Ultrasensitive CRISPR/Cas13a-Mediated Photoelectrochemical Biosensors for Specific and Direct Assay of miRNA-21

Sensitive and specific assay of microRNAs (miRNAs) is beneficial to early disease screening. Herein, we for the first time proposed clustered regularly interspaced short palindromic repeats (CRISPR)/Cas13a-mediated photoelectrochemical biosensors for the direct assay of miRNA-21. In this study, compared with traditional nucleic acid-based signal amplification strategies, the CRISPR/Cas13a system can greatly improve the specificity and sensitivity of target determination due to its accurate recognition and high-efficient trans-cleavage capability without complex nucleic acid sequence design. Moreover, compared with the CRISPR/Cas12a-based biosensing platform, the developed CRISPR/Cas13a-mediated biosensor can directly detect RNA targets without signal transduction from RNA to DNA, thereby avoiding signal leakage and distortion. Generally, the proposed biosensor reveals excellent analysis capability with a wider linear range from 1 fM to 5 nM and a lower detection limit of 1 fM. Additionally, it also shows satisfactory stability in the detection of human serum samples and cell lysates, manifesting that it has great application prospects in the areas of early disease diagnosis and biomedical research.

Hierarchical microtubes constructed using Fe-doped MoS2 nanosheets for biosensing applications

The structural design of multiple functional components could enhance the synergistic catalytic performance of MoS₂-based composites in enzyme-like catalysis. Herein, one-dimensional (1D) Fe-MoS₂ microtubes were designed to prepare tubular Fe-doped MoS₂ composites with MoO₃ microrods as self-sacrificing precursors. Remarkably, the results indicated that the generated ammonia released from the sulfidation process led to the dissolution of MoO₃ cores and the generation of a tubular structure. The Fe-MoS₂ composites integrated the synergistic effects of Fe-doped MoS₂ nanosheets (NSs) and the 1D tubular structure. Thus, a higher catalytic activity was observed in peroxidase-like catalysis than in other components, such as MoO₃@FeOOH, FeOOH and MoS₂ NSs. The peroxidase-like mechanism originated from the generation of the ˙OH radical. The Fe-MoS₂ microtube-based colorimetric assay was used to detect H₂O₂ with a detection limit (LOD) of 0.51 μM in a linear range from 1.25 to 50 μM. The colorimetric method was simple, selective, and sensitive for glutathione (GSH) detection in the range of 0.25-125 μM with a detection limit (LOD) of 0.12 μM. Thus, we provide a facile synthetic strategy for simultaneously integrating electronic modulation and structural design to develop an efficient MoS₂-based functional catalyst.

Synthesis of biocompatible chitosan functionalized Ag decorated biocomposite for effective antibacterial and anticancer activity

The transition-metal dichalcogenides (TMDCs) like MoS₂ and WS₂ are a new and interesting class of materials and show considerable promise for use in a wide variety of fields, including nanomedicine for cancer. The eco-friendly, biodegradability, toxicity, and antimicrobial activity remain an open issue. Herein, we focused on the current demands of two dimensional (2D) TMDCs and produced high-quality, few-layered MoS₂ nanosheets. Noble metal Ag incorporated into the 2D-CS/MoS₂ NC by the liquid exfoliated process. The manufactured CS/MoS₂/Ag hybrid NC showed excellent antibacterial activity against two microorganisms such as Gram-positive (21, 27, and 33 mm) and Gram-negative bacteria (23, 30, and 39 mm). The CS/MoS_2/Ag hybrid NC was designed to have significant antibacterial activity against E.coli bacteria than S.aureus. Furthermore, the hybrid NC has a 74.18% cell inhibition against MCF-7 cancer cells. According to the literature relevant, it is the first extensive experimental analysis on the nano-bio interaction of 2D TMDCs nanomaterials in MCF-7 breast cancer cells.

