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Wang Z, Li H, Wang P, Zhu J, Yang Z, Liu Y. Comparison of anaerobic co-digestion of vacuum toilet blackwater and kitchen waste under mesophilic and thermophilic conditions: Reactor performance, microbial response and metabolic pathway. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 366:121725. [PMID: 38971070 DOI: 10.1016/j.jenvman.2024.121725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Revised: 06/20/2024] [Accepted: 07/02/2024] [Indexed: 07/08/2024]
Abstract
Co-digestion of kitchen waste (KW) and black water (BW) can be considered as an attractive method to efficiently achieve the clean energy from waste. To find the optimal operation parameters for the co-digestion, the effects of different temperatures (35 and 55 °C) and BW:KW ratios on the reactor performances, microbial communities and metabolic pathways were studied. The results showed that the optimum BW:KW ratio was 1:3.6 and 1:4.5 for mesophilic and thermophilic optimal reactors, with methane production of 449.04 mL/g VS and 411.90 mL/g VS, respectively. Microbial communities showed significant differences between the reactors under different temperatures. For bacteria, increasing BW:KW ratio significantly promoted Defluviitoga enrichment (1.1%-9.5%) under thermophilic condition. For Archaea, the increase in BW:KW ratio promoted the enrichment of Methanosaeta (8.6%-56.4%) in the mesophilic reactor and Methanothermobacter (62.0%-89.2%) in the thermophilic reactor. The analysis of the key enzymes showed that, acetoclastic methanogenic pathway performed as the dominant under mesophilic condition, with high abundance of Acetate-CoA ligase (EC:6.2.1.1) and Pyruvate synthase (EC:1.2.7.1). Hydrogenotrophic methanogenic pathway was the main pathway in the thermophilic reactors, with high abundance of Formylmethanofuran dehydrogenase (EC:1.2.99.5).
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Affiliation(s)
- Ziang Wang
- Department of Environmental Science and Engineering, Beijing University of Chemical Technology, Beijing 100029, China
| | - Haixiang Li
- Technical Centre for Soil, Agriculture and Rural Ecology and Environment, Ministry of Ecology and Environment, Beijing, 100012, China
| | - Pingbo Wang
- Hangzhou EXPEC Technology Co., Ltd., Hangzhou 310000, China
| | - Jia Zhu
- Shenzhen Key Laboratory of Industrial Water Saving and Urban Sewage Resources, School of Construction and Environmental Engineering, Shenzhen Polytechnic, 518115, China
| | - Ziyi Yang
- Department of Environmental Science and Engineering, Beijing University of Chemical Technology, Beijing 100029, China.
| | - Yanping Liu
- Department of Environmental Science and Engineering, Beijing University of Chemical Technology, Beijing 100029, China.
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Khomyakova MA, Merkel AY, Slobodkin AI. Anaerobaca lacustris gen. nov., sp. nov., an obligately anaerobic planctomycete of the widespread SG8-4 group, isolated from a coastal lake, and proposal of Anaerobacaceae fam. nov. Syst Appl Microbiol 2024; 47:126522. [PMID: 38852331 DOI: 10.1016/j.syapm.2024.126522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Revised: 05/31/2024] [Accepted: 06/03/2024] [Indexed: 06/11/2024]
Abstract
One of the numerous and widespread lineages of planctomycetes is the hitherto uncultured SG8-4 group inhabiting anoxic environments. A novel anaerobic, mesophilic, alkalitolerant, chemoorganotrophic bacterium (strain M17dextrT) was isolated from anaerobic sediment of a coastal lake (Taman Peninsula, Russia). The cell were mainly non-motile cocci, 0.3 to 1.0 µm in diameter forming chains or aggregates. The cells had a Gram-negative cell wall and divided by binary fission. The temperature range for growth was 20-37 0C (optimum at 30 0C). The pH range for growth was 6.5-10.0, with an optimum at pH 8.0-8.5. Strain M17dextrT fermented mono-, di- and polysaccharides (starch, xanthan gum, dextran, N-acetylglucosamine), but did not utilized proteinaceous compounds. Major cellular fatty acids were C16:0 and C18:0. The genome of strain M17dextrT had a size of 5.7 Mb with a G + C content of 62.49 %. The genome contained 345 CAZyme genes. The closest cultured phylogenetic relatives of strain M17dextrT were members of the order Sedimentisphaerales, class Phycisphaerae. Among characterized planctomycetes, the highest 16S rRNA gene sequence similarity (88.3 %) was observed with Anaerohalosphaera lusitana. According to phylogenomic analysis strain M17dextrT together with many uncultured representatives of Sedimentisphaerales forms a separate family-level lineage. We propose to assign strain M17dextrT to a novel genus and species, Anaerobaca lacustris gen. nov., sp. nov.; the type strain is M17dextrT (=VKM B-3571 T = DSM 113417 T = JCM 39238 T = KCTC 25381 T = UQM 41474 T). This genus is placed in a novel family, Anaerobacaceae fam. nov. within the order Sedimentisphaerales.
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Affiliation(s)
- M A Khomyakova
- Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, Leninskiy Prospect, 33, bld. 2, 119071, Moscow, Russia.
| | - A Y Merkel
- Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, Leninskiy Prospect, 33, bld. 2, 119071, Moscow, Russia
| | - A I Slobodkin
- Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, Leninskiy Prospect, 33, bld. 2, 119071, Moscow, Russia
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Pandey P, Chowdhury D, Wang Y. Denaturing Gradient Gel Electrophoresis Approach for Microbial Shift Analysis in Thermophilic and Mesophilic Anaerobic Digestions. Gels 2024; 10:339. [PMID: 38786256 PMCID: PMC11120850 DOI: 10.3390/gels10050339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 05/12/2024] [Accepted: 05/13/2024] [Indexed: 05/25/2024] Open
Abstract
To determine the evolution of microbial community and microbial shift under anaerobic processes, this study investigates the use of denaturing gradient gel electrophoresis (DGGE). In the DGGE, short- and medium-sized DNA fragments are separated based on their melting characteristics, and this technique is used in this study to understand the dominant bacterial community in mesophilic and thermophilic anaerobic digestion processes. Dairy manure is known for emitting greenhouse gases (GHGs) such as methane, and GHG emissions from manure is a biological process that is largely dependent on the manure conditions, microbial community presence in manure, and their functions. Additional efforts are needed to understand the GHG emissions from manure and develop control strategies to minimize the biological GHG emissions from manure. To study the microbial shift during anaerobic processes responsible for GHG emission, we conducted a series of manure anaerobic digestion experiments, and these experiments were conducted in lab-scale reactors operated under various temperature conditions (28 °C, 36 °C, 44 °C, and 52 °C). We examined the third variable region (V3) of the 16S rRNA gene fingerprints of bacterial presence in anaerobic environment by PCR amplification and DGGE separation. Results showed that bacterial community was affected by the temperature conditions and anaerobic incubation time of manure. The microbial community structure of the original manure changed over time during anaerobic processes, and the community composition changed substantially with the temperature of the anaerobic process. At Day 0, the sequence similarity confirmed that most of the bacteria were similar (>95%) to Acinetobacter sp. (strain: ATCC 31012), a Gram-negative bacteria, regardless of temperature conditions. At day 7, the sequence similarity of DNA fragments of reactors (28 °C) was similar to Acinetobacter sp.; however, the DNA fragments of effluent of reactors at 44 °C and 52 °C were similar to Coprothermobacter proteolyticus (strain: DSM 5265) (similarity: 97%) and Tepidimicrobium ferriphilum (strain: DSM 16624) (similarity: 100%), respectively. At day 60, the analysis showed that DNA fragments of effluent of 28 °C reactor were similar to Galbibacter mesophilus (strain: NBRC 10162) (similarity: 87%), and DNA fragments of effluent of 36 °C reactors were similar to Syntrophomonas curvata (strain: GB8-1) (similarity: 91%). In reactors with a relatively higher temperature, the DNA fragments of effluent of 44 °C reactor were similar to Dielma fastidiosa (strain: JC13) (similarity: 86%), and the DNA fragments of effluent of 52 °C reactor were similar to Coprothermobacter proteolyticus (strain: DSM 5265) (similarity: 99%). To authors' knowledge, this is one of the few studies where DGGE-based approach is utilized to study and compare microbial shifts under mesophilic and thermophilic anaerobic digestions of manure simultaneously. While there were challenges in identifying the bands during gradient gel electrophoresis, the joint use of DGGE and sequencing tool can be potentially useful for illustrating and comparing the change in microbial community structure under complex anaerobic processes and functionality of microbes for understanding the consequential GHG emissions from manure.
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Affiliation(s)
- Pramod Pandey
- Department of Population Health and Reproduction, University of California-Davis, Davis, CA 95616, USA; (D.C.); (Y.W.)
| | - Dhrubajyoti Chowdhury
- Department of Population Health and Reproduction, University of California-Davis, Davis, CA 95616, USA; (D.C.); (Y.W.)
- Department of Life Sciences, School of Science, Gandhi Institute of Technology and Management, Rushikonda, Visakhapatnam 530045, Andhra Pradesh, India
| | - Yi Wang
- Department of Population Health and Reproduction, University of California-Davis, Davis, CA 95616, USA; (D.C.); (Y.W.)
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Valentin MT, Luo G, Zhang S, Białowiec A. Direct interspecies electron transfer mechanisms of a biochar-amended anaerobic digestion: a review. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2023; 16:146. [PMID: 37784139 PMCID: PMC10546780 DOI: 10.1186/s13068-023-02391-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 09/09/2023] [Indexed: 10/04/2023]
Abstract
This paper explores the mechanisms of biochar that facilitate direct interspecies electron transfer (DIET) among syntrophic microorganisms leading to improved anaerobic digestion. Properties such as specific surface area (SSA), cation exchange capacity (CEC), presence of functional groups (FG), and electrical conductivity (EC) were found favorable for increased methane production, reduction of lag phase, and adsorption of inhibitors. It is revealed that these properties can be modified and are greatly affected by the synthesizing temperature, biomass types, and residence time. Additionally, suitable biochar concentration has to be observed since dosage beyond the optimal range can create inhibitions. High organic loading rate (OLR), pH shocks, quick accumulation and relatively low degradation of VFAs, and the presence of heavy metals and toxins are the major inhibitors identified. Summaries of microbial community analysis show fermentative bacteria and methanogens that are known to participate in DIET. These are Methanosaeta, Methanobacterium, Methanospirillum, and Methanosarcina for the archaeal community; whereas, Firmicutes, Proteobacteria, Synergistetes, Spirochetes, and Bacteroidetes are relatively for bacterial analyses. However, the number of defined cocultures promoting DIET is very limited, and there is still a large percentage of unknown bacteria that are believed to support DIET. Moreover, the instantaneous growth of participating microorganisms has to be validated throughout the process.
