review offers a comprehensive analysis of endogenous photosensitizers in human skin, investigating the connections between their electronic excitation and the subsequent activation or damage of organic biomolecules. We gather the physicochemical and photochemical properties of key endogenous photosensitizers and examine the relationships between their chemical reactivity, location within the skin, and the primary biochemical events following solar radiation exposure, along with their influence on skin physiology and pathology. An important take-home message of this review is that photosensitization allows visible light and UV-A radiation to have large effects on skin. The analysis presented here unveils potential causes for the continuous increase in global skin cancer cases and emphasizes the limitations of current sun protection approaches.
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Affiliation(s)
- Erick L Bastos
- Department of Fundamental Chemistry, Institute of Chemistry, University of São Paulo, 05508-000 São Paulo, São Paulo, Brazil
| | - Frank H Quina
- Department of Fundamental Chemistry, Institute of Chemistry, University of São Paulo, 05508-000 São Paulo, São Paulo, Brazil
- Department of Chemical Engineering, Polytechnic School, University of São Paulo, 05508-000 São Paulo, São Paulo, Brazil
| | - Maurício S Baptista
- Department of Biochemistry, Institute of Chemistry, University of São Paulo, 05508-000 São Paulo, São Paulo, Brazil
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Abstract
SignificanceZinc deficiency in the human population, a major public health concern, can also be a consequence of nutritional deficiency in protein uptake. The discovery that tryptophan metabolites 3-hydroxykynurenine and xanthurenic acid are major zinc-binding ligands in insect cells establishes the kynurenine pathway as a regulator of systemic zinc homeostasis. Many biological processes influenced by zinc and the kynurenine pathway, including the regulation of innate and acquired immune responses to viral infections, have not been studied in light of the direct molecular links revealed in this study.
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Chen S, Li K, Liu H, Zhang J, Peng T. Efficient CO2 reduction over a Ru-pincer complex/TiO2 hybrid photocatalyst via direct Z-scheme mechanism. Catal Sci Technol 2022. [DOI: 10.1039/d1cy01840j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Solar-driven CO2 conversion to hydrocarbon fuels is a feasible way to solve the increasingly serious energy problem and greenhouse effect. Herein, we fabricate a novel hybrid photocatalyst for CO2 reduction...
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Zhuravleva YS, Tsentalovich YP. Acid-alkaline properties of triplet state and radical of kynurenic acid. J Photochem Photobiol A Chem 2018. [DOI: 10.1016/j.jphotochem.2018.07.029] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Xiang W, Li L, Dai Z, Meng X, Li R, Zhang J, Peng T. TiO 2 modified with a Ru( ii)–N′NN′ 8-hydroxyquinolyl complex for efficient gaseous photoreduction of CO 2. Catal Sci Technol 2018. [DOI: 10.1039/c8cy00158h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A rare example of a Ru(ii) pincer complex for the efficient photoreduction of CO2 to CO/CH4 in a gaseous system was developed.