Role of Substrate in Au Nanoparticle Decoration by Electroless Deposition

Decoration of nanostructures is a promising way of improving performances of nanomaterials. In particular, decoration with Au nanoparticles is considerably efficient in sensing and catalysis applications. Here, the mechanism of decoration with Au nanoparticles by means of low-cost electroless deposition (ELD) is investigated on different substrates, demonstrating largely different outcomes. ELD solution with Au potassium cyanide and sodium hypophosphite, at constant temperature (80 °C) and pH (7.5), is used to decorate by immersion metal (Ni) or semiconductor (Si, NiO) substrates, as well as NiO nanowalls. All substrates were pre-treated with a hydrazine hydrate bath. Scanning electron microscopy and Rutherford backscattering spectrometry were used to quantitatively analyze the amount, shape and size of deposited Au. Au nanoparticle decoration by ELD is greatly affected by the substrates, leading to a fast film deposition onto metallic substrate, or to a slow cluster (50–200 nm sized) formation on semiconducting substrate. Size and density of resulting Au clusters strongly depend on substrate material and morphology. Au ELD is shown to proceed through a galvanic displacement on Ni substrate, and it can be modeled with a local cell mechanism widely affected by the substrate conductivity at surface. These data are presented and discussed, allowing for cheap and reproducible Au nanoparticle decoration on several substrates.

Electrochemical DNA Sensors Based on MoS2-AuNPs for Polynucleotide Kinase Activity and Inhibition Assay

The determination of T4 polynucleotide kinase (PNK) activity and the screening of PNK inhibitors are critical to disease diagnosis and drug discovery. Numerous electrochemical strategies have been developed for the sensitive measurement of PNK activity and inhibition. However, they often suffer from additional labels and multiple steps of the detection process for the electrochemical readout. Herein, we have demonstrated an electrochemical DNA (E-DNA) sensor for the one-step detection of PNK with "signal-on" readout with no need for additional labels. In our design, the highly switchable double-stranded DNA (dsDNA) probes are immobilized on the gold nanoparticle-decorated molybdenum disulfide nanomaterial (MoS₂-AuNPs), which possesses large surface area and high conductivity for elevating the signal gain in the PNK detection. This signal-on E-DNA sensor integrated with MoS₂-AuNPs exhibits a much higher sensitivity than that without MoS₂-AuNPs, showing a detection limit of 2.18 × 10^-4 U/mL. Furthermore, this assay shows high selectivity, with the ability to discriminate PNK from other enzymes and proteins, and can be utilized to screen inhibitors. The proposed sensor is easy to operate with one-step readout and robust for PNK detection in the biological matrix and shows great potential for point-of-care in clinical diagnostics and drug screening.

Class-selective voltammetric determination of hydroxycinnamic acids structural analogs using a WS2/catechin-capped AuNPs/carbon black-based nanocomposite sensor

A high-performance screen-printed electrode (SPE) based nanocomposite sensor integrating tungsten disulfide (WS₂) flakes decorated with catechin-capped gold nanoparticles (AuNP-CT) and carbon black (CB) has been developed. The excellent antifouling properties of WS₂ decorated with AuNP-CT into a high conductivity network of CB results in high selectivity, sensitivity, and reproducibility for the simultaneous determination of hydroxycinnamic acid (hCN) structural analogs: caffeic (CF), sinapic (SP), and p-coumaric acids (CM). Using differential pulse voltammetry (DPV), the target hCNs resulted in three well-resolved oxidation peaks at SPE-CB-WS₂/AuNP-CT sensor. Excellent antifouling performance (RSD i_p,a ≤ 3%, n = 15 for three analytes' simultaneous measure) and low detection limits (CF 0.10 μmol L^-1; SP, 0.40 μmol L^-1; CM, 0.40 μmol L^-1) are obtained despite the analyzed compounds having a high passivation tendency towards carbon-based sensors. The SPE-CB-WS₂/AuNP-CT sensor was successfully applied to determine CF, SP, and CM in food samples with good precision (RSD ≤ 4%, n = 3) and recoveries (86-109%; RSD ≤ 5%, n = 3). The proposed sensor is the first example exploiting the simultaneous determination of these compounds in food samples. Given its excellent electrochemical performance, low cost, disposability, and ease of use, this SPE-CB-WS₂/AuNP-CT nanocomposite sensor represents a powerful candidate for the realization of electrochemical devices for the determination of (bio)compounds with high passivation tendency. Graphical abstract.

