1
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Wang Z, Ju S, Wang Y, Zhang R, Ma L, Song J, Lin K. The isosbestic point in the Raman spectra of the hydration shell. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 317:124413. [PMID: 38728849 DOI: 10.1016/j.saa.2024.124413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 04/16/2024] [Accepted: 05/05/2024] [Indexed: 05/12/2024]
Abstract
Isosbestic point is often observed in a series of spectra, but their interpretation is still controversial, such as whether the continuum model can produce an isosbestic point. In order to answer this question, the Raman spectra of hydration shell with continuous distribution structure in different ionic aqueous solutions were separated by Raman ratio spectra, and an isosbestic point was successfully observed. Our experimental results show that the continuum model can indeed produce the isosbestic point. In order to deepen the understanding of the isosbestic point, we calculate the first moment of the Raman spectra and conduct molecular dynamics (MD) simulations. Both experimental and theoretical findings indicate that elevated temperatures lead to increased disorder among water molecules within the hydration shell.
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Affiliation(s)
- Zhiqiang Wang
- School of Physics, Xidian University, Xi'an, 710071, P. R. China
| | - Siwen Ju
- School of Physics, Xidian University, Xi'an, 710071, P. R. China
| | - Yuxi Wang
- School of Flexible Electronics (SOFE) & State Key Laboratory of Optoelectronic Materials and Technologies (OEMT), Sun Yat-sen University, Shenzhen, 5181071, P. R. China
| | - Ruiting Zhang
- School of Physics, Xidian University, Xi'an, 710071, P. R. China.
| | - Lin Ma
- School of Physics, Xidian University, Xi'an, 710071, P. R. China
| | - Jiangluqi Song
- School of Physics, Xidian University, Xi'an, 710071, P. R. China
| | - Ke Lin
- School of Physics, Xidian University, Xi'an, 710071, P. R. China; Interdisciplinary Research Center of Smart Sensor, Xidian University, Xi'an, 710071, P. R. China.
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2
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Fransson T, Pettersson LGM. TDDFT and the x-ray absorption spectrum of liquid water: Finding the "best" functional. J Chem Phys 2024; 160:234105. [PMID: 38884399 DOI: 10.1063/5.0209719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Accepted: 06/03/2024] [Indexed: 06/18/2024] Open
Abstract
We investigate the performance of time-dependent density functional theory (TDDFT) for reproducing high-level reference x-ray absorption spectra of liquid water and water clusters. For this, we apply the integrated absolute difference (IAD) metric, previously used for x-ray emission spectra of liquid water [T. Fransson and L. G. M. Pettersson, J. Chem. Theory Comput. 19, 7333-7342 (2023)], in order to investigate which exchange-correlation (xc) functionals yield TDDFT spectra in best agreement to reference, as well as to investigate the suitability of IAD for x-ray absorption spectroscopy spectrum calculations. Considering highly asymmetric and symmetric six-molecule clusters, it is seen that long-range corrected xc-functionals are required to yield good agreement with the reference coupled cluster (CC) and algebraic-diagrammatic construction spectra, with 100% asymptotic Hartree-Fock exchange resulting in the lowest IADs. The xc-functionals with best agreement to reference have been adopted for larger water clusters, yielding results in line with recently published CC theory, but which still show some discrepancies in the relative intensity of the features compared to experiment.
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Affiliation(s)
- Thomas Fransson
- Department of Physics, AlbaNova University Center, Stockholm University, 10961 Stockholm, Sweden
| | - Lars G M Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University, 10961 Stockholm, Sweden
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3
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Nagasaka M. Probing Isolated Water Molecules in Aqueous Acetonitrile Solutions Using Oxygen K-Edge X-ray Absorption Spectroscopy. J Phys Chem Lett 2024:5165-5170. [PMID: 38713030 DOI: 10.1021/acs.jpclett.4c01087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Oxygen K-edge X-ray absorption spectroscopy (XAS) of an aqueous acetonitrile solution exhibited a sharp peak at approximately 537 eV, which was similar to that of water vapor and was not observed in liquid water. The inner-shell spectra of isolated water molecules and water clusters of different sizes surrounded by acetonitrile molecules were obtained by extracting these water structures from the liquid structures of aqueous acetonitrile solutions, as calculated using molecular dynamics simulations. The sharp peak profiles of the O K-edge XAS spectra were derived not from water clusters but from isolated water molecules surrounded by acetonitrile molecules. The present study proposes that isolated water molecules are easily formed in aqueous acetonitrile solutions and that the electronic structures of the isolated water molecules can be analyzed using O K-edge XAS spectra, which separates the contributions of small water clusters.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
- Graduate Institute for Advanced Studies, SOKENDAI, Myodaiji, Okazaki 444-8585, Japan
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4
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De Angelis D, Longetti L, Bonano G, Pelli Cresi JS, Foglia L, Pancaldi M, Capotondi F, Pedersoli E, Bencivenga F, Krstulovic M, Menk RH, D'Addato S, Orlando S, de Simone M, Ingle RA, Bleiner D, Coreno M, Principi E, Chergui M, Masciovecchio C, Mincigrucci R. A sub-100 nm thickness flat jet for extreme ultraviolet to soft X-ray absorption spectroscopy. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:605-612. [PMID: 38592969 DOI: 10.1107/s1600577524001875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 02/26/2024] [Indexed: 04/11/2024]
Abstract
Experimental characterization of the structural, electronic and dynamic properties of dilute systems in aqueous solvents, such as nanoparticles, molecules and proteins, are nowadays an open challenge. X-ray absorption spectroscopy (XAS) is probably one of the most established approaches to this aim as it is element-specific. However, typical dilute systems of interest are often composed of light elements that require extreme-ultraviolet to soft X-ray photons. In this spectral regime, water and other solvents are rather opaque, thus demanding radical reduction of the solvent volume and removal of the liquid to minimize background absorption. Here, we present an experimental endstation designed to operate a liquid flat jet of sub-micrometre thickness in a vacuum environment compatible with extreme ultraviolet/soft XAS measurements in transmission geometry. The apparatus developed can be easily connected to synchrotron and free-electron-laser user-facility beamlines dedicated to XAS experiments. The conditions for stable generation and control of the liquid flat jet are analyzed and discussed. Preliminary soft XAS measurements on some test solutions are shown.
