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Number Cited by Other Article(s)
1
Song K, Li J. Fundamental Invariant Neural Network (FI-NN) Potential Energy Surface for the OH + CH3OH Reaction with Analytical Forces. J Phys Chem A 2024. [PMID: 39096277 DOI: 10.1021/acs.jpca.4c02432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/05/2024]
2
Zhang S, Makoś MZ, Jadrich RB, Kraka E, Barros K, Nebgen BT, Tretiak S, Isayev O, Lubbers N, Messerly RA, Smith JS. Exploring the frontiers of condensed-phase chemistry with a general reactive machine learning potential. Nat Chem 2024;16:727-734. [PMID: 38454071 PMCID: PMC11087274 DOI: 10.1038/s41557-023-01427-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Accepted: 12/12/2023] [Indexed: 03/09/2024]
3
Shanavas Rasheeda D, Martín Santa Daría A, Schröder B, Mátyus E, Behler J. High-dimensional neural network potentials for accurate vibrational frequencies: the formic acid dimer benchmark. Phys Chem Chem Phys 2022;24:29381-29392. [PMID: 36459127 DOI: 10.1039/d2cp03893e] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
4
Zhang Y, Lin Q, Jiang B. Atomistic neural network representations for chemical dynamics simulations of molecular, condensed phase, and interfacial systems: Efficiency, representability, and generalization. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2022. [DOI: 10.1002/wcms.1645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
5
Zhu X, Iyengar SS. Graph Theoretic Molecular Fragmentation for Multidimensional Potential Energy Surfaces Yield an Adaptive and General Transfer Machine Learning Protocol. J Chem Theory Comput 2022;18:5125-5144. [PMID: 35994592 DOI: 10.1021/acs.jctc.1c01241] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
6
Song K, Song H, Li J. Validating experiments for the reaction H2 + NH2- by dynamical calculations on an accurate full-dimensional potential energy surface. Phys Chem Chem Phys 2022;24:10160-10167. [PMID: 35420091 DOI: 10.1039/d2cp00870j] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
7
Győri T, Czako G. ManyHF: A pragmatic automated method of finding lower-energy Hartree−Fock solutions for potential energy surface development. J Chem Phys 2022;156:071101. [DOI: 10.1063/5.0080817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
8
Baiardi A, Grimmel SA, Steiner M, Türtscher PL, Unsleber JP, Weymuth T, Reiher M. Expansive Quantum Mechanical Exploration of Chemical Reaction Paths. Acc Chem Res 2022;55:35-43. [PMID: 34918903 DOI: 10.1021/acs.accounts.1c00472] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
9
Gerrits N. Accurate Simulations of the Reaction of H2 on a Curved Pt Crystal through Machine Learning. J Phys Chem Lett 2021;12:12157-12164. [PMID: 34918518 PMCID: PMC8724818 DOI: 10.1021/acs.jpclett.1c03395] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Accepted: 12/14/2021] [Indexed: 06/14/2023]
10
Li Y, Liu J, Li J, Zhai Y, Yang J, Qu Z, Li H. A new permutation-symmetry-adapted machine learning diabatization procedure and its application in MgH2 system. J Chem Phys 2021;155:214102. [PMID: 34879675 DOI: 10.1063/5.0072004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
11
Rice PS, Liu ZP, Hu P. Hydrogen Coupling on Platinum Using Artificial Neural Network Potentials and DFT. J Phys Chem Lett 2021;12:10637-10645. [PMID: 34704763 DOI: 10.1021/acs.jpclett.1c02998] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
12
Keith JA, Vassilev-Galindo V, Cheng B, Chmiela S, Gastegger M, Müller KR, Tkatchenko A. Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems. Chem Rev 2021;121:9816-9872. [PMID: 34232033 PMCID: PMC8391798 DOI: 10.1021/acs.chemrev.1c00107] [Citation(s) in RCA: 190] [Impact Index Per Article: 63.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Indexed: 12/23/2022]
13
Friederich P, Häse F, Proppe J, Aspuru-Guzik A. Machine-learned potentials for next-generation matter simulations. NATURE MATERIALS 2021;20:750-761. [PMID: 34045696 DOI: 10.1038/s41563-020-0777-6] [Citation(s) in RCA: 112] [Impact Index Per Article: 37.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Accepted: 07/17/2020] [Indexed: 05/18/2023]
14
Kroes GJ. Computational approaches to dissociative chemisorption on metals: towards chemical accuracy. Phys Chem Chem Phys 2021;23:8962-9048. [PMID: 33885053 DOI: 10.1039/d1cp00044f] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
15
Böselt L, Thürlemann M, Riniker S. Machine Learning in QM/MM Molecular Dynamics Simulations of Condensed-Phase Systems. J Chem Theory Comput 2021;17:2641-2658. [PMID: 33818085 DOI: 10.1021/acs.jctc.0c01112] [Citation(s) in RCA: 57] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
16
Behler J. Four Generations of High-Dimensional Neural Network Potentials. Chem Rev 2021;121:10037-10072. [DOI: 10.1021/acs.chemrev.0c00868] [Citation(s) in RCA: 106] [Impact Index Per Article: 35.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