Synthesis of biogenic chitosan-functionalized 2D layered MoS2 hybrid nanocomposite and its performance in pharmaceutical applications: In-vitro antibacterial and anticancer activity

A bacterial and viral infection causes life threatening diseases owing to the abuse of antibiotics and the development of antibiotic resistance microbes. Currently, biopolymers have been considered as the most promising materials in the medical field. Herein, the biogenic chitosan-functionalized MoS₂ nanocomposite was prepared by the hydrothermal method with the liquid exfoliation process. The X-ray diffraction (XRD) results of chitosan-MoS₂ hybrid nanocomposite revealed that MoS₂ nanoparticle was found to be 42 nm with a hexagonal crystal structure. FTIR and Raman spectrum revealed that the nitrogen functionalities in the chitosan interacted with MoS₂ to form the nanocomposite. The XPS spectrum of chitosan-MoS₂ nanocomposite confirms that C, N, O, Mo, and S exist in the nanocomposite. Thermal gravimetric analysis (TGA) and Differential thermal analysis (DTA) analysis showed that the chitosan-MoS₂ nanocomposite has higher thermal stability up to 600 °C. In the antibacterial application the chitosan-MoS₂ hybrid nanocomposite shows zones of inhibition against S. aureus as 22, 28, and 32 mm, and against E. coli as 26, 30, and 35 mm. In the anticancer analysis, chitosan-MoS₂ hybrid nanocomposites showed a maximum cell inhibition of 65.45% at 100 μg/mL^-1, resulting in the most significant MCF-7 cell inhibition.

Cu2+-Modified Boron Nitride Nanosheets-Supported Subnanometer Gold Nanoparticles: An Oxidase-Mimicking Nanoenzyme with Unexpected Oxidation Properties

In recent years, inorganic biomimetic nanozymes that mimic the activity of natural biological enzymes have attracted extensive research interest, and some mimic enzymes have been successfully applied in the fields of biosensing, catalysis, and oncotherapy. Herein, we report the preparation and mechanism study of a novel nanocomposite, Cu²⁺-modified hexagonal boron nitride nanosheets-supported subnanometer gold nanoparticles (Au NPs/Cu²⁺-BNNS). Interestingly, our investigation reveals that Cu²⁺-BNNS exhibits strong peroxidase mimetic nanoenzyme activity, while Au NPs/Cu²⁺-BNNS exhibits excellent oxidase-like activity, that is, it can catalyze the oxidation reaction of the substrate in the absence of an oxidant such as H₂O₂. For example, Au NPs/Cu²⁺-BNNS can efficiently and selectively oxidize 3,3',5,5'-tetramethylbenzidine (TMB) and 3,3'-dimethylbiphenyl-4,4'-diamine (OT) coloration without the presence of horseradish peroxidase (HRP) and H₂O₂. It is worthy to note that AuNPs/Cu²⁺-BNNS-induced TMB coloration only takes 4 min to reach the platform, while the conventional HRP-H₂O₂ system takes more than 30 min to reach the platform. Further mechanism study shows that the zeta potential, oxidation potential, and steric hindrance of the oxidative chromogenic substrate determine the selectivity of oxidation coloration, while the oxidase-like properties of Au NPs/Cu²⁺-BNNS are derived from reactive oxygen species generated by the adsorbed oxygen, and Cu²⁺ ion can synergistically promote the oxidation process. Compared with conventional biological enzymes, Au NPs/Cu²⁺-BNNS has the advantages of being HRP free and H₂O₂ free, having high efficiency, low cost, and good stability, and is successfully demonstrated for the detection of carcinoembryonic antigen (a universal cancer biomarker) and H₂S (the third gaseous signal molecule).