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Affiliation(s)
- Dario De Angelis
- CNR - Istituto Officina dei Materiali (IOM), Basovizza, Area Science Park, 34149 Trieste, Italy
| | - Luca Longetti
- Lausanne Centre for Ultrafast Science, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| | - Gabriele Bonano
- Dipartimento FIM, Università degli Studi di Modena e Reggio Emilia, Via Campi 213/a, 41125 Modena, Italy
| | | | - Laura Foglia
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Matteo Pancaldi
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Flavio Capotondi
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Emanuele Pedersoli
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Filippo Bencivenga
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Marija Krstulovic
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Ralf Hendrik Menk
- Sezione di Trieste, Istituto Nazionale di Fisica Nucleare, Via Valerio 2, 34127 Trieste, Italy
| | - Sergio D'Addato
- Dipartimento FIM, Università degli Studi di Modena e Reggio Emilia, Via Campi 213/a, 41125 Modena, Italy
| | - Stefano Orlando
- ISM-CNR, Trieste Branch, in Basovizza Area Science Park, 34149 Trieste, Italy
| | - Monica de Simone
- CNR - Istituto Officina dei Materiali (IOM), Basovizza, Area Science Park, 34149 Trieste, Italy
| | - Rebecca A Ingle
- Department of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, United Kingdom
| | - Davide Bleiner
- Laboratory for Advanced Analytical Technologies, EMPA, Uberlandstrasse 129, CH-8600 Dübendorf, Switzerland
| | - Marcello Coreno
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Emiliano Principi
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Majed Chergui
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Claudio Masciovecchio
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
| | - Riccardo Mincigrucci
- Elettra-Sincrotrone Trieste, Strada Statale 14-km 163.5, Basovizza, 34149 Trieste, Italy
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5
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Folkestad SD, Paul AC, Paul Née Matveeva R, Coriani S, Odelius M, Iannuzzi M, Koch H. Understanding X-ray absorption in liquid water using triple excitations in multilevel coupled cluster theory. Nat Commun 2024; 15:3551. [PMID: 38670938 PMCID: PMC11053016 DOI: 10.1038/s41467-024-47690-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 04/03/2024] [Indexed: 04/28/2024] Open
Abstract
X-ray absorption (XA) spectroscopy is an essential experimental tool to investigate the local structure of liquid water. Interpretation of the experiment poses a significant challenge and requires a quantitative theoretical description. High-quality theoretical XA spectra require reliable molecular dynamics simulations and accurate electronic structure calculations. Here, we present the first successful application of coupled cluster theory to model the XA spectrum of liquid water. We overcome the computational limitations on system size by employing a multilevel coupled cluster framework for large molecular systems. Excellent agreement with the experimental spectrum is achieved by including triple excitations in the wave function and using molecular structures from state-of-the-art path-integral molecular dynamics. We demonstrate that an accurate description of the electronic structure within the first solvation shell is sufficient to successfully model the XA spectrum of liquid water within the multilevel framework. Furthermore, we present a rigorous charge transfer analysis of the XA spectrum, which is reliable due to the accuracy and robustness of the electronic structure methodology. This analysis aligns with previous studies regarding the character of the prominent features of the XA spectrum of liquid water.
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Affiliation(s)
- Sarai Dery Folkestad
- Department of Chemistry, Norwegian University of Science and Technology, NTNU, 7491, Trondheim, Norway
| | - Alexander C Paul
- Department of Chemistry, Norwegian University of Science and Technology, NTNU, 7491, Trondheim, Norway
| | - Regina Paul Née Matveeva
- Department of Chemistry, Norwegian University of Science and Technology, NTNU, 7491, Trondheim, Norway
| | - Sonia Coriani
- Department of Chemistry, Technical University of Denmark, DTU, 2800, Kongens Lyngby, Denmark
| | - Michael Odelius
- Department of Physics, Stockholm University, 10691, Stockholm, Sweden
| | - Marcella Iannuzzi
- Department of Chemistry, University of Zurich, 8057, Zürich, Switzerland
| | - Henrik Koch
- Department of Chemistry, Norwegian University of Science and Technology, NTNU, 7491, Trondheim, Norway.
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6
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Lin Y, Zhou T, Rosenmann ND, Yu L, Gage TE, Banik S, Neogi A, Chan H, Lei A, Lin XM, Holt M, Arslan I, Wen J. Surface premelting of ice far below the triple point. Proc Natl Acad Sci U S A 2023; 120:e2304148120. [PMID: 37844213 PMCID: PMC10622896 DOI: 10.1073/pnas.2304148120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Accepted: 07/28/2023] [Indexed: 10/18/2023] Open
Abstract
Premelting of ice, a quasi-liquid layer (QLL) at the surface below the melting temperature, was first postulated by Michael Faraday 160 y ago. Since then, it has been extensively studied theoretically and experimentally through many techniques. Existing work has been performed predominantly on hexagonal ice, at conditions close to the triple point. Whether the same phenomenon can persist at much lower pressure and temperature, where stacking disordered ice sublimates directly into water vapor, remains unclear. Herein, we report direct observations of surface premelting on ice nanocrystals below the sublimation temperature using transmission electron microscopy (TEM). Similar to what has been reported on hexagonal ice, a QLL is found at the solid-vapor interface. It preferentially decorates certain facets, and its thickness increases as the phase transition temperature is approached. In situ TEM reveals strong diffusion of the QLL, while electron energy loss spectroscopy confirms its amorphous nature. More significantly, the premelting observed in this work is thought to be related to the metastable low-density ultraviscous water, instead of ambient liquid water as in the case of hexagonal ice. This opens a route to understand premelting and grassy liquid state, far away from the normal water triple point.
