1
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Zheng X, Duan X, Tu X, Jiang S, Song C. The Fusion of Microfluidics and Optics for On-Chip Detection and Characterization of Microalgae. MICROMACHINES 2021; 12:1137. [PMID: 34683188 PMCID: PMC8540680 DOI: 10.3390/mi12101137] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/05/2021] [Revised: 09/17/2021] [Accepted: 09/18/2021] [Indexed: 01/21/2023]
Abstract
It has been demonstrated that microalgae play an important role in the food, agriculture and medicine industries. Additionally, the identification and counting of the microalgae are also a critical step in evaluating water quality, and some lipid-rich microalgae species even have the potential to be an alternative to fossil fuels. However, current technologies for the detection and analysis of microalgae are costly, labor-intensive, time-consuming and throughput limited. In the past few years, microfluidic chips integrating optical components have emerged as powerful tools that can be used for the analysis of microalgae with high specificity, sensitivity and throughput. In this paper, we review recent optofluidic lab-on-chip systems and techniques used for microalgal detection and characterization. We introduce three optofluidic technologies that are based on fluorescence, Raman spectroscopy and imaging-based flow cytometry, each of which can achieve the determination of cell viability, lipid content, metabolic heterogeneity and counting. We analyze and summarize the merits and drawbacks of these micro-systems and conclude the direction of the future development of the optofluidic platforms applied in microalgal research.
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Affiliation(s)
| | | | | | | | - Chaolong Song
- School of Mechanical Engineering and Electronic Information, China University of Geosciences, Wuhan 430074, China; (X.Z.); (X.D.); (X.T.); (S.J.)
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2
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Ozdalgic B, Ustun M, Dabbagh SR, Haznedaroglu BZ, Kiraz A, Tasoglu S. Microfluidics for microalgal biotechnology. Biotechnol Bioeng 2021; 118:1545-1563. [PMID: 33410126 DOI: 10.1002/bit.27669] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Revised: 01/01/2021] [Accepted: 01/02/2021] [Indexed: 01/09/2023]
Abstract
Microalgae have expanded their roles as renewable and sustainable feedstocks for biofuel, smart nutrition, biopharmaceutical, cosmeceutical, biosensing, and space technologies. They accumulate valuable biochemical compounds from protein, carbohydrate, and lipid groups, including pigments and carotenoids. Microalgal biomass, which can be adopted for multivalorization under biorefinery settings, allows not only the production of various biofuels but also other value-added biotechnological products. However, state-of-the-art technologies are required to optimize yield, quality, and the economical aspects of both upstream and downstream processes. As such, the need to use microfluidic-based devices for both fundamental research and industrial applications of microalgae, arises due to their microscale sizes and dilute cultures. Microfluidics-based devices are superior to their competitors through their ability to perform multiple functions such as sorting and analyzing small amounts of samples (nanoliter to picoliter) with higher sensitivities. Here, we review emerging applications of microfluidic technologies on microalgal processes in cell sorting, cultivation, harvesting, and applications in biofuels, biosensing, drug delivery, and nutrition.
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Affiliation(s)
- Berin Ozdalgic
- Graduate School of Sciences and Engineering, Koc University, Sariyer, Istanbul, Turkey.,Department of Medical Services and Techniques, Advanced Vocational School, Dogus University, Istanbul, Turkey
| | - Merve Ustun
- Graduate School of Sciences and Engineering, Koc University, Sariyer, Istanbul, Turkey
| | - Sajjad Rahmani Dabbagh
- Department of Mechanical Engineering, Engineering Faculty, Koc University, Sariyer, Istanbul, Turkey.,Koc University Arcelik Research Center for Creative Industries (KUAR), Koc University, Sariyer, Istanbul, Turkey
| | - Berat Z Haznedaroglu
- Center for Life Sciences and Technologies, Bogazici University, Bebek, Istanbul, Turkey.,Institute of Environmental Sciences, Bogazici University, Bebek, Istanbul, Turkey
| | - Alper Kiraz
- Department of Physics, Koc University, Sariyer, Istanbul, Turkey.,Department of Electrical Engineering, Koc University, Sariyer, Istanbul, Turkey.,Koc University Research Center for Translational Medicine, Koc University, Sariyer, Istanbul, Turkey
| | - Savas Tasoglu
- Department of Mechanical Engineering, Engineering Faculty, Koc University, Sariyer, Istanbul, Turkey.,Koc University Arcelik Research Center for Creative Industries (KUAR), Koc University, Sariyer, Istanbul, Turkey.,Center for Life Sciences and Technologies, Bogazici University, Bebek, Istanbul, Turkey.,Koc University Research Center for Translational Medicine, Koc University, Sariyer, Istanbul, Turkey.,Institute of Biomedical Engineering, Bogazici University, Cengelkoy, Istanbul, Turkey
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3
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Improving ‘Lipid Productivity’ in Microalgae by Bilateral Enhancement of Biomass and Lipid Contents: A Review. SUSTAINABILITY 2020. [DOI: 10.3390/su12219083] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Microalgae have received widespread interest owing to their potential in biofuel production. However, economical microalgal biomass production is conditioned by enhancing the lipid accumulation without decreasing growth rate or by increasing both simultaneously. While extensive investigation has been performed on promoting the economic feasibility of microalgal-based biofuel production that aims to increase the productivity of microalgae species, only a handful of them deal with increasing lipid productivity (based on lipid contents and growth rate) in the feedstock production process. The purpose of this review is to provide an overview of the recent advances and novel approaches in promoting lipid productivity (depends on biomass and lipid contents) in feedstock production from strain selection to after-harvesting stages. The current study comprises two parts. In the first part, bilateral improving biomass/lipid production will be investigated in upstream measures, including strain selection, genetic engineering, and cultivation stages. In the second part, the enhancement of lipid productivity will be discussed in the downstream measure included in the harvesting and after-harvesting stages. An integrated approach involving the strategies for increasing lipid productivity in up- and down-stream measures can be a breakthrough approach that would promote the commercialization of market-driven microalgae-derived biofuel production.