Intracellular MicroRNA Imaging with MoS2-Supported Nonenzymatic Catassembly of DNA Hairpins

Amplification strategies for low-level microRNA detection in living cells are pivotal for gene diagnosis and many cellular bioprocesses. In this work, we develop an amplification strategy for microRNA-21 (miRNA-21) imaging in living cells with MoS₂-supported catassembly of DNA hairpins. The MoS₂ nanosheet with low cytotoxicity serves as the nanocarrier and excellent fluorescence quencher, which can transfer fluorescent metastable hairpin DNA into the cells easily in a nondestructive manner and significantly reduce background signals. The three-branched catalyzed hairpin assembly (TB-CHA) probes contain three types of designed DNA molecular beacons with the modification of Cy3 in the terminal. In the presence of miRNA-21, the catalyzed hairpin assembly (CHA) reaction would be triggered and a "Y"-shaped three-branched duplex nanostructure would be formed, which would release from the surface of the MoS₂ nanosheet due to the reduced affinity between the DNA duplex and MoS₂ nanosheet. The multisite fluorescence modification and the circular reaction of TB-CHA probes allowed a significant fluorescence recovery in a live-cell microenvironment. The ultrasensitive detection of miRNA-21 is achieved with a detection limit of 75.6 aM, which is ∼5 orders of magnitude lower than that of a simple strand displacement-based strategy (detection limit: 8.5 pM). This method offers great opportunities for the ultrasensitive live-cell detection of miRNAs and helps in gaining a deeper understanding of the physiological functions of miRNAs in cancer research and life processes.

A highly sensitive electrochemical aptasensor for detection of microcystin-LR based on a dual signal amplification strategy

In this work, a sensitive and selective electrochemical aptasensor for determination of microcystin-LR (MC-LR) was developed based on a dual signal amplification system consisting of a novel ternary composite and horseradish peroxidase (HRP). The ternary composite was prepared by depositing gold nanoparticles (AuNPs) on molybdenum disulfide (MoS2) covered TiO2 nanobeads (TiONBs). MoS2 nanosheet modified TiONBs provided a large surface area for immobilization of AuNPs and biomolecules. The ternary composite also possesses an improved electron transfer and catalytic capability. To construct the aptasensor, thiolated MC-LR aptamers were immobilized on the AuNP@MoS2-TiONB modified electrode through a gold-sulfur bond. Then, biotin-cDNA with a sequence complementary to the MC-LR aptamer competed with MC-LR for binding to the immobilized aptamer. The current signal catalyzed by avidin-HRP decreased with the increase of MC-LR, based on which a linear range of 0.005-30 nM and a detection limit of 0.002 nM were obtained.

Sensitive colorimetric sensor for point-of-care detection of acetylcholinesterase using cobalt oxyhydroxide nanoflakes

Point-of-care monitoring of acetylcholinesterase (AChE) is of significant importance for pesticide poisoning and disease diagnosis because it plays a pivotal role in biological nerve conduction systems. Herein, we designed a colorimetric strategy for the facile and accurate detection of AChE based on tandem catalysis with a multi-enzyme system, which is constituted by cobalt oxyhydroxide nanoflakes (CoOOH NFs) and choline oxidase (CHO). In this sensor, AChE catalytically hydrolyzed acetylcholine (ACh) to produce choline, which was further efficiently oxidized by CHO to yield H₂O₂. CoOOH NFs, as a nanozyme, efficiently catalyzed 3,3',5,5'-tetramethylbenzidine (TMB) into blue oxTMB with the help of H₂O₂, accompanied by an enhancement of absorbance intensity. The resulting intensity could be employed as the signal output of the CHO/CoOOH/ACh system in monitoring AChE. Under optimal conditions, the developed sensor possessed a sensitive response to AChE with a detection limit of 33 μU mL^-1. Interestingly, the proposed platform was applied to fabricate a paper-based sensor for rapidly recognizing AChE by direct observation with the naked eyes. Combined with a smartphone and ImageJ software, we further developed an image-processing algorithm for the quantitative detection of AChE with highly promising results, which validated the outstanding potential of on-site application in clinical diagnostics and pesticide poisoning.