Transport and programmed release of nanoscale cargo from cells by using NETosis

Neutrophil Extracellular Traps in Tumors and Potential Use of Traditional Herbal Medicine Formulations for Its Regulation

Neutrophil extracellular traps (NETs) are extracellular fibers composed of deoxyribonucleic acid (DNA) and decorated proteins produced by neutrophils. Recently, NETs have been associated with the development of many diseases, including tumors. Herein, we reviewed the correlation between NETs and tumors. In addition, we detailed active compounds from traditional herbal medicine formulations that inhibit NETs, related nanodrug delivery systems, and antibodies that serve as "guiding moieties" to ensure targeted delivery to NETs. Furthermore, we discussed the strategies used by pathogenic microorganisms to evade NETs.

Guanine Quantum Defects in Carbon Nanotubes for Biosensing

Fluorescent single-wall carbon nanotubes (SWCNTs) are used as nanoscale biosensors in diverse applications. Selectivity is built in by noncovalent functionalization with polymers such as DNA. Recently, covalent functionalization was demonstrated by conjugating guanine bases of adsorbed DNA to the SWCNT surface as guanine quantum defects (g-defects). Here, we create g-defects in (GT)₁₀-coated SWCNTs (G^d-SWCNTs) and explore how this affects molecular sensing. We vary the defect densities, which shifts the E₁₁ fluorescence emission by 55 nm to a λ_max of 1049 nm. Furthermore, the Stokes shift between absorption and emission maximum linearly increases with defect density by up to 27 nm. G^d-SWCNTs represent sensitive sensors and increase their fluorescence by >70% in response to the important neurotransmitter dopamine and decrease it by 93% in response to riboflavin. Additionally, the extent of cellular uptake of G^d-SWCNTs decreases. These results show how physiochemical properties change with g-defects and that G^d-SWCNTs constitute a versatile optical biosensor platform.

Biosensing with Fluorescent Carbon Nanotubes

Biosensors are powerful tools for modern basic research and biomedical diagnostics. Their development requires substantial input from the chemical sciences. Sensors or probes with an optical readout, such as fluorescence, offer rapid, minimally invasive sensing of analytes with high spatial and temporal resolution. The near‐infrared (NIR) region is beneficial because of the reduced background and scattering of biological samples (tissue transparency window) in this range. In this context, single‐walled carbon nanotubes (SWCNTs) have emerged as versatile NIR fluorescent building blocks for biosensors. Here, we provide an overview of advances in SWCNT‐based NIR fluorescent molecular sensors. We focus on chemical design strategies for diverse analytes and summarize insights into the photophysics and molecular recognition. Furthermore, different application areas are discussed—from chemical imaging of cellular systems and diagnostics to in vivo applications and perspectives for the future.

Super-Resolution Radial Fluctuations (SRRF) nanoscopy in the near infrared

Super resolution microscopy methods have been designed to overcome the physical barrier of the diffraction limit and push the resolution to nanometric scales. A recently developed super resolution technique, super-resolution radial fluctuations (SRRF) [Nature communications, 7, 12471 (2016)10.1038/ncomms12471], has been shown to super resolve images taken with standard microscope setups without fluorophore localization. Herein, we implement SRRF on emitters in the near-infrared (nIR) range, single walled carbon nanotubes (SWCNTs), whose fluorescence emission overlaps with the biological transparency window. Our results open the path for super-resolving SWCNTs for biomedical imaging and sensing applications.

Photophysical properties and fluorescence lifetime imaging of exfoliated near-infrared fluorescent silicate nanosheets

The layered silicates Egyptian Blue (CaCuSi₄O₁₀, EB), Han Blue (BaCuSi₄O₁₀, HB) and Han Purple (BaCuSi₂O₆, HP) emit as bulk materials bright and stable fluorescence in the near-infrared (NIR), which is of high interest for (bio)photonics due to minimal scattering, absorption and phototoxicity in this spectral range. So far the optical properties of nanosheets (NS) of these silicates are poorly understood. Here, we exfoliate them into monodisperse nanosheets, report their physicochemical properties and use them for (bio)photonics. The approach uses ball milling followed by tip sonication and centrifugation steps to exfoliate the silicates into NS with lateral size and thickness down to ≈ 16-27 nm and 1-4 nm, respectively. They emit at ≈ 927 nm (EB-NS), 953 nm (HB-NS) and 924 nm (HP-NS), and single NS can be imaged in the NIR. The fluorescence lifetimes decrease from ≈ 30-100 μs (bulk) to 17 μs (EB-NS), 8 μs (HB-NS) and 7 μs (HP-NS), thus enabling lifetime-encoded multicolor imaging both on the microscopic and the macroscopic scale. Finally, remote imaging through tissue phantoms reveals the potential for bioimaging. In summary, we report a procedure to gain monodisperse NIR fluorescent silicate nanosheets, determine their size-dependent photophysical properties and showcase the potential for NIR photonics.