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4
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Mohan A, Gupta P, Nair AP, Prabhakar A, Saiyed T. A microfluidic flow analyzer with integrated lensed optical fibers. BIOMICROFLUIDICS 2020; 14:054104. [PMID: 33062113 PMCID: PMC7532020 DOI: 10.1063/5.0013250] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Accepted: 09/14/2020] [Indexed: 06/11/2023]
Abstract
Rapid optical interrogation of flowing cells or particles is a powerful tool in the field of biomedical diagnostics. Determination of size and composition of fast-flowing cells, with diameters in the range of 2- 15 μ m , often require complex open-space optics and expensive high-speed cameras. In this work, a method to overcome these challenges by using a hydrodynamic flow-based microfluidic platform coupled with on-chip integrated fiber optics is reported. The lab-scale portable device developed uses a combination of on-chip lensed and non-lensed optical fibers for precision illumination. The narrow light beam produced by the lensed fiber ( f = 150 μ m ) enables precise optical analysis with high sensitivity. A planar arrangement of optical fibers at various angles facilitates multi-parametric analysis from a single point of interrogation. As proof of concept, the laboratory-scale portable bench-top prototype is used to measure fluorescence signals from CD4 immunostained cells and human blood samples. The performance of microfluidic flow analyzer is also compared to the conventional Guava® easyCyte 8HT flow cytometer.
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Affiliation(s)
- A Mohan
- Department of Electrical Engineering, Indian Institute of Technology Madras (IITM), Chennai 600036, India
| | - P Gupta
- Discovery Innovation Accelerator, Centre for Cellular and Molecular Platforms (C-CAMP), Bengaluru 560065, India
| | - A P Nair
- Discovery Innovation Accelerator, Centre for Cellular and Molecular Platforms (C-CAMP), Bengaluru 560065, India
| | - A Prabhakar
- Department of Electrical Engineering, Indian Institute of Technology Madras (IITM), Chennai 600036, India
| | - T Saiyed
- Discovery Innovation Accelerator, Centre for Cellular and Molecular Platforms (C-CAMP), Bengaluru 560065, India
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5
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Saad MG, Selahi A, Zoromba MS, Mekki L, El-Bana M, Dosoky NS, Nobles D, Shafik HM. A droplet-based gradient microfluidic to monitor and evaluate the growth of Chlorella vulgaris under different levels of nitrogen and temperatures. ALGAL RES 2019. [DOI: 10.1016/j.algal.2019.101657] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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6
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Wilken S, Yung CCM, Hamilton M, Hoadley K, Nzongo J, Eckmann C, Corrochano-Luque M, Poirier C, Worden AZ. The need to account for cell biology in characterizing predatory mixotrophs in aquatic environments. Philos Trans R Soc Lond B Biol Sci 2019; 374:20190090. [PMID: 31587652 PMCID: PMC6792458 DOI: 10.1098/rstb.2019.0090] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/24/2019] [Indexed: 12/16/2022] Open
Abstract
Photosynthesis in eukaryotes first arose through phagocytotic processes wherein an engulfed cyanobacterium was not digested, but instead became a permanent organelle. Other photosynthetic lineages then arose when eukaryotic cells engulfed other already photosynthetic eukaryotic cells. Some of the resulting lineages subsequently lost their ability for phagocytosis, while many others maintained the ability to do both processes. These mixotrophic taxa have more complicated ecological roles, in that they are both primary producers and consumers that can shift more towards producing the organic matter that forms the base of aquatic food chains, or towards respiring and releasing CO2. We still have much to learn about which taxa are predatory mixotrophs as well as about the physiological consequences of this lifestyle, in part, because much of the diversity of unicellular eukaryotes in aquatic ecosystems remains uncultured. Here, we discuss existing methods for studying predatory mixotrophs, their individual biases, and how single-cell approaches can enhance knowledge of these important taxa. The question remains what the gold standard should be for assigning a mixotrophic status to ill-characterized or uncultured taxa-a status that dictates how organisms are incorporated into carbon cycle models and how their ecosystem roles may shift in future lakes and oceans. This article is part of a discussion meeting issue 'Single cell ecology'.
