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For: Ford MJ. Applications of selective neutrality tests to molecular ecology. Mol Ecol 2002;11:1245-62. [PMID: 12144648 PMCID: PMC7201874 DOI: 10.1046/j.1365-294x.2002.01536.x] [Citation(s) in RCA: 129] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2001] [Revised: 04/10/2002] [Accepted: 04/10/2002] [Indexed: 11/20/2022]
Number Cited by Other Article(s)
1
Moreno K, Rico DM, Middlebrooks M, Medrano S, Valdés ÁA, Krug PJ. A cryptic radiation of Caribbean sea slugs revealed by integrative analysis: Cyerce 'antillensis' (Sacoglossa: Caliphyllidae) is six distinct species. Zool J Linn Soc 2024;200:940-979. [PMID: 38566915 PMCID: PMC10983082 DOI: 10.1093/zoolinnean/zlad111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 07/14/2023] [Accepted: 07/31/2023] [Indexed: 04/04/2024]
2
Rodriguez AK, Krug PJ. Ecological speciation by sympatric host shifts in a clade of herbivorous sea slugs, with introgression and localized mitochondrial capture between species. Mol Phylogenet Evol 2022;174:107523. [PMID: 35589054 DOI: 10.1016/j.ympev.2022.107523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 03/30/2022] [Accepted: 05/06/2022] [Indexed: 11/25/2022]
3
Trevisan B, Jacob Machado D, Lahr DJG, Marques FPL. Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms). Front Genet 2022;12:788871. [PMID: 35003223 PMCID: PMC8727539 DOI: 10.3389/fgene.2021.788871] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 11/23/2021] [Indexed: 12/26/2022]  Open
4
Biswas MK, Bagchi M, Biswas D, Harikrishna JA, Liu Y, Li C, Sheng O, Mayer C, Yi G, Deng G. Genome-Wide Novel Genic Microsatellite Marker Resource Development and Validation for Genetic Diversity and Population Structure Analysis of Banana. Genes (Basel) 2020;11:genes11121479. [PMID: 33317074 PMCID: PMC7763637 DOI: 10.3390/genes11121479] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Revised: 11/20/2020] [Accepted: 11/20/2020] [Indexed: 11/17/2022]  Open
5
Ben Slimen H, Awadi A, Tolesa ZG, Knauer F, Alves PC, Makni M, Suchentrunk F. Positive selection on the mitochondrialATP synthase 6and theNADH dehydrogenase 2genes across 22 hare species (genusLepus). J ZOOL SYST EVOL RES 2018. [DOI: 10.1111/jzs.12204] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
6
Münch PC, Stecher B, McHardy AC. EDEN: evolutionary dynamics within environments. Bioinformatics 2018. [PMID: 28637301 PMCID: PMC5860032 DOI: 10.1093/bioinformatics/btx394] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
7
Gilroy DL, Phillips KP, Richardson DS, van Oosterhout C. Toll-like receptor variation in the bottlenecked population of the Seychelles warbler: computer simulations see the 'ghost of selection past' and quantify the 'drift debt'. J Evol Biol 2017;30:1276-1287. [PMID: 28370771 DOI: 10.1111/jeb.13077] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2016] [Accepted: 03/21/2017] [Indexed: 01/09/2023]
8
Veličković N, Ferreira E, Djan M, Ernst M, Obreht Vidaković D, Monaco A, Fonseca C. Demographic history, current expansion and future management challenges of wild boar populations in the Balkans and Europe. Heredity (Edinb) 2016;117:348-357. [PMID: 27436523 PMCID: PMC5061920 DOI: 10.1038/hdy.2016.53] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2015] [Revised: 05/31/2016] [Accepted: 06/08/2016] [Indexed: 02/01/2023]  Open
9
Salgueiro P, Lopes AS, Mendes C, Charlwood JD, Arez AP, Pinto J, Silveira H. Molecular evolution and population genetics of a Gram-negative binding protein gene in the malaria vector Anopheles gambiae (sensu lato). Parasit Vectors 2016;9:515. [PMID: 27658383 PMCID: PMC5034674 DOI: 10.1186/s13071-016-1800-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2016] [Accepted: 09/14/2016] [Indexed: 12/16/2022]  Open
10
Kamau LM, Skilton RA, Githaka N, Kiara H, Kabiru E, Shah T, Musoke AJ, Bishop RP. Extensive polymorphism of Ra86 genes in field populations of Rhipicephalus appendiculatus from Kenya. Ticks Tick Borne Dis 2016;7:772-781. [PMID: 27051976 DOI: 10.1016/j.ttbdis.2016.03.011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2015] [Revised: 03/15/2016] [Accepted: 03/16/2016] [Indexed: 10/22/2022]
11
Ashoff M, Schmitt T. Are Different Allozyme Genotypes of the ButterflyPolyommatus coridonAdapted to Resist Cold and Heat Shocks? ANN ZOOL FENN 2014. [DOI: 10.5735/086.051.0502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