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Affiliation(s)
- Yulin Lin
- College of Chemistry and Molecular Sciences, the Institute for Advanced Studies, Wuhan University, Wuhan430072, People's Republic of China
| | - Tao Zhou
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | | | - Lei Yu
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Thomas E. Gage
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Suvo Banik
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Arnab Neogi
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Henry Chan
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Aiwen Lei
- College of Chemistry and Molecular Sciences, the Institute for Advanced Studies, Wuhan University, Wuhan430072, People's Republic of China
| | - Xiao-Min Lin
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Martin Holt
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Ilke Arslan
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
| | - Jianguo Wen
- Center for Nanoscale Materials, Argonne National Laboratory, Lemont, IL60439
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7
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Kumaki F, Nagasaka M, Fukaya R, Okano Y, Yamashita S, Nozawa S, Adachi SI, Adachi JI. Operando time-resolved soft x-ray absorption spectroscopy for photoexcitation processes of metal complexes in solutions. J Chem Phys 2023; 158:104201. [PMID: 36922146 DOI: 10.1063/5.0129814] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023] Open
Abstract
Operando time-resolved soft x-ray absorption spectroscopy (TR-SXAS) is an effective method to reveal the photochemical processes of metal complexes in solutions. In this study, we have developed the TR-SXAS measurement system for observing various photochemical reactions in solutions by the combination of laser pump pulses with soft x-ray probe pulses from the synchrotron radiation. For the evaluation of the developed TR-SXAS system, we have measured nitrogen K-edge x-ray absorption spectroscopy (XAS) spectra of aqueous iron phenanthroline solutions during a photoinduced spin transition process. The decay process of the high spin state to the low spin state in the iron complex has been obtained from the ligand side by N K-edge XAS, and the time constant is close to that obtained from the central metal side by time-resolved Fe K-edge XAS in the previous studies.
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Affiliation(s)
- Fumitoshi Kumaki
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | | | - Ryo Fukaya
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Yasuaki Okano
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Shohei Yamashita
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Shunsuke Nozawa
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Shin-Ichi Adachi
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Jun-Ichi Adachi
- Department of Materials Structure Science, School of High Energy Accelerator Science, SOKENDAI (The Graduate University for Advanced Studies), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
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8
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Kong X, Zhu S, Shavorskiy A, Li J, Liu W, Corral Arroyo P, Signorell R, Wang S, Pettersson JBC. Surface solvation of Martian salt analogues at low relative humidities. ENVIRONMENTAL SCIENCE: ATMOSPHERES 2022; 2:137-145. [PMID: 35419521 PMCID: PMC8929290 DOI: 10.1039/d1ea00092f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Accepted: 01/24/2022] [Indexed: 11/21/2022]
Abstract
Salt aerosols play important roles in many processes related to atmospheric chemistry and the climate systems on both Earth and Mars. Complicated and still poorly understood processes occur on the salt surfaces when interacting with water vapor. In this study, ambient pressure X-ray photoelectron spectroscopy (APXPS) is used to characterize the surface chemical environment of Martian salt analogues originating from saline lakes and playas, as well as their responses to varying relative humidities. Generally, APXPS shows similar ionic compositions to those observed by ion chromatography (IC). However, XPS is a surface-sensitive method while IC is bulk-sensitive and differences are observed for species that preferentially partition to the surface or the bulk. Element-selective surface enhancement of Cl- is observed, likely caused by the presence of SO4 2-. In addition, Mg2+ is concentrated on the surface while Na+ is relatively depleted in the surface layer. Hence, the cations (Na+ and Mg2+) and the anions (Cl- and SO4 2-) show competitive correlations. At elevated relative humidity (RH), no major spectral changes were observed in the XPS results, except for the growth of an oxygen component originating from condensed H2O. Near-edge X-ray absorption fine structure (NEXAFS) measurements show that the magnesium and sodium spectra are sensitive to the presence of water, and the results imply that the surface is fully solvated already at RH = 5%. The surface solvation is also fully reversible as the RH is reduced. No major differences are observed between sample types and sample locations, indicating that the salts originated from saline lakes commonly have solvated surfaces under the environmental conditions on Earth.
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Affiliation(s)
- Xiangrui Kong
- Department of Chemistry and Molecular Biology, Atmospheric Science, University of Gothenburg SE-41296 Gothenburg Sweden
| | - Suyun Zhu
- MAX IV Laboratory, Lund University SE221-00 Lund Sweden
| | | | - Jun Li
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, Northwest University Xi'an 710127 China
| | - Wanyu Liu
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, Northwest University Xi'an 710127 China
| | - Pablo Corral Arroyo
- Department of Chemistry and Applied Biosciences, ETH Zurich Zurich Switzerland
| | - Ruth Signorell
- Department of Chemistry and Applied Biosciences, ETH Zurich Zurich Switzerland
| | - Sen Wang
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, Northwest University Xi'an 710127 China
| | - Jan B C Pettersson
- Department of Chemistry and Molecular Biology, Atmospheric Science, University of Gothenburg SE-41296 Gothenburg Sweden
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9
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Carter-Fenk K, Head-Gordon M. On the choice of reference orbitals for linear-response calculations of solution-phase K-edge X-ray absorption spectra. Phys Chem Chem Phys 2022; 24:26170-26179. [DOI: 10.1039/d2cp04077h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
X-ray absorption spectra of liquids calculated with linear-response theories like TDDFT and CIS are dramatically improved with core-ion reference orbitals.
