Imaging Orientation of a Single Molecular Hierarchical Self-Assembled Sheet: The Combined Power of a Vibrational Sum Frequency Generation Microscopy and Neural Network

In this work, we determined the tilt angles of molecular units in hierarchical self-assembled materials on a single-sheet level, which were not available previously. This was achieved by developing a fast line-scanning vibrational sum frequency generation (VSFG) hyperspectral imaging technique in combination with neural network analysis. Rapid VSFG imaging enabled polarization resolved images on a single sheet level to be measured quickly, circumventing technical challenges due to long-term optical instability. The polarization resolved hyperspectral images were then used to extract the supramolecular tilt angle of a self-assembly through a set of spectra-tilt angle relationships which were solved through neural network analysis. This unique combination of both novel techniques offers a new pathway to resolve molecular level structural information on self-assembled materials. Understanding these properties can further drive self-assembly design from a bottom-up approach for applications in biomimetic and drug delivery research.

Anchoring of a hydrophobic heptapeptide (AFILPTG) on silica facilitates peptide unfolding at the abiotic-biotic interface

A hydrophobic heptapeptide, with sequence AFILPTG, as part of a phage capsid protein binds effectively to silica particles carrying negative charge. Here, we explore the silica binding activity of the sequence as a short polypeptide with polar N and C terminals. To describe the structural changes that occur on binding, we fit experimental infrared, Raman and circular dichroism data for a number of structures simulated in the full configuration space of the hepta-peptide using replica exchange molecular dynamics. Quantum chemistry was used to compute normal modes of infrared and Raman spectra and establish a relationship to structures from MD data. To interpret the circular dichroism data, instead of empirical factoring of optical activity into helical/sheet/random components, we exploit natural transition orbital theory and specify the contributions of backbone amide units, side chain functional groups, water, sodium ions and silica to the observed transitions. Computed optical responses suggest a less folded backbone and importance of the N-terminal when close to silica. We further discuss the thermodynamics of the interplay of charged and hydrophobic moieties of the polypeptide on association with the silica surface. The outcomes of this study may assist in the engineering of novel artificial bio-silica heterostructures.

Structure and sum-frequency generation spectra of water on neutral hydroxylated silica surfaces

Structural organization and vibrational sum-frequency generation (VSFG) spectra of water on crystalline and amorphous neutral silica surfaces were investigated by classical molecular dynamics simulations. The liquid phase represented with neat water and 1 M NaCl solution was analysed in terms of bonded interfacial layer (BIL), diffuse layer (DL) and bulk region. The simulations show that the structure of BIL depends on the surface morphology and density of surface OH groups. The water-silanol H-bond network and BIL structure are mainly insensitive to the presence of ions in the liquid phase. Molecules in DL of SiO₂/neat water interfaces preferentially orient their OH bonds towards the surfaces. This effect is directly related to an effective negative charge of formally neutral surfaces. Ions of the electrolyte solution affect the intermolecular structure in DL by screening the surface electric field and by the chaotropic effect. Calculated phase-sensitive VSFG (Im[χ⁽²⁾]) spectrum of BIL features low-frequency negative and high-frequency positive bands. Characteristics of the positive band reflect the strength of water-surface interactions and surface crystallinity, while the position and shape of the negative band are common to all interfaces. The Im[χ⁽²⁾] spectrum of DL is dominated by a contribution from the third-order χ⁽³⁾ susceptibility with the sign of the contribution directly related to the sign of electrostatic potential in the interfacial region. The DL spectrum is strongly affected by the presence of solvated ions. The computed intensity and Im[χ⁽²⁾] spectra of the amorphous silica/NaCl solution interface are in a good agreement with the conventional and phase-sensitive experimental VSFG spectra of fused SiO₂/water system at low pH, in contrast to the spectra of the amorphous silica/neat water interface. Origins of the discrepancy are discussed.