12
Marra NJ, Romero A, DeWoody JA. Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq. Mol Ecol 2014;23:2699-711. [PMID: 24754676 DOI: 10.1111/mec.12764] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2014] [Revised: 04/12/2014] [Accepted: 04/17/2014] [Indexed: 12/23/2022]
13
Olsen MT, Pampoulie C, Daníelsdóttir AK, Lidh E, Bérubé M, Víkingsson GA, Palsbøll PJ. Fin whale MDH-1 and MPI allozyme variation is not reflected in the corresponding DNA sequences. Ecol Evol 2014;4:1787-803. [PMID: 24963377 PMCID: PMC4063476 DOI: 10.1002/ece3.1046] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2014] [Accepted: 02/07/2014] [Indexed: 11/07/2022]  Open
14
Anderson JD, Karel WJ, Mace CE, Bartram BL, Hare MP. Spatial genetic features of eastern oysters (Crassostrea virginica Gmelin) in the Gulf of Mexico: northward movement of a secondary contact zone. Ecol Evol 2014;4:1671-85. [PMID: 24967084 PMCID: PMC4063467 DOI: 10.1002/ece3.1064] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2014] [Revised: 03/18/2014] [Accepted: 03/19/2014] [Indexed: 11/07/2022]  Open
15
Manoharan SS, Miao VPW, Andrésson ÓS. LEC-2, a highly variable lectin in the lichen Peltigera membranacea.. Symbiosis 2012;58:91-98. [PMID: 23482294 PMCID: PMC3589653 DOI: 10.1007/s13199-012-0206-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2012] [Accepted: 11/26/2012] [Indexed: 12/31/2022]
16
Chaoui L, Gagnaire PA, Guinand B, Quignard JP, Tsigenopoulos C, Kara MH, Bonhomme F. Microsatellite length variation in candidate genes correlates with habitat in the gilthead sea bream Sparus aurata. Mol Ecol 2012;21:5497-511. [PMID: 23061421 DOI: 10.1111/mec.12062] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2012] [Revised: 08/31/2012] [Accepted: 09/04/2012] [Indexed: 11/30/2022]
17
O'Farrell B, Dennis C, Benzie JA, McGinnity P, Carlsson J, de Eyto E, Coughlan JP, Igoe F, Meehan R, Cross TF. Balancing selection on MHC class I in wild brown trout Salmo trutta. JOURNAL OF FISH BIOLOGY 2012;81:1357-1374. [PMID: 22957875 DOI: 10.1111/j.1095-8649.2012.03421.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
18
McMullan M, van Oosterhout C. Inference of selection based on temporal genetic differentiation in the study of highly polymorphic multigene families. PLoS One 2012;7:e42119. [PMID: 22900006 PMCID: PMC3416836 DOI: 10.1371/journal.pone.0042119] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2012] [Accepted: 07/02/2012] [Indexed: 01/12/2023]  Open
19
Xu T, Sun Y, Shi G, Wang R. Miiuy croaker hepcidin gene and comparative analyses reveal evidence for positive selection. PLoS One 2012;7:e35449. [PMID: 22511989 PMCID: PMC3325200 DOI: 10.1371/journal.pone.0035449] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2011] [Accepted: 03/17/2012] [Indexed: 12/03/2022]  Open
20
Chen D, Li P, Guo W, Ye F, Wu J, Wei D, Guo Z, Ye C. Molecular evolution of candidate sour taste receptor gene PKD1L3 in mammals. Genome 2011;54:890-7. [PMID: 22011139 DOI: 10.1139/g11-057] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
21
Xu T, Sun Y, Shi G, Cheng Y, Wang R. Characterization of the major histocompatibility complex class II genes in miiuy croaker. PLoS One 2011;6:e23823. [PMID: 21901139 PMCID: PMC3162010 DOI: 10.1371/journal.pone.0023823] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2011] [Accepted: 07/27/2011] [Indexed: 11/18/2022]  Open
22
Girard P, Angers B. The functional gene diversity in natural populations over postglacial areas: the shaping mechanisms behind genetic composition of longnose dace (Rhinichthys cataractae) in northeastern North America. J Mol Evol 2011;73:45-57. [PMID: 21861120 DOI: 10.1007/s00239-011-9456-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Accepted: 08/09/2011] [Indexed: 10/17/2022]
23
Jang-Liaw NH, Chou WH. Phylogeography of the fanged dicroglossine frog, Limnonectes fujianensis (Anura, Ranidae), in Taiwan. Zoolog Sci 2011;28:254-63. [PMID: 21466342 DOI: 10.2108/zsj.28.254] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
24
Bajgain P, Richardson BA, Price JC, Cronn RC, Udall JA. Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata). BMC Genomics 2011;12:370. [PMID: 21767398 PMCID: PMC3150299 DOI: 10.1186/1471-2164-12-370] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2010] [Accepted: 07/18/2011] [Indexed: 12/14/2022]  Open