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Affiliation(s)
- Kevin Carter-Fenk
- Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, CA 94720, USA
| | - Martin Head-Gordon
- Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, CA 94720, USA
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
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10
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Nagasaka M, Kosugi N. Soft X-ray Absorption Spectroscopy for Observing Element-specific Intermolecular Interaction in Solution Chemistry. CHEM LETT 2021. [DOI: 10.1246/cl.200938] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan
- SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki, Aichi 444-8585, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan
- SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki, Aichi 444-8585, Japan
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11
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Abid AR, Reinhardt M, Boudjemia N, Pelimanni E, Milosavljević AR, Saak CM, Huttula M, Björneholm O, Patanen M. The effect of relative humidity on CaCl 2 nanoparticles studied by soft X-ray absorption spectroscopy. RSC Adv 2021; 11:2103-2111. [PMID: 35424180 PMCID: PMC8693708 DOI: 10.1039/d0ra08943e] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Accepted: 12/26/2020] [Indexed: 01/09/2023] Open
Abstract
Ca- and Cl-containing nanoparticles are common in atmosphere, originating for example from desert dust and sea water. The properties and effects on atmospheric processes of these aerosol particles depend on the relative humidity (RH) as they are often both hygroscopic and deliquescent. We present here a study of surface structure of free-flying CaCl2 nanoparticles (CaCl2-NPs) in the 100 nm size regime prepared at different humidity levels (RH: 11-85%). We also created mixed nanoparticles by aerosolizing a solution of CaCl2 and phenylalanine (Phe), which is a hydrophobic amino acid present in atmosphere. Information of hydration state of CaCl2-NPs and production of mixed CaCl2 + Phe nanoparticles was obtained using soft X-ray absorption spectroscopy (XAS) at Ca 2p, Cl 2p, C 1s, and O 1s edges. We also report Ca 2p and Cl 2p X-ray absorption spectra of an aqueous CaCl2 solution. The O 1s X-ray absorption spectra measured from hydrated CaCl2-NPs resemble liquid-like water spectrum, which is heavily influenced by the presence of ions. Core level spectra of Ca2+ and Cl- ions do not show a clear dependence of % RH, indicating that the first coordination shell remains similar in all measured hydrated CaCl2-NPs, but they differ from aqueous solution and solid CaCl2.
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Affiliation(s)
- Abdul Rahman Abid
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
- Molecular and Condensed Matter Physics, Uppsala University Ångströmlaboratoriet 752 37 Uppsala Sweden
| | - Maximilian Reinhardt
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
| | - Nacer Boudjemia
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
| | - Eetu Pelimanni
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
| | | | - Clara-Magdalena Saak
- Molecular and Condensed Matter Physics, Uppsala University Ångströmlaboratoriet 752 37 Uppsala Sweden
| | - Marko Huttula
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
| | - Olle Björneholm
- Molecular and Condensed Matter Physics, Uppsala University Ångströmlaboratoriet 752 37 Uppsala Sweden
| | - Minna Patanen
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu P.O. Box 3000 90570 Oulu Finland +358 46 9691089
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12
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Abstract
The origin of water's anomalies has been a matter of long-standing debate. A two-state model, dating back to Röntgen, relies on the dynamical coexistence of two types of local structures-locally favored tetrahedral structure (LFTS) and disordered normal-liquid structure (DNLS)-in liquid water. Phenomenologically, this model not only explains water's thermodynamic anomalies but also can rationalize the existence of a liquid-liquid critical point (LLCP) if there is a cooperative formation of LFTS. We recently found direct evidence for the coexistence of LFTS and DNLS in the experimental structure factor of liquid water. However, the existence of the LLCP and its impact on water's properties has remained elusive, leaving the origin of water's anomalies unclear. Here we propose a unique strategy to locate the LLCP of liquid water. First, we make a comprehensive analysis of a large set of experimental structural, thermodynamic, and dynamic data based on our hierarchical two-state model. This model predicts that the two thermodynamic and dynamical fluctuation maxima lines should cross at the LLCP if it exists, which we confirm by hundred-microsecond simulations for model waters. Based on recent experimental results of the compressibility and diffusivity measurements in the no man's land, we reveal that the two lines cross around 184 K and 173 MPa for real water, suggesting the presence of the LLCP around there. Nevertheless, we find that the criticality is almost negligible in the experimentally accessible region of liquid water because it is too far from the LLCP. Our findings would provide a clue to settle the long-standing debate.
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13
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Nagasaka M, Iwayama H. Photoelectron based soft x-ray detector for removing high order x rays. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2020; 91:083103. [PMID: 32872951 DOI: 10.1063/5.0011302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 07/18/2020] [Indexed: 06/11/2023]
Abstract
Soft x-ray absorption spectroscopy (XAS) in the low energy region below 200 eV is important to investigate chemical and biological phenomena under an atmospheric condition since it covers K-edges of Li and B and L-edges of Si, P, S, and Cl. Monochromatic soft x rays usually include not only first order x rays but also high order x rays due to the high order diffraction of a plane grating monochromator. It is difficult to measure XAS in the low energy region under an atmospheric helium condition since the transmitted soft x rays mostly consist of the high order x rays due to the low transmission of the first order x rays. In this study, we have developed a photoelectron based soft x-ray (PBSX) detector, where the Au 4f photoelectrons emitted by the first order x rays are separated from those by the high order x rays using a difference in kinetic energies of photoelectrons. By using the PBSX detector, we have successfully obtained Si L-edge XAS spectra of the SiC and polymer/SiC films that mainly include the first order x rays by removing the major contributions of the second order x rays at the C K-edge and the fifth order x rays at the O K-edge. In the future, several physical, chemical, and biological phenomena in solution will be investigated by XAS in the low energy region with the PBSX detector.
