Targeting Acr3 from Ensifer medicae to the plasma membrane or to the tonoplast of tobacco hairy roots allows arsenic extrusion or improved accumulation. Effect of acr3 expression on the root transcriptome

Arsenic transport, detoxification, and recent technologies for mitigation: A systemic review

Arsenic (As) is an acute toxic metalloid that affects plant growth and development. As is found in the environment in organic and inorganic forms, but arsenite As(III) and arsenate As(V) are the most prevalent forms that negatively impact the plants. Roots exposed to As can easily absorb it mainly through transporters that carry vital mineral nutrients. As reach the food chain via crops irrigated with As-polluted water and exerts a negative impact. Even at low levels, As exposure disrupts the regular functioning of plants by generating a high level of reactive oxygen species (ROS) results into oxidative damage, and disruption of redox system. Plants have built-in defence mechanisms to combat this oxidative damage. The development of a food crop with lower As levels is dependent upon understanding the molecular process of As detoxification in plants, which will help reduce the consumption of As-contaminated food. Numerous genes in plants that may provide tolerance under hazardous conditions have been examined using genetic engineering techniques. The suppression of genes by RNA interference (RNAi) and CRISPR-Cas 9 (CRISPR associated protein 9) technology revealed an intriguing approach for developing a crop that has minimal As levels in consumable portions. This study aims to present current information on the biochemical and molecular networks associated with As uptake, as well as recent advances in the field of As mitigation using exogenous salicylic acid (SA), Serendipita indica and biotechnological tools in terms of generating As-tolerant plants with low As accumulation.

From genes to ecosystems: Decoding plant tolerance mechanisms to arsenic stress

Arsenic (As), a metalloid of considerable toxicity, has become increasingly bioavailable through anthropogenic activities, raising As contamination levels in groundwater and agricultural soils worldwide. This bioavailability has profound implications for plant biology and farming systems. As can detrimentally affect crop yield and pose risks of bioaccumulation and subsequent entry into the food chain. Upon exposure to As, plants initiate a multifaceted molecular response involving crucial signaling pathways, such as those mediated by calcium, mitogen-activated protein kinases, and various phytohormones (e.g., auxin, methyl jasmonate, cytokinin). These pathways, in turn, activate enzymes within the antioxidant system, which combat the reactive oxygen/nitrogen species (ROS and RNS) generated by As-induced stress. Plants exhibit a sophisticated genomic response to As, involving the upregulation of genes associated with uptake, chelation, and sequestration. Specific gene families, such as those coding for aquaglyceroporins and ABC transporters, are key in mediating As uptake and translocation within plant tissues. Moreover, we explore the gene regulatory networks that orchestrate the synthesis of phytochelatins and metallothioneins, which are crucial for As chelation and detoxification. Transcription factors, particularly those belonging to the MYB, NAC, and WRKY families, emerge as central regulators in activating As-responsive genes. On a post-translational level, we examine how ubiquitination pathways modulate the stability and function of proteins involved in As metabolism. By integrating omics findings, this review provides a comprehensive overview of the complex genomic landscape that defines plant responses to As. Knowledge gained from these genomic and epigenetic insights is pivotal for developing biotechnological strategies to enhance crop As tolerance.

Research advances in mechanisms of arsenic hyperaccumulation of Pteris vittata: Perspectives from plant physiology, molecular biology, and phylogeny

Pteris vittata, as the firstly discovered arsenic (As) hyperaccumulator, has great application value in As-contaminated soil remediation. Currently, the genes involved in As hyperaccumulation in P. vittata have been mined continuously, while they have not been used in practice to enhance phytoremediation efficiency. Aiming to better assist the practice of phytoremediation, this review collects 130 studies to clarify the progress in research into the As hyperaccumulation process in P. vittata from multiple perspectives. Antioxidant defense, rhizosphere activities, vacuolar sequestration, and As efflux are important physiological activities involved in As hyperaccumulation in P. vittata. Among related 19 genes, PHT, TIP, ACR3, ACR2 and HAC family genes play essential roles in arsenate (AsⅤ) transport, arsenite (AsⅢ) transport, vacuole sequestration of AsⅢ, and the reduction of AsⅤ to AsⅢ, respectively. Gene ontology enrichment analysis indicated it is necessary to further explore genes that can bind to related ions, with transport activity, or with function of transmembrane transport. Phylogeny analysis results implied ACR2, HAC and ACR3 family genes with rapid evolutionary rate may be the decisive factors for P. vittata as an As hyperaccumulator. A deeper understanding of the As hyperaccumulation network and key gene components could provide useful tools for further bio-engineered phytoremediation.

