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Yamamoto Y, Taniguchi H, Nguyen NM, Yokoyama F, Choowongkomon K, Angelini A, Horiuchi JI, Kumada Y. Development of a novel and broadly applicable sandwich ELISA assay based on rabbit single-chain variable fragments and a modified Ig-binding domain of protein L fused to a polystyrene-binding peptide. J Immunol Methods 2024; 534:113771. [PMID: 39490960 DOI: 10.1016/j.jim.2024.113771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 10/04/2024] [Accepted: 10/24/2024] [Indexed: 11/05/2024]
Abstract
Most of currently available sandwich-type enzyme-linked immunosorbent assays (ELISA) require the use of full-length animal-derived antibodies which poses welfare criticisms and are often expensive to produce. There is therefore a strong demand for the development of more affordable and animal-free methods to produce antibodies for sandwich ELISA assay. To address these issues, we propose here the development of a new technology based on two complementary rabbit single-chain variable fragments (scFvs) and an Ig-binding domain of protein L (PpL1) fused to a polystyrene-binding peptide (PS-tag) that can be recombinantly produced in bacteria. Toward this goal, we developed a rabbit scFv capable to bind the antigen via its variable regions while engaging protein L through its constant framework domain. To enhance the density of captured scFv and enable a better solvent exposure, we generated multiple PpL1 variants bearing polystyrene-binding peptides (PS) tags fused to its ends. The tandem trimer of PpL1 variant bearing PS-tags located at the N-terminus (PpL1'-T-PSN) revealed increased antigen-binding signal when immobilized on hydrophilic polystyrene (phi-PS) plates. By CDR-grafting different antigen-binding specificities into our engineered protein L-binding scFv we validated our technology against a different antigen. Finally, to further enhance the sensitivity of our assay, we implemented a protein L-based pretreatment to remove potential inhibitory immunoglobulin often present in the blood samples. The ability to rapidly and cost-effectively generate animal-free recombinant antibody fragments that can be adsorbed and specifically oriented on plates while retaining their antigen-binding properties could lead to the development of innovative and widely applicable sandwich ELISA systems for the efficient, versatile and sensitive detection of different types of antigens.
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Affiliation(s)
- Yodai Yamamoto
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan
| | - Haruka Taniguchi
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan
| | - Ngoc Minh Nguyen
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan
| | - Fuki Yokoyama
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan
| | | | - Alessandro Angelini
- Department of Molecular Sciences and Nanosystems, Ca' Foscari University of Venice, Via Torino 155, 30172 Venice, Italy; European Centre for Living Technology (ECLT), Ca' Bottacin, Dorsoduro 3911, Calle Crosera, 30123 Venice, Italy
| | - Jun-Ichi Horiuchi
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan
| | - Yoichi Kumada
- Faculty of Molecular Chemistry and Engineering, Kyoto Institute of Technology, Kyoto, Japan.
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2
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Ngoubeyou PSK, Wolkersdorfer C, Ndibewu PP, Augustyn W. Toxicity of polychlorinated biphenyls in aquatic environments - A review. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2022; 251:106284. [PMID: 36087490 DOI: 10.1016/j.aquatox.2022.106284] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 08/25/2022] [Accepted: 08/27/2022] [Indexed: 06/15/2023]
Abstract
The assessment of polychlorinated biphenyls (PCBs) and their congeners resulting from the pollution of all environmental media is inherently related to its persistence and ubiquitous nature. In principle, determination of this class of contaminants are limited to the determination of their concentrations in the various environmental matrices. For solving many problems in this context, knowledge of the emission sources of PCBs, transport pathways, and sites of contamination and biomagnification is of great benefit to scientists and researchers, as well as many regulatory organizations. By far the largest amounts of PCBs, regardless of their discharged points, end up in the soil, sediment and finally in different aquatic environments. By reviewing relevant published materials, the source of origin of PCBs in the environment particularly from different pollution point sources, it is possible to obtain useful information on the nature of different materials that are sources of PCBs, or their concentrations and their toxicity or health effects and how they can be removed from contaminated media. This review focuses on the sources of PCBs in aquatic environments and critically reviews the toxicity of PCBs in aquatic animals and plants. The review also assesses the toxicity equivalency factors (TEFs) of PCBs providing valuable knowledge to other scientists and researchers that enables regulatory laws to be formulated based on selective determination of concentrations regarding their maximum permissible limits (MPLs) allowed. This review also supplies a pool of valuable information useful for designing decontamination technologies for PCBs in media like soil, sediment, and wastewaters.