Are hydrogen supramolecular structures being suppressed upon nanoscale confinement? The case of monohydroxy alcohols

In this paper, the molecular dynamics, H-bonding pattern and wettability of the primary and secondary monohydroxyalcohols, 2-ethyl-1-hexanol (2E1H), 2-ethyl-1-butanol (2E1B) and 5-methyl-3-heptanol (5M3H) infiltrated into native and functionalized silica and alumina pores having pore diameters, d = 4 nm and d = 10 nm, have been studied with the use of Broadband Dielectric (BDS) and Fourier Transform InfraRed (FTIR) spectroscopies, as well as contact angle measurements. We found significant differences in the behavior of alcohols forming chain- (2E1H, 2E1B) or micelle-like (5M3H) supramolecular structures despite of their similarities in the wettability and interfacial energy. It turned out that nanoassociates as well as H-bonds are more or less affected by the confinement dependently on the chemical structure and alcohol order. Moreover, a peculiar behavior of the self-assemblies at the interface was noted in the latter material (5M3H). Finally, it was found that irrespectively to the sample, type of pores, functionalization, the temperature evolution of Debye relaxation times, τ_D, of the confined systems deviates from the bulk behavior always at similar τ_D due to vitrification of the interfacial layer. This finding is a clear indication that unexpectedly dynamics (mobility) of the supramolecular structures close to the hydrophilic and hydrophobic surfaces is similar in each system.

Water Structure and Properties at Hydrophilic and Hydrophobic Surfaces

The properties of water on both molecular and macroscopic surfaces critically influence a wide range of physical behaviors, with applications spanning from membrane science to catalysis to protein engineering. Yet, our current understanding of water interfacing molecular and material surfaces is incomplete, in part because measurement of water structure and molecular-scale properties challenges even the most advanced experimental characterization techniques and computational approaches. This review highlights progress in the ongoing development of tools working to answer fundamental questions on the principles that govern the interactions between water and surfaces. One outstanding and critical question is what universal molecular signatures capture the hydrophobicity of different surfaces in an operationally meaningful way, since traditional macroscopic hydrophobicity measures like contact angles fail to capture even basic properties of molecular or extended surfaces with any heterogeneity at the nanometer length scale. Resolving this grand challenge will require close interactions between state-of-the-art experiments, simulations, and theory, spanning research groups and using agreed-upon model systems, to synthesize an integrated knowledge of solvation water structure, dynamics, and thermodynamics.

Dependence of water adsorption on the surface structure of silicon wafers aged under different environmental conditions

Most materials exposed to ambient air can adsorb water molecules and the adsorption capability strongly depends on the surface property. The water contact angle has been widely used as a measure for surface wettability; however, a question can still be asked whether the water contact angle can be used as an adequate sole predictor for water adsorption on the surface in humid air. In this paper, HF-etched silicon wafers were aged (oxidized) under different environmental conditions at room temperature to grow surface layers with varying water contact angles from ∼0° (fully hydrophilic) to ∼83° (highly hydrophobic), and water adsorption as a function of relative humidity (RH) was studied on such surfaces. The thickness and structure of the adsorbed water layer were found to depend on not only the surface wettability on each surface, but also the history of surface oxidation conditions. In particular, the silicon wafer surface oxidized in liquid water uptakes significantly more water from humid air than the fully-hydroxylated native oxide surface (SiO_x/OH), even though its water contact angle is higher than that on the SiO_x/OH surface. This could be attributed to the formation of a gel-like structure during oxidation in liquid water.