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Affiliation(s)
| | - Hiroshi Iwayama
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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14
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Nagasaka M. Soft X-ray absorption spectroscopy in the low-energy region explored using an argon gas window. JOURNAL OF SYNCHROTRON RADIATION 2020; 27:959-962. [PMID: 33566004 PMCID: PMC7336171 DOI: 10.1107/s1600577520005883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 04/28/2020] [Indexed: 06/12/2023]
Abstract
The soft X-ray region below 200 eV is important for investigating chemical and biological phenomena since it covers K-edges of Li and B and L-edges of Si, P, S and Cl. Helium gas is generally used as the soft X-ray transmission window for soft X-ray absorption spectroscopy (XAS) under atmospheric conditions. However, the helium gas window cannot be applied to XAS in the low-energy region since transmitted soft X-rays mostly consist of high-order X-rays due to the low transmission of first-order X-rays. In this study, the argon gas window is proposed as a new soft X-ray transmission window in the low-energy region. High-order X-rays are removed by the absorption of the Ar L-edge (240 eV), and first-order X-rays become the major contribution of transmitted soft X-rays in the low-energy region. Under atmospheric argon conditions, the double-excitation Rydberg series of helium gas (60 eV), Si L-edge XAS of an Si3N4 membrane (100 eV) and S L-edge XAS of dimethyl sulfoxide gas (170 eV) are successfully measured, indicating that the argon gas window is effective for soft X-ray transmission in the low-energy region from 60 eV to 240 eV.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
- SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki 444-8585, Japan
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15
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Abstract
We review oxygen K-edge X-ray absorption spectra of both molecules and solids. We start with an overview of the main experimental aspects of oxygen K-edge X-ray absorption measurements including X-ray sources, monochromators, and detection schemes. Many recent oxygen K-edge studies combine X-ray absorption with time and spatially resolved measurements and/or operando conditions. The main theoretical and conceptual approximations for the simulation of oxygen K-edges are discussed in the Theory section. We subsequently discuss oxygen atoms and ions, binary molecules, water, and larger molecules containing oxygen, including biomolecular systems. The largest part of the review deals with the experimental results for solid oxides, starting from s- and p-electron oxides. Examples of theoretical simulations for these oxides are introduced in order to show how accurate a DFT description can be in the case of s and p electron overlap. We discuss the general analysis of the 3d transition metal oxides including discussions of the crystal field effect and the effects and trends in oxidation state and covalency. In addition to the general concepts, we give a systematic overview of the oxygen K-edges element by element, for the s-, p-, d-, and f-electron systems.
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Affiliation(s)
- Federica Frati
- Inorganic
chemistry and catalysis, Debye Institute for Nanomaterials Science, Utrecht University, 3584CG Utrecht, The Netherlands
| | | | - Frank M. F. de Groot
- Inorganic
chemistry and catalysis, Debye Institute for Nanomaterials Science, Utrecht University, 3584CG Utrecht, The Netherlands
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16
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Buttersack T, Mason PE, Jungwirth P, Schewe HC, Winter B, Seidel R, McMullen RS, Bradforth SE. Deeply cooled and temperature controlled microjets: Liquid ammonia solutions released into vacuum for analysis by photoelectron spectroscopy. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2020; 91:043101. [PMID: 32357686 DOI: 10.1063/1.5141359] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Accepted: 03/17/2020] [Indexed: 06/11/2023]
Abstract
A versatile, temperature controlled apparatus is presented, which generates deeply cooled liquid microjets of condensed gases, expelling them via a small aperture into vacuum for use in photoelectron spectroscopy (PES). The functionality of the design is demonstrated by temperature- and concentration-dependent PES measurements of liquid ammonia and solutions of KI and NH4I in liquid ammonia. The experimental setup is not limited to the usage of liquid ammonia solutions solely.
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Affiliation(s)
- Tillmann Buttersack
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610 Prague 6, Czech Republic
| | - Philip E Mason
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610 Prague 6, Czech Republic
| | - Pavel Jungwirth
- Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nam. 2, 16610 Prague 6, Czech Republic
| | - H Christian Schewe
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Molekülphysik, Faradayweg 4-6, 14195 Berlin, Germany
| | - Bernd Winter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Molekülphysik, Faradayweg 4-6, 14195 Berlin, Germany
| | - Robert Seidel
- Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany and Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany
| | - Ryan S McMullen
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, USA
| | - Stephen E Bradforth
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, USA
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17
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Ansari N, Onat B, Sosso GC, Hassanali A. Insights into the Emerging Networks of Voids in Simulated Supercooled Water. J Phys Chem B 2020; 124:2180-2190. [PMID: 32032486 DOI: 10.1021/acs.jpcb.9b10144] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The structural evolution of supercooled liquid water as we approach the glass transition temperature continues to be an active area of research. Here, we use molecular dynamics simulations of TIP4P/ice water to study the changes in the connected regions of empty space within the liquid, which we investigate using the Voronoi-voids network. We observe two important features: supercooling enhances the fraction of nonspherical voids and different sizes of voids tend to cluster forming a percolating network. By examining order parameters such as the local structure index (LSI), tetrahedrality and topological defects, we show that water molecules near large void clusters tend to be slightly more tetrahedral than those near small voids, with a lower population of under- and overcoordinated defects. We show further that the distribution of closed rings of water molecules around small and large void clusters maintain a balance between 6 and 7 membered rings. Our results highlight the changes of the dual voids and water network as a structural hallmark of supercooling and provide insights into the molecular origins of cooperative effects underlying density fluctuations on the subnanometer and nanometer length scale. In addition, the percolation of the voids and the hydrogen bond network around the voids may serve as useful order parameters to investigate density fluctuations in supercooled water.