Adsorption Characteristics of Indigenous Chromium-Resistant Aspergillus niger Strain Isolated from Red Soil for Remediation of Toxic Chromium in Red Soil Environments

The microbial treatment of soil has great potential to reduce chromium pollution. Here, an indigenous chromium-resistant Aspergillus niger strain (A1) was isolated and screened from heavily chromium-contaminated red soil in Yunnan Province, China using a traditional isolation method and a selective culture experiment. The molecular identification of A1 was achieved using 18S rRNA sequencing. The tolerance of the strain to toxic chromium was evaluated through pure laboratory culture. The adsorption effect and mechanism of A1 on chromium in red soil were further studied. The study concluded that A1 exhibited strong activity with exposure to 500 mg·L^-1 Cr⁶⁺. Chromium adsorption by A. niger occurred mainly through intracellular metabolism, surface complexations with EPS, and chemical reduction with -C=C-, -OXuH, NH₂, and -C=0. The optimized results showed that A1 had the best Cr⁶⁺ removal effect at pH 4, 40 °C, and a 60 h culture time. Compared with the inoculating of exogenous microbial agents, after inoculating A1 into the chromium-contaminated red soil, Cr⁶⁺ content was significantly reduced, and the high-toxicity chromium state (water-soluble and exchange states) decreased, whereas the low-toxicity chromium state (precipitation and residue states) increased. The results of red soil ITS also showed that the inoculation of indigenous microorganisms can better colonize the red soil. This study proves the feasibility of the application of indigenous A. niger to address red soil chromium pollution and provides a new idea and theoretical support for red soil remediation.

Aquaporin-mediated transport: Insights into metalloid trafficking

Metalloids in plants have diverse physiological effects. From being essential to beneficial to toxic, they have significant effects on many physiological processes, influencing crop yield and quality. Aquaporins are a group of membrane channels that have several physiological substrates along with water. Metalloids have emerged as one of their important substrates and they are found to have a substantial role in regulating plant metalloid homeostasis. The present review comprehensively details the multiple isoforms of aquaporins having specificity for metalloids and being responsible for their influx, distribution or efflux. In addition, it also highlights the usage of aquaporin-mediated transport as a selection marker in toxic screens and as tracer elements for closely related metalloids. Therefore, aquaporins, with their imperative contribution to the regulation of plant growth, development and physiological processes, need more research to unravel the metalloid trafficking mechanisms and their future applications.

Novel PvACR3;2 and PvACR3;3 genes from arsenic-hyperaccumulator Pteris vittata and their roles in manipulating plant arsenic accumulation

Arsenite (AsIII) antiporter ACR3 is crucial for arsenic (As) translocation and sequestration in As-hyperaccumulator Pteris vittata, which has potential for phytoremediation of As-contaminated soils. In this study, two new ACR3 genes PvACR3;2 and PvACR3;3 were cloned from P. vittata and studied in model organism yeast (Saccharomyces cerevisiae) and model plant tobacco (Nicotiana tabacum). Both ACR3s mediated AsIII efflux in yeast, decreasing its As accumulation and enhancing its As tolerance. In addition, PvACR3;2 and PvACR3;3 were expressed in tobacco plant. Localized on the plasma membrane, PvACR3;2 mediated both AsIII translocation to the shoots and AsIII efflux from the roots in tobacco, resulting in 203 - 258% increase in shoot As after exposing to 5 μM AsIII under hydroponics. In comparison, localized to the vacuolar membrane, PvACR3;3 sequestrated AsIII in tobacco root vacuoles, leading to 18 - 20% higher As in the roots and 15 - 36% lower As in the shoots. Further, based on qRT-PCR, both genes were mainly expressed in P. vittata fronds, indicating PvACR3;2 and PvACR3;3 may play roles in AsIII translocation and sequestration in the fronds. This study provides not only new insights into the functions of new ACR3 genes in P. vittata, but also important gene resources for manipulating As accumulation in plants for phytoremediation and food safety.

Molecular Biology in the Improvement of Biological Nitrogen Fixation by Rhizobia and Extending the Scope to Cereals

The contribution of biological nitrogen fixation to the total N requirement of food and feed crops diminished in importance with the advent of synthetic N fertilizers, which fueled the “green revolution”. Despite being environmentally unfriendly, the synthetic versions gained prominence primarily due to their low cost, and the fact that most important staple crops never evolved symbiotic associations with bacteria. In the recent past, advances in our knowledge of symbiosis and nitrogen fixation and the development and application of recombinant DNA technology have created opportunities that could help increase the share of symbiotically-driven nitrogen in global consumption. With the availability of molecular biology tools, rapid improvements in symbiotic characteristics of rhizobial strains became possible. Further, the technology allowed probing the possibility of establishing a symbiotic dialogue between rhizobia and cereals. Because the evolutionary process did not forge a symbiotic relationship with the latter, the potential of molecular manipulations has been tested to incorporate a functional mechanism of nitrogen reduction independent of microbes. In this review, we discuss various strategies applied to improve rhizobial strains for higher nitrogen fixation efficiency, more competitiveness and enhanced fitness under unfavorable environments. The challenges and progress made towards nitrogen self-sufficiency of cereals are also reviewed. An approach to integrate the genetically modified elite rhizobia strains in crop production systems is highlighted.