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Fu R, Ramamoorthy A. 17O Solid-State NMR Spectroscopy of Lipid Membranes. J Phys Chem B 2024; 128:3527-3537. [PMID: 38568422 DOI: 10.1021/acs.jpcb.4c01016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/19/2024]
Abstract
Despite the limitations posed by poor sensitivity, studies have reported the unique advantages of 17O based NMR spectroscopy to study systems existing in liquid, solid, or semisolid states. 17O NMR studies have exploited the remarkable sensitivity of quadrupole coupling and chemical shift anisotropy tensors to the local environment in the characterization of a variety of intra- and intermolecular interactions and motion. Recent studies have considerably expanded the use of 17O NMR to study dynamic intermolecular interactions associated with some of the challenging biological systems under magic angle spinning (MAS) and aligned conditions. The very fast relaxing nature of 17O has been well utilized in cellular and in vivo MRS (magnetic resonance spectroscopy) and MRI (magnetic resonance imaging) applications. The main focus of this Review is to highlight the new developments in the biological solids with a detailed discussion for a few selected examples including membrane proteins and nanodiscs. In addition to the unique benefits and limitations, the remaining challenges to overcome, and the impacts of higher magnetic fields and sensitivity enhancement techniques are discussed.
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Affiliation(s)
- Riqiang Fu
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Ayyalusamy Ramamoorthy
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
- Department of Chemical and Biomedical Engineering, Institute of Molecular Biophysics, Florida State University, Tallahassee, Florida 32310, United States
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Venel F, Giovine R, Laurencin D, Špačková J, Mittelette S, Métro TX, Volkringer C, Lafon O, Pourpoint F. Probing oxygen exchange between UiO-66(Zr) MOF and water using 17 O solid-state NMR. Chemistry 2024; 30:e202302731. [PMID: 38227358 DOI: 10.1002/chem.202302731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Indexed: 01/17/2024]
Abstract
The Zr-based Metal Organic Framework (MOF) UiO-66(Zr) is widely employed owing to its good thermal and chemical stabilities. Although the long-range structure of this MOF is preserved in the presence of water during several days, little is known about the formation of defects, which cannot be detected using diffraction techniques. We apply here 17 O solid-state NMR spectroscopy at 18.8 T to investigate the reactivity of UiO-66, through the exchange of oxygen atoms between the different sites of the MOF and water. For that purpose, we have selectively enriched in 17 O isotope the carboxylate groups of UiO-66(Zr) by using it with 17 O-labeled terephthalic acid prepared using mechanochemistry. In the presence of water at 50 °C and a following dehydration at 150 °C, we observe an overall exchange of O atoms between COO- and μ3 -O2- sites. Furthermore, we demonstrate that the three distinct oxygen sites, μ3 -OH, μ3 -O2- and COO- , of UiO-66(Zr) MOF can be enriched in 17 O isotope by post-synthetic hydrothermal treatment in the presence of 17 O-enriched water. These results demonstrate the lability of Zr-O bonds and the reactivity of UiO-66(Zr) with water.