25
Brieuc MSO, Naish KA. Detecting signatures of positive selection in partial sequences generated on a large scale: pitfalls, procedures and resources. Mol Ecol Resour 2011;11 Suppl 1:172-83. [PMID: 21429173 DOI: 10.1111/j.1755-0998.2010.02948.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
26
Kuchma O, Finkeldey R. Evidence for selection in response to radiation exposure: Pinus sylvestris in the Chernobyl exclusion zone. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2011;159:1606-1612. [PMID: 21429640 DOI: 10.1016/j.envpol.2011.02.049] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2010] [Revised: 02/17/2011] [Accepted: 02/26/2011] [Indexed: 05/30/2023]
27
Contrasting responses to selection in class I and class IIα major histocompatibility-linked markers in salmon. Heredity (Edinb) 2011;107:143-54. [PMID: 21266985 DOI: 10.1038/hdy.2010.177] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]  Open
28
Hayes ML, Eytan RI, Hellberg ME. High amino acid diversity and positive selection at a putative coral immunity gene (tachylectin-2). BMC Evol Biol 2010;10:150. [PMID: 20482872 PMCID: PMC2880987 DOI: 10.1186/1471-2148-10-150] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2009] [Accepted: 05/19/2010] [Indexed: 12/22/2022]  Open
29
Spurgin LG, Richardson DS. How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings. Proc Biol Sci 2010;277:979-88. [PMID: 20071384 DOI: 10.1098/rspb.2009.2084] [Citation(s) in RCA: 514] [Impact Index Per Article: 36.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
30
Bonin A, Paris M, Tetreau G, David JP, Després L. Candidate genes revealed by a genome scan for mosquito resistance to a bacterial insecticide: sequence and gene expression variations. BMC Genomics 2009;10:551. [PMID: 19930593 PMCID: PMC2799440 DOI: 10.1186/1471-2164-10-551] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2009] [Accepted: 11/21/2009] [Indexed: 12/12/2022]  Open
31
Shubina EA, Ponomareva EV, Glubokov AI. Population genetic structure of walleye pollock Theragra chalcogramma (Gadidae, Pisces) from the Bering Sea and Sea of Okhotsk. Mol Biol 2009. [DOI: 10.1134/s0026893309050161] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
32
Mason RAB, Browning TL, Eldridge MDB. Reduced MHC class II diversity in island compared to mainland populations of the black-footed rock-wallaby (Petrogale lateralis lateralis). CONSERV GENET 2009. [DOI: 10.1007/s10592-009-9993-y] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
33
Kerdelhué C, Zane L, Simonato M, Salvato P, Rousselet J, Roques A, Battisti A. Quaternary history and contemporary patterns in a currently expanding species. BMC Evol Biol 2009;9:220. [PMID: 19732434 PMCID: PMC2753568 DOI: 10.1186/1471-2148-9-220] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2009] [Accepted: 09/04/2009] [Indexed: 11/13/2022]  Open
34
NIELSEN EINARE, HEMMER-HANSEN JAKOB, LARSEN PETERFOGED, BEKKEVOLD DORTE. Population genomics of marine fishes: identifying adaptive variation in space and time. Mol Ecol 2009;18:3128-50. [DOI: 10.1111/j.1365-294x.2009.04272.x] [Citation(s) in RCA: 236] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
35
Neiman M, Olson MS, Tiffin P. Selective histories of poplar protease inhibitors: elevated polymorphism, purifying selection, and positive selection driving divergence of recent duplicates. THE NEW PHYTOLOGIST 2009;183:740-750. [PMID: 19566812 DOI: 10.1111/j.1469-8137.2009.02936.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
36
Barrett LG, Thrall PH, Dodds PN, van der Merwe M, Linde CC, Lawrence GJ, Burdon JJ. Diversity and evolution of effector loci in natural populations of the plant pathogen Melampsora lini. Mol Biol Evol 2009;26:2499-513. [PMID: 19633228 DOI: 10.1093/molbev/msp166] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
37
Jorgensen TH, Emerson BC. RPW8 and resistance to powdery mildew pathogens in natural populations of Arabidopsis lyrata. THE NEW PHYTOLOGIST 2009;182:984-993. [PMID: 19383106 DOI: 10.1111/j.1469-8137.2009.02787.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
38
Garamszegi LZ, de Groot NG, Bontrop RE. Correlated evolution of nucleotide substitution rates and allelic variation in Mhc-DRB lineages of primates. BMC Evol Biol 2009;9:73. [PMID: 19361342 PMCID: PMC2674423 DOI: 10.1186/1471-2148-9-73] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2008] [Accepted: 04/12/2009] [Indexed: 11/10/2022]  Open