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Affiliation(s)
- Susanne Wilken
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1090GE Amsterdam, Noord-Holland, The Netherlands
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Department of Marine Biology and Oceanography, Institute of Marine Sciences (ICM)-CSIC, 08003 Barcelona, Catalunya, Spain
| | - Charmaine C. M. Yung
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Ocean EcoSystems Biology Unit, GEOMAR Helmholtz Centre for Ocean Research Kiel, 24148 Kiel, Schleswig-Holstein, Germany
| | - Maria Hamilton
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Division of Physical and Biological Sciences, UC Santa Cruz, Santa Cruz, CA 95064, USA
| | - Kenneth Hoadley
- Ocean EcoSystems Biology Unit, GEOMAR Helmholtz Centre for Ocean Research Kiel, 24148 Kiel, Schleswig-Holstein, Germany
| | - Juliana Nzongo
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Division of Physical and Biological Sciences, UC Santa Cruz, Santa Cruz, CA 95064, USA
| | - Charlotte Eckmann
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Division of Physical and Biological Sciences, UC Santa Cruz, Santa Cruz, CA 95064, USA
| | | | - Camille Poirier
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Ocean EcoSystems Biology Unit, GEOMAR Helmholtz Centre for Ocean Research Kiel, 24148 Kiel, Schleswig-Holstein, Germany
| | - Alexandra Z. Worden
- Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
- Ocean EcoSystems Biology Unit, GEOMAR Helmholtz Centre for Ocean Research Kiel, 24148 Kiel, Schleswig-Holstein, Germany
- Division of Physical and Biological Sciences, UC Santa Cruz, Santa Cruz, CA 95064, USA
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7
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Saad MG, Dosoky NS, Khan MS, Zoromba MS, Mekki L, El-Bana M, Nobles D, Shafik HM. High-Throughput Screening of Chlorella Vulgaris Growth Kinetics inside a Droplet-Based Microfluidic Device under Irradiance and Nitrate Stress Conditions. Biomolecules 2019; 9:biom9070276. [PMID: 31336821 PMCID: PMC6681396 DOI: 10.3390/biom9070276] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Revised: 07/07/2019] [Accepted: 07/11/2019] [Indexed: 01/10/2023] Open
Abstract
Biodiesel is an eco-friendly renewable fuel that can be derived from microalgae. Maximization of biomass and lipid productivities are considered the main challenges for algal biodiesel production. Since conventional batch cultures are time-, space-, and reagent-consuming with many restrictions to apply many replicates, microfluidic technology has recently emerged as an alternative low-cost and efficient technology with high throughput repeatability and reproducibility. Different applications of microfluidic devices in algal biotechnology have been reported, including cell identification, sorting, trapping, and metabolic screening. In this work, Chlorella vulgaris was investigated by encapsulating in a simple droplet-based micro-array device at different light intensities of 20, 80, and 200 µmol/m2/s combined with different nitrate concentrations of 17.6, 8.8, and 4.4 mM. The growth results for C. vulgaris within microfluidic device were compared to the conventional batch culture method. In addition, the effect of combined stress of deficiencies in irradiance and nitrogen availability were studied to illustrate their impact on the metabolic profiling of microalgae. The results showed that the most optimum favorable culturing conditions for Chlorella vulgaris growth within the microfluidic channels were 17.6 mM and 80 µmol/m2/s.
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Affiliation(s)
- Marwa Gamal Saad
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA.
- Department of Botany, Faculty of Science, Port Said University, Port Said 42521, Egypt.
| | - Noura Sayed Dosoky
- Department of Chemistry, University of Alabama in Huntsville, Huntsville, AL 35899, USA.
