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Takamura H, Hattori K, Ohashi T, Otsu T, Kadota I. Relative stereochemical determination of the C61-C83 fragment of symbiodinolide using a stereodivergent synthetic approach. Org Biomol Chem 2023; 21:8837-8848. [PMID: 37791452 DOI: 10.1039/d3ob01420g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
Abstract
Structural determination is required in the use of marine natural products to create novel drugs and drug leads in medicinal chemistry. Symbiodinolide, which is a polyol marine natural product with a molecular weight of 2860, increases the intracellular Ca2+ concentration and exhibits inhibitory activity against cyclooxygenase-1. Seventy percent of the structure of symbiodinolide has been stereochemically clarified. Herein, we report the elucidation of the relative configuration of the C61-C83 fragment, which is among the remaining thirty percent, using a stereodivergent synthetic strategy. We first assigned the relative configuration of the C61-C74 fragment. Two candidate diastereomers of the C61-C74 fragment were synthesized, and their NMR data were compared with those of the natural product, revealing the relative stereochemistry of this component. We then narrowed down the candidate compounds for the C69-C83 fragment from 16 possible diastereomers by analyzing the NMR data of the natural product, and we thus selected eight candidate diastereomers. Stereodivergent synthesis of the candidates for this fragment and comparison of the NMR data of the natural product and the eight synthetic products resulted in the relative stereostructural clarification of the C69-C83 fragment. These individually determined relative stereochemistries of the C61-C74 and C69-C83 fragments were connected via the common C69-C73 tetrahydropyran moiety of the fragments. Finally, the relative configuration of the C61-C83 fragment of symbiodinolide was determined. The stereodivergent synthetic approach used in this study can be extended to the stereochemical determination of other fragments of symbiodinolide.
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Affiliation(s)
- Hiroyoshi Takamura
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Kosuke Hattori
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Takumi Ohashi
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Taichi Otsu
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Isao Kadota
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
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2
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Call A, Capocasa G, Palone A, Vicens L, Aparicio E, Choukairi Afailal N, Siakavaras N, López Saló ME, Bietti M, Costas M. Highly Enantioselective Catalytic Lactonization at Nonactivated Primary and Secondary γ-C-H Bonds. J Am Chem Soc 2023; 145:18094-18103. [PMID: 37540636 PMCID: PMC10507665 DOI: 10.1021/jacs.3c06231] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Indexed: 08/06/2023]
Abstract
Chiral oxygenated aliphatic moieties are recurrent in biological and pharmaceutically relevant molecules and constitute one of the most versatile types of functionalities for further elaboration. Herein we report a protocol for straightforward and general access to chiral γ-lactones via enantioselective oxidation of strong nonactivated primary and secondary C(sp3)-H bonds in readily available carboxylic acids. The key enabling aspect is the use of robust sterically encumbered manganese catalysts that provide outstanding enantioselectivities (up to >99.9%) and yields (up to 96%) employing hydrogen peroxide as the oxidant. The resulting γ-lactones are of immediate interest for the preparation of inter alia natural products and recyclable polymeric materials.
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Affiliation(s)
- Arnau Call
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Giorgio Capocasa
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Andrea Palone
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Laia Vicens
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Eric Aparicio
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Najoua Choukairi Afailal
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Nikos Siakavaras
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Maria Eugènia López Saló
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Massimo Bietti
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1 I-00133 Rome, Italy
| | - Miquel Costas
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
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3
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Bhatt D, Kim HY, Oh K. Chemodivergent Sulfonylation of Enynones via Ionic and Radical Addition Modes of Sulfinic Acids. Org Lett 2023. [PMID: 37494288 DOI: 10.1021/acs.orglett.3c02218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/28/2023]
Abstract
Different addition modes of sulfinic acids were developed for the chemodivergent sulfonylation of enynones, where the ionic sulfonylation to an alkyne moiety of enynones was effected through a salt-controlled syn-addition pathway. The radical sulfonylation of an alkene moiety also provided the stereodefined sulfonylated alkenes. A one-pot tandem sequence of the Ti(Oi-Pr)4-catalyzed α-vinyl aldol condensation of (E)-β-chlorovinyl ketones followed by the chemodivergent sulfonylations was also explored, allowing for ready access to highly substituted dienes and enynes.
