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For: Koeppe B, Pylaeva SA, Allolio C, Sebastiani D, Nibbering ETJ, Denisov GS, Limbach HH, Tolstoy PM. Polar solvent fluctuations drive proton transfer in hydrogen bonded complexes of carboxylic acid with pyridines: NMR, IR and ab initio MD study. Phys Chem Chem Phys 2018;19:1010-1028. [PMID: 27942642 DOI: 10.1039/c6cp06677a] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Number Cited by Other Article(s)
1
Jóźwiak K, Jezierska A, Panek JJ, Kochel A, Łydżba-Kopczyńska B, Filarowski A. Very Strong Hydrogen Bond in Nitrophthalic Cocrystals. Molecules 2024;29:3565. [PMID: 39124970 PMCID: PMC11314142 DOI: 10.3390/molecules29153565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Revised: 07/22/2024] [Accepted: 07/26/2024] [Indexed: 08/12/2024]  Open
2
Tupikina EY, Sigalov MV, Alkhuder O, Tolstoy PM. Charge Relay Without Proton Transfer: Coupling of Two Short Hydrogen Bonds via Imidazole in Models of Catalytic Triad of Serine Protease Active Site. Chemphyschem 2024;25:e202300970. [PMID: 38563616 DOI: 10.1002/cphc.202300970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 03/01/2024] [Accepted: 03/27/2024] [Indexed: 04/04/2024]
3
Shitov DA, Krutin DV, Tupikina EY. Mutual influence of non-covalent interactions formed by imidazole: A systematic quantum-chemical study. J Comput Chem 2024;45:1046-1060. [PMID: 38216334 DOI: 10.1002/jcc.27309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 12/28/2023] [Accepted: 12/29/2023] [Indexed: 01/14/2024]
4
Chhetri A, Karthick K, Karmakar A, Kundu S, Mitra J. Melamine-Based Hydrogen-bonded Systems as Organoelectrocatalysts for Water Oxidation Reaction. CHEMSUSCHEM 2023;16:e202300220. [PMID: 36852710 DOI: 10.1002/cssc.202300220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 02/22/2023] [Indexed: 06/10/2023]
5
Li B, Zhang Y, Wang J, Yan B, Liang J, Dong Y, Zhou Q. Fast and Reversibly Humidity-Responsive Fluorescence Based on AIEgen Proton Transfer. ACS APPLIED MATERIALS & INTERFACES 2022;14:49119-49127. [PMID: 36256864 DOI: 10.1021/acsami.2c13652] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
6
Joerg F, Schröder C. Polarizable molecular dynamics simulations on the conductivity of pure 1-methylimidazolium acetate systems. Phys Chem Chem Phys 2022;24:15245-15254. [PMID: 35703101 DOI: 10.1039/d2cp01501c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
7
Yang J, Li Y, Qiu Q, Wang R, Yan W, Yu Y, Niu L, Pei H, Wei H, Ouyang L, Ye H, Xu D, Wei Y, Chen Q, Chen L. Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond. J Med Chem 2022;65:9159-9173. [PMID: 35762925 DOI: 10.1021/acs.jmedchem.2c00379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
8
Absorption wavelength along chromophore low-barrier hydrogen bonds. iScience 2022;25:104247. [PMID: 35521532 PMCID: PMC9062252 DOI: 10.1016/j.isci.2022.104247] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 03/18/2022] [Accepted: 04/07/2022] [Indexed: 11/22/2022]  Open
9
Jacobi R, Joerg F, Steinhauser O, Schröder C. Emulating proton transfer reactions in the pseudo-protic ionic liquid 1-methylimidazolium acetate. Phys Chem Chem Phys 2022;24:9277-9285. [PMID: 35403653 PMCID: PMC9020328 DOI: 10.1039/d2cp00643j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
10
Štoček JR, Socha O, Císařová I, Slanina T, Dračínský M. Importance of Nuclear Quantum Effects for Molecular Cocrystals with Short Hydrogen Bonds. J Am Chem Soc 2022;144:7111-7116. [PMID: 35394771 DOI: 10.1021/jacs.1c10885] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Kostin MA, Pylaeva S, Tolstoy P. Phosphine oxides as NMR and IR spectroscopic probes for geometry and energy of PO···H–A hydrogen bonds. Phys Chem Chem Phys 2022;24:7121-7133. [DOI: 10.1039/d1cp05939d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
12
Alkorta I, Elguero J. The SN2 reaction and its relationship with the Walden inversion, the Finkelstein and Menshutkin reactions together with theoretical calculations for the Finkelstein reaction. Struct Chem 2021. [DOI: 10.1007/s11224-021-01805-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
13
Giba IS, Mulloyarova VV, Denisov GS, Tolstoy PM. Sensitivity of 31 P NMR chemical shifts to hydrogen bond geometry and molecular conformation for complexes of phosphinic acids with pyridines. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021;59:465-477. [PMID: 33332667 DOI: 10.1002/mrc.5123] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 12/10/2020] [Accepted: 12/14/2020] [Indexed: 06/12/2023]
14
Raynal M, Li Y, Troufflard C, Przybylski C, Gontard G, Maistriaux T, Idé J, Lazzaroni R, Bouteiller L, Brocorens P. Experimental and computational diagnosis of the fluxional nature of a benzene-1,3,5-tricarboxamide-based hydrogen-bonded dimer. Phys Chem Chem Phys 2021;23:5207-5221. [PMID: 33625418 DOI: 10.1039/d0cp06128j] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