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Affiliation(s)
- Marvin T. Valentin
- Department of Applied Bioeconomy, Wrocław University of Environmental and Life Sciences, 51-630 Wroclaw, Poland
- Department of Science and Technology, Engineering and Industrial Research, National Research Council of the Philippines, Taguig, Philippines
- Benguet State University, Km. 5, La Trinidad, 2601 Benguet, Philippines
| | - Gang Luo
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP3), Department of Environmental Science and Engineering, Fudan University, Shanghai, 200433 China
- Shanghai Technical Service Platform for Pollution Control and Resource Utilization of Organic Wastes, Shanghai, 200438 China
- Shanghai Institute of Pollution Control and Ecological Security, Shanghai, 200092 China
| | - Shicheng Zhang
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP3), Department of Environmental Science and Engineering, Fudan University, Shanghai, 200433 China
- Shanghai Technical Service Platform for Pollution Control and Resource Utilization of Organic Wastes, Shanghai, 200438 China
- Shanghai Institute of Pollution Control and Ecological Security, Shanghai, 200092 China
| | - Andrzej Białowiec
- Department of Applied Bioeconomy, Wrocław University of Environmental and Life Sciences, 51-630 Wroclaw, Poland
- Department of Agricultural and Biosystems Engineering, Iowa State University, 605 Bissell Road, Ames, IA 50011 USA
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5
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Kieft B, Finke N, McLaughlin RJ, Nallan AN, Krzywinski M, Crowe SA, Hallam SJ. Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater. Nat Commun 2023; 14:5380. [PMID: 37666802 PMCID: PMC10477309 DOI: 10.1038/s41467-023-40907-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 08/15/2023] [Indexed: 09/06/2023] Open
Abstract
Anaerobic digestion of municipal mixed sludge produces methane that can be converted into renewable natural gas. To improve economics of this microbial mediated process, metabolic interactions catalyzing biomass conversion to energy need to be identified. Here, we present a two-year time series associating microbial metabolism and physicochemistry in a full-scale wastewater treatment plant. By creating a co-occurrence network with thousands of time-resolved microbial populations from over 100 samples spanning four operating configurations, known and novel microbial consortia with potential to drive methane production were identified. Interactions between these populations were further resolved in relation to specific process configurations by mapping metagenome assembled genomes and cognate gene expression data onto the network. Prominent interactions included transcriptionally active Methanolinea methanogens and syntrophic benzoate oxidizing Syntrophorhabdus, as well as a Methanoregulaceae population and putative syntrophic acetate oxidizing bacteria affiliated with Bateroidetes (Tenuifilaceae) expressing the glycine cleavage bypass of the Wood-Ljungdahl pathway.
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Affiliation(s)
- Brandon Kieft
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
| | - Niko Finke
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
| | - Ryan J McLaughlin
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
- Graduate Program in Bioinformatics, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada
| | - Aditi N Nallan
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
- Graduate Program in Bioinformatics, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada
| | - Martin Krzywinski
- Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, V5Z 4S6, Canada
| | - Sean A Crowe
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
- Department of Earth, Ocean, and Atmospheric Sciences, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada
| | - Steven J Hallam
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, V6T 1Z1, Canada.
- Graduate Program in Bioinformatics, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.
- Genome Science and Technology Program, University of British Columbia, 2329 West Mall, Vancouver, BC, V6T 1Z4, Canada.
- Bradshaw Research Institute for Minerals and Mining (BRIMM), University of British Columbia, Vancouver, BC, V6T1Z4, Canada.
- Life Sciences Institute, University of British Columbia, Vancouver, BC, V6T 1Z3, Canada.
- ECOSCOPE Training Program, University of British Columbia, Vancouver, BC, V6T 1Z3, Canada.
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Liu X, Lee C, Kim JY. Comparison of mesophilic and thermophilic anaerobic digestions of thermal hydrolysis pretreated swine manure: Process performance, microbial communities and energy balance. J Environ Sci (China) 2023; 126:222-233. [PMID: 36503751 DOI: 10.1016/j.jes.2022.03.032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Revised: 03/17/2022] [Accepted: 03/17/2022] [Indexed: 06/17/2023]
Abstract
Anaerobic digestion (AD) of swine manure (SM) commonly shows low biogas output and unsatisfactory economic performance. In this study, thermophilic AD (TAD, 50 ± 1 °C) was combined with thermal hydrolysis pretreatment (THP, 170 °C/10 bar), to investigate its potential for maximizing biogas yield, securing successful digestion and microbial diversity, as well as improving energy balance. Four lab-scale continuously stirred tank reactors were operated for 300 days and compared with each other, i.e., reactor 1 (raw SM fed in mesophilic AD: RSM-MAD), reactor 2 (THP-treated SM fed in MAD: TSM-MAD), reactor 3 (RSM-TAD), and reactor 4 (TSM-TAD). The results showed that THP was efficient to increase methane production of SM, TSM-TAD mode led to the highest methane yield (129.8 ± 40.5 mL-CH4/g-VS/day) among the tests (p < 0.05). Although TAD was more likely to induce free ammonia (> 700 mg/L) or volatile fatty acids (> 6000 mg/L) accumulation compared with MAD in start-up phase, TSM-TAD treatment mode behaved a sustainable digestion process in a long-term operation. For TSM-TAD scenario, higher Shannon-Weaver (3.873) and lower Simpson index (0.061) indicated this mode ensured and enlarged the diversity of bacteria communities. Phylum Bathyarchaeota was dominant (59.3%-90.0%) in archaea community, followed by Euryarchaeota in the four reactors. RSM-MAD treatment mode achieved the highest energy output (4.65 GJ/day), TSM-TAD was less effective (-17.38 GJ/day) due to increased energy demands. Thus improving the energetic efficiency of THP units is recommended for the development of TSM-TAD treatment mode.
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Affiliation(s)
- Xiaohui Liu
- Department of Civil and Environmental Engineering, Seoul National University, Seoul 08826, Korea
| | - Changmin Lee
- Department of Civil and Environmental Engineering, Seoul National University, Seoul 08826, Korea
| | - Jae Young Kim
- Department of Civil and Environmental Engineering, Seoul National University, Seoul 08826, Korea.
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Li F, Ghanizadeh H, Cui G, Liu J, Miao S, Liu C, Song W, Chen X, Cheng M, Wang P, Zhang Y, Wang A. Microbiome - based agents can optimize composting of agricultural wastes by modifying microbial communities. BIORESOURCE TECHNOLOGY 2023; 374:128765. [PMID: 36822555 DOI: 10.1016/j.biortech.2023.128765] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 02/16/2023] [Accepted: 02/17/2023] [Indexed: 06/18/2023]
Abstract
Microorganisms that facilitate the decomposition of agricultural wastes are of importance during composting processes. Here, we assessed if microbial agents, comprising Clonostachys rosea, Bacillus amylolyticus and Rhodospirillum photometricum can facilitate the decomposition of a compost mix of vegetable waste, chicken manure, sawdust, and biochar. The results showed that inoculating the compost mix with the microbial agents elevated the compost temperature, increased the thermophilic period, and enhanced cellulose degradation. Microbial agent inoculation also changed the diversity and richness of decomposing microbial communities. Among the microbial agents, the mixture of C. rosea and B. amylolyticus performed better than other mixtures. Taken together, the results confirmed that the microbial agents comprising C. rosea can enhance the composting process by ameliorating the physiochemical conditions of agricultural wastes and promoting the diversity and proliferation of beneficial bacteria involved in the decomposition of cellulose.
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Affiliation(s)
- Fengshuo Li
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Hossein Ghanizadeh
- School of Agriculture and Environment, Massey University, Palmerston North 4442, New Zealand
| | - Guangliang Cui
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Jiayin Liu
- College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Shuang Miao
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Chang Liu
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Wenwei Song
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Xiuling Chen
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Mozhen Cheng
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Peiwen Wang
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China
| | - Yao Zhang
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China
| | - Aoxue Wang
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China; College of Life Sciences, Northeast Agricultural University, Harbin 150030, China.
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A Review of Basic Bioinformatic Techniques for Microbial Community Analysis in an Anaerobic Digester. FERMENTATION-BASEL 2023. [DOI: 10.3390/fermentation9010062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Biogas production involves various types of intricate microbial populations in an anaerobic digester (AD). To understand the anaerobic digestion system better, a broad-based study must be conducted on the microbial population. Deep understanding of the complete metagenomics including microbial structure, functional gene form, similarity/differences, and relationships between metabolic pathways and product formation, could aid in optimization and enhancement of AD processes. With advancements in technologies for metagenomic sequencing, for example, next generation sequencing and high-throughput sequencing, have revolutionized the study of microbial dynamics in anaerobic digestion. This review includes a brief introduction to the basic process of metagenomics research and includes a detailed summary of the various bioinformatics approaches, viz., total investigation of data obtained from microbial communities using bioinformatics methods to expose metagenomics characterization. This includes (1) methods of DNA isolation and sequencing, (2) investigation of anaerobic microbial communities using bioinformatics techniques, (3) application of the analysis of anaerobic microbial community and biogas production, and (4) restriction and prediction of bioinformatics analysis on microbial metagenomics. The review has been concluded, giving a summarized insight into bioinformatic tools and also promoting the future prospects of integrating humungous data with artificial intelligence and neural network software.
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Mohan C, Annachhatre A. Facilitation of interspecies electron transfer in anaerobic processes through pine needle biochar. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2022; 86:2197-2212. [PMID: 36378175 DOI: 10.2166/wst.2022.316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Role of biochar in promoting methanogenesis during anaerobic processes was investigated in this research. Biochar produced from Himalayan pine needles was used as medium for conductive material mediated interspecies electron transfer (CM-IET) amongst the electron producing microorganisms and electron consuming methanogenic archaea. Three anaerobic continuous stirrer tank reactors (CSTRs) with 0, 5 and 10 g/L pine needle biochar (PNB) were operated at steady state organic loading rate (OLR) of 2.0-2.5 kgCOD/(m3.d). R0 (0 g/L PNB), representing indirect interspecies electron transfer (IIET), failed at an OLR of 2.0 kgCOD/(m3.d) due to the highest volatile fatty acid (VFA) concentration of 6,300 mg/L among the three CSTRs. On the other hand, at an OLR of 2.5 kgCOD/(m3.d), R2 (10 g/L PNB) showed the most superior performance with chemical oxygen demand (COD) removal of 55% and volatile fatty acid (VFA) concentration of 3,500 mg/L, while R1 (5 g/L PNB) recorded COD removal of 45% and VFA concentration of 4,400 mg/L. In comparison, fixed biofilm reactor (FBR) with 80 g/L of PNB as support material operated satisfactorily at OLR of 13.8 kgCOD/(m3.d) with 70% COD removal and VFA concentration of 1,400 mg/L. These investigations confirmed the beneficial role of biochar in anaerobic processes by promoting CM-IET amongst VFA degrading bacteria and methane producing archaea.
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Affiliation(s)
- Chander Mohan
- Indian Institute of Technology, Mandi, Himachal Pradesh 175005, India E-mail:
| | - Ajit Annachhatre
- Indian Institute of Technology, Mandi, Himachal Pradesh 175005, India E-mail:
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Zhou L, Liu X, Li X, He X, Xiong X, Lai J. Epidermal Barrier Integrity is Associated with Both Skin Microbiome Diversity and Composition in Patients with Acne Vulgaris. CLINICAL, COSMETIC AND INVESTIGATIONAL DERMATOLOGY 2022; 15:2065-2075. [PMID: 36196252 PMCID: PMC9527004 DOI: 10.2147/ccid.s377759] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Accepted: 09/14/2022] [Indexed: 11/23/2022]
Abstract
Background Although the changed lipid environment of the pilosebaceous unit and the growth of lipophilic Cutibacterium acnes (C. acnes) during puberty has long been considered as the trigger of acne vulgaris, the involvement of the interaction between the epidermal barrier integrity and the skin microbiome in this disease has not been fully elucidated. Objective The aim of this study was to analyze the differences in the epidermal barrier and skin microbiota in patients with acne vulgaris and their correlation. Methods The skin microbial samples and epidermal barrier data from 74 acne patients and 19 healthy subjects were collected in this cross-sectional study. The microbial diversity was analyzed based on a high-throughput sequencing approach that targets the V3-V4 region of the bacteria 16S ribosomal RNA genes. Results Compared with healthy controls, acne patients had significantly increased transepidermal water loss (TEWL), pH levels, sebum, porphyrins, and red areas, and reduced skin microbiome diversity according to the goods coverage diversity index (p = 0.021), Shannon diversity index (p = 0.037), and Simpson diversity index (p = 0.023). Moreover, the diversity gradually decreased with the increase in acne grading. Based on the principal coordinate analysis (PCoA) analysis plot, the skin microbiota of acne patients and healthy controls could be divided into two different sets, which could not be used to separate acne patients with different disease severity. Finally, this study found that both TEWL and sebum were negatively associated with the Shannon and Simpson diversity index. Meanwhile, the taxa Enhydrobacter and Stenotrophomonas were positively associated with TEWL, stratum corneum hydration, respectively. Conclusion This study demonstrated that acne vulgaris exists in patients with both damaged epithelial barriers and associated microbiota dysbiosis; the findings will help improve the understanding of the disease and may contribute to the development of better treatment options.