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Affiliation(s)
- Wenjing Xiang
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
| | - Lin Li
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
| | - Zengjin Dai
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
| | - Xianggao Meng
- Key Laboratory of Pesticide and Chemical Biology
- Ministry of Education
- School of Chemistry
- Central China Normal University
- Wuhan 430079
| | - Renjie Li
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
| | - Jing Zhang
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
| | - Tianyou Peng
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- P. R. China
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Sormacheva ED, Sherin PS, Tsentalovich YP. Dimerization and oxidation of tryptophan in UV-A photolysis sensitized by kynurenic acid. Free Radic Biol Med 2017; 113:372-384. [PMID: 29024806 DOI: 10.1016/j.freeradbiomed.2017.10.007] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/18/2017] [Revised: 10/04/2017] [Accepted: 10/05/2017] [Indexed: 11/24/2022]
Abstract
Photoinduced generation of radicals in the eye lens may play an important role in the modification of proteins leading to their coloration, aggregation, and insolubilization. The radicals can be formed via the reactions of photoexcited endogenous chromophores of the human lens with lens proteins, in particular with tryptophan residues. In the present work we studied the reactions induced by UV-A (315-400nm) light between kynurenic acid (KNA), an effective photosensitizer present in the human lens, and N-acetyl-L-tryptophan (NTrpH) under aerobic and anaerobic conditions. Our results show that the reaction mechanism strongly depends on the presence of oxygen in solution. Under aerobic conditions, the generation of singlet oxygen is the major channel of the effective NTrpH oxidation. In argon-bubbled solutions, the quenching of triplet KNA by NTrpH results in the formation of KNA•- and NTrp• radicals. Under laser pulse irradiation, when the radical concentration is high, the main pathway of the radical decay is the back electron transfer with the restoration of initial reagents. Other reactions include (i) the radical combination yielding NTrp dimers and (ii) the oxygen atom transfer from KNA•- to NTrp• with the formation of oxidized NTrp species and deoxygenated KNA products. In continuous-wave photolysis, even trace amounts of molecular oxygen are sufficient to oxidize the majority of KNA•- radicals with the rate constant of (2.0 ± 0.2) × 109M-1s-1, leading to the restoration of KNA and the formation of superoxide radical O2•-. The latter reacts with NTrp• via either the radical combination to form oxidized NTrp (minor pathway), or the electron transfer to restore NTrpH in the ground state (major pathway). As the result, the quantum yields of the starting compound decomposition under continuous-wave anaerobic photolysis are rather low: 1.6% for NTrpH and 0.02% for KNA. The photolysis of KNA with alpha-crystallin yields the same deoxygenated KNA products as the photolysis of KNA with NTrpH, indicating the similarity of the photolysis mechanisms. Thus, inside the eye lens KNA can sensitize both protein photooxidation and protein covalent cross-linking with the minor self-degradation. This may play an important role in the lens protein modifications during the normal aging and cataract development.
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Affiliation(s)
- Ekaterina D Sormacheva
- International Tomography Center SB RAS, Institutskaya str. 3A, 630090 Novosibisrk, Russia
| | - Peter S Sherin
- International Tomography Center SB RAS, Institutskaya str. 3A, 630090 Novosibisrk, Russia; Novosibirsk State University, Pirogova str. 2, 630090 Novosibisrk, Russia.
| | - Yuri P Tsentalovich
- International Tomography Center SB RAS, Institutskaya str. 3A, 630090 Novosibisrk, Russia; Novosibirsk State University, Pirogova str. 2, 630090 Novosibisrk, Russia
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8
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Influence of medium viscosity on photophysical properties of kynurenic acid and kynurenine yellow. Russ Chem Bull 2017. [DOI: 10.1007/s11172-017-1727-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Zelentsova EA, Yanshole LV, Fursova AZ, Tsentalovich YP. Optical properties of the human lens constituents. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2017. [PMID: 28624737 DOI: 10.1016/j.jphotobiol.2017.06.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
The absorption and fluorescence properties of the metabolomic (MET), water-soluble and urea-soluble protein fractions from the middle-age, aged, and cataractous human lenses have been measured. At 280nm and 300nm the major lens absorbers are crystallins, which absorb more than 90% of light in the UV-B region (280-315nm). In middle-aged lenses, the absorption at 360nm is mostly provided by UV filters contained in the MET fraction. With aging, and especially with the cataract development, the absorption of MET fraction in UV-A region (315-400nm) decreases due to the drop of the UV filter concentration, while the absorption of protein fractions increases due to the accumulation of post-translational modifications. Consequently, the contribution of the MET fraction into the total lens absorption at 360nm decays from 63% in middle-aged lenses to 25% in aged lenses to 3% in cataractous lenses. The fluorescence yield of the MET fraction from cataractous lenses also significantly increases. Therefore, the protection of the lens tissue against UV radiation in aged and cataractous lenses weakens: the absorption of UV-A light is mostly provided by modified crystallins and non-UV-filter metabolites, which are photochemically more active than the UV filters. The obtained data indicate that the aged and cataractous human lenses are more vulnerable to UV-A light than the middle-aged lenses.
