Recent Advancements and Future Prospects in NBD-Based Fluorescent Chemosensors: Design Strategy, Sensing Mechanism, and Biological Applications

In recent years, the field of Supramolecular Chemistry has witnessed tremendous progress owing to the development of versatile optical sensors for the detection of harmful biological analytes. Nitrobenzoxadiazole (NBD) is one such scaffold that has been exploited as fluorescent probes for selective recognition of harmful analytes and their optical imaging in various cell lines including HeLa, PC3, A549, SMMC-7721, MDA-MB-231, HepG2, MFC-7, etc. The NBD-derived molecular probes are majorly synthesized from the chloro derivative of NBD via nucleophilic aromatic substitution. This general NBD moiety ligation method to nucleophiles has been leveraged to develop various derivatives for sensing analytes. NBD-derived probes are extensively used as optical sensors because of remarkable properties like excellent stability, large Stoke's shift, high efficiency and stability, visible excitation, easy use, low cost, and high quantum yield. This article reviewed NBD-based probes for the years 2017-2023 according to the sensing of analyte(s), including cations, anions, thiols, and small molecules like hydrogen sulfide. The sensing mechanism, designing of the probe, plausible binding mechanism, and biological application of chemosensors are summarized. The real-time application of optical sensors has been discussed by various methods, such as paper strips, molecular logic gates, smartphone detection, development of test kits, etc. This article will update the researchers with the in vivo and in vitro biological applicability of NBD-based molecular probes and challenges the research fraternity to design, propose, and develop better chemosensors in the future possessing commercial utility.

Recent advances in metal directed C-H amidation/amination using sulfonyl azides and phosphoryl azides

Transition metal-catalyzed C-N bond formation reactions have gained popularity as a method for selectively transforming common C-H bonds into N-functionalized molecules. This approach is particularly useful for synthesizing aminated molecules, which require aminating reagents and amidated building blocks. Over the past two decades, significant advancements have been achieved in transition-metal-catalyzed C-H functionalization, with organic azides emerging as promising amino sources and internal oxidants. This review focuses on recent developments in utilizing sulfonyl and phosphoryl azides as building blocks for directed intra- and intermolecular C-H functionalization reactions. Specifically, it discusses methods for synthesizing sulfonamidates and phosphoramidates using sulfonyl and phosphoryl azides, respectively. The article highlights the potential of C-H functionalization reactions with organic azides for efficiently and sustainably synthesizing N-functionalized molecules, providing valuable insights into the latest advancements in this field.

A Fast Dual-responsive OFF-ON Fluorescent Probe for Cysteine and Glutathione without Interference from Homocysteine

Abnormal levels of biothiols, such as cysteine (Cys), homocystine (Hcy), and glutathione (GSH), are generally known to result in various diseases. A fast dual-responsive OFF-ON fluorescent probe HBO-AC was synthesized and developed. Non-fluorescent HBO-AC can sense Cys by regaining fluorescence at 444 nm within 10 min and a response to GSH by restoring fluorescence at 349 nm within 20 min. There is no mutual interference with Δλ ca. 100 nm. A novel method was developed by utilizing a low reaction rate between HBO-AC and Hcy to eliminate common interference from Hcy. A successful determination of Cys and GSH in fetal bovine serum (FBS) indicated that the probe had potential application for clinical diagnosis. Moreover, it was confirmed that HBO-AC can resist interference from protein to some extent, since FBS was not pretreated before use.

A unique benzimidazole-naphthalene hybrid molecule for independent detection of Zn2+ and N3- ions: Experimental and theoretical investigations

Single crystal X-ray structurally characterized benzimidazole-naphthalene hybrid (NABI) functions as a unique dual analyte sensor that can detect Zn²⁺ cation and N₃^- anion independently. The NABI forms chelate with Zn²⁺ to inhibit internal charge transfer (ICT) and CHN isomerisation resulting chelation enhanced fluorescence (CHEF). On the other hand, the sensing of N₃^- is based on formation of supramolecular H-bonded rigid assembly. The association constant of NABI for Zn²⁺ and N₃^- ions are 19 × 10⁴ M^-1 and 11 × 10² M^-1, respectively. Corresponding limit of detections (LOD) are 6.85 × 10^-8 and 1.82 × 10^-7 M, respectively. NABI efficiently detects intracellular Zn²⁺ and N₃^- ions with no cytotoxicity on J774A.1cells under fluorescence microscope. DFT studies unlock underlying spectroscopic properties of free NABI and Zn²⁺/N₃^- bound forms.