17
Rivero Santamaría A, Ramos M, Alducin M, Busnengo HF, Díez Muiño R, Juaristi JI. High-Dimensional Atomistic Neural Network Potential to Study the Alignment-Resolved O2 Scattering from Highly Oriented Pyrolytic Graphite. J Phys Chem A 2021;125:2588-2600. [PMID: 33734696 DOI: 10.1021/acs.jpca.1c00835] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
18
Li J, Li J. A Full-Dimensional Potential Energy Surface and Dynamics of the Multichannel Reaction between H and HO2. J Phys Chem A 2021;125:1540-1552. [PMID: 33591185 DOI: 10.1021/acs.jpca.0c11213] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
19
Qu C, Conte R, Houston PL, Bowman JM. Full-dimensional potential energy surface for acetylacetone and tunneling splittings. Phys Chem Chem Phys 2021;23:7758-7767. [DOI: 10.1039/d0cp04221h] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
20
Zhang Y, Hu C, Jiang B. Accelerating atomistic simulations with piecewise machine-learned ab Initio potentials at a classical force field-like cost. Phys Chem Chem Phys 2021;23:1815-1821. [DOI: 10.1039/d0cp05089j] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
21
Manzhos S, Carrington T. Neural Network Potential Energy Surfaces for Small Molecules and Reactions. Chem Rev 2020;121:10187-10217. [PMID: 33021368 DOI: 10.1021/acs.chemrev.0c00665] [Citation(s) in RCA: 110] [Impact Index Per Article: 27.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
22
Käser S, Koner D, Christensen AS, von Lilienfeld OA, Meuwly M. Machine Learning Models of Vibrating H2CO: Comparing Reproducing Kernels, FCHL, and PhysNet. J Phys Chem A 2020;124:8853-8865. [DOI: 10.1021/acs.jpca.0c05979] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
23
Nejad A, Crittenden DL. On the separability of large-amplitude motions in anharmonic frequency calculations. Phys Chem Chem Phys 2020;22:20588-20601. [PMID: 32966420 DOI: 10.1039/d0cp03515g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
24
Jiang B, Li J, Guo H. High-Fidelity Potential Energy Surfaces for Gas-Phase and Gas-Surface Scattering Processes from Machine Learning. J Phys Chem Lett 2020;11:5120-5131. [PMID: 32517472 DOI: 10.1021/acs.jpclett.0c00989] [Citation(s) in RCA: 105] [Impact Index Per Article: 26.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
25
Lu D, Behler J, Li J. Accurate Global Potential Energy Surfaces for the H + CH3OH Reaction by Neural Network Fitting with Permutation Invariance. J Phys Chem A 2020;124:5737-5745. [DOI: 10.1021/acs.jpca.0c04182] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
26
Conte R, Qu C, Houston PL, Bowman JM. Efficient Generation of Permutationally Invariant Potential Energy Surfaces for Large Molecules. J Chem Theory Comput 2020;16:3264-3272. [PMID: 32212729 PMCID: PMC7997398 DOI: 10.1021/acs.jctc.0c00001] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
27
Chen X, Goldsmith CF. Accelerating Variational Transition State Theory via Artificial Neural Networks. J Phys Chem A 2020;124:1038-1046. [DOI: 10.1021/acs.jpca.9b11507] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
28
Liu Y, Li J. An accurate potential energy surface and ring polymer molecular dynamics study of the Cl + CH4→ HCl + CH3reaction. Phys Chem Chem Phys 2020;22:344-353. [DOI: 10.1039/c9cp05693a] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
29
Vincent MA, Silva AF, Popelier PLA. Atomic Partitioning of the MPn (n = 2, 3, 4) Dynamic Electron Correlation Energy by the Interacting Quantum Atoms Method: A Fast and Accurate Electrostatic Potential Integral Approach. J Comput Chem 2019;40:2793-2800. [PMID: 31373709 PMCID: PMC6900022 DOI: 10.1002/jcc.26037] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Revised: 07/10/2019] [Accepted: 07/11/2019] [Indexed: 11/13/2022]
30
Nandi A, Qu C, Bowman JM. Full and fragmented permutationally invariant polynomial potential energy surfaces for trans and cis N-methyl acetamide and isomerization saddle points. J Chem Phys 2019;151:084306. [DOI: 10.1063/1.5119348] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
31
Qin J, Liu Y, Lu D, Li J. Theoretical Study for the Ground Electronic State of the Reaction OH + SO → H + SO2. J Phys Chem A 2019;123:7218-7227. [DOI: 10.1021/acs.jpca.9b05776] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
32
Abbott AS, Turney JM, Zhang B, Smith DGA, Altarawy D, Schaefer HF. PES-Learn: An Open-Source Software Package for the Automated Generation of Machine Learning Models of Molecular Potential Energy Surfaces. J Chem Theory Comput 2019;15:4386-4398. [DOI: 10.1021/acs.jctc.9b00312] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
33
Liu Y, Bai M, Song H, Xie D, Li J. Anomalous kinetics of the reaction between OH and HO2on an accurate triplet state potential energy surface. Phys Chem Chem Phys 2019;21:12667-12675. [DOI: 10.1039/c9cp01553a] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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