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Affiliation(s)
- Ekaterina A Zelentsova
- International Tomography Center SB RAS, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia
| | - Lyudmila V Yanshole
- International Tomography Center SB RAS, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia
| | - Anjella Zh Fursova
- Novosibirsk State Regional Clinical Hospital, Nemirovicha-Danchenko 130, Novosibirsk 630087, Russia
| | - Yuri P Tsentalovich
- International Tomography Center SB RAS, Institutskaya 3a, Novosibirsk 630090, Russia; Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russia.
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10
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Synthesis and structures of nickel(II) complexes with xanthurenate ions. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2015.12.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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11
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Samanta A, Guchhait N, Bhattacharya SC. Photophysical aspects of biological photosensitizer Kynurenic acid from the perspective of experimental and quantum chemical study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 129:457-465. [PMID: 24751782 DOI: 10.1016/j.saa.2014.03.079] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2014] [Revised: 03/11/2014] [Accepted: 03/21/2014] [Indexed: 06/03/2023]
Abstract
In the present contribution, we have explored ground and excited state spectroscopic properties of an antiexcitotoxic and anticonvulsant drug, Kynurenic acid (KA), through steady-state absorption, emission and time-resolved emission spectroscopy and quantum chemical calculations. The main focus of this article is to illustrate the effects of various parameters such as the nature of the solvents and pH of the medium on the spectral properties of KA which confirms the presence of different neutral and ionic species in the ground and excited states. The molecule KA exists mainly as keto- or anionic form in the ground state, whereas the main contribution of its emission is arising from the keto tautomer in the excited state. Quantum chemical calculations by Density Functional Theory (DFT) method has been effectively employed to correlate the experimental findings. The ground and excited state properties of KA ascertained by means of experimental and theoretical method reveal that it resembles well with other two compounds, 4-hydroxyquinoline and xanthurenic acid formed by the decomposition of UV filters.
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Affiliation(s)
- Anuva Samanta
- Department of Chemistry, Jadavpur University Raja S.C. Mallick Road, Kolkata 700 032, India
| | - Nikhil Guchhait
- Department of Chemistry, University of Calcutta 92, A.P.C. Road, Kolkata 700 009, India.
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Zelentsova EA, Sherin PS, Snytnikova OA, Kaptein R, Vauthey E, Tsentalovich YP. Photochemistry of aqueous solutions of kynurenic acid and kynurenine yellow. Photochem Photobiol Sci 2013; 12:546-58. [DOI: 10.1039/c2pp25357g] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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13
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Dupont N, Ran YF, Liu SX, Grilj J, Vauthey E, Decurtins S, Hauser A. A Donor–Acceptor Tetrathiafulvalene Ligand Complexed to Iron(II): Synthesis, Electrochemistry, and Spectroscopy of [Fe(phen)2(TTF-dppz)](PF6)2. Inorg Chem 2012; 52:306-12. [DOI: 10.1021/ic3019277] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Nathalie Dupont
- Département de Chimie Physique, Université de Genève, 30 Quai Ernest-Ansermet,
CH-1211 Genève 4, Switzerland
| | - Ying-Fen Ran
- Departement für Chemie und Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Shi-Xia Liu
- Departement für Chemie und Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Jakob Grilj
- Département de Chimie Physique, Université de Genève, 30 Quai Ernest-Ansermet,
CH-1211 Genève 4, Switzerland
| | - Eric Vauthey
- Département de Chimie Physique, Université de Genève, 30 Quai Ernest-Ansermet,
CH-1211 Genève 4, Switzerland
| | - Silvio Decurtins
- Departement für Chemie und Biochemie, Universität Bern, Freiestrasse 3, CH-3012 Bern, Switzerland
| | - Andreas Hauser
- Département de Chimie Physique, Université de Genève, 30 Quai Ernest-Ansermet,
CH-1211 Genève 4, Switzerland
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Grilj J, Todorova TK, Yi C, Liu SX, Vauthey E, Decurtins S. A Spectroscopic and Computational Study of a Photoinduced Cross-Dehydrogenative Coupling Reaction of a Stable Semiquinone Radical. Chemistry 2012; 18:13605-8. [DOI: 10.1002/chem.201201463] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2012] [Revised: 07/25/2012] [Indexed: 11/11/2022]
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