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Affiliation(s)
- Divya Bhatt
- Center for Metareceptome Research, Graduate School of Pharmaceutical Sciences, Chung-Ang University, 84 Heukseok-ro, Dongjak, Seoul 06974, Republic of Korea
| | - Hun Young Kim
- Department of Global Innovative Drugs, Chung-Ang University, 84 Heukseok-ro, Dongjak, Seoul 06974, Republic of Korea
| | - Kyungsoo Oh
- Center for Metareceptome Research, Graduate School of Pharmaceutical Sciences, Chung-Ang University, 84 Heukseok-ro, Dongjak, Seoul 06974, Republic of Korea
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4
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Call A, Cianfanelli M, Besalú-Sala P, Olivo G, Palone A, Vicens L, Ribas X, Luis JM, Bietti M, Costas M. Carboxylic Acid Directed γ-Lactonization of Unactivated Primary C-H Bonds Catalyzed by Mn Complexes: Application to Stereoselective Natural Product Diversification. J Am Chem Soc 2022; 144:19542-19558. [PMID: 36228322 DOI: 10.1021/jacs.2c08620] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Reactions that enable selective functionalization of strong aliphatic C-H bonds open new synthetic paths to rapidly increase molecular complexity and expand chemical space. Particularly valuable are reactions where site-selectivity can be directed toward a specific C-H bond by catalyst control. Herein we describe the catalytic site- and stereoselective γ-lactonization of unactivated primary C-H bonds in carboxylic acid substrates. The system relies on a chiral Mn catalyst that activates aqueous hydrogen peroxide to promote intramolecular lactonization under mild conditions, via carboxylate binding to the metal center. The system exhibits high site-selectivity and enables the oxidation of unactivated primary γ-C-H bonds even in the presence of intrinsically weaker and a priori more reactive secondary and tertiary ones at α- and β-carbons. With substrates bearing nonequivalent γ-C-H bonds, the factors governing site-selectivity have been uncovered. Most remarkably, by manipulating the absolute chirality of the catalyst, γ-lactonization at methyl groups in gem-dimethyl structural units of rigid cyclic and bicyclic carboxylic acids can be achieved with unprecedented levels of diastereoselectivity. Such control has been successfully exploited in the late-stage lactonization of natural products such as camphoric, camphanic, ketopinic, and isoketopinic acids. DFT analysis points toward a rebound type mechanism initiated by intramolecular 1,7-HAT from a primary γ-C-H bond of the bound substrate to a highly reactive MnIV-oxyl intermediate, to deliver a carbon radical that rapidly lactonizes through carboxylate transfer. Intramolecular kinetic deuterium isotope effect and 18O labeling experiments provide strong support to this mechanistic picture.