| | - Muhammad Shuja Khan
- Department of Electrical and Computer Engineering, University of Alabama in Huntsville, Huntsville, AL 35899, USA
| | - Mohamed Shafick Zoromba
- Chemical and Materials Engineering Department, King Abdulaziz University, Rabigh 21911, Saudi Arabia
- Department of Chemistry, Faculty of Science, Port-Said University, Port Said 42521, Egypt
| | - Laila Mekki
- Department of Botany, Faculty of Science, Suez Canal University, Ismailia, Egypt
| | - Magdy El-Bana
- Department of Botany, Faculty of Science, Port Said University, Port Said 42521, Egypt
| | - David Nobles
- UTEX Culture Collection of Algae, College of Natural Sciences, University of Texas at Austin, Austin, TX 78712, USA
| | - Hesham Mohamed Shafik
- Department of Botany, Faculty of Science, Port Said University, Port Said 42521, Egypt
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8
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Bodénès P, Wang HY, Lee TH, Chen HY, Wang CY. Microfluidic techniques for enhancing biofuel and biorefinery industry based on microalgae. BIOTECHNOLOGY FOR BIOFUELS 2019; 12:33. [PMID: 30815031 PMCID: PMC6376642 DOI: 10.1186/s13068-019-1369-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Accepted: 02/03/2019] [Indexed: 05/03/2023]
Abstract
This review presents a critical assessment of emerging microfluidic technologies for the application on biological productions of biofuels and other chemicals from microalgae. Comparisons of cell culture designs for the screening of microalgae strains and growth conditions are provided with three categories: mechanical traps, droplets, or microchambers. Emerging technologies for the in situ characterization of microalgae features and metabolites are also presented and evaluated. Biomass and secondary metabolite productivities obtained at microscale are compared with the values obtained at bulk scale to assess the feasibility of optimizing large-scale operations using microfluidic platforms. The recent studies in microsystems for microalgae pretreatment, fractionation and extraction of metabolites are also reviewed. Finally, comments toward future developments (high-pressure/-temperature process; solvent-resistant devices; omics analysis, including genome/epigenome, proteome, and metabolome; biofilm reactors) of microfluidic techniques for microalgae applications are provided.
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Affiliation(s)
- Pierre Bodénès
- Department of Power Mechanical Engineering, National Tsing Hua University, Hsinchu, Taiwan
| | - Hsiang-Yu Wang
- Department of Engineering and System Science, National Tsing Hua University, Hsinchu, Taiwan
- Institute of Nuclear Science, National Tsing Hua University, Hsinchu, Taiwan
| | - Tsung-Hua Lee
- Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan
| | - Hung-Yu Chen
- Department of Engineering and System Science, National Tsing Hua University, Hsinchu, Taiwan
| | - Chun-Yen Wang
- Department of Engineering and System Science, National Tsing Hua University, Hsinchu, Taiwan
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9
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Girault M, Beneyton T, Del Amo Y, Baret JC. Microfluidic technology for plankton research. Curr Opin Biotechnol 2018; 55:134-150. [PMID: 30326407 PMCID: PMC6378650 DOI: 10.1016/j.copbio.2018.09.010] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Revised: 09/19/2018] [Accepted: 09/20/2018] [Indexed: 02/06/2023]
Abstract
Plankton produces numerous chemical compounds used in cosmetics and functional foods. They also play a key role in the carbon budget on the Earth. In a context of global change, it becomes important to understand the physiological response of these microorganisms to changing environmental conditions. Their adaptations and the response to specific environmental conditions are often restricted to a few active cells or individuals in large populations. Using analytical capabilities at the subnanoliter scale, microfluidic technology has also demonstrated a high potential in biological assays. Here, we review recent advances in microfluidic technologies to overcome the current challenges in high content analysis both at population and the single cell level.
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Affiliation(s)
- Mathias Girault
- Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, Université de Bordeaux, Centre National de la Recherche Scientifique, 33600 Pessac, France
| | - Thomas Beneyton
- Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, Université de Bordeaux, Centre National de la Recherche Scientifique, 33600 Pessac, France
| | - Yolanda Del Amo
- Université de Bordeaux - OASU, UMR CNRS 5805 EPOC (Environnements et Paléoenvironnements Océaniques et Continentaux), Station Marine d'Arcachon, 33120 Arcachon, France
| | - Jean-Christophe Baret
- Centre de Recherche Paul Pascal, Unité Mixte de Recherche 5031, Université de Bordeaux, Centre National de la Recherche Scientifique, 33600 Pessac, France.
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10
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Serôdio J, Schmidt W, Frommlet JC, Christa G, Nitschke MR. An LED-based multi-actinic illumination system for the high throughput study of photosynthetic light responses. PeerJ 2018; 6:e5589. [PMID: 30202661 PMCID: PMC6128260 DOI: 10.7717/peerj.5589] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Accepted: 08/15/2018] [Indexed: 11/20/2022] Open
Abstract
The responses of photosynthetic organisms to light stress are of interest for both fundamental and applied research. Functional traits related to the photoinhibition, the light-induced loss of photosynthetic efficiency, are particularly interesting as this process is a key limiting factor of photosynthetic productivity in algae and plants. The quantitative characterization of light responses is often time-consuming and calls for cost-effective high throughput approaches that enable the fast screening of multiple samples. Here we present a novel illumination system based on the concept of ‘multi-actinic imaging’ of in vivo chlorophyll fluorescence. The system is based on the combination of an array of individually addressable low power RGBW LEDs and custom-designed well plates, allowing for the independent illumination of 64 samples through the digital manipulation of both exposure duration and light intensity. The illumination system is inexpensive and easily fabricated, based on open source electronics, off-the-shelf components, and 3D-printed parts, and is optimized for imaging of chlorophyll fluorescence. The high-throughput potential of the system is illustrated by assessing the functional diversity in light responses of marine macroalgal species, through the fast and simultaneous determination of kinetic parameters characterizing the response to light stress of multiple samples. Although the presented illumination system was primarily designed for the measurement of phenotypic traits related to photosynthetic activity and photoinhibition, it can be potentially used for a number of alternative applications, including the measurement of chloroplast phototaxis and action spectra, or as the basis for microphotobioreactors.
