Small-Molecule Fluorescent Probes for Binding- and Activity-Based Sensing of Redox-Active Biological Metals

Although transition metals constitute less than 0.1% of the total mass within a human body, they have a substantial impact on fundamental biological processes across all kingdoms of life. Indeed, these nutrients play crucial roles in the physiological functions of enzymes, with the redox properties of many of these metals being essential to their activity. At the same time, imbalances in transition metal pools can be detrimental to health. Modern analytical techniques are helping to illuminate the workings of metal homeostasis at a molecular and atomic level, their spatial localization in real time, and the implications of metal dysregulation in disease pathogenesis. Fluorescence microscopy has proven to be one of the most promising non-invasive methods for studying metal pools in biological samples. The accuracy and sensitivity of bioimaging experiments are predominantly determined by the fluorescent metal-responsive sensor, highlighting the importance of rational probe design for such measurements. This review covers activity- and binding-based fluorescent metal sensors that have been applied to cellular studies. We focus on the essential redox-active metals: iron, copper, manganese, cobalt, chromium, and nickel. We aim to encourage further targeted efforts in developing innovative approaches to understanding the biological chemistry of redox-active metals.

A sensitive "turn-on" Schiff-base fluorescent probe for the selective detection of Fe3+ and bio-imaging

A novel Schiff-base fluorescent probe, 4-(N-(2- hydroxyl-1-naphthalymethylimino)-ethylamino) -7-nitro-1,2,3-benzoxadiazole (HENB) was synthesized and utilized for spectral sensing of Fe3+ ions at neutral pH. The binding of Fe3+ to HENB in C2H5OH-HEPES buffer (1:1 v/ v, 25 mM, pH 7.2) resulted in a pronounced emission enhancement at 530 nm, which is possibly due to the inhibition of photo-induced electron transfer (PET) process as well as the chelation enhanced fluorescence (CHEF) effect. HENB shows good selectivity and sensitivity toward Fe3+ with the detection limit as low as 4.51 nM. Test strips made of HENB was used for rapid "naked-eye" detection of Fe3+ ions in aqueous medium. Moreover, HENB was successfully applied in fluorescence imaging of exogenous and endogenous Fe3+ in live Hela cells as well as zebrafish. Importantly, HENB is capable of effectively monitoring the variations of Fe3+ in living cells during ferroptosis process.

Fluorescent probes for biomolecule detection under environmental stress

The use of fluorescent probes in visible detection has been developed over the last several decades. Biomolecules are essential in the biological processes of organisms, and their distribution and concentration are largely influenced by environmental factors. Significant advances have occurred in the applications of fluorescent probes for the detection of the dynamic localization and quantity of biomolecules during various environmental stress-induced physiological and pathological processes. Herein, we summarize representative examples of small molecule-based fluorescent probes that provide bimolecular information when the organism is under environmental stress. The discussion includes strategies for the design of smart small-molecule fluorescent probes, in addition to their applications in biomolecule imaging under environmental stresses, such as hypoxia, ischemia-reperfusion, hyperthermia/hypothermia, organic/inorganic chemical exposure, oxidative/reductive stress, high glucose stimulation, and drug treatment-induced toxicity. We believe that comprehensive insight into the beneficial applications of fluorescent probes in biomolecule detection under environmental stress should enable the further development and effective application of fluorescent probes in the biochemical and biomedical fields.

Synthesis of indenophenanthridine via a [4+2] annulation strategy: a “turn-off’’ Fe3+ ion sensor, practical application in live cell imaging and reversible acidochromism studies

An efficient protocol has been developed for the synthesis of a novel fluorescent probe, 1,2-disubstituted-indeno[1,2,3-gh]phenanthridine, derived from a series of α-oxo-ketene dithioacetals (OKDTAs) and indenoquinoline under essential conditions via a [4+2] annulation in excellent yield.

"Turn-on" fluorescent probes based on Rhodamine B/amino acid derivatives for detection of Fe3+ in water

Five kinds of Fe³⁺ fluorescent probes (RhB-Gly, RhB-Ala, RhB-Try, RhB-Cys, and RhB-His) were synthesized and characterized by NMR and mass spectrometry, based on the "OFF-ON" mechanism of Rhodamine B derivatives. The RhB-His based probe showed remarkable sensing performance toward the detection for Fe³⁺ and showed high selectivity for Fe³⁺ in the presence of other metal ions (such as Fe²⁺, Hg²⁺, Zn²⁺, Ba²⁺, Al³⁺, Co²⁺, Cd²⁺, K⁺, Na⁺, Mn²⁺, Pd²⁺, Pb²⁺, Ca²⁺, Ni²⁺, Cu²⁺, and Ag⁺), in PBS buffer solution (containing 2% of EtOH, pH 7.4, 1.0 mmol/L). The enhancement of the fluorescence was linearly proportional with the concentration Fe³⁺ (from 0 to 20 μmol/L), while the detection limit reached 0.88 μmol/L with a response time of 15 s. The RhB-His probe was successfully applied to investigate real samples and living cell imaging.