Dynamical and Structural Properties of Water in Silica Nanoconfinement: Impact of Pore Size, Ion Nature, and Electrolyte Concentration

In this study, we characterized the structure and the dynamics at a picosecond scale of water molecules in aqueous solutions with cations having various kosmotropic properties (XCl₂ where X = Ba²⁺, Ca²⁺, and Mg²⁺) confined in highly ordered mesoporous silica (MCM-41 and grafted MCM-41) by Fourier transform infrared spectroscopy and quasi-elastic neutron scattering. We pinpointed the critical pore size and the electrolyte concentration at which the influence of the ion nature becomes the main factor affecting the water properties. These results suggest that whatever the ions kosmotropic properties, for pore sizes ϕ_p < 2.6 nm and [XCl₂] ≤ 1 M, the water dynamics is mainly slowed down by the size of the confinement. For pore sizes of 6.6 nm, the water dynamics depends on the concentration and kosmotropic properties of the ion more than on the confinement. The water properties within the interfacial layer were also assessed and related to the surface ion excesses obtained by sorption isotherms. We showed that, for pore sizes ϕ_p ≥ 2.6 nm, the surface ion excess at the pore surface is the main driver affecting the structural properties of water molecules and their dynamics within the interfacial layer.

Hindered Isomerization at the Silica/Aqueous Interface: Surface Polarity or Restricted Solvation?

Time-resolved fluorescence measurements performed in a total internal reflection (TIR) geometry examined the photophysical behavior of coumarin 152 (C152) adsorbed to a silica/aqueous interface. Results imply that interfacial C152 has a remarkably different photoisomerization rate compared to its bulk solution value. C152's fluorescence in bulk water is dominated by a short, sub-nanosecond emission lifetime as the solute readily forms a nonemissive, twisted, intramolecular charge transfer (TICT) state. Time-resolved-TIR data from the silica/aqueous interface show that C152 emission contains a contribution from a longer-lived state (τ = 3.5 ns) that matches C152's fluorescence lifetime in nonpolar solvents where a photoexcited TICT state does not form. This long-lived excited state is assigned to C152 solvated in the interfacial region, where strong substrate-solvent hydrogen bonding prevents the aqueous solvent from stabilizing C152's TICT isomer. Similar results are observed for C152 in frozen water, emphasizing the silica surface's ability to restrict solvent mobility and change the interfacial solvation and reactivity from bulk solution limits.

Water immobilization by glass microspheres affects biological activity

We recently reported that the water holding capacity of myofibrillar protein hydrogels could be increased upon addition of small amounts of microparticles, particularly glass microspheres. Glass microspheres were found to decrease the spin-spin relaxation time (T₂) of water protons in the gels, which was interpreted as enhanced water binding by the glass. We were thus interested in determining whether the observed effects on water proton relaxation were a direct consequence of water-glass interactions. Here we show how glass microspheres reduce the mobility of pure water, reflected in large decreases in the T₂ of water protons, decreases in the self-diffusion coefficient of water molecules, a lower water activity, and strengthening of O-H bonds. Even though glass is considered an inert material, glass microspheres were shown to inhibit the growth of human embryonic kidney cells, and stimulate or inhibit the growth of leukemia and monocytic lymphoma cells in vitro, depending on dose and time. The germination of alfalfa seeds and the growth of E.coli cells were also inhibited upon exposure to glass microspheres. This work indicates that the properties and behavior of materials, even ones considered inert, can be affected by their size. These observations suggest possible toxicological consequences of exposure to microparticles, but also open us possibilities to affect cellular/organism function via modulation of macromolecular hydration.

A molecular dynamics study of the interaction of water with the external surface of silicalite-1

The modeling study of the interaction of water with the external surface of silicalite-1 reveals retention of H₂O molecules at the interface because of the formation of a structured water layer.