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Affiliation(s)
- Arnau Call
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Marco Cianfanelli
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Pau Besalú-Sala
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Giorgio Olivo
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Andrea Palone
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain.,Dipartimento di Scienze e Tecnologie Chimiche, Università "Tor Vergata", Via della Ricerca Scientifica 1, I-00133 Rome, Italy
| | - Laia Vicens
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Xavi Ribas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Josep M Luis
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
| | - Massimo Bietti
- Dipartimento di Scienze e Tecnologie Chimiche, Università "Tor Vergata", Via della Ricerca Scientifica 1, I-00133 Rome, Italy
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17003, Catalonia, Spain
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5
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Phosphine oxide directing-group-enabled atroposelective C–H bond acyloxylation via an eight-membered palladacycle intermediate. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.107894] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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6
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Santos RA, Pinto DC, Silva AM. NMR Structural Characterization of Oxygen Heterocyclic Compounds. HETEROCYCLES 2022. [DOI: 10.1002/9783527832002.ch13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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7
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Belen’kii LI, Gazieva GA, Evdokimenkova YB, Soboleva NO. The literature of heterocyclic chemistry, Part XX, 2020. ADVANCES IN HETEROCYCLIC CHEMISTRY 2022. [DOI: 10.1016/bs.aihch.2022.10.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
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8
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Eng F, Marin JE, Zienkiewicz K, Gutiérrez-Rojas M, Favela-Torres E, Feussner I. Jasmonic acid biosynthesis by fungi: derivatives, first evidence on biochemical pathways and culture conditions for production. PeerJ 2021; 9:e10873. [PMID: 33604199 PMCID: PMC7869668 DOI: 10.7717/peerj.10873] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Accepted: 01/11/2021] [Indexed: 12/20/2022] Open
Abstract
Jasmonic acid (JA) and its derivatives called jasmonates (JAs) are lipid-derived signalling molecules that are produced by plants and certain fungi. Beside this function, JAs have a great variety of applications in flavours and fragrances production. In addition, they may have a high potential in agriculture. JAs protect plants against infections. Although there is much information on the biosynthesis and function of JA concerning plants, knowledge on these aspects is still scarce for fungi. Taking into account the practical importance of JAs, the objective of this review is to summarize knowledge on the occurrence of JAs from fungal culture media, their biosynthetic pathways and the culture conditions for optimal JA production as an alternative source for the production of these valuable metabolites.
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Affiliation(s)
- Felipe Eng
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences, University of Goettingen, Goettingen, Germany.,Biotechnology Division, Cuban Research Institute on Sugar Cane Byproducts (ICIDCA), Havana, Cuba.,Laboratório de Processos Biológicos, Escola de Engenharia de São Carlos, Universidade de São Paulo (LPB/EESC/USP), São Carlos, Brasil
| | - Jorge Erick Marin
- Laboratório de Processos Biológicos, Escola de Engenharia de São Carlos, Universidade de São Paulo (LPB/EESC/USP), São Carlos, Brasil
| | - Krzysztof Zienkiewicz
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences, University of Goettingen, Goettingen, Germany
| | - Mariano Gutiérrez-Rojas
- Campus Iztapalapa, Biotechnology Department, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Ernesto Favela-Torres
- Campus Iztapalapa, Biotechnology Department, Universidad Autónoma Metropolitana, Mexico City, Mexico
| | - Ivo Feussner
- Department of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences, University of Goettingen, Goettingen, Germany.,Department of Plant Biochemistry, Goettingen Center for Molecular Biosciences (GZMB), University of Goettingen, Goettingen, Germany.,Department of Plant Biochemistry, International Center for advanced Studies of Energy Conversion (ICASEC), University of Goettingen, Goettingen, Germany
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9
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Andler O, Kazmaier U. A Straightforward Synthesis of Polyketides via Ester Dienolate Matteson Homologation. Chemistry 2021; 27:949-953. [PMID: 33089903 PMCID: PMC7839490 DOI: 10.1002/chem.202004650] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Indexed: 12/22/2022]
Abstract
Application of ester dienolates as nucleophiles in Matteson homologations allows for the stereoselective synthesis of highly substituted α,β-unsaturated δ-hydroxy carboxyl acids, structural motifs widespread found in polyketide natural products. The protocol is rather flexible and permits the introduction of substituents and functionalities also at those positions which are not accessible by the commonly used aldol reaction. Therefore, this ester dienolate Matteson approach is an interesting alternative to the "classical" polyketide syntheses.