Two-Photon Dual-Emissive Carbon Dot-Based Probe: Deep-Tissue Imaging and Ultrasensitive Sensing of Intracellular Ferric Ions

Carbon dots (CDs)-based nanoparticles have been extensively explored for biological applications in sensing and bioimaging. However, the major translational barriers to CDs for imaging and sensing applications include synthetic strategies to obtain monodisperse CDs with tunable structural, electronic, and optical properties in order to achieve high-resolution deep-tissue imaging, intracellular detection, and sensing of metal ions with high sensitivity down to nanomolar levels. Herein, we report a novel strategy to synthesize and develop a multifunctional nitrogen-doped CDs probe of different sizes using a new combination of carbon and nitrogen sources. Our results show that the structural characteristics (i.e., the surface density of emissive traps and bandgaps levels) depend on the size of the CDs, which ultimately influences their optical properties. This work also demonstrates the development of a two-photon dual-emissive fluorescent multifunctional probes (3-FCDs) by conjugating fluorescein isothiocyanate on the surface of nitrogen-doped CDs. 3-FCDs show excellent near-infrared two-photon excitation ability, single-wavelength excitation, high photostability, biocompatibility, low cytotoxicity, and good cell permeability. Using two-photon fluorescence imaging, our multifunctional probe shows excellent deep-tissue high-resolution imaging capabilities with penetration depth up to 3000 and 280 μm in hydrogel scaffold and pigskin tissue, respectively. The designed probe exhibits ultrasensitivity and specificity toward Fe³⁺ ions with a remarkable detection limit of 2.21 nM using two-photon excitation. In addition, we also demonstrate the use of multifunctional CDs probe for ultrasensitive exogenous and real-time endogenous sensing of Fe³⁺ ions and imaging in live fibroblasts with rapid response times for intracellular ferric ion detection.

A novel "off-on" rhodamine-based colorimetric and fluorescent chemosensor based on hydrolysis driven by aqueous medium for the detection of Fe3

A novel "off-on" colorimetric and fluorescent chemosensor N²,N⁶-bis(2-(rhodamine B amido)ethyl)pyridine-2,6-dicarboxamide (RhBEP) has been designed and synthesized, which can selectively detect the presence of Fe³⁺ with about 75-fold enhancement in fluorescence emission intensity at 585 nm over various environmentally relevant metal cations such as Hg²⁺, Cu²⁺, Cr³⁺, Li⁺, Na⁺, K⁺, Ag⁺, Zn²⁺, Mg²⁺, Ca²⁺, Ba²⁺, Fe²⁺, Cd²⁺, Ni²⁺, Mn²⁺, Al³⁺, Bi³⁺ and Au³⁺ in PBS reaction media. The remarkable color change from UV-Vis titration experiments indicates that RhBEP can be used as a colorimetric chemosensor for Fe³⁺. The ultrasensitive detection limit for Fe³⁺ in the fluorescence measurement is down to 2.0 × 10^-8 mol·L^-1. The recognition mechanism of RhBEP to Fe³⁺ was analyzed by Job's plot and mass spectrometry analysis. In addition, the data from fluorescent cell imaging experiments confirmed that the chemosensor RhBEP has a promising application for the detection of Fe³⁺ in biological systems.

A turn-on Schiff base fluorescent probe for the exogenous and endogenous Fe3+ ion sensing and bioimaging of living cells

A Schiff base fluorescent probe, namely naphthalic anhydride – (2-pyridine) hydrazone (NAH), has been synthesized and developed for the highly selective and sensitive monitoring of Fe³⁺ ions in an aqueous solution and living cells.

Aqueous Phase Sensing of Fe3+ and Ascorbic Acid by a Metal-Organic Framework and Its Implication in the Construction of Multiple Logic Gates