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Affiliation(s)
| | - Christian Wolkersdorfer
- Tshwane University of Technology, SARChI Chair for Mine Water Treatment, Department of Environmental, Water and Earth Sciences, Private Bag X680, Pretoria, 0001, South Africa
| | - Peter Papoh Ndibewu
- Tshwane University of Technology, Department of Chemistry, Pretoria 0001, South Africa.
| | - Wilma Augustyn
- Tshwane University of Technology, Department of Chemistry, Pretoria 0001, South Africa
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3
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Musa AM, Kiely J, Luxton R, Honeychurch KC. Recent progress in screen-printed electrochemical sensors and biosensors for the detection of estrogens. Trends Analyt Chem 2021. [DOI: 10.1016/j.trac.2021.116254] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Jia Y, Li H, Qu Y, Chen W, Song L. Phytotoxicity, bioaccumulation and potential risks of plant irrigations using cyanobloom-loading freshwater. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 624:704-712. [PMID: 29272839 DOI: 10.1016/j.scitotenv.2017.12.164] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2017] [Revised: 12/12/2017] [Accepted: 12/15/2017] [Indexed: 06/07/2023]
Abstract
The toxicity of cyanotoxins on plant has been reported. However, in eutrophic waters harmful cyanobacteria are associated with other environmental pollutants, such as persistent organic pollutants (POPs) and metals. Information on the phytotoxicity and bioaccumulation of coexisted cyanotoxins and these environmental pollutants is still lacking. In this study, the combined phytotoxicities of three types of cyanobacteria-associated pollutants, i.e., microcystin-LR (MC-LR), cadmium (Cd), 2, 4, 4'-Trichlorobiphenyl (PCB-28) were systematically investigated. After 7-days exposure, strong synergistic effects can be detected when Arabidopsis thaliana seeds and seedlings exposed to binary mixtures of MC-LR+PCB-28 and PCB-28+Cd. The strongest inhibition occurred when A. thaliana exposed to their ternary mixture under both glasshouse and semi-field conditions. Moreover, bioaccumulation of MC-LR, Cd and PCB-28 was enhanced when seedlings exposed to their binary/ternary mixtures, especially when seedlings were treated with higher concentrations of toxicants (MC-LR, 1mgL-1; Cd, 10mgL-1; PCB-28, 1μgL-1). Additionally, pronounced toxic effects could be determined under 7-days after seedlings were irrigated with raw cyanobloom-containing water (collected from Lake Taihu in China)and its dilutions. Seeds production decreased significantly after the continuous irrigation with cyanoblooms-containing water. Collectively, this work will be an informative implication for risks of cyanoblooms and adequate utilization of freshwater containing cyanoblooms for crop irrigation.
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Affiliation(s)
- Yunlu Jia
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; Institute of Environmental Research, Department of Ecosystem Analysis, RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany
| | - Huiling Li
- College of Pharmacy, Wuhan University, Wuhan 430071, China
| | - Yueming Qu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China
| | - Wei Chen
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.
| | - Lirong Song
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.
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Sun Y, Ban B, Bradbury A, Ansari GAS, Blake DA. Combining Yeast Display and Competitive FACS to Select Rare Hapten-Specific Clones from Recombinant Antibody Libraries. Anal Chem 2016; 88:9181-9. [PMID: 27571429 PMCID: PMC5032104 DOI: 10.1021/acs.analchem.6b02334] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
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The development of antibodies to
low molecular weight haptens remains
challenging due to both the low immunogenicity of many haptens and
the cross-reactivity of the protein carriers used to generate the
immune response. Recombinant antibodies and novel display technologies
have greatly advanced antibody development; however, new techniques
are still required to select rare hapten-specific antibodies from
large recombinant libraries. In the present study, we used a combination
of phage and yeast display to screen an immune antibody library (size,
4.4 × 106) against hapten markers for petroleum contamination
(phenanthrene and methylphenanthrenes). Selection via phage display
was used first to enrich the library between 20- and 100-fold for
clones that bound to phenanthrene–protein conjugates. The enriched
libraries were subsequently transferred to a yeast display system
and a newly developed competitive FACS procedure was employed to select
rare hapten-specific clones. Competitive FACS increased the frequency
of hapten-specific scFvs in our yeast-displayed scFvs from 0.025 to
0.005% in the original library to between 13 and 35% in selected pools.
The presence of hapten-specific scFvs was confirmed by competitive
ELISA using periplasmic protein. Three distinct antibody clones that
recognize phenanthrene and methylphenanthrenes were selected, and
their distinctive binding properties were characterized. To our knowledge,
these are first antibodies that can distinguish between methylated
(petrogenic) versus unmethylated (pyrogenic) phenanthrenes; such antibodies
will be useful in detecting the sources of environmental contamination.
This selection method could be generally adopted in the selection
of other hapten-specific recombinant antibodies.