The Construction of C-N, C-O, and C(sp2)-C(sp3) Bonds from Fluorine-Substituted 2-Aryl Benzazoles for Direct Synthesis of N-, O-, C-Functionalized 2-Aryl Benzazole Derivatives

Herein, a general and practical route to 2-(2-aminophenyl)- and 2-(2-alkoxyphenyl)-substituted benzazoles by nucleophilic aromatic substitution (S_NAr) is described. Upon treatment with Cs₂CO₃, the formation of C-N, C-O bonds occur between fluorine-substituted 2-aryl benzazoles and a diverse range of nitrogen, oxygen nucleophiles to provide the targets in good to excellent yields. Commercially available nucleophiles and high atom economy are notable features of the protocol. Meanwhile, the construction of C(sp²)-C(sp³) bond was also furnished in the presence of palladium catalyst.

Synthesis and Spectral Properties of a Novel Fluorescent Probe for Zn2+ Based on a Benzoxazole Fluorophore

A novel turn-on fluorescent probe containing a benzoxazole fluorophore has been synthesised and its response to different metal ions has been investigated by spectrometry. The probe was highly selective and sensitive to Zn2+ and showed a complexation ratio towards Zn2+ of 1:1. It also exhibited a linear response range for Zn2+ from 0.3 to 4.8 μmol L−1 with a detection limit of 0.36 μmol L−1.

Reaction-based ratiometric fluorescent probe for selective recognition of sulfide anions with a large Stokes shift through switching on ESIPT

Ratiometric fluorescent probe BNPT has been synthesized and characterized for S²⁻ sensing via ESIPT mechanism.

Synthesis and Spectral Studies of a Novel Benzoxazole-Derived Fluorescent Probe for Hg2+

A novel turn-off fluorescent probe bearing a benzoxazole fluorophore has been synthesised and characterised. Its recognition properties towards different metal ions have been researched by spectrometry. The probe was highly selective and sensitive to Hg2+ and showed a complexation ratio towards Hg2+ of 1:1. Its fluorescence intensity varied almost linearly with the concentration of Hg2+ (1.6~8.6 μmol L−1), and the detection limit of Hg2+ was estimated to be 0.68 μmol L−1.

Comparison of experimental and DFT-calculated NMR chemical shifts of 2-amino and 2-hydroxyl substituted phenyl benzimidazoles, benzoxazoles and benzothiazoles in four solvents using the IEF-PCM solvation model

A comparative study of experimental and calculated NMR chemical shifts of six compounds comprising 2-amino and 2-hydroxy phenyl benzoxazoles/benzothiazoles/benzimidazoles in four solvents is reported. The benzimidazoles showed interesting spectral characteristics, which are discussed. The proton and carbon chemical shifts were similar for all solvents. The largest chemical shift deviations were observed in benzene. The chemical shifts were calculated with density functional theory using a suite of four functionals and basis set combinations. The calculated chemical shifts revealed a good match to the experimentally observed values in most of the solvents. The mean absolute error was used as the primary metric. The use of an additional metric is suggested, which is based on the order of chemical shifts. The DP4 probability measures were also used to compare the experimental and calculated chemical shifts for each compound in the four solvents. Copyright © 2015 John Wiley & Sons, Ltd.

Deciphering the CHEF-PET-ESIPT liaison mechanism in a Zn2+ chemosensor and its applications in cell imaging study

Proper fusion of fluorescence mechanisms in a single fluorophore unit is highly desirable to obtain better sensitivity, as well as selectivity towards a particular metal ion.

A novel triphenylamine-BODIPY dendron: click synthesis, near-infrared emission and a multi-channel chemodosimeter for Hg2+ and Fe3+

A novel near-infrared emission triphenylamine-BODIPY dendron for Hg²⁺ and Fe³⁺ detection, fluorescent nanoparticle and living cell imaging.

Synthesis, Crystal Structure and Fluorescent Properties of a Novel Benzothiazole-Derived Fluorescent Probe for Zn2+

A novel turn-on fluorescent probe containing a benzothiazole fluorophore has been synthesised and its structure confirmed by single crystal X-ray diffraction. The probe exhibited high selectivity to Zn2+ over other metal ions and demonstrated high sensitivity for Zn2+ with a 12-fold fluorescence enhancement. It also showed a fast response to Zn2+ and a complexation ratio towards Zn2+ of 1:1.

Quinoline benzimidazole-conjugate for the highly selective detection of Zn(ii) by dual colorimetric and fluorescent turn-on responses

A quinoline benzimidazole-conjugate (QBC) has been synthesized for the highly selective detection of Zn(ii) both by colorimetry and fluorimetry.

A novel BODIPY-Schiff base-based colorimetric and fluorometric dosimeter for Hg2+, Fe3+ and Au3+

A simple Schiff base-based multi-targets dosimeter for Hg²⁺, Fe³⁺ and Au³⁺ has been reported.