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Affiliation(s)
- Florian Venel
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Raynald Giovine
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Danielle Laurencin
- Institut Charles Gerhardt Montpellier, UMR-5253 CNRS-UM-ENSCM, 1919 route de Mende, 34095, Montpellier, Cedex 05, France
| | - Jessica Špačková
- Institut Charles Gerhardt Montpellier, UMR-5253 CNRS-UM-ENSCM, 1919 route de Mende, 34095, Montpellier, Cedex 05, France
| | - Sébastien Mittelette
- Institut Charles Gerhardt Montpellier, UMR-5253 CNRS-UM-ENSCM, 1919 route de Mende, 34095, Montpellier, Cedex 05, France
| | - Thomas-Xavier Métro
- Institut Charles Gerhardt Montpellier, UMR-5253 CNRS-UM-ENSCM, 1919 route de Mende, 34095, Montpellier, Cedex 05, France
| | - Christophe Volkringer
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Olivier Lafon
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Frédérique Pourpoint
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181 - UCCS - Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
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Moroz IB, Feldman Y, Carmieli R, Liu X, Leskes M. Endogenous metal-ion dynamic nuclear polarization for NMR signal enhancement in metal organic frameworks. Chem Sci 2023; 15:336-348. [PMID: 38131097 PMCID: PMC10731914 DOI: 10.1039/d3sc03456a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Accepted: 11/23/2023] [Indexed: 12/23/2023] Open
Abstract
Rational design of metal-organic framework (MOF)-based materials for catalysis, gas capture and storage, requires deep understanding of the host-guest interactions between the MOF and the adsorbed molecules. Solid-State NMR spectroscopy is an established tool for obtaining such structural information, however its low sensitivity limits its application. This limitation can be overcome with dynamic nuclear polarization (DNP) which is based on polarization transfer from unpaired electrons to the nuclei of interest and, as a result, enhancement of the NMR signal. Typically, DNP is achieved by impregnating or wetting the MOF material with a solution of nitroxide biradicals, which prevents or interferes with the study of host-guest interactions. Here we demonstrate how Gd(iii) ions doped into the MOF structure, LaBTB (BTB = 4,4',4''-benzene-1,3,5-triyl-trisbenzoate), can be employed as an efficient polarization agent, yielding up to 30-fold 13C signal enhancement for the MOF linkers, while leaving the pores empty for potential guests. Furthermore, we demonstrate that ethylene glycol, loaded into the MOF as a guest, can also be polarized using our approach. We identify specific challenges in DNP studies of MOFs, associated with residual oxygen trapped within the MOF pores and the dynamics of the framework and its guests, even at cryogenic temperatures. To address these, we describe optimal conditions for carrying out and maximizing the enhancement achieved in DNP-NMR experiments. The approach presented here can be expanded to other porous materials which are currently the state-of-the-art in energy and sustainability research.
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Affiliation(s)
- Ilia B Moroz
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science Rehovot 76100 Israel
| | - Yishay Feldman
- Department of Chemical Research Support, Weizmann Institute of Science Rehovot 76100 Israel
| | - Raanan Carmieli
- Department of Chemical Research Support, Weizmann Institute of Science Rehovot 76100 Israel
| | - Xinyu Liu
- Yusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Michal Leskes
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science Rehovot 76100 Israel
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Hung I, Keeler EG, Mao W, Gor'kov PL, Griffin RG, Gan Z. Residue-Specific High-Resolution 17O Solid-State Nuclear Magnetic Resonance of Peptides: Multidimensional Indirect 1H Detection and Magic-Angle Spinning. J Phys Chem Lett 2022; 13:6549-6558. [PMID: 35830592 PMCID: PMC9888599 DOI: 10.1021/acs.jpclett.2c01777] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Oxygen is an integral component of proteins but remains sparsely studied because its only NMR active isotope, 17O, has low sensitivity, low resolution, and large quadrupolar couplings. These issues are addressed here with efficient isotopic labeling, high magnetic fields, fast sample spinning, and 1H detection in conjunction with multidimensional experiments to observe oxygen sites specific to each amino acid residue. Notably, cross-polarization at high sample spinning frequencies provides efficient 13C ↔ 17O polarization transfer. The use of 17O for initial polarization is found to provide better sensitivity per unit time compared to 1H. Sharp isotropic 17O peaks are obtained by using a low-power multiple-quantum sequence, which in turn allows extraction of quadrupolar parameters for each oxygen site. Finally, the potential to determine sequential assignments and long-range distance restraints is demonstrated by using 3D 1H/13C/17O experiments, suggesting that such methods can become an essential tool for biomolecular structure determination.