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Affiliation(s)
- Narjes Ansari
- The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151 Trieste, Italy
| | - Berk Onat
- Department of Chemistry and Centre for Scientific Computing, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.,School of Engineering, University of Warwick, Gibbet Hill, Coventry CV4 7AL, United Kingdom
| | - Gabriele C Sosso
- Department of Chemistry and Centre for Scientific Computing, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Ali Hassanali
- The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151 Trieste, Italy
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18
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Dupuy R, Féraud G, Bertin M, Romanzin C, Philippe L, Putaud T, Michaut X, Cimino R, Baglin V, Fillion JH. Desorption of neutrals, cations, and anions from core-excited amorphous solid water. J Chem Phys 2020; 152:054711. [PMID: 32035460 DOI: 10.1063/1.5133156] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Core-excitation of water ice releases many different molecules and ions in the gas phase. Studying these desorbed species and the underlying desorption mechanisms can provide useful information on the effects of x-ray irradiation in ice. We report a detailed study of the x-ray induced desorption of a number of neutral, cationic, and anionic species from amorphous solid water. We discuss the desorption mechanisms and the relative contributions of Auger and secondary electrons (x-ray induced electron stimulated desorption) and initial excitation (direct desorption) as well as the role of photochemistry. Anions are shown to desorb not just through processes linked with secondary electrons but also through direct dissociation of the core-excited molecule. The desorption spectra of oxygen ions (O+, OH+, H2O+, O-, and OH-) give a new perspective on their previously reported very low desorption yields for most types of irradiations of water, showing that they mostly originate from the dissociation of photoproducts such as H2O2.
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Affiliation(s)
- R Dupuy
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - G Féraud
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - M Bertin
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - C Romanzin
- Laboratoire de Chimie Physique, CNRS, univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - L Philippe
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - T Putaud
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - X Michaut
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
| | - R Cimino
- Laboratori Nazionali di Frascati (LNF)-INFN, I-00044 Frascati, Italy
| | - V Baglin
- CERN, CH-1211 Geneva 23, Switzerland
| | - J-H Fillion
- Sorbonne Université, Observatoire de Paris, Université PSL, CNRS, LERMA, F-75005 Paris, France
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19
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Nagasaka M, Yuzawa H, Kosugi N. Soft X-ray Absorption Spectroscopy of Liquids for Understanding Chemical Processes in Solution. ANAL SCI 2020; 36:95-105. [PMID: 31708561 DOI: 10.2116/analsci.19r005] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Soft X-ray absorption spectroscopy (XAS) involving excitation processes of a core electron to unoccupied states is an effective method to study local structures around excited C, N, and O atoms in liquid samples. Since soft X-rays are strongly absorbed by air and liquid itself, we have developed transmission-type liquid flow cells, where the absorbance of liquid samples can be easily reduced and optimized by controlling the liquid thickness. By using the transmission-mode XAS techniques, we have investigated local structures of several liquid samples such as concentration dependence of aqueous pyridine solutions and unexpected temperature-dependent structural changes in liquid benzene from the precise energy shift measurements in XAS spectra with the help of molecular dynamics simulation and inner-shell calculations. These XAS techniques are also applied to in situ/operando observation of chemical processes in solutions such as catalytic and electrochemical reactions.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science.,SOKENDAI (The Graduate University for Advanced Studies)
| | | | - Nobuhiro Kosugi
- Institute for Molecular Science.,SOKENDAI (The Graduate University for Advanced Studies)
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20
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Orlando F, Artiglia L, Yang H, Kong X, Roy K, Waldner A, Chen S, Bartels-Rausch T, Ammann M. Disordered Adsorbed Water Layers on TiO 2 Nanoparticles under Subsaturated Humidity Conditions at 235 K. J Phys Chem Lett 2019; 10:7433-7438. [PMID: 31725306 DOI: 10.1021/acs.jpclett.9b02779] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The interaction of water with TiO2 is of substantial scientific and technological interest as it determines the activity of TiO2 in photocatalytic and environmental applications in nanoparticle suspensions in water, in complex appliances, or in pure form interacting with water vapor. The influence of TiO2 nanoparticles on the hydrogen bonding structure of water molecules is an important factor that controls hydration of other species, reactions, or nucleation processes. We use a combination of ambient-pressure X-ray photoelectron spectroscopy and electron yield near-edge X-ray absorption fine structure (NEXAFS) spectroscopy at the oxygen K-edge to investigate the hydrogen bonding structure of adsorbed water on titania nanoparticles in equilibrium with nearly saturated water vapor at 235 K. The results clearly show that the net NEXAFS spectrum of adsorbed water resembles that of liquid, disordered water at 235 K, a temperature at which both homogeneous and heterogeneous freezing of bulk water is anticipated.
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Affiliation(s)
- Fabrizio Orlando
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
| | - Luca Artiglia
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
| | - Huanyu Yang
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
- Institute of Atmospheric and Climate Science , ETH Zürich , 8092 Zürich , Switzerland
| | - Xiangrui Kong
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
- Department of Chemistry and Molecular Biology , University of Gothenburg , 41296 Gothenburg , Sweden
| | - Kanak Roy
- Institute for Chemical and Bioengineering , ETH Zürich , 8093 Zürich , Switzerland
| | - Astrid Waldner
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
| | - Shuzhen Chen
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
| | - Thorsten Bartels-Rausch
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
| | - Markus Ammann
- Laboratory of Environmental Chemistry , Paul Scherrer Institut , 5232 Villigen , Switzerland
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21
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Nagasaka M, Yuzawa H, Takada N, Aoyama M, Rühl E, Kosugi N. Laminar flow in microfluidics investigated by spatially-resolved soft X-ray absorption and infrared spectroscopy. J Chem Phys 2019; 151:114201. [PMID: 31542036 DOI: 10.1063/1.5115191] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The application of soft X-ray absorption spectroscopy (XAS) to liquid cells based on microfluidics for chemical state analysis of light elements is much more difficult than hard X-ray absorption since soft X-rays cannot deeply penetrate a microfluidic cell. In this study, we have newly developed a microfluidic cell for spatially resolved XAS, where a 100 nm thick Si3N4 membrane is used for the measurement window to transmit soft X-rays for keeping the microfluidic flow at a width and depth of 50 µm. The π* peak of pyridine near the N K-edge XAS shows characteristic energy shifts near the liquid-liquid interface in a laminar flow of pyridine and water. The distributions of the molar fractions of pyridine and water near the liquid-liquid interface have been determined from the energy shifts of the π* peak probed at different geometric positions, where pyridine is mixed in the water part of the laminar flow and vice versa. The spatial distribution of both species has also been studied by infrared microscopy, using the same microfluidic setup. The present work clearly shows that these spectroscopic techniques are easily applicable to chemical and biological reactions prepared by microfluidics.