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Affiliation(s)
- João Serôdio
- Department of Biology and CESAM-Centre for Environmental and Marine Studies, University of Aveiro, Aveiro, Portugal
| | - William Schmidt
- Department of Biology and CESAM-Centre for Environmental and Marine Studies, University of Aveiro, Aveiro, Portugal
| | - Jörg C Frommlet
- Department of Biology and CESAM-Centre for Environmental and Marine Studies, University of Aveiro, Aveiro, Portugal
| | - Gregor Christa
- Department of Biology and CESAM-Centre for Environmental and Marine Studies, University of Aveiro, Aveiro, Portugal
| | - Matthew R Nitschke
- Department of Biology and CESAM-Centre for Environmental and Marine Studies, University of Aveiro, Aveiro, Portugal
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11
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12
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Podevin M, Fotidis IA, Angelidaki I. Microalgal process-monitoring based on high-selectivity spectroscopy tools: status and future perspectives. Crit Rev Biotechnol 2017; 38:704-718. [DOI: 10.1080/07388551.2017.1398132] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Michael Podevin
- Department of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark
| | - Ioannis A. Fotidis
- Department of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark
| | - Irini Angelidaki
- Department of Environmental Engineering, Technical University of Denmark, Lyngby, Denmark
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13
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Xu Z, Wang Y, Chen Y, Spalding MH, Dong L. Microfluidic chip for automated screening of carbon dioxide conditions for microalgal cell growth. BIOMICROFLUIDICS 2017; 11:064104. [PMID: 29204245 PMCID: PMC5699919 DOI: 10.1063/1.5012508] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2017] [Accepted: 11/06/2017] [Indexed: 05/27/2023]
Abstract
This paper reports on a microfluidic device capable of screening carbon dioxide (CO2) conditions for microalgal cell growth. The device mainly consists of a microfluidic cell culture (MCC) unit, a gas concentration gradient generator (CGG), and an in-line cell growth optical measurement unit. The MCC unit is structured with multiple aqueous-filled cell culture channels at the top layer, multiple CO2 flow channels at the bottom layer, and a commercial hydrophobic gas semipermeable membrane sandwiched between the two channel layers. The CGG unit provides different CO2 concentrations to support photosynthesis of microalgae in the culture channels. The integration of the commercial gas semipermeable membrane into the cell culture device allows rapid mass transport and uniform distribution of CO2 inside the culture medium without using conventional agitation-assisted convection methods, because the diffusion of CO2 from the gas flow channels to the culture channels is fast over a small length scale. In addition, automated in-line monitoring of microalgal cell growth is realized via the optical measurement unit that is able to detect changes in the light intensity transmitted through the cell culture in the culture channels. The microfluidic device also allows a simple grayscale analysis method to quantify the cell growth. The utility of the system is validated by growing Chlamydomonas reinhardtii cells under different low or very-low CO2 levels below the nominal ambient CO2 concentration.
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Affiliation(s)
- Zhen Xu
- Department of Electrical and Computer Engineering, Iowa State University, Ames, Iowa 50011, USA
| | - Yingjun Wang
- Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, Iowa 50011, USA
| | - Yuncong Chen
- Department of Electrical and Computer Engineering, Iowa State University, Ames, Iowa 50011, USA
| | - Martin H Spalding
- Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, Iowa 50011, USA
| | - Liang Dong
- Department of Electrical and Computer Engineering, Iowa State University, Ames, Iowa 50011, USA
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14
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Asghari M, Serhatlioglu M, Ortaç B, Solmaz ME, Elbuken C. Sheathless Microflow Cytometry Using Viscoelastic Fluids. Sci Rep 2017; 7:12342. [PMID: 28955054 PMCID: PMC5617843 DOI: 10.1038/s41598-017-12558-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2017] [Accepted: 09/06/2017] [Indexed: 11/17/2022] Open
Abstract
Microflow cytometry is a powerful technique for characterization of particles suspended in a solution. In this work, we present a microflow cytometer based on viscoelastic focusing. 3D single-line focusing of microparticles was achieved in a straight capillary using viscoelastic focusing which alleviated the need for sheath flow or any other actuation mechanism. Optical detection was performed by fiber coupled light source and photodetectors. Using this system, we present the detection of microparticles suspended in three different viscoelastic solutions. The rheological properties of the solutions were measured and used to assess the focusing performance both analytically and numerically. The results were verified experimentally, and it has been shown that polyethlyene oxide (PEO) and hyaluronic acid (HA) based sheathless microflow cytometer demonstrates similar performance to state-of-the art flow cytometers. The sheathless microflow cytometer was shown to present 780 particles/s throughput and 5.8% CV for the forward scatter signal for HA-based focusing. The presented system is composed of a single capillary to accommodate the fluid and optical fibers to couple the light to the fluid of interest. Thanks to its simplicity, the system has the potential to widen the applicability of microflow cytometers.