15
Dreier C, Prädel L, Ehrhard AA, Wagner M, Hunger J. Association Equilibria of Organo-Phosphoric Acids with Imines from a Combined Dielectric and Nuclear Magnetic Resonance Spectroscopy Approach. Anal Chem 2021;93:3914-3921. [PMID: 33600142 PMCID: PMC7931174 DOI: 10.1021/acs.analchem.0c04669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Accepted: 02/08/2021] [Indexed: 11/29/2022]
16
Notti A, Pisagatti I, Nastasi F, Patanè S, Parisi MF, Gattuso G. Stimuli-Responsive Internally Ion-Paired Supramolecular Polymer Based on a Bis-pillar[5]arene Dicarboxylic Acid Monomer. J Org Chem 2020;86:1676-1684. [PMID: 33369427 PMCID: PMC7871325 DOI: 10.1021/acs.joc.0c02501] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
17
Malm C, Prädel LA, Marekha BA, Grechko M, Hunger J. Composition-Dependent Hydrogen-Bonding Motifs and Dynamics in Brønsted Acid-Base Mixtures. J Phys Chem B 2020;124:7229-7238. [PMID: 32701282 PMCID: PMC7443859 DOI: 10.1021/acs.jpcb.0c04714] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
Kaczmarek-Kędziera A. Gas Phase Computational Study of Diclofenac Adsorption on Chitosan Materials. Molecules 2020;25:molecules25112549. [PMID: 32486148 PMCID: PMC7321203 DOI: 10.3390/molecules25112549] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 05/23/2020] [Accepted: 05/27/2020] [Indexed: 02/07/2023]  Open
19
Brehm M, Thomas M, Gehrke S, Kirchner B. TRAVIS—A free analyzer for trajectories from molecular simulation. J Chem Phys 2020;152:164105. [DOI: 10.1063/5.0005078] [Citation(s) in RCA: 164] [Impact Index Per Article: 41.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]  Open
20
Shenderovich IG, Denisov GS. Adduct under Field-A Qualitative Approach to Account for Solvent Effect on Hydrogen Bonding. Molecules 2020;25:molecules25030436. [PMID: 31973045 PMCID: PMC7037398 DOI: 10.3390/molecules25030436] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2020] [Revised: 01/17/2020] [Accepted: 01/20/2020] [Indexed: 02/08/2023]  Open
21
Crosslinking ionic oligomers as conformable precursors to calcium carbonate. Nature 2019;574:394-398. [PMID: 31619792 DOI: 10.1038/s41586-019-1645-x] [Citation(s) in RCA: 106] [Impact Index Per Article: 21.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2018] [Accepted: 08/01/2019] [Indexed: 11/08/2022]
22
Giba IS, Mulloyarova VV, Denisov GS, Tolstoy PM. Influence of Hydrogen Bonds in 1:1 Complexes of Phosphinic Acids with Substituted Pyridines on 1H and 31P NMR Chemical Shifts. J Phys Chem A 2019;123:2252-2260. [PMID: 30807160 DOI: 10.1021/acs.jpca.9b00625] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
23
Shenderovich IG. Simplified calculation approaches designed to reproduce the geometry of hydrogen bonds in molecular complexes in aprotic solvents. J Chem Phys 2018;148:124313. [PMID: 29604820 DOI: 10.1063/1.5011163] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
24
Xu HL, Li QZ, Scheiner S. Effect of Magnesium Bond on the Competition Between Hydrogen and Halogen Bonds and the Induction of Proton and Halogen Transfer. Chemphyschem 2018;19:1456-1464. [PMID: 29544030 DOI: 10.1002/cphc.201800102] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Indexed: 01/18/2023]
25
Zhang J, Wei Y, Li W, Cheng J, Li Q. Triel-hydride triel bond between ZX3 (Z = B and Al; X = H and Me) and THMe3 (T = Si, Ge and Sn). Appl Organomet Chem 2018. [DOI: 10.1002/aoc.4367] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
26
Van Hoozen BL, Petersen PB. Vibrational tug-of-war: The pKAdependence of the broad vibrational features of strongly hydrogen-bonded carboxylic acids. J Chem Phys 2018;148:134309. [PMID: 29626887 DOI: 10.1063/1.5026675] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
27
Levina E, Penkov NV, Rodionova NN, Tarasov SA, Barykina DV, Vener MV. Hydration of the Carboxylate Group in Anti-Inflammatory Drugs: ATR-IR and Computational Studies of Aqueous Solution of Sodium Diclofenac. ACS OMEGA 2018;3:302-313. [PMID: 30023777 PMCID: PMC6044930 DOI: 10.1021/acsomega.7b01034] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2017] [Accepted: 12/27/2017] [Indexed: 05/12/2023]
28
Malm C, Kim H, Wagner M, Hunger J. Complexity in Acid-Base Titrations: Multimer Formation Between Phosphoric Acids and Imines. Chemistry 2017;23:10853-10860. [PMID: 28597513 PMCID: PMC5582606 DOI: 10.1002/chem.201701576] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2017] [Indexed: 11/08/2022]
29
Pylaeva SA, Elgabarty H, Sebastiani D, Tolstoy PM. Symmetry and dynamics of FHF− anion in vacuum, in CD2Cl2 and in CCl4. Ab initio MD study of fluctuating solvent–solute hydrogen and halogen bonds. Phys Chem Chem Phys 2017;19:26107-26120. [DOI: 10.1039/c7cp04493c] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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