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Affiliation(s)
- Ivan Hung
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, United States
| | - Eric G Keeler
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Wenping Mao
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, United States
| | - Peter L Gor'kov
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, United States
| | - Robert G Griffin
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Zhehong Gan
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, United States
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Hilty C, Kurzbach D, Frydman L. Hyperpolarized water as universal sensitivity booster in biomolecular NMR. Nat Protoc 2022; 17:1621-1657. [PMID: 35546640 DOI: 10.1038/s41596-022-00693-8] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 02/25/2022] [Indexed: 11/09/2022]
Abstract
NMR spectroscopy is the only method to access the structural dynamics of biomolecules at high (atomistic) resolution in their native solution state. However, this method's low sensitivity has two important consequences: (i) typically experiments have to be performed at high concentrations that increase sensitivity but are not physiological, and (ii) signals have to be accumulated over long periods, complicating the determination of interaction kinetics on the order of seconds and impeding studies of unstable systems. Both limitations are of equal, fundamental relevance: non-native conditions are of limited pharmacological relevance, and the function of proteins, enzymes and nucleic acids often relies on their interaction kinetics. To overcome these limitations, we have developed applications that involve 'hyperpolarized water' to boost signal intensities in NMR of proteins and nucleic acids. The technique includes four stages: (i) preparation of the biomolecule in partially deuterated buffers, (ii) preparation of 'hyperpolarized' water featuring enhanced 1H NMR signals via cryogenic dynamic nuclear polarization, (iii) sudden melting of the cryogenic pellet and dissolution of the protein or nucleic acid in the hyperpolarized water (enabling spontaneous exchanges of protons between water and target) and (iv) recording signal-amplified NMR spectra targeting either labile 1H or neighboring 15N/13C nuclei in the biomolecule. Water in the ensuing experiments is used as a universal 'hyperpolarization' agent, rendering the approach versatile and applicable to any biomolecule possessing labile hydrogens. Thus, questions can be addressed, ranging from protein and RNA folding problems to resolving structure-function relationships of intrinsically disordered proteins to investigating membrane interactions.
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Affiliation(s)
- Christian Hilty
- Chemistry Department, Texas A&M University, College Station, TX, USA.
| | - Dennis Kurzbach
- Faculty of Chemistry, Institute for Biological Chemistry, University of Vienna, Vienna, Austria.
| | - Lucio Frydman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, Israel.
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Ashbrook SE, Davis ZH, Morris RE, Rice CM. 17O NMR spectroscopy of crystalline microporous materials. Chem Sci 2021; 12:5016-5036. [PMID: 34163746 PMCID: PMC8179582 DOI: 10.1039/d1sc00552a] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Accepted: 02/25/2021] [Indexed: 12/16/2022] Open
Abstract
Microporous materials, containing pores and channels of similar dimensions to small molecules have a range of applications in catalysis, gas storage and separation and in drug delivery. Their complex structure, often containing different types and levels of positional, compositional and temporal disorder, makes structural characterisation challenging, with information on both long-range order and the local environment required to understand the structure-property relationships and improve the future design of functional materials. In principle, 17O NMR spectroscopy should offer an ideal tool, with oxygen atoms lining the pores of many zeolites and phosphate frameworks, playing a vital role in host-guest chemistry and reactivity, and linking the organic and inorganic components of metal-organic frameworks (MOFs). However, routine study is challenging, primarily as a result of the low natural abundance of this isotope (0.037%), exacerbated by the presence of the quadrupolar interaction that broadens the spectral lines and hinders the extraction of information. In this Perspective, we will highlight the current state-of-the-art for 17O NMR of microporous materials, focusing in particular on cost-effective and atom-efficient approaches to enrichment, the use of enrichment to explore chemical reactivity, the challenge of spectral interpretation and the approaches used to help this and the information that can be obtained from NMR spectra. Finally, we will turn to the remaining challenges, including further improving sensitivity, the high-throughput generation of multiple structural models for computational study and the possibility of in situ and in operando measurements, and give a personal perspective on how these required improvements can be used to help solve important problems in microporous materials chemistry.
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Affiliation(s)
- Sharon E Ashbrook
- School of Chemistry, EaStCHEM and Centre of Magnetic Resonance, University of St Andrews St Andrews KY16 9ST UK
| | - Zachary H Davis
- School of Chemistry, EaStCHEM and Centre of Magnetic Resonance, University of St Andrews St Andrews KY16 9ST UK
| | - Russell E Morris
- School of Chemistry, EaStCHEM and Centre of Magnetic Resonance, University of St Andrews St Andrews KY16 9ST UK
| | - Cameron M Rice
- School of Chemistry, EaStCHEM and Centre of Magnetic Resonance, University of St Andrews St Andrews KY16 9ST UK
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Klein BA, Tkachuk DG, Terskikh VV, Michaelis VK. Expanding the NMR toolkit for biological solids: oxygen-17 enriched Fmoc-amino acids. NEW J CHEM 2021. [DOI: 10.1039/d1nj02847b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
We report the solid-state 17O NMR parameters for five previously uncharacterized N-α-fluoren-9-yl-methoxycarbonyl-O-t-butyl (Fmoc) protected amino acids.
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