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Affiliation(s)
- Yue Sun
- Department of Biochemistry and Molecular Biology, Tulane University School of Medicine , New Orleans, Louisiana, United States
| | - Bhupal Ban
- Department of Biochemistry and Molecular Biology, Tulane University School of Medicine , New Orleans, Louisiana, United States
| | - Andrew Bradbury
- Bioscience Division, Los Alamos National Laboratory , Los Alamos, New Mexico, United States
| | - G A Shakeel Ansari
- Department of Pathology, University of Texas Medical Branch , Galveston, Texas, United States
| | - Diane A Blake
- Department of Biochemistry and Molecular Biology, Tulane University School of Medicine , New Orleans, Louisiana, United States
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Sun Y, Zhang Q, Wang H, Wang W. Quantum chemical investigation on the mechanism and kinetics of OH radical-initiated atmospheric oxidation of PCB-47. CHEMOSPHERE 2015; 133:53-60. [PMID: 25898309 DOI: 10.1016/j.chemosphere.2015.03.040] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2014] [Revised: 03/08/2015] [Accepted: 03/19/2015] [Indexed: 06/04/2023]
Abstract
The OH radical-initiated atmospheric oxidation degradation of 2,2',4,4'-tetrachlorobiphenyl (PCB-47) was investigated by using quantum chemical calculations. All possible pathways involved in the oxidation process were discussed. Potential barriers and reaction heats have been obtained to assess the energetically favorable reaction pathways and the relatively stable products. The study shows that the OH radicals are more likely to attack the C3 and C5 atom of the aromatic ring in the PCB-47 molecule to form PCB-OH adducts. Subsequent reactions are the addition of O2 or NO2 molecule to the PCB-OH adducts at the ortho position of the OH group. Water molecule plays an important role during the whole degradation process. The individual and overall rate constants were calculated by using the Rice-Ramsperger-Kassel-Marcus (RRKM) theory over the temperature range of 180-370K. At 298K, the atmospheric lifetime of PCB-47 determined by OH radicals is about 9.1d. The computational results are crucial to risk assessment and pollution prevention of PCBs.
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Affiliation(s)
- Yanhui Sun
- Environment Research Institute, Shandong University, Jinan 250100, PR China
| | - Qingzhu Zhang
- Environment Research Institute, Shandong University, Jinan 250100, PR China.
| | - Hui Wang
- School of Environment, Tsinghua University, Beijing 100084, PR China.
| | - Wenxing Wang
- Environment Research Institute, Shandong University, Jinan 250100, PR China
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Petriello MC, Newsome BJ, Dziubla TD, Hilt JZ, Bhattacharyya D, Hennig B. Modulation of persistent organic pollutant toxicity through nutritional intervention: emerging opportunities in biomedicine and environmental remediation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014; 491-492:11-6. [PMID: 24530186 PMCID: PMC4077968 DOI: 10.1016/j.scitotenv.2014.01.109] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2013] [Revised: 01/27/2014] [Accepted: 01/28/2014] [Indexed: 04/15/2023]
Abstract
Environmental pollution is increasing worldwide, and there is evidence that exposure to halogenated persistent organic pollutants (POPs) such as polychlorinated biphenyls can contribute to the pathology of inflammatory diseases such as atherosclerosis, diabetes, and cancer. Pollutant removal from contaminated sites and subsequent pollutant degradation are critical for reducing the long-term health risks associated with exposure. However, complete remediation of a toxicant from the environment is very difficult and cost-prohibitive. Furthermore, remediation technologies often result in the generation of secondary toxicants. Considering these circumstances, environmentally-friendly and sustainable remediation technologies and biomedical solutions to reduce vulnerability to environmental chemical insults need to be explored to reduce the overall health risks associated with exposure to environmental pollutants. We propose that positive lifestyle changes such as healthful nutrition and consumption of diets rich in fruits and vegetables or bioactive nutrients with antioxidant and/or anti-inflammatory properties will reduce the body's vulnerability to environmental stressors and thus reduce toxicant-mediated disease pathologies. Interestingly, emerging evidence now implicates the incorporation of bioactive nutrients, such as plant-derived polyphenols, in technologies focused on the capture, sensing and remediation of halogenated POPs. We propose that human nutritional intervention in concert with the use of natural polyphenol sensing and remediation platforms may provide a sensible means to develop primary and long-term prevention strategies of diseases associated with many environmental toxic insults including halogenated POPs.