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Affiliation(s)
- Mohammad Asghari
- UNAM - National Nanotechnology Research Center, Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Murat Serhatlioglu
- UNAM - National Nanotechnology Research Center, Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Bülend Ortaç
- UNAM - National Nanotechnology Research Center, Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey
| | - Mehmet E Solmaz
- Department of Electrical and Electronics Engineering, Izmir Katip Celebi University, 35620, Izmir, Turkey
| | - Caglar Elbuken
- UNAM - National Nanotechnology Research Center, Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey.
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15
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Cabanelas ITD, Fernandes C, Kleinegris DM, Wijffels RH, Barbosa MJ. Cell diameter doesn't affect lipid productivity of Chlorococcum littorale. ALGAL RES 2016. [DOI: 10.1016/j.algal.2016.02.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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16
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Reece A, Xia B, Jiang Z, Noren B, McBride R, Oakey J. Microfluidic techniques for high throughput single cell analysis. Curr Opin Biotechnol 2016; 40:90-96. [PMID: 27032065 DOI: 10.1016/j.copbio.2016.02.015] [Citation(s) in RCA: 101] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2015] [Revised: 02/13/2016] [Accepted: 02/15/2016] [Indexed: 12/11/2022]
Abstract
The microfabrication of microfluidic control systems and the development of increasingly sensitive molecular amplification tools have enabled the miniaturization of single cells analytical platforms. Only recently has the throughput of these platforms increased to a level at which populations can be screened at the single cell level. Techniques based upon both active and passive manipulation are now capable of discriminating between single cell phenotypes for sorting, diagnostic or prognostic applications in a variety of clinical scenarios. The introduction of multiphase microfluidics enables the segmentation of single cells into biochemically discrete picoliter environments. The combination of these techniques are enabling a class of single cell analytical platforms within great potential for data driven biomedicine, genomics and transcriptomics.
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Affiliation(s)
- Amy Reece
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States
| | - Bingzhao Xia
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States
| | - Zhongliang Jiang
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States
| | - Benjamin Noren
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States
| | - Ralph McBride
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States
| | - John Oakey
- Department of Chemical Engineering, University of Wyoming, 1000 East University Avenue, Laramie, WY 82070, United States.
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17
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Microfluidic high-throughput selection of microalgal strains with superior photosynthetic productivity using competitive phototaxis. Sci Rep 2016; 6:21155. [PMID: 26852806 PMCID: PMC4745075 DOI: 10.1038/srep21155] [Citation(s) in RCA: 51] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Accepted: 11/30/2015] [Indexed: 12/02/2022] Open
Abstract
Microalgae possess great potential as a source of sustainable energy, but the intrinsic inefficiency of photosynthesis is a major challenge to realize this potential. Photosynthetic organisms evolved phototaxis to find optimal light condition for photosynthesis. Here we report a microfluidic screening using competitive phototaxis of the model alga, Chlamydomonas reinhardtii, for rapid isolation of strains with improved photosynthetic efficiencies. We demonstrated strong relationship between phototaxis and photosynthetic efficiency by quantitative analysis of phototactic response at the single-cell level using a microfluidic system. Based on this positive relationship, we enriched the strains with improved photosynthetic efficiency by isolating cells showing fast phototactic responses from a mixture of 10,000 mutants, thereby greatly improving selection efficiency over 8 fold. Among 147 strains isolated after screening, 94.6% showed improved photoautotrophic growth over the parental strain. Two mutants showed much improved performances with up to 1.9- and 8.1-fold increases in photoautotrophic cell growth and lipid production, respectively, a substantial improvement over previous approaches. We identified candidate genes that might be responsible for fast phototactic response and improved photosynthesis, which can be useful target for further strain engineering. Our approach provides a powerful screening tool for rapid improvement of microalgal strains to enhance photosynthetic productivity.