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Affiliation(s)
- Lin Zhou
- Department of Dermatology & STD, The Affiliated Hospital of Southwest Medical University, Luzhou, People’s Republic of China
| | - Xueping Liu
- Department of Dermatology & STD, The Affiliated Hospital of Southwest Medical University, Luzhou, People’s Republic of China
| | - Xulin Li
- Department of Dermatology & STD, The Affiliated Hospital of Southwest Medical University, Luzhou, People’s Republic of China
| | - Xiangyan He
- Department of Dermatology & STD, The Affiliated Hospital of Southwest Medical University, Luzhou, People’s Republic of China
| | - Xia Xiong
- Department of Dermatology & STD, The Affiliated Hospital of Southwest Medical University, Luzhou, People’s Republic of China
| | - Jingdong Lai
- Department of Dermatology & STD, Suining First People’s Hospital, Suining, People’s Republic of China
- Correspondence: Jingdong Lai; Xia Xiong, Tel +86-13679670608; +86-13608282035, Fax +86-08303165651; +86-08303165232, Email ;
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11
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Qian J, Zhang Y, Wang P, Lu B, He Y, Tang S, Yi Z. Light alters microbiota and electron transport: Evidence for enhanced mesophilic digestion of municipal sludge. WATER RESEARCH 2022; 217:118447. [PMID: 35429889 DOI: 10.1016/j.watres.2022.118447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Revised: 04/06/2022] [Accepted: 04/08/2022] [Indexed: 06/14/2023]
Abstract
Light as an environmental factor can affect the process of anaerobic digestion, but there is no systematic study in municipal wastewater sludge mesophilic digestion. In this study, the effects of light on the performance of the anaerobic digestion system and photo-anaerobic microbiota (PAM) were evaluated in lighted anaerobic batch digesters (LABRs). The methane yield from the reactor under the dark condition (LABR0) was 179.2 mL CH4/g COD, which was lower than 305.4 mL CH4/g COD and 223.0 mL CH4/g COD (n = 3, p < 0.05) from reactors under the light intensity of 3600 lm (LABR1) and 7200 lm (LABR2), respectively. The dominant genera in the bacterial and archaeal communities were Bacillus and Methanosarcina under light conditions, Enterococcus and Methanobacterium under dark conditions. And these two bacteria acted as electroactive bacterial genera, indicating that light changes the combination of direct interspecies electron transfer (DIET) microbial partners and activates the DIET pathway for methane production. The electron conduction pathways analysis further suggests that biological DIET (bDIET) between microbial biomass, rather than DIET via conductive material (cDIET) between microbes and conductive materials, is promoted and behaves as the dominant factor enhancing methane production under light conditions. The morphology of microorganisms and the amount and properties of EPS corroborate these views. Our findings are guided to anaerobic digester constructions under the outdoor environment with light exposure.
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Affiliation(s)
- Jin Qian
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China.
| | - Yuhang Zhang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
| | - Peifang Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
| | - Bianhe Lu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
| | - Yuxuan He
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
| | - Sijing Tang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
| | - Ziyang Yi
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing 210098, P. R. China; College of Environment, Hohai University, Nanjing 210098, P. R. China
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12
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Biogas Production and Microbial Communities of Mesophilic and Thermophilic Anaerobic Co-Digestion of Animal Manures and Food Wastes in Costa Rica. ENERGIES 2022. [DOI: 10.3390/en15093252] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
Biomass generated from agricultural operations in Costa Rica represents an untapped renewable resource for bioenergy generation. This study investigated the effects of two temperatures and three mixture ratios of manures and food wastes on biogas production and microbial community structure. Increasing the amount of fruit and restaurant wastes in the feed mixture significantly enhanced the productivity of the systems (16% increase in the mesophilic systems and 41% in the thermophilic). The methane content of biogas was also favored at higher temperatures. Beta diversity analysis, based on high-throughput sequencing of 16S rRNA gene, showed that microbial communities of the thermophilic digestions were more similar to each other than the mesophilic digestions. Species richness of the thermophilic digestions was significantly greater than the corresponding mesophilic digestions (F = 40.08, p = 0.003). The mesophilic digesters were dominated by Firmicutes and Bacteroidetes while in thermophilic digesters, the phyla Firmicutes and Chloroflexi accounted for up to 90% of all sequences. Methanosarcina represented the key methanogen and was more abundant in thermophilic digestions. These results demonstrate that increasing digestion temperature and adding food wastes can alleviate the negative impact of low C:N ratios on anaerobic digestion.
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13
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Jadhav P, Bin Khalid Z, Mishra P, Bin Abd Wahid Z, Nasrullah M. Challenges and emerging approaches in life cycle assessment of engineered nanomaterials usage in anaerobic bioreactor. TECHNO-ECONOMICS AND LIFE CYCLE ASSESSMENT OF BIOREACTORS 2022:207-222. [DOI: 10.1016/b978-0-323-89848-5.00004-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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14
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Kim NK, Lee SH, Kim Y, Park HD. Current understanding and perspectives in anaerobic digestion based on genome-resolved metagenomic approaches. BIORESOURCE TECHNOLOGY 2022; 344:126350. [PMID: 34813924 DOI: 10.1016/j.biortech.2021.126350] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/09/2021] [Accepted: 11/11/2021] [Indexed: 06/13/2023]
Abstract
Anaerobic digestion (AD) is a technique that can be used to treat high concentrations of various organic wastes using a consortium of functionally diverse microorganisms under anaerobic conditions. Methane gas, a beneficial by-product of the AD process, is a renewable energy source that can replace fossil fuels following purification. However, detailed functional roles and metabolic interactions between microbial populations involved in organic waste removal and methanogenesis are yet to be known. Recent metagenomic approaches based on advanced high-throughput sequencing techniques have enabled the exploration of holistic microbial taxonomy and functionality of complex microbial populations involved in the AD process. Gene-centric and genome-centric analyses based on metagenome-assembled genomes are a platform that can be used to study the composition of microbial communities and their roles during AD. This review looks at how these up-to-date metagenomic analyses can be applied to promote our understanding and improved the development of the AD process.
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Affiliation(s)
- Na-Kyung Kim
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Sang-Hoon Lee
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Yonghoon Kim
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Hee-Deung Park
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea.
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15
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Chu YX, Wang J, Tian G, He R. Reduction in VOC emissions by intermittent aeration in bioreactor landfills with gas-water joint regulation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 290:118059. [PMID: 34488158 DOI: 10.1016/j.envpol.2021.118059] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Revised: 08/17/2021] [Accepted: 08/25/2021] [Indexed: 06/13/2023]
Abstract
Landfill mining and reclamation is a new strategy for addressing the lack of space available for new landfills and realizing the sustainable development of landfills. A gas-water joint bioreactor landfill is regulated by injecting water and/or recirculating leachate, and a blasting aeration system to optimize waste stabilization. In this study, four landfill reactors were constructed to investigate the effects of ventilation methods, including continuous (20 h d-1) and intermittent aeration (4 h d-1 in continuous or 2-h aeration per 12 h, twice a day), on the degradation of organic matter and volatile organic compound (VOC) emissions in comparison with traditional landfills. A total of 62 VOCs were detected in the landfill reactors. Among them, halogenated compounds had the highest abundance (39.8-65.4 %), followed by oxygenated compounds, alkanes and alkenes, and aromatic compounds. Both intermittent and continuous aeration could accelerate the degradation of landfilled waste and increase the volatilization rate of VOCs. Compared with intermittent aeration, the degradation of landfilled waste was more quickly in the landfill reactor with continuous aeration. However, intermittent aeration could create anaerobic-anoxic-aerobic conditions, which were conducive to the growth and metabolism of anaerobic and aerobic microorganisms in landfills and thereby reduced more than 63.4 % of total VOC emissions from the landfill reactor with continuous aeration. Moreover, intermittent aeration could reduce the ventilation rate and decrease the cost of aeration by 80 % relative to continuous aeration. Firmicutes, Bacteroidetes, Proteobacteria and Tenericutes predominated in the landfill reactors. The environmental variables including organic matter and VOCs concentrations had significant influences on microbial community structure in the landfilled waste. These findings indicated that intermittent aeration was an effective way to accelerate the stabilization of landfilled waste and reduce the cost and environmental risks in bioreactor landfills with gas-water joint regulation.
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Affiliation(s)
- Yi-Xuan Chu
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China
| | - Jing Wang
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China
| | - Guangming Tian
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, China
| | - Ruo He
- Zhejiang Provincial Key Laboratory of Solid Waste Treatment and Recycling, School of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou, 310012, China; College of Environmental and Resource Science, Zhejiang University, Hangzhou, 310058, China.
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16
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Wang M, Chen H, Chang S. Linkage among the combined temperature-retention time condition, microbial interaction, community structure, and process performance in the hydrolysis of waste activated sludge. BIORESOURCE TECHNOLOGY 2021; 331:125029. [PMID: 33831728 DOI: 10.1016/j.biortech.2021.125029] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2021] [Revised: 03/15/2021] [Accepted: 03/17/2021] [Indexed: 06/12/2023]
Abstract
Numerous studies have revealed the effect of temperature and hydraulic retention time (HRT) on microbiota in sludge biological hydrolysis (BH). However, few scholars have explored the combined effect of these two critical BH parameters. This study explored the BH performance and community structures over 12 combined temperatures-HRT conditions for temperatures from 35 °C to 55 °C and HRTs from 1.5 days to 6.0 days. Results showed that the 12 combined conditions formed only six distinct community structures with each of them relating to a distinctive range of volatile suspended solid reduction rates. The nonmetric multidimensional scaling and species-species association analysis on the DNA sequencing data revealed that the community structure was greatly driven by the microbial interactions (e.g., heterogeneous commensalism and competition) under the effect of temperature and HRT. This study established the linkages among the combined BH temperature-HRT conditions, microbial interaction, microbial community, and BH performance.
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Affiliation(s)
- Meiying Wang
- School of Engineering, University of Guelph, Ontario N1G 2W1, Canada.
| | - Huibin Chen
- School of Engineering, University of Guelph, Ontario N1G 2W1, Canada; College of Life Sciences, Fujian Normal University, Fuzhou 350117, China.
| | - Sheng Chang
- School of Engineering, University of Guelph, Ontario N1G 2W1, Canada.