Engineering a DNA-cleaving DNAzyme and PCR into a simple sensor for zinc ion detection

The development of a simple sensor (9NL27-Zn) based on DNAzyme and PCR and aimed at the detection of low concentrations of zinc (II) ions is described. A specific Zn(II)-dependent DNAzyme (9NL27) with DNA-cleaving activity was employed. In the presence of zinc (II), the DNAzyme hydrolyzed DNA substrate into two pieces (5' and 3' fragments), forming 3'-terminal hydroxyl in the 5' fragment and 5'-phosphate in the 3' fragments. Subsequently, the 5' fragment left the DNAzyme and bound a short DNA template. The 5' fragment was used as a primer and extended a single-stranded full-length template by Taq polymerase. Finally, this full-length template was amplified by PCR. The amplified products had a quantitative relationship with Zn(II) concentration. Under our experimental conditions, the DNA sensor showed sensitivity (10 nM) and high specificity for zinc ion detection. After improvement of the DNA sensor, the detection limit can reach 1 nM. The simple DNA sensor may become a DNA model for the detection of trace amounts of other targets.

Relay recognition of Cu2+ and S2- in water by a simple 2-(2'-aminophenyl)benzimidazole derivatized fluorescent sensor through modulating ESIPT

A new 2-(2'-aminophenyl)benzimidazole (2-APBI) derivatized fluorescent sensor (L) that behaves relay recognition of Cu(2+) and S(2-) in water solution (pH 7.4) has been developed. Sensor L displays excited-state intramolecular proton transfer (ESIPT) featured two emission bands and performs highly selective and sensitive recognition to Cu(2+) through two emissions simultaneous quenching. The on-site formed L-Cu(2+) complex exhibits excellent selectivity to S(2-) with fluorescence "off-on" response via Cu(2+) displacement approach, which exerts ESIPT recovery. Thus, through modulation the ESIPT state of sensor L, relay recognition of Cu(2+) and S(2-) in water has been achieved.

Identification of Small-Molecule Frequent Hitters from AlphaScreen High-Throughput Screens

Although small-molecule drug discovery efforts have focused largely on enzyme, receptor, and ion-channel targets, there has been an increase in such activities to search for protein-protein interaction (PPI) disruptors by applying high-throughout screening (HTS)–compatible protein-binding assays. However, a disadvantage of these assays is that many primary hits are frequent hitters regardless of the PPI being investigated. We have used the AlphaScreen technology to screen four different robust PPI assays each against 25,000 compounds. These activities led to the identification of 137 compounds that demonstrated repeated activity in all PPI assays. These compounds were subsequently evaluated in two AlphaScreen counter assays, leading to classification of compounds that either interfered with the AlphaScreen chemistry (60 compounds) or prevented the binding of the protein His-tag moiety to nickel chelate (Ni²⁺-NTA) beads of the AlphaScreen detection system (77 compounds). To further triage the 137 frequent hitters, we subsequently confirmed by a time-resolved fluorescence resonance energy transfer assay that most of these compounds were only frequent hitters in AlphaScreen assays. A chemoinformatics analysis of the apparent hits provided details of the compounds that can be flagged as frequent hitters of the AlphaScreen technology, and these data have broad applicability for users of these detection technologies.

8-Aminoquinoline-based ratiometric zinc probe: unexpected binding mode and its application in living cells

PMQA, an 8-aminoquinoline-based ratiometric fluorescent sensor, demonstrates the Zn(2+)-induced red-shift of emission (85nm), and was successfully applied to image zinc in living cells. Compared to 2:1 stoichiometry in PMQA-Zn(2+), PMQA-Cu(2+) shows 1:1 composition. Both nitrogen atoms from the aminoquinoline are missing in binding of zinc, while they are critically involved in Cu(2+) chelation. The structure difference between PMQA-Zn(2+) and PMQA-Cu(2+) might shed light in designing novel zinc probes without suffering from copper interference.

Substituent-dependent fluorescent sensors for zinc ions based on carboxamidoquinoline

A series of carboxamidoquinoline-based fluorescent sensors (the AQZ family) were synthesized and characterized. The AQZ family members were highly soluble in water and showed good selectivity for Zn(2+)via enhanced fluorescence in aqueous buffer solution. Fluorescence signals could be tuned from dual-wavelength ratiometric changes to changes in the intensity of a single wavelength upon binding Zn(2+) through the introduction of different substituents onto the quinoline ring. Concentrations of free Zn(2+) of 10(-5)-10(-6) M could be detected using the sensors. Changes of substituents and their positions on the quinoline ring influenced the sensitivity for Zn(2+), but had little effect on Zn(2+) affinities.