Sensing with Chirality-Pure Near-Infrared Fluorescent Carbon Nanotubes

Semiconducting single-wall carbon nanotubes (SWCNTs) fluoresce in the near-infrared (NIR) region, and the emission wavelength depends on their chirality (n,m). Interactions with the environment affect the fluorescence and can be tailored by functionalizing SWCNTs with biopolymers such as DNA, which is the basis for fluorescent biosensors. So far, such biosensors have been mainly assembled from mixtures of SWCNT chiralities with large spectral overlap, which affects sensitivity as well as selectivity and prevents multiplexed sensing. The main challenge to gain chirality-pure sensors has been to combine approaches to isolate specific SWCNTs and generic (bio)functionalization approaches. Here, we created chirality-pure SWCNT-based NIR biosensors for important analytes such as neurotransmitters and investigated the effect of SWCNT chirality/handedness as well as long-term stability and sensitivity. For this purpose, we used aqueous two-phase extraction (ATPE) to gain chirality-pure (6,5)-, (7,5)-, (9,4)-, and (7,6)-SWCNTs (emission at ∼990, 1040, 1115, and 1130 nm, respectively). An exchange of the surfactant sodium deoxycholate (DOC) to specific single-stranded (ss)DNA sequences yielded monochiral sensors for small analytes (dopamine, riboflavin, ascorbic acid, pH). DOC residues impaired sensitivity, and therefore substantial removal was necessary. The assembled monochiral (6,5)-SWCNTs were up to 10 times brighter than their nonpurified counterparts, and the ssDNA sequence determined the absolute fluorescence intensity as well as colloidal (long-term) stability and selectivity for the analytes. (GT)₄₀-(6,5)-SWCNTs displayed the maximum fluorescence response to the neurotransmitter dopamine (+140%, K_d = 1.9 × 10^-7 M) and a long-term stability of >14 days. The specific ssDNA sequences imparted selectivity to the analytes mostly independent of SWCNT chirality and handedness of (±) (6,5)-SWCNTs, which allowed a predictable design. Finally, multiple monochiral/single-color SWCNTs were combined to achieve ratiometric/multiplexed sensing of the important analytes dopamine, riboflavin, H₂O₂, and pH. In summary, we demonstrated the assembly, characteristics, and potential of monochiral (single-color) SWCNTs for NIR fluorescence sensing applications.

Remote near infrared identification of pathogens with multiplexed nanosensors

Infectious diseases are worldwide a major cause of morbidity and mortality. Fast and specific detection of pathogens such as bacteria is needed to combat these diseases. Optimal methods would be non-invasive and without extensive sample-taking/processing. Here, we developed a set of near infrared (NIR) fluorescent nanosensors and used them for remote fingerprinting of clinically important bacteria. The nanosensors are based on single-walled carbon nanotubes (SWCNTs) that fluoresce in the NIR optical tissue transparency window, which offers ultra-low background and high tissue penetration. They are chemically tailored to detect released metabolites as well as specific virulence factors (lipopolysaccharides, siderophores, DNases, proteases) and integrated into functional hydrogel arrays with 9 different sensors. These hydrogels are exposed to clinical isolates of 6 important bacteria (Staphylococcus aureus, Escherichia coli,…) and remote (≥25 cm) NIR imaging allows to identify and distinguish bacteria. Sensors are also spectrally encoded (900 nm, 1000 nm, 1250 nm) to differentiate the two major pathogens P. aeruginosa as well as S. aureus and penetrate tissue (>5 mm). This type of multiplexing with NIR fluorescent nanosensors enables remote detection and differentiation of important pathogens and the potential for smart surfaces.

Fast and specific detection of pathogenic bacteria is needed to combat infections. Here the authors generate an array of near-infrared biosensors based on carbon nanotubes to detect released metabolites and virulence factors and use them to distinguish pathogens such as S. aureus and P. aeruginosa.