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17
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Hashemi S, Hashemi SE, Lien KM, Lamb JJ. Molecular Microbial Community Analysis as an Analysis Tool for Optimal Biogas Production. Microorganisms 2021; 9:microorganisms9061162. [PMID: 34071282 PMCID: PMC8226781 DOI: 10.3390/microorganisms9061162] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Revised: 05/17/2021] [Accepted: 05/26/2021] [Indexed: 11/16/2022] Open
Abstract
The microbial diversity in anaerobic digestion (AD) is important because it affects process robustness. High-throughput sequencing offers high-resolution data regarding the microbial diversity and robustness of biological systems including AD; however, to understand the dynamics of microbial processes, knowing the microbial diversity is not adequate alone. Advanced meta-omic techniques have been established to determine the activity and interactions among organisms in biological processes like AD. Results of these methods can be used to identify biomarkers for AD states. This can aid a better understanding of system dynamics and be applied to producing comprehensive models for AD. The paper provides valuable knowledge regarding the possibility of integration of molecular methods in AD. Although meta-genomic methods are not suitable for on-line use due to long operating time and high costs, they provide extensive insight into the microbial phylogeny in AD. Meta-proteomics can also be explored in the demonstration projects for failure prediction. However, for these methods to be fully realised in AD, a biomarker database needs to be developed.
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Affiliation(s)
- Seyedbehnam Hashemi
- Department of Energy and Process Engineering & Enersense, Norwegian University of Science and Technology (NTNU), 7034 Trondheim, Norway; (S.H.); (S.E.H.); (K.M.L.)
| | - Sayed Ebrahim Hashemi
- Department of Energy and Process Engineering & Enersense, Norwegian University of Science and Technology (NTNU), 7034 Trondheim, Norway; (S.H.); (S.E.H.); (K.M.L.)
| | - Kristian M. Lien
- Department of Energy and Process Engineering & Enersense, Norwegian University of Science and Technology (NTNU), 7034 Trondheim, Norway; (S.H.); (S.E.H.); (K.M.L.)
| | - Jacob J. Lamb
- Department of Energy and Process Engineering & Enersense, Norwegian University of Science and Technology (NTNU), 7034 Trondheim, Norway; (S.H.); (S.E.H.); (K.M.L.)
- Department of Electronic Systems, Norwegian University of Science and Technology (NTNU), 7034 Trondheim, Norway
- Correspondence:
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18
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Jiang C, Peces M, Andersen MH, Kucheryavskiy S, Nierychlo M, Yashiro E, Andersen KS, Kirkegaard RH, Hao L, Høgh J, Hansen AA, Dueholm MS, Nielsen PH. Characterizing the growing microorganisms at species level in 46 anaerobic digesters at Danish wastewater treatment plants: A six-year survey on microbial community structure and key drivers. WATER RESEARCH 2021; 193:116871. [PMID: 33578056 DOI: 10.1016/j.watres.2021.116871] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 01/11/2021] [Accepted: 01/21/2021] [Indexed: 06/12/2023]
Abstract
Anaerobic digestion (AD) is a key technology at many wastewater treatment plants (WWTPs) for converting primary and surplus activated sludge to methane-rich biogas. However, the limited number of surveys and the lack of comprehensive datasets have hindered a deeper understanding of the characteristics and associations between key variables and the microbial community composition. Here, we present a six-year survey of 46 anaerobic digesters, located at 22 WWTPs in Denmark, which is the first and largest known study of the microbial ecology of AD at WWTPs at a regional scale. For three types of AD (mesophilic, mesophilic with thermal hydrolysis pretreatment, and thermophilic), we present the typical value range of 12 key parameters including operational variables and performance parameters. High-resolution bacterial and archaeal community analyses were carried out at species level using amplicon sequencing of >1,000 samples and the new ecosystem-specific MiDAS 3 reference database. We detected 42 phyla, 1,600 genera, and 3,584 species in the bacterial community, where 70% of the genera and 93% of the species represented environmental taxa that were only classified based on MiDAS 3 de novo placeholder taxonomy. More than 40% of the bacterial species were found not to grow in the mesophilic and thermophilic digesters and were only present due to immigration with the feed sludge. Ammonium concentration was the main driver shaping the bacterial community while temperature and pH were main drivers for the archaea in the three types of ADs. Sub-setting for the growing microbes improved significantly the correlation analyses and revealed the main drivers for the presence of specific species. Within mesophilic digesters, feed sludge composition and other key parameters (organic loading rate, biogas yield, and ammonium concentration) correlated with specific growing species. This survey provides a comprehensive insight into community structure at species level, providing a foundation for future studies of the ecological significance/characteristics and function of the many novel or poorly described taxa.
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Affiliation(s)
- Chenjing Jiang
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark; Key Laboratory of Engineering Oceanography, Second Institute of Oceanography, SOA, Hangzhou, China
| | - Miriam Peces
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Martin Hjorth Andersen
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Sergey Kucheryavskiy
- Section of Chemical Engineering, Department of Chemistry and Bioscience, Aalborg University, Esbjerg, Denmark
| | - Marta Nierychlo
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Erika Yashiro
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Kasper Skytte Andersen
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Rasmus Hansen Kirkegaard
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Liping Hao
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | | | | | - Morten Simonsen Dueholm
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
| | - Per Halkjær Nielsen
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark.
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19
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Jiang C, McIlroy SJ, Qi R, Petriglieri F, Yashiro E, Kondrotaite Z, Nielsen PH. Identification of microorganisms responsible for foam formation in mesophilic anaerobic digesters treating surplus activated sludge. WATER RESEARCH 2021; 191:116779. [PMID: 33401166 DOI: 10.1016/j.watres.2020.116779] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 12/06/2020] [Accepted: 12/20/2020] [Indexed: 06/12/2023]
Abstract
Foaming is a common operational problem in anaerobic digestion (AD) systems, where hydrophobic filamentous microorganisms are usually considered to be the major cause. However, little is known about the identity of foam-stabilising microorganisms in AD systems, and control measures are lacking. This study identified putative foam forming microorganisms in 13 full-scale mesophilic digesters located at 11 wastewater treatment plants in Denmark, using 16S rRNA gene amplicon sequencing with species-level resolution and fluorescence in situ hybridization (FISH) for visualization. A foaming potential aeration test was applied to classify the digester sludges according to their foaming propensity. A high foaming potential for sludges was linked to the abundance of species from the genus Candidatus Microthrix, immigrating with the feed stream (surplus activated sludge), but also to several novel phylotypes potentially growing in the digester. These species were classified to the genera Ca. Brevefilum (Ca. B. fermentans) and Tetrasphaera (midas_s_5), the families ST-12K33 (midas_s_22), and Rikenellaceae (midas_s_141), and the archaeal genus Methanospirillum (midas_s_2576). Application of FISH showed that these potential foam-forming organisms all had a filamentous morphology. Additionally, it was shown that concentrations of ammonium and total nitrogen correlated strongly to the presence of foam-formers. This study provided new insight into the identity of putative foam-forming microorganisms in mesophilic AD systems, allowing for the subsequent surveillance of their abundances and studies of their ecology. Such information will importantly inform the development of control measures for these problematic microorganisms.
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Affiliation(s)
- Chenjing Jiang
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark; Key Laboratory of Engineering Oceanography, Second Institute of Oceanography, SOA, Hangzhou, 310012, China
| | - Simon Jon McIlroy
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark; Centre for Microbiome Research, School of Biomedical Sciences, Queensland University of Technology (QUT), Translational Research Institute, Woolloongabba, Australia
| | - Rong Qi
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 10085, China
| | - Francesca Petriglieri
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark
| | - Erika Yashiro
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark
| | - Zivile Kondrotaite
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark
| | - Per Halkjær Nielsen
- Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, 9220 Aalborg, Denmark.
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20
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Chen Z, Li Y, Peng Y, Ye C, Zhang S. Effects of antibiotics on hydrolase activity and structure of microbial community during aerobic co-composting of food waste with sewage sludge. BIORESOURCE TECHNOLOGY 2021; 321:124506. [PMID: 33310386 DOI: 10.1016/j.biortech.2020.124506] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Revised: 12/01/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
This study aimed to investigate the effects of antibiotics on environmental factors, hydrolase activity, and microbial community during aerobic co-composting of food waste and sewage sludge. The results showed that 5 mg/kg of antibiotics decreased cellulase activity and increased lipase and proteinase activity, while 20 mg/kg of antibiotics also decreased cellulase activity and increased the contents of Zn, Cu, and Hg. The dominant bacterial genera of the four treatment groups were Enterococcus, Pseudomonas, Idiomarina, Lactobacillus, and Bacillus. The addition of antibiotics affected the succession of microbial community structure. Microbial communities treated with 5 mg/kg antibiotics had the highest in diversity, while those treated with 20 mg/kg antibiotics had the lowest in richness. Redundancy analysis (RDA) revealed that the pH and temperature were the most important environmental factors that affected microbial community succession, followed by total nitrogen and moisture content during co-composting of food waste and sewage sludge.
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Affiliation(s)
- Zhou Chen
- Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, People's Republic of China; University of Chinese Academy of Science, Beijing 100049, People's Republic of China
| | - Yanzeng Li
- Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, People's Republic of China; University of Chinese Academy of Science, Beijing 100049, People's Republic of China
| | - Yanyan Peng
- Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, People's Republic of China
| | - Chengsong Ye
- Xiamen University, Xiamen 361102, People's Republic of China
| | - Shenghua Zhang
- Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, People's Republic of China.
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21
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Kang HJ, Lee SH, Lim TG, Park JH, Kim B, Buffière P, Park HD. Recent advances in methanogenesis through direct interspecies electron transfer via conductive materials: A molecular microbiological perspective. BIORESOURCE TECHNOLOGY 2021; 322:124587. [PMID: 33358582 DOI: 10.1016/j.biortech.2020.124587] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/15/2020] [Accepted: 12/16/2020] [Indexed: 05/28/2023]
Abstract
Conductive materials can serve as biocatalysts during direct interspecies electron transfer for methanogenesis in anaerobic reactors. However, the mechanism promoting direct interspecies electron transfer in anaerobic reactors, particularly under environments in which diverse substrates and microorganisms coexist, remains to be elucidated from a scientific or an engineering point of view. Currently, many molecular microbiological approaches are employed to understand the fundamentals of this phenomenon. Here, the direct interspecies electron transfer mechanisms and relevant microorganisms identified to date using molecular microbiological methods were critically reviewed. Moreover, molecular microbiological methods for direct interspecies electron transfer used in previous studies and important findings thus revealed were analyzed. This review will help us better understand the phenomena of direct interspecies electron transfer using conductive materials and offer a framework for future molecular microbiological studies.
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Affiliation(s)
- Hyun-Jin Kang
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Sang-Hoon Lee
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Tae-Guen Lim
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Jeong-Hoon Park
- Sustainable Technology and Wellness R&D Group, Korea Institute of Industrial Technology (KITECH), Jeju-si, South Korea
| | - Boram Kim
- DEEP Laboratory, Université de Lyon, INSA Lyon, Lyon, France
| | - Pierre Buffière
- DEEP Laboratory, Université de Lyon, INSA Lyon, Lyon, France
| | - Hee-Deung Park
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea.