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18
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Juang YJ, Chang JS. Applications of microfluidics in microalgae biotechnology: A review. Biotechnol J 2016; 11:327-35. [DOI: 10.1002/biot.201500278] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Revised: 10/29/2015] [Accepted: 12/25/2015] [Indexed: 11/08/2022]
Affiliation(s)
- Yi-Je Juang
- Department of Chemical Engineering; National Cheng Kung University; Tainan Taiwan
| | - Jo-Shu Chang
- Department of Chemical Engineering; National Cheng Kung University; Tainan Taiwan
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19
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Kim Y, Jeong SN, Kim B, Kim DP, Cho YK. Rapid and Automated Quantification of Microalgal Lipids on a Spinning Disc. Anal Chem 2015; 87:7865-71. [DOI: 10.1021/acs.analchem.5b01570] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Yubin Kim
- Department
of Biomedical Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 689-798, South Korea
| | | | | | | | - Yoon-Kyoung Cho
- Department
of Biomedical Engineering, Ulsan National Institute of Science and Technology (UNIST), UNIST-gil 50, Ulsan 689-798, South Korea
- Center for Soft
and Living Matter, Institute for Basic Science (IBS), UNIST-gil 50, Ulsan 689-798, South Korea
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20
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Cavonius L, Fink H, Kiskis J, Albers E, Undeland I, Enejder A. Imaging of lipids in microalgae with coherent anti-stokes Raman scattering microscopy. PLANT PHYSIOLOGY 2015; 167:603-16. [PMID: 25583924 PMCID: PMC4348760 DOI: 10.1104/pp.114.252197] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Microalgae have great prospects as a sustainable resource of lipids for refinement into nutraceuticals and biodiesel, which increases the need for detailed insights into their intracellular lipid synthesis/storage mechanisms. As an alternative strategy to solvent- and label-based lipid quantification techniques, we introduce time-gated coherent anti-Stokes Raman scattering (CARS) microscopy for monitoring lipid contents in living algae, despite strong autofluorescence from the chloroplasts, at approximately picogram and subcellular levels by probing inherent molecular vibrations. Intracellular lipid droplet synthesis was followed in Phaeodactylum tricornutum algae grown under (1) light/nutrient-replete (control [Ctrl]), (2) light-limited (LL), and (3) nitrogen-starved (NS) conditions. Good correlation (r(2) = 0.924) was found between lipid volume data yielded by CARS microscopy and total fatty acid content obtained from gas chromatography-mass spectrometry analysis. In Ctrl and LL cells, micron-sized lipid droplets were found to increase in number throughout the growth phases, particularly in the stationary phase. During more excessive lipid accumulation, as observed in NS cells, promising commercial harvest as biofuels and nutritional lipids, several micron-sized droplets were present already initially during cultivation, which then fused into a single giant droplet toward stationary phase alongside with new droplets emerging. CARS microspectroscopy further indicated lower lipid fluidity in NS cells than in Ctrl and LL cells, potentially due to higher fatty acid saturation. This agreed with the fatty acid profiles gathered by gas chromatography-mass spectrometry. CARS microscopy could thus provide quantitative and semiqualitative data at the single-cell level along with important insights into lipid-accumulating mechanisms, here revealing two different modes for normal and excessive lipid accumulation.
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Affiliation(s)
- Lillie Cavonius
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
| | - Helen Fink
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
| | - Juris Kiskis
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
| | - Eva Albers
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
| | - Ingrid Undeland
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
| | - Annika Enejder
- Division of Life Science, Department of Chemical and Biological Engineering, Chalmers University of Technology, SE-412 96 Gothenburg, Sweden
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21
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Havlik I, Scheper T, Reardon KF. Monitoring of Microalgal Processes. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2015; 153:89-142. [PMID: 26289537 DOI: 10.1007/10_2015_328] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Process monitoring, which can be defined as the measurement of process variables with the smallest possible delay, is combined with process models to form the basis for successful process control. Minimizing the measurement delay leads inevitably to employing online, in situ sensors where possible, preferably using noninvasive measurement methods with stable, low-cost sensors. Microalgal processes have similarities to traditional bioprocesses but also have unique monitoring requirements. In general, variables to be monitored in microalgal processes can be categorized as physical, chemical, and biological, and they are measured in gaseous, liquid, and solid (biological) phases. Physical and chemical process variables can be usually monitored online using standard industrial sensors. The monitoring of biological process variables, however, relies mostly on sensors developed and validated using laboratory-scale systems or uses offline methods because of difficulties in developing suitable online sensors. Here, we review current technologies for online, in situ monitoring of all types of process parameters of microalgal cultivations, with a focus on monitoring of biological parameters. We discuss newly introduced methods for measuring biological parameters that could be possibly adapted for routine online use, should be preferably noninvasive, and are based on approaches that have been proven in other bioprocesses. New sensor types for measuring physicochemical parameters using optical methods or ion-specific field effect transistor (ISFET) sensors are also discussed. Reviewed methods with online implementation or online potential include measurement of irradiance, biomass concentration by optical density and image analysis, cell count, chlorophyll fluorescence, growth rate, lipid concentration by infrared spectrophotometry, dielectric scattering, and nuclear magnetic resonance. Future perspectives are discussed, especially in the field of image analysis using in situ microscopy, infrared spectrophotometry, and software sensor systems.
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Affiliation(s)
- Ivo Havlik
- Institute of Technical Chemistry, Leibniz University Hannover, Callinstrasse 5, 30167, Hannover, Germany.
| | - Thomas Scheper
- Institute of Technical Chemistry, Leibniz University Hannover, Callinstrasse 5, 30167, Hannover, Germany
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22
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Sun D, Lu J, Chen Z. Microfluidic contactless conductivity cytometer for electrical cell sensing and counting. RSC Adv 2015. [DOI: 10.1039/c5ra08371k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
An integrated and cost-effective microfluidic contactless conductivity cytometer for cell sensing and counting.