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Affiliation(s)
- Oliver Andler
- Institut für Organische ChemieUniversität des SaarlandesCampus C4.266123SaarbrückenGermany
| | - Uli Kazmaier
- Institut für Organische ChemieUniversität des SaarlandesCampus C4.266123SaarbrückenGermany
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10
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Dong J, Wang L, Li H, Leng X, Guo X, Hu Z, Xu X. Self-cyclization vs. dimerization of o-alkenyl arylisocyanides: chemodivergent synthesis of quinolines and pyrrolo-fused diindoles. Org Chem Front 2021. [DOI: 10.1039/d1qo00132a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Solvent-dependent chemoselective MBH-type self-cyclization and dimerization of o-alkenyl arylisocyanides were developed for the efficient and chemodivergent synthesis of various 3-acylquinoline and pyrrolo-fused diindole frameworks.
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Affiliation(s)
- Jinhuan Dong
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Lei Wang
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Haoyue Li
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Xinrong Leng
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Xiaoyu Guo
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Zhongyan Hu
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
| | - Xianxiu Xu
- College of Chemistry
- Chemical Engineering and Materials Science
- Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong
- Key Laboratory of Molecular and Nano Probes
- Ministry of Education
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11
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Yong X, Ng EWH, Zhen Z, Lin X, Gao W, Ho C. NHC‐Ni(0) Catalyzed Diastereodivergent Hydroacylative Enyne Cyclization: Synthesis of Heterocycles bearing γ‐Enone. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000718] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Xuefeng Yong
- School of Chemistry and Chemical Engineering Harbin Institute of Technology Harbin Heilongjiang People's Republic of China 150001
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
| | - Elvis Wang Hei Ng
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
- Department of Chemistry The University of Hong Kong Pokfulam Road Hong Kong, People's Republic of China
| | - Zibo Zhen
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
| | - Xiulian Lin
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
| | - Weiwei Gao
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
| | - Chun‐Yu Ho
- Shenzhen Grubbs Institute Southern University of Science and Technology (SUSTech) Shenzhen Guangdong People's Republic of China 518055
- Guangdong Provincial Key Laboratory of Catalysis Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
- Department of Chemistry Southern University of Science and Technology Shenzhen Guangdong People's Republic of China 518055
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12
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Abstract
An important strategy for the efficient generation of diversity in molecular structures is the utilization of common starting materials in chemodivergent transformations. The most studied solutions for switching the chemoselectivity rely on the catalyst, ligand, additive, solvent, temperature, time, pressure, pH and even small modifications in the substrate. In this review article several processes have been selected such as inter- and intramolecular cyclizations, including carba-, oxa-, thia- and oxazacyclizations promoted mainly by Brønsted or Lewis acids, transition metals and organocatalysts, as well as radical reactions. Catalyst-controlled intra- and intermolecular cyclizations are mainly described to give five- and six-membered rings. Cycloaddition reactions involving (2+2), (3+2), (3+3), (4+1), (4+2), (5+2), (6+2) and (7+2) processes are useful reactions for the synthesis of cyclic systems using organocatalysts, metal catalysts and Lewis acid-controlled processes. Addition reactions mainly of carba- and heteronucleophiles to unsaturated conjugated substrates can give different adducts via metal catalyst-, Lewis acid- and solvent-dependent processes. Carbonylation reactions of amines and phenols are carried out via ligand-controlled transition metal-catalyzed multicomponent processes. Ring-opening reactions starting mainly from cyclopropanols, cyclopropenols and epoxides or aziridines are applied to the synthesis of acyclic versus cyclic products under catalyst-control mainly by Lewis acids. Chemodivergent reduction reactions are performed using dissolving metals, sodium borohydride or hydrogen transfer conditions under solvent control. Oxidation reactions include molecular oxygen under solvent control or using different dioxiranes, as well as chemodivergent palladium catalyzed cross-coupling reactions using boronic acids are applied to aromatic and allenic compounds. Other chemodivergent reactions such as alkylations and allylations under transition metal catalysis, dimerization of acetylenes, bromination of benzylic substrates, and A3-couplings are performed via catalyst- or reaction condition-dependent processes.
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Affiliation(s)
- Irina P Beletskaya
- Chemistry Department, M. V. Lomonosov Moscow University, Leminskie Gory 1, 119992 Moscow, Russia
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