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22
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Park JH, Park JH, Lee SH, Jung SP, Kim SH. Enhancing anaerobic digestion for rural wastewater treatment with granular activated carbon (GAC) supplementation. BIORESOURCE TECHNOLOGY 2020; 315:123890. [PMID: 32731160 DOI: 10.1016/j.biortech.2020.123890] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 07/13/2020] [Accepted: 07/16/2020] [Indexed: 06/11/2023]
Abstract
Notwithstanding many efforts to increase the efficiency of anaerobic digestion at low-temperature (winter) conditions, a cost-effective and efficient method is lacking. This study proposes a low-cost method of low-temperature (<35 °C) anaerobic digestion of wastewater, involving supplementation with granular activated carbon (GAC). Supplementation with GAC was found to reduce the lag time by 29.8% (from 15.1 to 10.6 days) and increase the maximum methane production rate by 23.4% (from 6.4 to 7.9 mL/day) at 25 °C. Network analysis demonstrated a strong co-occurrence of Syntrophobacteriales and hydrogenotrophic methanogens (Methanobacteriaceae; WSA2; Methanoregulaceae). GAC supplementation can drastically reduce the time required for organic matter decomposition and methane production, thereby increase the efficiency of wastewater treatment.
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Affiliation(s)
- Jeong-Hoon Park
- Sustainable Technology and Wellness R&D Group, Korea Institute of Industrial Technology (KITECH), Jeju-si 63243, Republic of Korea
| | - Jong-Hun Park
- School of Civil and Environmental Engineering, Yonsei University, Seoul 03722, Republic of Korea
| | - Sang-Hoon Lee
- Department of Civil, Environmental and Architectural Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Sokhee P Jung
- Department of Environment and Energy Engineering, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Sang-Hyoun Kim
- School of Civil and Environmental Engineering, Yonsei University, Seoul 03722, Republic of Korea.
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23
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Microbial Communities and Sulfate-Reducing Microorganisms Abundance and Diversity in Municipal Anaerobic Sewage Sludge Digesters from a Wastewater Treatment Plant (Marrakech, Morocco). Processes (Basel) 2020. [DOI: 10.3390/pr8101284] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Both molecular analyses and culture-dependent isolation were combined to investigate the diversity of sulfate-reducing prokaryotes and explore their role in sulfides production in full-scale anaerobic digesters (Marrakech, Morocco). At global scale, using 16S rRNA gene sequencing, Proteobacteria, Bacteroidetes, Firmicutes, Actinobacteria, Synergistetes, and Euryarchaeota were the most dominant phyla. The abundance of Archaea (3.1–5.7%) was linked with temperature. The mcrA gene ranged from 2.18 × 105 to 1.47 × 107 gene copies.g−1 of sludge. The sulfate-reducing prokaryotes, representing 5% of total sequences, involved in sulfides production were Peptococcaceae, Syntrophaceae, Desulfobulbaceae, Desulfovibrionaceae, Syntrophobacteraceae, Desulfurellaceae, and Desulfobacteraceae. Furthermore, dsrB gene ranged from 2.18 × 105 to 1.92 × 107 gene copies.g−1 of sludge. The results revealed that exploration of diversity and function of sulfate-reducing bacteria may play a key role in decreasing sulfide production, an undesirable by-product, during anaerobic digestion.
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Voegel C, Durban N, Bertron A, Landon Y, Erable B. Evaluation of microbial proliferation on cementitious materials exposed to biogas systems. ENVIRONMENTAL TECHNOLOGY 2020; 41:2439-2449. [PMID: 30624151 DOI: 10.1080/09593330.2019.1567610] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Accepted: 12/19/2018] [Indexed: 06/09/2023]
Abstract
Understanding the interactions between biofilm and cementitious materials in biogas production systems is an essential step toward the development of durable concrete for this expanding sector. Although the action of the liquid phase medium on the material has been the subject of several research studies, the possible impact of the material's properties on biofilm formation and composition has been little investigated, if at all. The aim of this paper is to evaluate the characteristics of the biofilm according to the surface properties of the materials. Four cementitious materials with different chemical and mineralogical compositions, and various topological surface characteristics (pastes of CEM I, CEM III/C and CAC, and CEM I paste treated with oxalic acid) were exposed to the liquid phase of a fermenting biowaste for 10 weeks. The steps of biofilm formation were observed using SEM. Even though all the cementitious material surfaces were intensely colonized at the end of the experiments, the establishment of the biofilm seems to have been delayed on the oxalate-treated CEM I and on CAC coupons. Roughness and surface pH effects were not of prime importance for the biofilm development. The analysis of bacterial population diversity using 16S rDNA sequencing showed a less diversified microbial flora in the biofilm than in the reaction medium.
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Affiliation(s)
- Célestine Voegel
- LMDC, Université de Toulouse, UPS, Toulouse, France
- LGC, Université de Toulouse, CNRS, INPT, UPS, Toulouse, France
| | - Nadège Durban
- LMDC, Université de Toulouse, UPS, Toulouse, France
- LGC, Université de Toulouse, CNRS, INPT, UPS, Toulouse, France
| | | | - Yann Landon
- ICA, Université de Toulouse, UPS/INSA/Mines Albi/ISAE, Toulouse, France
| | - Benjamin Erable
- LGC, Université de Toulouse, CNRS, INPT, UPS, Toulouse, France
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Rettenmaier R, Schneider M, Munk B, Lebuhn M, Jünemann S, Sczyrba A, Maus I, Zverlov V, Liebl W. Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum. Microorganisms 2020; 8:E915. [PMID: 32560349 PMCID: PMC7355431 DOI: 10.3390/microorganisms8060915] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 06/06/2020] [Accepted: 06/11/2020] [Indexed: 01/02/2023] Open
Abstract
Bacterial hydrolysis of polysaccharides is an important step for the production of sustainable energy, for example during the conversion of plant biomass to methane-rich biogas. Previously, Hungateiclostridium thermocellum was identified as cellulolytic key player in thermophilic biogas microbiomes with a great frequency as an accompanying organism. The aim of this study was to physiologically characterize a recently isolated co-culture of H. thermocellum and the saccharolytic bacterium Defluviitalea raffinosedens from a laboratory-scale biogas fermenter. The characterization focused on cellulose breakdown by applying the measurement of cellulose hydrolysis, production of metabolites, and the activity of secreted enzymes. Substrate degradation and the production of volatile metabolites was considerably enhanced when both organisms acted synergistically. The metabolic properties of H. thermocellum have been studied well in the past. To predict the role of D. raffinosedens in this bacterial duet, the genome of D. raffinosedens was sequenced for the first time. Concomitantly, to deduce the prevalence of D. raffinosedens in anaerobic digestion, taxonomic composition and transcriptional activity of different biogas microbiomes were analyzed in detail. Defluviitalea was abundant and metabolically active in reactor operating at highly efficient process conditions, supporting the importance of this organism for the hydrolysis of the raw substrate.
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Affiliation(s)
- Regina Rettenmaier
- Chair of Microbiology, Technical University of Munich, Emil-Ramann-Str. 4, 85354 Freising, Germany; (R.R.); (M.S.); (W.L.)
| | - Martina Schneider
- Chair of Microbiology, Technical University of Munich, Emil-Ramann-Str. 4, 85354 Freising, Germany; (R.R.); (M.S.); (W.L.)
| | - Bernhard Munk
- Department for Quality Assurance and Analytics, Bavarian State Research Center for Agriculture, Lange Point 6, 85354 Freising, Germany; (B.M.); (M.L.)
| | - Michael Lebuhn
- Department for Quality Assurance and Analytics, Bavarian State Research Center for Agriculture, Lange Point 6, 85354 Freising, Germany; (B.M.); (M.L.)
| | - Sebastian Jünemann
- Center for Biotechnology (CeBiTec), Universitätsstr. 27, 33615 Bielefeld, Germany;
- Faculty of Technology, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany;
| | - Alexander Sczyrba
- Faculty of Technology, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany;
| | - Irena Maus
- Center for Biotechnology (CeBiTec), Universitätsstr. 27, 33615 Bielefeld, Germany;
| | - Vladimir Zverlov
- Chair of Microbiology, Technical University of Munich, Emil-Ramann-Str. 4, 85354 Freising, Germany; (R.R.); (M.S.); (W.L.)
- Institute of Molecular Genetics, RAS, Kurchatov Sq. 2, 123182 Moscow, Russia
| | - Wolfgang Liebl
- Chair of Microbiology, Technical University of Munich, Emil-Ramann-Str. 4, 85354 Freising, Germany; (R.R.); (M.S.); (W.L.)
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Wang H, Lim TT, Duong C, Zhang W, Xu C, Yan L, Mei Z, Wang W. Long-Term Mesophilic Anaerobic Co-Digestion of Swine Manure with Corn Stover and Microbial Community Analysis. Microorganisms 2020; 8:microorganisms8020188. [PMID: 32013160 PMCID: PMC7074675 DOI: 10.3390/microorganisms8020188] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 01/28/2020] [Accepted: 01/28/2020] [Indexed: 01/12/2023] Open
Abstract
Long-term anaerobic co-digestion of swine manure (SM) and corn stover (CS) was conducted using semi-continuously loaded digesters under mesophilic conditions. A preliminary test was first conducted to test the effects of loading rates, and results indicated the 3 g-VS L−1 d−1 was the optimal loading rate. Based on the preliminary results, a verification replicated test was conducted with 3 g-VS L−1 d−1 loading rate and different SM/CS ratios (1:1, 2:1 and 1:2). Results showed that a SM/CS ratio of 2/1 was optimal, based on maximum observed methane-VSdes generation and carbon conversion efficiency (72.56 ± 3.40 mL g−1 and 40.59%, respectively). Amplicon sequencing analysis suggested that microbial diversity was increased with CS loading. Amino-acid-degrading bacteria were abundant in the treatment groups. Archaea Methanoculleus could enhance biogas and methane productions.
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Affiliation(s)
- Haipeng Wang
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Agro-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (H.W.); (W.Z.); (C.X.); (L.Y.)
| | - Teng Teeh Lim
- Agriculture Systems Management, Division of Food Systems and Bioengineering, University of Missouri, Columbia, MO 65211-5200, USA; (T.T.L.); (C.D.)
| | - Cuong Duong
- Agriculture Systems Management, Division of Food Systems and Bioengineering, University of Missouri, Columbia, MO 65211-5200, USA; (T.T.L.); (C.D.)
| | - Wei Zhang
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Agro-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (H.W.); (W.Z.); (C.X.); (L.Y.)
| | - Congfeng Xu
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Agro-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (H.W.); (W.Z.); (C.X.); (L.Y.)
| | - Lei Yan
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Agro-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (H.W.); (W.Z.); (C.X.); (L.Y.)
| | - Zili Mei
- Key Laboratory of Development and Application of Rural Renewable Energy, Ministry of Agriculture and Rural Affairs, Chengdu 610041, China;
| | - Weidong Wang
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Agro-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (H.W.); (W.Z.); (C.X.); (L.Y.)
- Correspondence: ; Tel.: +86-13836729365
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Kondaveeti S, Lee SH, Park HD, Min B. Specific enrichment of different Geobacter sp. in anode biofilm by varying interspatial distance of electrodes in air-cathode microbial fuel cell (MFC). Electrochim Acta 2020. [DOI: 10.1016/j.electacta.2019.135388] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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28
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Kang HJ, Lee SH, Lim TG, Park HD. Effect of inoculum concentration on methanogenesis by direct interspecies electron transfer: Performance and microbial community composition. BIORESOURCE TECHNOLOGY 2019; 291:121881. [PMID: 31394488 DOI: 10.1016/j.biortech.2019.121881] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Revised: 07/20/2019] [Accepted: 07/22/2019] [Indexed: 06/10/2023]
Abstract
To understand the effect of inoculum concentration on direct interspecies electron transfer (DIET) for methanogenesis, batch-type anaerobic bioreactors with different inoculum concentrations were operated with and without supplemented granular activated carbon (GAC). With decrease in inoculum concentration, GAC-supplemented bioreactors showed faster methane production rates and reduced lag times. Geobacter species were specifically enriched on the GAC surfaces under lower inoculum concentration conditions. Together, the relative abundance of aceticlastic methanogens (competitors of Geobacter species for acetate) gradually decreased when the inoculum concentration increased. These results suggested that the specific enrichment of Geobacter species by outcompeting with aceticlastic methanogens through low inoculum concentrations on GAC surfaces accelerated methanogenesis by DIET via GAC in anaerobic bioreactors. Taken together, the results of this study suggested that inoculum concentration is an important factor in stimulating DIET for methane production.