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Affiliation(s)
- Michael C Petriello
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Graduate Center for Toxicology, College of Medicine, University of Kentucky, Lexington, KY 40536, USA
| | - Bradley J Newsome
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Department of Chemistry, College of Arts and Sciences, University of Kentucky, Lexington, KY 40506, USA
| | - Thomas D Dziubla
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Department of Chemical and Materials Engineering, College of Engineering, University of Kentucky, Lexington, KY 40506, USA
| | - J Zach Hilt
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Department of Chemical and Materials Engineering, College of Engineering, University of Kentucky, Lexington, KY 40506, USA
| | - Dibakar Bhattacharyya
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Department of Chemical and Materials Engineering, College of Engineering, University of Kentucky, Lexington, KY 40506, USA
| | - Bernhard Hennig
- Superfund Research Center, University of Kentucky, Lexington, KY 40536, USA; Graduate Center for Toxicology, College of Medicine, University of Kentucky, Lexington, KY 40536, USA; Department of Animal and Food Sciences, College of Agriculture Food and Environment, University of Kentucky, Lexington, KY 40546, USA
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8
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Zhang M, Jackson GP, Kruse NA, Bowman JR, Harrington PDB. Determination of Aroclor 1260 in soil samples by gas chromatography with mass spectrometry and solid-phase microextraction. J Sep Sci 2014; 37:2751-6. [DOI: 10.1002/jssc.201400102] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2014] [Revised: 06/16/2014] [Accepted: 07/16/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Mengliang Zhang
- Clippinger Laboratories; Department of Chemistry and Biochemistry, Center for Intelligent Chemical Instrumentation, Ohio University; Athens OH USA
| | - Glen P. Jackson
- Forensic and Investigative Science Program; C. Eugene Bennett Department of Chemistry, West Virginia University; Morgantown WV USA
| | - Natalie A. Kruse
- Voinovich School of Leadership and Public Affairs; Ohio University; Athens OH USA
| | - Jennifer R. Bowman
- Voinovich School of Leadership and Public Affairs; Ohio University; Athens OH USA
| | - Peter de B. Harrington
- Clippinger Laboratories; Department of Chemistry and Biochemistry, Center for Intelligent Chemical Instrumentation, Ohio University; Athens OH USA
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Yang GX, Zhuang HS, Chen HY, Ping XY, Bu D. A sensitive immunosorbent bio-barcode assay based on real-time immuno-PCR for detecting 3,4,3',4'-tetrachlorobiphenyl. Anal Bioanal Chem 2014; 406:1693-700. [DOI: 10.1007/s00216-013-7583-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2013] [Revised: 11/21/2013] [Accepted: 12/14/2013] [Indexed: 11/25/2022]
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10
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Zhang M, Harrington PDB. Automated pipeline for classifying Aroclors in soil by gas chromatography/mass spectrometry using modulo compressed two-way data objects. Talanta 2013; 117:483-91. [DOI: 10.1016/j.talanta.2013.09.050] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2013] [Revised: 09/26/2013] [Accepted: 09/27/2013] [Indexed: 10/26/2022]
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11
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Chen HY, Zhuang HS, Yang GX, Ji XL. Development of a new polyclonal antibody for the determination of polychlorinated biphenyls in indoor air by ic-ELISA. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2013; 20:2244-2251. [PMID: 22843339 DOI: 10.1007/s11356-012-1090-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2012] [Accepted: 07/10/2012] [Indexed: 06/01/2023]
Abstract
A new polyclonal antibody (pAb) was prepared and used for the determination of polychlorinated biphenyls (PCBs) in air samples to promote the application of immunoassay technology in the determination of PCBs. Three PCB congeners immunogen mixture was used to stimulate immune responses in rabbits. The specific pAb to PCBs was obtained and used to develop an indirect competitive enzyme-linked immunosorbent assay (ic-ELISA). A standard curve for Aroclor 1248 was prepared using concentrations ranging from 0.1 to 100 μg L(-1). The average IC50 value was 16.21 μg L(-1) and the limit of detection at 10% inhibition (IC90) was 0.069 μg L(-1). The entire procedure was then evaluated using spiked air samples. The recoveries of Aroclor 1248 at various spiking levels in the air samples ranged from 84 to 113%, with relative standard deviations of 3 to 6%. Under optimum conditions, the cross-reactivity profiles of the assays were obtained using three selected congeners, four Aroclor products, and other structurally related compounds of PCBs. The assays were found to be highly specific for PCB congeners and Aroclors 1248 and 1242. The air samples were then analyzed using gas chromatography coupled with high-resolution mass spectrometry to confirm the ic-ELISA results. The attained results demonstrated that the proposed method was an effective and inexpensive technique for the PCBs determination in air samples.
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Affiliation(s)
- Han-Yu Chen
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, People's Republic of China
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Chen HY, Zhuang HS, Yang GX. Detection of PCB77 by Indirect Competitive Enzyme-linked Immunosorbent Assay in Sea Sediment Samples. B KOREAN CHEM SOC 2013. [DOI: 10.5012/bkcs.2013.34.3.922] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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A SERS-based immunoassay with highly increased sensitivity using gold/silver core-shell nanorods. Biosens Bioelectron 2012; 38:94-9. [DOI: 10.1016/j.bios.2012.05.005] [Citation(s) in RCA: 112] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2012] [Revised: 05/04/2012] [Accepted: 05/07/2012] [Indexed: 11/20/2022]
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