A new Hf^IV -based metal-organic framework with UiO-66 topology was synthesized via a one-step solvothermal method by using 3-methyl-4-phenylthieno[2,3-b]thiophene-2,5-dicarboxylic acid (H₂ MPTDC) as a ligand. The MOF material showed a high stability in a broad pH range (from pH 2 to pH 12) in an aqueous medium. The presence of hydrophobic methyl and phenyl substituents in the carboxylic acid ligand and strong Hf-O bond play crucial roles in its stability. The new MOF material was systematically characterized by various techniques such as XRPD, N₂ sorption, thermogravimetric analyses and FT-IR spectroscopy. The photophysical properties of the MOF material were also examined by steady-state and time-resolved fluorescence studies. It was observed that the blue fluorescence of the MOF material was selectively quenched in the presence of Fe³⁺ ion in pure aqueous medium. A mechanistic study disclosed that quenching occurs via a strong inner filter effect (IFE) arising from Fe³⁺ ion in aqueous medium. Interestingly, the fluorescence of the MOF material can be recovered by elimination of the IFE of Fe³⁺ ion via reduction of Fe³⁺ ion by ascorbic acid (AA). Based on the fluorescence recovery by AA, a MOF based on-off-on probe was developed for the sensing of Fe³⁺ ion and AA in aqueous medium. Inspired by this reversible sensing event, we demonstrate basic (NOT, OR, YES, INHIBIT and IMP) and higher integrated logic operations utilizing this fluorescent MOF. This MOF-based logic systems could be potentially used for next-generation logic-gate based analytical applications as well as for the detection and discrimination of targeted molecules in various complex domains.

A coumarin-based fluorescent probe for monitoring labile ferrous iron in living systems

Labile Fe2+ has been considered to be a metabolically active and regulatory form of cellular iron. Monitoring the dynamic level of labile Fe2+ in biological systems is vital for evaluating the iron related biological processes and diseases as well as dissecting the exact physiological and pathophysiological functions of the labile Fe2+. Herein, we rationally constructed a coumarin-based fluorescent probe for sensing labile Fe2+ in living systems based on a novel Fe2+ meditated cyclization reaction strategy. The probe showed a highly selective and sensitive response to Fe2+, and the detection limit was determined to be 45 nM. Significantly, the probe displayed fast response to Fe2+, with the sensing reaction completed in 2 min, which is beneficial for real time sensing. The application of the probe for sensing different concentrations of labile Fe2+ in living cells has been conducted. In addition, the basal and endogenous levels of labile Fe2+ in living systems were also successfully monitored.

A Highly Selective "Turn-on" Fluorescent Probe for Detection of Fe3+ in Cells

A new "turn-on" fluorescent probe Py based on rhodamine and piperonaldehyde was designed and synthesized for detecting Fe³⁺ in cells. The free probe Py was non-fluorescent. While only upon addition of Fe³⁺, the significant increase of the fluorescence and color were observed which could be visible directly by "naked-eye". The probe Py shows high selectivity and sensitivity for Fe³⁺ over other common metal ions in EtOH-H₂O (3/2, v/v) mixed solution. The association constant and the detection limit were calculated to be 4.81 × 10⁴ M^-1 and 1.18 × 10^-8 mol/L respectively. The introduction of piperonaldehyde unit could increase probe rigidity which could enhance its optical properties. Meanwhile, the binding mode between Py and Fe³⁺ was found to be a 1:1 complex formation. The density functional theory (DFT) calculations were performed which would further confirm the recognition mechanism between probe Py and Fe³⁺. In addition, the probe has been proved to be reversible for detecting Fe³⁺. Moreover, the probe Py was used to detect Fe³⁺ in cells successfully.

Rutin-modified silver nanoparticles as a chromogenic probe for the selective detection of Fe3+ in aqueous medium

The use of rutin-modified silver nanoparticles for selective detection and sensitive quantification of Fe³⁺ in aqueous solution is described.

Novel rhodamine Schiff base type naked-eye fluorescent probe for sensing Fe3+ and the application in cell

Three rhodamine schiff-base type fluorescent sensors R1-R3 for detecting iron ion (Fe³⁺), 2-furanacrolein rhodamine hydrazone (R1), furfural rhodamine hydrazone (R2) and 2-furanacrolein rhodamine ethylenediamine (R3) have been synthesized by using rhodamine B derivatives and furan derivatives as staring materials. And their recognition abilities for Fe³⁺ were studied by fluorescence spectroscopy. The result showed that R1 is a best selective probe for Fe³⁺ over other metal ions in EtOH/H₂O (1:1, v/v) due to having 2-furanacrolein for unique space coordination structural. The recognition of Fe³⁺ and mechanism of the sensor were characterized and determined by fluorescence spectra and Fukui function. And the fluorescence intensity of the probe R1 for Fe³⁺ was proportional to its concentration with the linear correlation coefficient of 0.9965 and the binding constant of 7.66×10⁴M^-1. And the cell imaging experiment indicated a successful application of the probe R1 for Fe³⁺ in living cell.

Selective detection of inorganic phosphates in live cells based on a responsive fluorescence probe

A new activatable fluorescence probe has been designed and synthesized for inorganic phosphate detection in buffer and live cells.

A naphthalimide-based solid state luminescent probe for ratiometric detection of aluminum ions: in vitro and in vivo applications

A naphthalimide-based solid state luminescent probe has been designed and synthesized for the detection of Al³⁺ ions in solution as well as in the solid state with its versatile applications as materials and as a bio-imaging tool for the detection of Al³⁺ ions under in vitro and in vivo milieu.