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Affiliation(s)
- Hyun-Jin Kang
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Sang-Hoon Lee
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Tae-Guen Lim
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Hee-Deung Park
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea.
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29
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Zhang M, Ma Y, Ji D, Li X, Zhang J, Zang L. Synergetic promotion of direct interspecies electron transfer for syntrophic metabolism of propionate and butyrate with graphite felt in anaerobic digestion. BIORESOURCE TECHNOLOGY 2019; 287:121373. [PMID: 31078810 DOI: 10.1016/j.biortech.2019.121373] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2019] [Revised: 04/19/2019] [Accepted: 04/20/2019] [Indexed: 05/28/2023]
Abstract
Direct interspecies electron transfer (DIET) was considered to replace interspecies H2 transfer to enhance syntrophic metabolism during the anaerobic digestion. The graphite felt with excellent electrical conductivity was added into a semi-continuous reactor as a conductive material, strengthening DIET in enhancing the degradation of propionate and butyrate. The final average CH4 production rate increased by 19.1% and 16.7%, respectively, during the propionate and butyrate degradation. Microbial community analysis revealed that the relative abundance of the microflora that could participate in DIET, like Geobacter, Methanosaeta and Methanosarcina species, was greatly improved in the presence of graphite felt. Further experiments showed that the high H2 partial pressure had no obvious effect on the degradation of propionate and butyrate in the graphite felt-supplement reactors.
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Affiliation(s)
- Mingyuan Zhang
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China
| | - Yunqian Ma
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China
| | - Dandan Ji
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China
| | - Xueyuan Li
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China
| | - Jishi Zhang
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China
| | - Lihua Zang
- College of Environmental Science and Engineering, Qilu University of Technology (Shandong Academy of Science), Jinan 250353, China.
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30
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Acidogenic properties of carbohydrate-rich wasted potato and microbial community analysis: Effect of pH. J Biosci Bioeng 2019; 128:50-55. [DOI: 10.1016/j.jbiosc.2018.12.009] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 11/05/2018] [Accepted: 12/18/2018] [Indexed: 11/30/2022]
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31
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Spatial Variations of Bacterial Communities of an Anaerobic Lagoon-Type Biodigester Fed with Dairy Manure. Processes (Basel) 2019. [DOI: 10.3390/pr7070408] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Anaerobic digestion technology is being widely employed for sustainable management of organic wastes generated in animal farms, industries, etc. Nevertheless, biodigester microbiome is still considered a “black box” because it is regulated by different physico-chemical and operational factors. In this study, the bacterial diversity and composition in different sites of a full-scale lagoon type biodigester (23,000 m3) fed with dairy manure, viz., the influent, beginning, middle, final and effluent were analyzed. The biodigester registered a total of 1445 OTUs, which demonstrated the complex microbial ecosystem in it. Of them, only six OTUs were shared among all the different sampling points. The most abundant phyla belonged to Firmicutes, Proteobacteria, Latescibacteria and Thermotogae. The Simpson and Shannon index showed that the highest microbial diversity was observed in the beginning point of the biodigester, meanwhile, the lowest diversity was recorded in the middle. Based on the UniFrac distances, microbial communities with high similarity were recorded in the middle and final of the biodigester. It can be clearly observed that bacterial communities varied at the different points of the biodigester. However, based on metagenome predictions using PICRUSt, it was found that independent of the differences in taxonomy and location, bacterial communities maintained similar metabolic functions.
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32
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Fujimoto M, Carey DE, Zitomer DH, McNamara PJ. Syntroph diversity and abundance in anaerobic digestion revealed through a comparative core microbiome approach. Appl Microbiol Biotechnol 2019; 103:6353-6367. [PMID: 31161391 DOI: 10.1007/s00253-019-09862-4] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Revised: 04/04/2019] [Accepted: 04/22/2019] [Indexed: 11/27/2022]
Abstract
Anaerobic digestion is an important biotechnology treatment process for conversion of waste to energy. In this study, a comparative core microbiome approach, i.e., determining taxa that are shared in functioning digesters but not shared in non-functioning digesters, was used to determine microbial taxa that could play key roles for effective anaerobic digestion. Anaerobic digester functions were impaired by adding the broad-spectrum antimicrobial triclosan (TCS) or triclocarban (TCC) at different concentrations, and the core microbiomes in both functioning and non-functioning anaerobic digesters were compared. Digesters treated with high (2500 mg/kg) or medium (450 mg/kg) TCS and high (850 mg/kg) TCC concentrations lost their function, i.e., methane production decreased, effluent volatile fatty acid concentrations increased, and pH decreased. Changes in microbial community diversity and compositions were assessed using 16S rRNA gene amplicon sequencing. Microbial richness decreased significantly in non-functioning digesters (p < 0.001). Microbial community compositions in non-functioning digesters significantly differed from those in functioning digesters (p = 0.001, ANOSIM). Microbes identified as potentially key taxa included previously known fatty acid-degrading syntrophs and amino acid-degrading syntrophs. A diverse group of syntrophs detected in this study had low relative abundance in functioning digesters, suggesting the importance of rare microbes in anaerobic digester operation. The comparative microbiome approach used in this study can be applied to other microbial systems where a community-driven biological phenomena can be observed directly.
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Affiliation(s)
- Masanori Fujimoto
- Water Quality Center, Department of Civil, Construction and Environmental Engineering, Marquette University, Milwaukee, WI, USA.,Soil and Water Sciences Department, Department of Microbiology and Cell Science, University of Florida, Gainesville, FL, USA
| | - Daniel E Carey
- Water Quality Center, Department of Civil, Construction and Environmental Engineering, Marquette University, Milwaukee, WI, USA.,Advisian, Charlotte, NC, USA
| | - Daniel H Zitomer
- Water Quality Center, Department of Civil, Construction and Environmental Engineering, Marquette University, Milwaukee, WI, USA
| | - Patrick J McNamara
- Water Quality Center, Department of Civil, Construction and Environmental Engineering, Marquette University, Milwaukee, WI, USA.
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Ferguson RMW, Coulon F, Villa R. Understanding microbial ecology can help improve biogas production in AD. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 642:754-763. [PMID: 29920462 DOI: 10.1016/j.scitotenv.2018.06.007] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Revised: 06/01/2018] [Accepted: 06/01/2018] [Indexed: 06/08/2023]
Abstract
454-Pyrosequencing and lipid fingerprinting were used to link anaerobic digestion (AD) process parameters (pH, alkalinity, volatile fatty acids (VFAs), biogas production and methane content) with the reactor microbial community structure and composition. AD microbial communities underwent stress conditions after changes in organic loading rate and digestion substrates. 454-Pyrosequencing analysis showed that, irrespectively of the substrate digested, methane content and pH were always significantly, and positively, correlated with community evenness. In AD, microbial communities with more even distributions of diversity are able to use parallel metabolic pathways and have greater functional stability; hence, they are capable of adapting and responding to disturbances. In all reactors, a decrease in methane content to <30% was always correlated with a 50% increase of Firmicutes sequences (particularly in operational taxonomic units (OTUs) related to Ruminococcaceae and Veillonellaceae). Whereas digesters producing higher methane content (above 60%), contained a high number of sequences related to Synergistetes and unidentified bacterial OTUs. Finally, lipid fingerprinting demonstrated that, under stress, the decrease in archaeal biomass was higher than the bacterial one, and that archaeal Phospholipid etherlipids (PLEL) levels were correlated to reactor performances. These results demonstrate that, across a number of parameters such as lipids, alpha and beta diversity, and OTUs, knowledge of the microbial community structure can be used to predict, monitor, or optimise AD performance.
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Affiliation(s)
- Robert M W Ferguson
- School of Biological Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK
| | - Frédéric Coulon
- School of Water, Energy and Environment, Cranfield University, Cranfield, MK43 0AL, UK
| | - Raffaella Villa
- School of Water, Energy and Environment, Cranfield University, Cranfield, MK43 0AL, UK.
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Manzoor N, Cao L, Deng D, Liu Z, Jiang Y, Liu Y. Cellulase extraction from cellulolytic bacteria promoting bioelectricity production by degrading cellulose. J Electroanal Chem (Lausanne) 2018. [DOI: 10.1016/j.jelechem.2018.09.041] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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35
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Zhang K, Gu J, Wang X, Yin Y, Zhang X, Zhang R, Tuo X, Zhang L. Variations in the denitrifying microbial community and functional genes during mesophilic and thermophilic anaerobic digestion of cattle manure. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 634:501-508. [PMID: 29631139 DOI: 10.1016/j.scitotenv.2018.03.377] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Revised: 03/27/2018] [Accepted: 03/30/2018] [Indexed: 06/08/2023]
Abstract
In this study, the anaerobic digestion (AD) of cattle manure was conducted at two temperatures (mesophilic: 35 °C; thermophilic: 55 °C) to analyze the dynamics of the denitrifying functional microbial community and functional genes. The cumulative N2O production under thermophilic conditions was 130.3% higher than that under mesophilic conditions. Thermophilic AD decreased the abundance of nosZ, which was more functional than other denitrifying genes. Firmicutes, Proteobacteria, and Bacteroidetes were the main phyla, and they were also related to denitrification during AD. Redundancy analysis indicated that pH, temperature, and NH4+-N mainly affected the functional bacterial community. Temperature altered the co-occurrence patterns of the bacterial community and the keystone genera in AD. Desulfovibrio in mesophilic AD and Thiobacillus in thermophilic AD were closely related to nitrogen transformation among the keystone genera. The variations in the abundances of members of the denitrifying microbial community and functional genes during AD suggest that thermophilic AD may have caused greater nitrogen losses.
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Affiliation(s)
- Kaiyu Zhang
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Jie Gu
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China; Research Center of Recycle Agricultural Engineering and Technology of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi 712100, China.
| | - Xiaojuan Wang
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China; Research Center of Recycle Agricultural Engineering and Technology of Shaanxi Province, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yanan Yin
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xin Zhang
- College of Science, Northwest A&F University, Yangling 712100, China
| | - Ranran Zhang
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiaxia Tuo
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Li Zhang
- College of Resources and Environmental Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
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Park JH, Kang HJ, Park KH, Park HD. Direct interspecies electron transfer via conductive materials: A perspective for anaerobic digestion applications. BIORESOURCE TECHNOLOGY 2018; 254:300-311. [PMID: 29398288 DOI: 10.1016/j.biortech.2018.01.095] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2017] [Revised: 01/17/2018] [Accepted: 01/19/2018] [Indexed: 05/28/2023]
Abstract
Anaerobic digestion (AD) is a microbial process that produces renewable energy in the form of methane by treating organic waste and high-strength wastewater. Recent studies have demonstrated that conductive materials can promote direct interspecies electron transfer (DIET) between exoelectrogenic bacteria and methanogenic archaea. DIET via conductive materials is more effective for methane production than interspecies electron transfer using electron carriers such as hydrogen, a principal route of methane production in conventional AD. This critical review presents the current understanding of DIET via conductive materials for methane production, summarizes the relevant studies published to date, and analyzes these studies with regard to conductive materials, substrates, inocula, performance, and microorganisms. Based on this analysis, possible future directions are suggested for practical DIET applications via conductive materials in AD.