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Affiliation(s)
| | - Hayato Yuzawa
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Noriko Takada
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Masaki Aoyama
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Eckart Rühl
- Physikalische Chemie, Freie Universität Berlin, Arnimallee 22, D-14195 Berlin, Germany
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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22
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Do X-ray spectroscopies provide evidence for continuous distribution models of water at ambient conditions? Proc Natl Acad Sci U S A 2019; 116:17156-17157. [PMID: 31431525 PMCID: PMC6717290 DOI: 10.1073/pnas.1905756116] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
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23
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Camisasca G, Schlesinger D, Zhovtobriukh I, Pitsevich G, Pettersson LGM. A proposal for the structure of high- and low-density fluctuations in liquid water. J Chem Phys 2019; 151:034508. [PMID: 31325915 DOI: 10.1063/1.5100875] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Based on recent experimental data that can be interpreted as indicating the presence of specific structures in liquid water, we build and optimize two structural models which we compare with the available experimental data. To represent the proposed high-density liquid structures, we use a model consisting of chains of water molecules, and for low-density liquid, we investigate fused dodecahedra as templates for tetrahedral fluctuations. The computed infrared spectra of the models are in very good agreement with the extracted experimental spectra for the two components, while the extracted structures from molecular dynamics (MD) simulations give spectra that are intermediate between the experimentally derived spectra. Computed x-ray absorption and emission spectra as well as the O-O radial distribution functions of the proposed structures are not contradicted by experiment. The stability of the proposed dodecahedral template structures is investigated in MD simulations by seeding the starting structure, and remnants found to persist on an ∼30 ps time scale. We discuss the possible significance of such seeds in simulations and whether they can be viable candidates as templates for structural fluctuations below the compressibility minimum of liquid water.
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Affiliation(s)
- Gaia Camisasca
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | - Daniel Schlesinger
- Department of Environmental Science and Analytical Chemistry & Bolin Centre for Climate Research, Stockholm University, 114 18 Stockholm, Sweden
| | - Iurii Zhovtobriukh
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | - George Pitsevich
- Belarusian State University, Nezavisimosti Ave., 4, 220030 Minsk, Belarus
| | - Lars G M Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
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24
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Yamazoe K, Miyawaki J, Niwa H, Nilsson A, Harada Y. Measurements of ultrafast dissociation in resonant inelastic x-ray scattering of water. J Chem Phys 2019; 150:204201. [PMID: 31153206 DOI: 10.1063/1.5081886] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
There has been a discussion on the interpretation of the resonant inelastic x-ray scattering (RIXS) spectra of liquid water in terms of either different structural environments or that core hole dynamics can generate well-resolved dissociative spectral components. We have used RIXS with high resolution in the OH stretch vibration energy part, at extremely high overtones going toward the continuum of full OH bond breakage, to identify the amount of dissociative contributions in the valence band RIXS spectra at different excitation energies. We observe that at low excitation energies, corresponding to population of states with strongly antibonding character, the valence band RIXS spectra have a large contribution from a well-resolved dissociative feature. Instead, at higher excitations, this spectral component diminishes and becomes a weak structure on the high-energy side of one of the spectral peaks related to the 1b1 state from tetrahedral configurations. This result brings both interpretations to be essential for the understanding of RIXS spectra of liquid water.
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Affiliation(s)
- Kosuke Yamazoe
- Institute for Solid State Physics (ISSP), The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Jun Miyawaki
- Institute for Solid State Physics (ISSP), The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Hideharu Niwa
- Institute for Solid State Physics (ISSP), The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Anders Nilsson
- Department of Physics, AlbaNova University Center, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Yoshihisa Harada
- Institute for Solid State Physics (ISSP), The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
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25
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Martelli F. Unravelling the contribution of local structures to the anomalies of water: The synergistic action of several factors. J Chem Phys 2019; 150:094506. [PMID: 30849899 DOI: 10.1063/1.5087471] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We investigate the microscopic origin of water's anomalies by inspecting the hydrogen bond network (HBN) and the spatial organization of low-density-liquid (LDL) like and high-density-liquid (HDL) like environments. Specifically, we simulate-via classical molecular dynamics simulations-the isobaric cooling of a sample composed of 512 water molecules from ambient to deeply undercooled conditions at three pressures, namely, 1 bar, 400 bars, and 1000 bars. In correspondence with the Widom line (WL), (i) the HDL-like dominating cluster undergoes fragmentation caused by the percolation of LDL-like aggregates following a spinodal-like kinetics; (ii) such fragmentation always occurs at a "critical" concentration of ∼20%-30% in LDL; (iii) the HBN within LDL-like environments is characterized by an equal number of pentagonal and hexagonal rings that create a state of maximal frustration between a configuration that promotes crystallization (hexagonal ring) and a configuration that hinders it (pentagonal ring); (iv) the spatial organization of HDL-like environments shows a marked variation. Moreover, the inspection of the global symmetry shows that the intermediate-range order decreases in correspondence with the WL and such a decrease becomes more pronounced upon increasing the pressure, hence supporting the hypothesis of a liquid-liquid critical point. Our results reveal and rationalize the complex microscopic origin of water's anomalies as the cooperative effect of several factors acting synergistically. Beyond implications for water, our findings may be extended to other materials displaying anomalous behaviours.