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Affiliation(s)
- Duanping Sun
- School of Pharmaceutical Sciences
- Sun Yat-Sen University
- Guangzhou 510006
- China
| | - Jing Lu
- School of Pharmaceutical Sciences
- Sun Yat-Sen University
- Guangzhou 510006
- China
| | - Zuanguang Chen
- School of Pharmaceutical Sciences
- Sun Yat-Sen University
- Guangzhou 510006
- China
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23
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Valle KC, Nymark M, Aamot I, Hancke K, Winge P, Andresen K, Johnsen G, Brembu T, Bones AM. System responses to equal doses of photosynthetically usable radiation of blue, green, and red light in the marine diatom Phaeodactylum tricornutum. PLoS One 2014; 9:e114211. [PMID: 25470731 PMCID: PMC4254936 DOI: 10.1371/journal.pone.0114211] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2014] [Accepted: 11/05/2014] [Indexed: 11/21/2022] Open
Abstract
Due to the selective attenuation of solar light and the absorption properties of seawater and seawater constituents, free-floating photosynthetic organisms have to cope with rapid and unpredictable changes in both intensity and spectral quality. We have studied the transcriptional, metabolic and photo-physiological responses to light of different spectral quality in the marine diatom Phaeodactylum tricornutum through time-series studies of cultures exposed to equal doses of photosynthetically usable radiation of blue, green and red light. The experiments showed that short-term differences in gene expression and profiles are mainly light quality-dependent. Transcription of photosynthesis-associated nuclear genes was activated mainly through a light quality-independent mechanism likely to rely on chloroplast-to-nucleus signaling. In contrast, genes encoding proteins important for photoprotection and PSII repair were highly dependent on a blue light receptor-mediated signal. Changes in energy transfer efficiency by light-harvesting pigments were spectrally dependent; furthermore, a declining trend in photosynthetic efficiency was observed in red light. The combined results suggest that diatoms possess a light quality-dependent ability to activate photoprotection and efficient repair of photodamaged PSII. In spite of approximately equal numbers of PSII-absorbed quanta in blue, green and red light, the spectral quality of light is important for diatom responses to ambient light conditions.
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Affiliation(s)
- Kristin Collier Valle
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Marianne Nymark
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Inga Aamot
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Kasper Hancke
- Institute of Biology, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
| | - Per Winge
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Kjersti Andresen
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Geir Johnsen
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Tore Brembu
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
| | - Atle M. Bones
- Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway
- * E-mail:
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24
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Lim HS, Kim JYH, Kwak HS, Sim SJ. Integrated Microfluidic Platform for Multiple Processes from Microalgal Culture to Lipid Extraction. Anal Chem 2014; 86:8585-92. [DOI: 10.1021/ac502324c] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Hyun Seok Lim
- Department
of Chemical and
Biological Engineering, Korea University, Seoul, 136-713, Republic of Korea
| | - Jaoon Y. H. Kim
- Department
of Chemical and
Biological Engineering, Korea University, Seoul, 136-713, Republic of Korea
| | - Ho Seok Kwak
- Department
of Chemical and
Biological Engineering, Korea University, Seoul, 136-713, Republic of Korea
| | - Sang Jun Sim
- Department
of Chemical and
Biological Engineering, Korea University, Seoul, 136-713, Republic of Korea
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25
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Kim HS, Weiss TL, Thapa HR, Devarenne TP, Han A. A microfluidic photobioreactor array demonstrating high-throughput screening for microalgal oil production. LAB ON A CHIP 2014; 14:1415-25. [PMID: 24496295 DOI: 10.1039/c3lc51396c] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Microalgae are envisioned as a future source of renewable oil. The feasibility of producing high-value biomolecules from microalgae is strongly dependent on developing strains with increased productivity and environmental tolerance, understanding algal gene regulation, and optimizing growth conditions for higher production of target molecules. We present a high-throughput microfluidic microalgal photobioreactor array capable of applying 64 different light conditions to arrays of microscale algal photobioreactors and apply this device to investigate how light conditions influence algal growth and oil production. Using the green colony-forming microalga Botryococcus braunii, the light intensity and light-dark cycle conditions were identified that induced 1.8-fold higher oil accumulation over the typically used culture conditions. Additionally, the studies revealed that the condition under which maximum oil production occurs is significantly different from that of maximum growth. This screening test was accomplished using the developed photobioreactor array at 250 times higher throughput compared to conventional flask-scale photobioreactors.
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Affiliation(s)
- Hyun Soo Kim
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, Texas 77843, USA.
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26
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Mandas A, Dessì S. Mononuclear cells in dementia. Clin Chim Acta 2014; 431:278-87. [DOI: 10.1016/j.cca.2014.02.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2013] [Revised: 02/15/2014] [Accepted: 02/18/2014] [Indexed: 12/14/2022]
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27
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Measurement of Lipid Droplet Accumulation Kinetics in Chlamydomonas reinhardtii Using Seoul-Fluor. ENERGIES 2013. [DOI: 10.3390/en6115703] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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