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Affiliation(s)
- Jeong-Hoon Park
- School of Civil, Environmental and Architectural Engineering, Korea University, South Korea
| | - Hyun-Jin Kang
- School of Civil, Environmental and Architectural Engineering, Korea University, South Korea
| | - Kang-Hee Park
- School of Civil, Environmental and Architectural Engineering, Korea University, South Korea
| | - Hee-Deung Park
- School of Civil, Environmental and Architectural Engineering, Korea University, South Korea; KU-KIST Green School, Graduate School of Energy and Environment, Korea University, Seoul, South Korea.
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Calusinska M, Goux X, Fossépré M, Muller EEL, Wilmes P, Delfosse P. A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems. BIOTECHNOLOGY FOR BIOFUELS 2018; 11:196. [PMID: 30038663 PMCID: PMC6052691 DOI: 10.1186/s13068-018-1195-8] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Accepted: 07/06/2018] [Indexed: 05/04/2023]
Abstract
BACKGROUND Anaerobic digestion (AD) is a microbe-driven process of biomass decomposition to CH4 and CO2. In addition to renewable and cost-effective energy production, AD has emerged in the European Union as an environmentally friendly model of bio-waste valorisation and nutrient recycling. Nevertheless, due to the high diversity of uncharacterised microbes, a typical AD microbiome is still considered as "dark matter". RESULTS Using the high-throughput sequencing of small rRNA gene, and a monthly monitoring of the physicochemical parameters for 20 different mesophilic full-scale bioreactors over 1 year, we generated a detailed view of AD microbial ecology towards a better understanding of factors that influence and shape these communities. By studying the broadly distributed OTUs present in over 80% of analysed samples, we identified putatively important core bacteria and archaea to the AD process that accounted for over 70% of the whole microbial community relative abundances. AD reactors localised at the wastewater treatment plants were shown to operate with distinct core microbiomes than the agricultural and bio-waste treating biogas units. We also showed that both the core microbiomes were composed of low (with average community abundance ≤ 1%) and highly abundant microbial populations; the vast majority of which remains yet uncharacterised, e.g. abundant candidate Cloacimonetes. Using non-metric multidimensional scaling, we observed microorganisms grouping into clusters that well reflected the origin of the samples, e.g. wastewater versus agricultural and bio-waste treating biogas units. The calculated diversity patterns differed markedly between the different community clusters, mainly due to the presence of highly diverse and dynamic transient species. Core microbial communities appeared relatively stable over the monitoring period. CONCLUSIONS In this study, we characterised microbial communities in different AD systems that were monitored over a 1-year period. Evidences were shown to support the concept of a core community driving the AD process, whereas the vast majority of dominant microorganisms remain yet to be characterised.
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Affiliation(s)
- Magdalena Calusinska
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, 41 rue du Brill, 4422 Belvaux, Luxembourg
| | - Xavier Goux
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, 41 rue du Brill, 4422 Belvaux, Luxembourg
| | - Marie Fossépré
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, 41 rue du Brill, 4422 Belvaux, Luxembourg
| | - Emilie E. L. Muller
- Eco-Systems Biology Group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7 avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, Luxembourg
- Department of Microbiology, Genomics and the Environment, Université de Strasbourg, CNRS, GMGM, UMR 7156, Strasbourg, France
| | - Paul Wilmes
- Eco-Systems Biology Group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7 avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, Luxembourg
| | - Philippe Delfosse
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, 41 rue du Brill, 4422 Belvaux, Luxembourg
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Zhang B, Xu X, Zhu L. Structure and function of the microbial consortia of activated sludge in typical municipal wastewater treatment plants in winter. Sci Rep 2017; 7:17930. [PMID: 29263391 PMCID: PMC5738398 DOI: 10.1038/s41598-017-17743-x] [Citation(s) in RCA: 89] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Accepted: 11/29/2017] [Indexed: 12/01/2022] Open
Abstract
To better understand the relationship between the environmental variables and microbial communities of activated sludge, we took winter samples from different biological treatment units (anaerobic, oxic, etc) from the WWTP's of a number of Chinese cities. Differences in influent organic components and activated sludge microbial communities were identified by gas chromatography-mass spectrometry and high-throughput sequencing technology, respectively. Liquid nitrogen grinding pretreatment of samples was found to aid in the obtaining of a more bio-diversified sample. Influent type and dissolved oxygen concentration influenced the activated sludge microbial community structure. Nitrospira, Caldilineaceae and Anaerolineaceae were highly related to domestic wastewater treatment systems, whereas Thauera was the most abundant putative refractory aromatic hydrocarbon decomposer found in industrial wastewater treatment systems. Within the influent composition, we speculate that Thauera, Macellibacteroides and Desulfomicrobium are the key functional genera of the anaerobic environment of the textile dyeing industry wastewater treatment systems, whilst Thauera and Thiobacillus are key functional microbes in fine chemical wastewater treatment systems.
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Affiliation(s)
- Bo Zhang
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, P.R. China
| | - Xiangyang Xu
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, P.R. China
- Zhejiang Province Key Laboratory for Water Pollution Control and Environmental Safety, Hangzhou, 310058, P.R. China
| | - Liang Zhu
- Department of Environmental Engineering, Zhejiang University, Hangzhou, 310058, P.R. China.
- Zhejiang Province Key Laboratory for Water Pollution Control and Environmental Safety, Hangzhou, 310058, P.R. China.
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Zhao Z, Song X, Zhang Y, Zhao Y, Wang B, Wang Y. Effects of iron and calcium carbonate on contaminant removal efficiencies and microbial communities in integrated wastewater treatment systems. CHEMOSPHERE 2017; 189:10-20. [PMID: 28922630 DOI: 10.1016/j.chemosphere.2017.09.020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2017] [Revised: 07/25/2017] [Accepted: 09/05/2017] [Indexed: 06/07/2023]
Abstract
In the paper, we explored the influences of different dosages of iron and calcium carbonate on contaminant removal efficiencies and microbial communities in algal ponds combined with constructed wetlands. After 1-year operation of treatment systems, based on the high-throughput pyrosequencing analysis of microbial communities, the optimal operating conditions were obtained as follows: the ACW10 system with Fe3+ (5.6 mg L-1), iron powder (2.8 mg L-1), and CaCO3 powder (0.2 mg L-1) in influent as the adjusting agents, initial phosphorus source (PO43-) in influent, the ratio of nitrogen to phosphorus (N/P) of 30 in influent, and hydraulic retention time (HRT) of 1 day. Total nitrogen (TN) removal efficiency and total phosphorus (TP) removal efficiency were improved significantly. The hydrolysis of CaCO3 promoted the physicochemical precipitation in contaminant removal. Meanwhile, Fe3+ and iron powder produced Fe2+, which improved contaminant removal. Iron ion improved the diversity, distribution, and metabolic functions of microbial communities in integrated treatment systems. In the treatment ACW10, the dominant phylum in the microbial community was PLANCTOMYCETES, which positively promoted nitrogen removal. After 5 consecutive treatments in ACW10, contaminant removal efficiencies for TN and TP respectively reached 80.6% and 57.3% and total iron concentration in effluent was 0.042 mg L-1.
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Affiliation(s)
- Zhimiao Zhao
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China; Engineering Research Center for Water Environment Ecology in Shanghai, Shanghai, 201306, China
| | - Xinshan Song
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai, 201620, China.
| | - Yinjiang Zhang
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China; Engineering Research Center for Water Environment Ecology in Shanghai, Shanghai, 201306, China
| | - Yufeng Zhao
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai, 201620, China
| | - Bodi Wang
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai, 201620, China
| | - Yuhui Wang
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai, 201620, China
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Mei R, Nobu MK, Narihiro T, Kuroda K, Muñoz Sierra J, Wu Z, Ye L, Lee PKH, Lee PH, van Lier JB, McInerney MJ, Kamagata Y, Liu WT. Operation-driven heterogeneity and overlooked feed-associated populations in global anaerobic digester microbiome. WATER RESEARCH 2017; 124:77-84. [PMID: 28750287 DOI: 10.1016/j.watres.2017.07.050] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2017] [Revised: 07/18/2017] [Accepted: 07/19/2017] [Indexed: 05/11/2023]
Abstract
Anaerobic digester (AD) microbiomes harbor complex, interacting microbial populations to achieve biomass reduction and biogas production, however how they are influenced by operating conditions and feed sludge microorganisms remain unclear. These were addressed by analyzing the microbial communities of 90 full-scale digesters at 51 municipal wastewater treatment plants from five countries. Heterogeneity detected in community structures suggested that no single AD microbiome could be defined. Instead, the AD microbiomes were classified into eight clusters driven by operating conditions (e.g., pretreatment, temperature range, and salinity), whereas geographic location of the digesters did not have significant impacts. Comparing digesters populations with those present in the corresponding feed sludge led to the identification of a hitherto overlooked feed-associated microbial group (i.e., the residue populations). They accounted for up to 21.4% of total sequences in ADs operated at low temperature, presumably due to ineffective digestion, and as low as 0.8% in ADs with pretreatment. Within each cluster, a core microbiome was defined, including methanogens, syntrophic metabolizers, fermenters, and the newly described residue populations. Our work provides insights into the key factors shaping full-scale AD microbiomes in a global scale, and draws attentions to the overlooked residue populations.
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Affiliation(s)
- Ran Mei
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Masaru K Nobu
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA; Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan
| | - Takashi Narihiro
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan
| | - Kyohei Kuroda
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA; Department of Environmental Systems Engineering, Nagaoka University of Technology, Kami-tomioka, Niigata, Japan
| | - Julian Muñoz Sierra
- Section Sanitary Engineering, Department of Water Management, Delft University of Technology, Delft, The Netherlands
| | - Zhuoying Wu
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Lin Ye
- School of the Environment, Nanjing University, Nanjing, Jiangsu, China
| | - Patrick K H Lee
- School of Energy and Environment, City University of Hong Kong, Kowloon, Hong Kong
| | - Po-Heng Lee
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong
| | - Jules B van Lier
- Section Sanitary Engineering, Department of Water Management, Delft University of Technology, Delft, The Netherlands
| | - Michael J McInerney
- Department of Botany and Microbiology, University of Oklahoma, Norman, OK, USA
| | - Yoichi Kamagata
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan
| | - Wen-Tso Liu
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
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41
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Lee JY, Park JH, Park HD. Effects of an applied voltage on direct interspecies electron transfer via conductive materials for methane production. WASTE MANAGEMENT (NEW YORK, N.Y.) 2017; 68:165-172. [PMID: 28743578 DOI: 10.1016/j.wasman.2017.07.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Revised: 07/13/2017] [Accepted: 07/16/2017] [Indexed: 06/07/2023]
Abstract
Direct interspecies electron transfer (DIET) between exoelectrogenic bacteria and methanogenic archaea via conductive materials is reported as an efficient method to produce methane in anaerobic organic waste digestion. A voltage can be applied to the conductive materials to accelerate the DIET between two groups of microorganisms to produce methane. To evaluate this hypothesis, two sets of anaerobic serum bottles with and without applied voltage were used with a pair of graphite rods as conductive materials to facilitate DIET. Initially, the methane production rate was similar between the two sets of serum bottles, and later the serum bottles with an applied voltage of 0.39V showed a 168% higher methane production rate than serum bottles without an applied voltage. In cyclic voltammograms, the characteristic redox peaks for hydrogen and acetate oxidation were identified in the serum bottles with an applied voltage. In the microbial community analyses, hydrogenotrophic methanogens (e.g. Methanobacterium) were observed to be abundant in serum bottles with an applied voltage, while methanogens utilizing carbon dioxide (e.g., Methanosaeta and Methanosarcina) were dominant in serum bottles without an applied voltage. Taken together, the applied voltage on conductive materials might not be effective to promote DIET in methane production. Instead, it appeared to generate a condition for hydrogenotrophic methanogenesis.