39
Pariset L, Joost S, Marsan PA, Valentini A. Landscape genomics and biased FST approaches reveal single nucleotide polymorphisms under selection in goat breeds of North-East Mediterranean. BMC Genet 2009;10:7. [PMID: 19228375 PMCID: PMC2663570 DOI: 10.1186/1471-2156-10-7] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2008] [Accepted: 02/19/2009] [Indexed: 01/18/2023]  Open
40
Zaffarano PL, McDonald BA, Linde CC. Phylogeographical analyses reveal global migration patterns of the barley scald pathogen Rhynchosporium secalis. Mol Ecol 2008;18:279-93. [PMID: 19076278 DOI: 10.1111/j.1365-294x.2008.04013.x] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
41
Cavatorta JR, Savage AE, Yeam I, Gray SM, Jahn MM. Positive Darwinian selection at single amino acid sites conferring plant virus resistance. J Mol Evol 2008;67:551-9. [PMID: 18953590 DOI: 10.1007/s00239-008-9172-7] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2007] [Revised: 09/08/2008] [Accepted: 09/29/2008] [Indexed: 01/26/2023]
42
Obbard DJ, Callister DM, Jiggins FM, Soares DC, Yan G, Little TJ. The evolution of TEP1, an exceptionally polymorphic immunity gene in Anopheles gambiae. BMC Evol Biol 2008;8:274. [PMID: 18840262 PMCID: PMC2576239 DOI: 10.1186/1471-2148-8-274] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2008] [Accepted: 10/07/2008] [Indexed: 01/20/2023]  Open
43
Padhi A, Verghese B. Detecting positively selected codons in the glycoprotein of spring viraemia of carp virus (SVCV) isolates from the USA and China. JOURNAL OF FISH DISEASES 2008;31:785-791. [PMID: 18801064 DOI: 10.1111/j.1365-2761.2008.00938.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
44
Piertney SB, Webster LMI. Characterising functionally important and ecologically meaningful genetic diversity using a candidate gene approach. Genetica 2008;138:419-32. [PMID: 18803023 DOI: 10.1007/s10709-008-9322-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2008] [Accepted: 08/20/2008] [Indexed: 01/13/2023]
45
Nelson L, Anderson S, Archibald AL, Rhind S, Lu ZH, Condie A, McIntyre N, Thompson J, Nenutil R, Vojtesek B, Whitelaw CBA, Little TJ, Hupp T. An animal model to evaluate the function and regulation of the adaptively evolving stress protein SEP53 in oesophageal bile damage responses. Cell Stress Chaperones 2008;13:375-85. [PMID: 18465210 PMCID: PMC2673944 DOI: 10.1007/s12192-008-0037-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2007] [Revised: 03/04/2008] [Accepted: 03/12/2008] [Indexed: 01/19/2023]  Open
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Jang-Liaw NH, Lee TH, Chou WH. Phylogeography of Sylvirana latouchii (Anura, Ranidae) in Taiwan. Zoolog Sci 2008;25:68-79. [PMID: 18275248 DOI: 10.2108/zsj.25.68] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2007] [Accepted: 09/24/2007] [Indexed: 11/17/2022]
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Simões P, Santos J, Fragata I, Mueller LD, Rose MR, Matos M. HOW REPEATABLE IS ADAPTIVE EVOLUTION? THE ROLE OF GEOGRAPHICAL ORIGIN AND FOUNDER EFFECTS IN LABORATORY ADAPTATION. Evolution 2008;62:1817-29. [DOI: 10.1111/j.1558-5646.2008.00423.x] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Namroud MC, Beaulieu J, Juge N, Laroche J, Bousquet J. Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce. Mol Ecol 2008;17:3599-613. [PMID: 18662225 PMCID: PMC2613251 DOI: 10.1111/j.1365-294x.2008.03840.x] [Citation(s) in RCA: 158] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Cohuet A, Krishnakumar S, Simard F, Morlais I, Koutsos A, Fontenille D, Mindrinos M, Kafatos FC. SNP discovery and molecular evolution in Anopheles gambiae, with special emphasis on innate immune system. BMC Genomics 2008;9:227. [PMID: 18489733 PMCID: PMC2405807 DOI: 10.1186/1471-2164-9-227] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2007] [Accepted: 05/19/2008] [Indexed: 01/10/2023]  Open
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Liu X, Fu YX. Summary statistics of neutral mutations in longitudinal DNA samples. Theor Popul Biol 2008;74:56-67. [PMID: 18547598 DOI: 10.1016/j.tpb.2008.04.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2006] [Revised: 02/07/2008] [Accepted: 04/21/2008] [Indexed: 10/22/2022]
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