Non-equilibrium thermodynamics and collective vibrational modes of liquid water in an inhomogeneous electric field

In this experiment liquid water is subject to an inhomogeneous electric field (∇(2)Ea≈ 10(10) V m(2)) using a high voltage (20 kV) point-plane electrode system. Using interferometry it was found that the application of a strong electric field gradient to water generates local changes in the refractive index of the liquid, polarizes the surface and creates a downward moving electro-convective jet. A maximum temperature difference of 1 °C is measured in the immediate vicinity of the point electrode. Raman spectroscopy performed on water reveals an enhancement of the vibrational collective modes (3250 cm(-1)) as well as an increase in the local mode (3490 cm(-1)) energy. This bimodal enhancement indicates that the spectral changes are not due to temperature changes. The intense field gradient thus establishes an excited subpopulation of vibrational oscillators far from thermal equilibrium. Delocalization of the collective vibrational mode spatially expands this excited population beyond the microscale. Hindered rotational freedom due to electric field pinning of molecular dipoles retards the heat flow and generates a chemical potential gradient. These changes are responsible for the observed changes in the refractive index and temperature. It is demonstrated that polar liquids can thus support local non-equilibrium thermodynamic transient states critical to biochemical and environmental processes.

Water at Interfaces

The interfaces of neat water and aqueous solutions play a prominent role in many technological processes and in the environment. Examples of aqueous interfaces are ultrathin water films that cover most hydrophilic surfaces under ambient relative humidities, the liquid/solid interface which drives many electrochemical reactions, and the liquid/vapor interface, which governs the uptake and release of trace gases by the oceans and cloud droplets. In this article we review some of the recent experimental and theoretical advances in our knowledge of the properties of aqueous interfaces and discuss open questions and gaps in our understanding.

Vibrational relaxation and energy migration of N-methylacetamide in water: the role of nonbonded interactions

Nonequilibrium molecular dynamics (MD) simulations together with physics-based force fields are used to follow energy flow between vibrationally excited N-methylacetamide (NMA) and water. The simulations are carried out with a previously validated force field for NMA, based on a multipolar representation of the electrostatics, and with a new fluctuating point charge model. For the water solvent, a flexible and a rigid model was employed to distinguish between the role of inter- and intramolecular degrees of freedom. On a 10 ps time scale about 90% of the available energy goes into the solvent. The remaining energy resides within internal NMA-degrees of freedom from where energy flow takes place on longer time scales. The total amount of energy transferred to the solvent on the 10 ps time scale does not depend on whether the water molecules are rigid or flexible during the simulations. Vibrational energy relaxation time scales include two regimes: one on the several 100 fs time scale and a longer one, ranging from 6 to 10 ps. This longer time scale agrees with previous simulations but overestimates the experimentally determined relaxation time by a factor of 2, which can be explained by the classical treatment of the vibrations. Including a previously determined quantum correction factor brings the long time scale into quite favorable agreement with experiment. Coupling to the bending vibration of the water molecules in H-bonding contact with the excited C═O chromophore is substantial. The equilibrium and nonequilibrium distribution of the bending angles of the water molecules in contact with the local oscillator are non-Gaussian, and one approaches the other on the subpicosecond time scale. Analysis of the water velocity distribution suggests that the C═O vibrational energy relaxes into the solvent water shells in an impulsive fashion on a picosecond time scale.

Diffusion of atomic oxygen relevant to water formation in amorphous interstellar ices

Molecular dynamics (MD) simulations together with accurate physics-based force fields are employed to determine the mobility of atomic oxygen in amorphous ice at low temperatures, characteristic for conditions in interstellar ices. From the simulations it is found that the mobility of atomic oxygen ranges from 60 to 480 Ų ns⁻¹ in amorphous ice at temperatures between 50 and 200 K. Hence, the simulations establish that atomic oxygen is mobile to a certain degree and a chemical mechanism for water formation involving oxygen mobility is a realistic scenario. This is also confirmed by the computed migration barriers for oxygen diffusion by multiple umbrella sampling simulations, which yield barriers for diffusion in the range of 0.7–1.9 kcal mol⁻¹. The physics-based force field – based on a multipolar expansion of the electrostatic interactions – yields more pronounced energetics for oxygen migration pathways compared to the conventional point-charge models employed in typical simulations. Once formed, the computed solvation free energy suggests that atomic oxygen thermodynamically prefers to be localized inside amorphous ice and is available for chemical reaction, which may be relevant to water formation in and on grains.