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Affiliation(s)
- Jung-Yeol Lee
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Jeong-Hoon Park
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea
| | - Hee-Deung Park
- School of Civil, Environmental and Architectural Engineering, Korea University, Seoul, South Korea; KU-KIST Green School, Graduate School of Energy and Environment, Korea University, Seoul, South Korea.
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42
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Conversion of vegetable wastes to organic acids in leaching bed reactor: Performance and bacterial community analysis. J Biosci Bioeng 2017; 124:195-203. [DOI: 10.1016/j.jbiosc.2017.02.020] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2016] [Revised: 02/24/2017] [Accepted: 02/24/2017] [Indexed: 11/18/2022]
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43
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Zhu X, Treu L, Kougias PG, Campanaro S, Angelidaki I. Characterization of the planktonic microbiome in upflow anaerobic sludge blanket reactors during adaptation of mesophilic methanogenic granules to thermophilic operational conditions. Anaerobe 2017; 46:69-77. [PMID: 28057558 DOI: 10.1016/j.anaerobe.2016.12.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Revised: 12/22/2016] [Accepted: 12/30/2016] [Indexed: 10/20/2022]
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44
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Effect of Seasonal Temperature on the Performance and on the Microbial Community of a Novel AWFR for Decentralized Domestic Wastewater Pretreatment. APPLIED SCIENCES-BASEL 2017. [DOI: 10.3390/app7060605] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Due to environmental burden and human health risks in developing countries, the treatment of decentralized domestic wastewater has been a matter of great concern in recent years. A novel pilot-scale three-stage anaerobic wool-felt filter reactor (AWFR) was designed to treat real decentralized domestic wastewater at seasonal temperature variations of 8 to 35 °C for 364 days. The results showed that the average chemical oxygen demand (COD) removal efficiencies of AWFR in summer and winter were 76 ± 7.2% and 52 ± 5.9% at one day and three days Hydraulic Retention Time (HRT), respectively. COD mass balance analysis demonstrated that even though COD removal was lower in winter, approximately 43.5% of influent COD was still converted to methane. High-throughput MiSeq sequencing analyses indicated that Methanosaeta, Methanobacterium, and Methanolinea were the predominant methanogens, whereas the genus Bacillus probably played important roles in fermentation processes throughout the whole operation period. The performance and microbial community composition study suggested the application potential of the AWFR system for the pretreatment of decentralized domestic wastewater.
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45
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Kim HY, Seo J, Kim TH, Shim B, Cha SM, Yu S. Pyrosequencing-based assessment of microbial community shifts in leachate from animal carcass burial lysimeter. THE SCIENCE OF THE TOTAL ENVIRONMENT 2017; 587-588:232-239. [PMID: 28249748 DOI: 10.1016/j.scitotenv.2017.02.126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2016] [Revised: 02/15/2017] [Accepted: 02/15/2017] [Indexed: 06/06/2023]
Abstract
This study examined the use of microbial community structure as a bio-indicator of decomposition levels. High-throughput pyrosequencing technology was used to assess the shift in microbial community of leachate from animal carcass lysimeter. The leachate samples were collected monthly for one year and a total of 164,639 pyrosequencing reads were obtained and used in the taxonomic classification and operational taxonomy units (OTUs) distribution analysis based on sequence similarity. Our results show considerable changes in the phylum-level bacterial composition, suggesting that the microbial community is a sensitive parameter affected by the burial environment. The phylum classification results showed that Proteobacteria (Pseudomonas) were the most influential taxa in earlier decomposition stage whereas Firmicutes (Clostridium, Sporanaerobacter, and Peptostreptococcus) were dominant in later stage under anaerobic conditions. The result of this study can provide useful information on a time series of leachate profiles of microbial community structures and suggest patterns of microbial diversity in livestock burial sites. In addition, this result can be applicable to predict the decomposition stages under clay loam based soil conditions of animal livestock.
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Affiliation(s)
- Hyun Young Kim
- Radiation Research Division for Industry and Environment, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-Si, Jeollabuk-Do 56212, Republic of Korea
| | - Jiyoung Seo
- Reliability Test Center, Defense Agency for Technology and Quality, Seoul 02455, Republic of Korea
| | - Tae-Hun Kim
- Radiation Research Division for Industry and Environment, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-Si, Jeollabuk-Do 56212, Republic of Korea
| | - Bomi Shim
- Radiation Research Division for Industry and Environment, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-Si, Jeollabuk-Do 56212, Republic of Korea
| | - Seok Mun Cha
- Radiation Research Division for Industry and Environment, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-Si, Jeollabuk-Do 56212, Republic of Korea
| | - Seungho Yu
- Radiation Research Division for Industry and Environment, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-Si, Jeollabuk-Do 56212, Republic of Korea.
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46
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Characteristics of Pollutants and Microbial Communities Obtained in Simulated Lysimeters of Swine Carcasses. SUSTAINABILITY 2017. [DOI: 10.3390/su9030471] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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47
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Kumar G, Park JH, Sivagurunathan P, Lee SH, Park HD, Kim SH. Microbial responses to various process disturbances in a continuous hydrogen reactor fed with galactose. J Biosci Bioeng 2017; 123:216-222. [DOI: 10.1016/j.jbiosc.2016.08.006] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Revised: 06/08/2016] [Accepted: 08/17/2016] [Indexed: 10/21/2022]
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48
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Zhimiao Z, Xinshan S, Yufeng Z, Yanping X, Yuhui W, Junfeng W, Denghua Y. Effects of iron and calcium carbonate on the variation and cycling of carbon source in integrated wastewater treatments. BIORESOURCE TECHNOLOGY 2017; 225:262-271. [PMID: 27898316 DOI: 10.1016/j.biortech.2016.11.074] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2016] [Revised: 11/13/2016] [Accepted: 11/19/2016] [Indexed: 06/06/2023]
Abstract
Iron and calcium carbonate were added in wastewater treatments as the adjusting agents to improve the contaminant removal performance and regulate the variation of carbon source in integrated treatments. At different temperatures, the addition of the adjusting agents obviously improved the nitrogen and phosphorous removals. TN and TP removals were respectively increased by 29.41% and 23.83% in AC-100 treatment under 1-day HRT. Carbon source from dead algae was supplied as green microbial carbon source and Fe2+ was supplied as carbon source surrogate. COD concentration was increased to 30mg/L and above, so the problem of the shortage of carbon source was solved. Dead algae and Fe2+ as carbon source supplement or surrogate played significant role, which was proved by microbial community analysis. According to the denitrification performance in the treatments, dead algae as green microbial carbon source combined with iron and calcium carbonate was the optimal supplement carbon source in wastewater treatment.
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Affiliation(s)
- Zhao Zhimiao
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China
| | - Song Xinshan
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China.
| | - Zhao Yufeng
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China
| | - Xiao Yanping
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China
| | - Wang Yuhui
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China
| | - Wang Junfeng
- College of Environmental Science and Engineering, Donghua University, State Environmental Protection Engineering Center for Pollution Treatment and Control in Textile Industry, Shanghai 201620, China
| | - Yan Denghua
- China Institute of Water Resources and Hydropower Research, Beijing 100038, China
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49
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Zhang Y, Xu W, Xiang Y, Xie B, Liu H, Wu L, Liang D. Kinetics and gene diversity of denitrifying biocathode in biological electrochemical systems. RSC Adv 2017. [DOI: 10.1039/c7ra04070a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Biocathodic nitrogen degradation kinetics match Monod model and Pseudomonas play an important role on denitrification biocathodes with different nitrogen substrates.
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Affiliation(s)
- Yongjia Zhang
- Beijing Key Laboratory of Bio-inspired Energy Materials and Devices
- School of Space & Environment
- Beihang University
- Beijing 100191
- PR China
| | - Weiwei Xu
- Beijing Key Laboratory of Bio-inspired Energy Materials and Devices
- School of Space & Environment
- Beihang University
- Beijing 100191
- PR China
| | - Yan Xiang
- Beijing Key Laboratory of Bio-inspired Energy Materials and Devices
- School of Space & Environment
- Beihang University
- Beijing 100191
- PR China
| | - Beizhen Xie
- Institution of Environmental Biology and Life Support Technology
- School of Biological Science and Medical Engineering
- Beihang University
- Beijing 100191
- PR China
| | - Hong Liu
- Institution of Environmental Biology and Life Support Technology
- School of Biological Science and Medical Engineering
- Beihang University
- Beijing 100191
- PR China
| | - Lina Wu
- School of Environment and Energy Engineering
- Beijing University of Civil Engineering and Architecture
- Beijing 100044
- PR China
| | - Dawei Liang
- Beijing Key Laboratory of Bio-inspired Energy Materials and Devices
- School of Space & Environment
- Beihang University
- Beijing 100191
- PR China
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50
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Yang J, Ji X, Lu L, Ma H, Chen Y, Guo J, Fang F. Performance of an anaerobic membrane bioreactor in which granular sludge and dynamic filtration are integrated. BIOFOULING 2017; 33:36-44. [PMID: 27911097 DOI: 10.1080/08927014.2016.1262845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2016] [Accepted: 11/09/2016] [Indexed: 06/06/2023]
Abstract
To alleviate the fouling of a filter, simple substrates, dynamic filtration, and granular sludge were applied in an anaerobic membrane bioreactor (AnMBR). The results showed that under a transmembrane pressure < 20 kPa, the filter flux ranged between 15 and 20 l (m-2 h)-1 for a period of 30 days. The flux was higher than the typical flux of AnMBRs with conventional membranes and most current dynamic filters. In addition, the low cost of the filter avoided the need for a higher flux. Moreover, a stable granular sludge bed, which consumed all volatile fatty acids, was maintained. A compact fouling/filtration layer formed on the filter, which contributed to low effluent chemical oxygen demand concentrations and turbidity. In addition, substrate scarcity in the filtration zone resulted in the evolution of diverse bacteria on the filter.
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Affiliation(s)
- Jixiang Yang
- a Key Laboratory of Reservoir Aquatic Environment, Chongqing Institute of Green and Intelligent Technology , Chinese Academy of Sciences , Chongqing , China
| | - Xin Ji
- a Key Laboratory of Reservoir Aquatic Environment, Chongqing Institute of Green and Intelligent Technology , Chinese Academy of Sciences , Chongqing , China
- b School of Urban Construction and Environmental Engineering , Chongqing University , Chongqing , China
| | - Lunhui Lu
- a Key Laboratory of Reservoir Aquatic Environment, Chongqing Institute of Green and Intelligent Technology , Chinese Academy of Sciences , Chongqing , China
| | - Hua Ma
- b School of Urban Construction and Environmental Engineering , Chongqing University , Chongqing , China
| | - Youpeng Chen
- a Key Laboratory of Reservoir Aquatic Environment, Chongqing Institute of Green and Intelligent Technology , Chinese Academy of Sciences , Chongqing , China
| | - Jinsong Guo
- a Key Laboratory of Reservoir Aquatic Environment, Chongqing Institute of Green and Intelligent Technology , Chinese Academy of Sciences , Chongqing , China
| | - Fang Fang
- b School of Urban Construction and Environmental Engineering , Chongqing University , Chongqing , China
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