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Affiliation(s)
- Fausto Martelli
- IBM Research, Hartree Centre, Daresbury WA4 4AD, United Kingdom
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26
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Zhovtobriukh I, Norman P, Pettersson LGM. X-ray absorption spectrum simulations of hexagonal ice. J Chem Phys 2019; 150:034501. [DOI: 10.1063/1.5078385] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Affiliation(s)
- Iurii Zhovtobriukh
- FYSIKUM, Stockholm University, AlbaNova University Center, SE-106 91 Stockholm, Sweden
| | - Patrick Norman
- Department of Theoretical Chemistry and Biology, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-106 91 Stockholm, Sweden
| | - Lars G. M. Pettersson
- FYSIKUM, Stockholm University, AlbaNova University Center, SE-106 91 Stockholm, Sweden
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27
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Shi R, Russo J, Tanaka H. Common microscopic structural origin for water's thermodynamic and dynamic anomalies. J Chem Phys 2018; 149:224502. [PMID: 30553247 DOI: 10.1063/1.5055908] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Water displays a vast array of unique properties, known as water's anomalies, whose origin remains subject to hot debate. Our aim in this article is to provide a unified microscopic physical picture of water's anomalies in terms of locally favored structures, encompassing both thermodynamic and dynamic anomalies, which are often attributed to different origins. We first identify locally favored structures via a microscopic structural descriptor that measures local translational order and provide direct evidence that they have a hierarchical impact on the anomalies. At each state point, the strength of thermodynamic anomalies is directly proportional to the amount of locally favored structures, while the dynamic properties of each molecule depend on the local structure surrounding both itself and its nearest neighbors. To incorporate this, we develop a novel hierarchical two-state model. We show by extensive simulations of two popular water models that both thermodynamic and kinetic anomalies can be almost perfectly explained by the temperature and pressure dependence of these local and non-local versions of the same structural descriptor, respectively. Moreover, our scenario makes three unique predictions in supercooled water, setting it apart from other scenarios: (1) Presence of an "Arrhenius-to-Arrhenius" crossover upon cooling, as the origin of the apparent "fragile-to-strong" transition; (2) maximum of dynamic heterogeneity around 20 K below the Widom line and far above the glass transition; (3) violation of the Stokes-Einstein-Debye relation at ∼2T g, rather than 1.2T g typical of normal glass-formers. These predictions are verified by recent measurement of water's diffusion at very low temperatures (point 1) and discoveries from our extensive simulations (points 2-3). We suggest that the same scenario may generally apply to water-like anomalies in liquids tending to form locally favored structures, including not only other important tetrahedral liquids such as silicon, germanium, and silica, but also metallic and chalcogenide liquids.
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Affiliation(s)
- Rui Shi
- Department of Fundamental Engineering, Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
| | - John Russo
- Department of Fundamental Engineering, Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
| | - Hajime Tanaka
- Department of Fundamental Engineering, Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
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28
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Perera SD, Shokatian S, Wang J, Urquhart SG. Temperature Dependence in the NEXAFS Spectra of n-Alkanes. J Phys Chem A 2018; 122:9512-9517. [DOI: 10.1021/acs.jpca.8b10713] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sahan D. Perera
- Department of Chemistry, University of Saskatchewan, Saskatoon, Treaty Six Territory, Saskatchewan S7N 5C9, Canada
| | - Sadegh Shokatian
- Department of Chemistry, University of Saskatchewan, Saskatoon, Treaty Six Territory, Saskatchewan S7N 5C9, Canada
| | - Jian Wang
- Canadian Light Source, University of Saskatchewan, Saskatoon, Saskatchewan S7N 0X4, Canada
| | - Stephen G. Urquhart
- Department of Chemistry, University of Saskatchewan, Saskatoon, Treaty Six Territory, Saskatchewan S7N 5C9, Canada
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29
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Waldner A, Artiglia L, Kong X, Orlando F, Huthwelker T, Ammann M, Bartels-Rausch T. Pre-melting and the adsorption of formic acid at the air-ice interface at 253 K as seen by NEXAFS and XPS. Phys Chem Chem Phys 2018; 20:24408-24417. [PMID: 30221299 DOI: 10.1039/c8cp03621g] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Interactions between trace gases and ice are important in environmental chemistry and for Earth's climate. In particular, the adsorption of trace gases to ice surfaces at temperatures approaching the melting point has raised interest in the past, because of the prevailing pre-melting. Here, we present Near Edge X-ray Absorption Fine Structure (NEXAFS) spectroscopy data at ambient partial pressure of water to better define the onset temperature of pre-melting at the interfacial region of ice. Further, this study directly compares the interaction between an organic acid common in the atmosphere, formic acid, and that of an aliphatic carbon with ice at 253 K. It makes use of X-ray Photoelectron Spectroscopy (XPS) with its inherent narrow probing depth covering both the surface and near-surface bulk region when detecting electrons. We use the tender X-ray range for excitation to locate the organic species within the interfacial region with an extended probing depth compared to published XPS work. Electron kinetic energy dependent C1s photoemission data indicate that, at low coverage of a few 1014 molecules cm-2, the presence of formic acid is restricted to the upper ice layers of the interfacial region. Increasing the dosage, formic acid penetrates 6-7 nm into the air-ice interface. The presence of the more hydrophobic aliphatic carbon is restricted to the upper ice monolayers. This direct comparison of an organic acid with an aliphatic compound confirms the emerging picture where solutes enter the interfacial region of ice at a depth related to their specific tendency to form solvation shells.
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Affiliation(s)
- Astrid Waldner
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
| | - Luca Artiglia
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
| | - Xiangrui Kong
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
| | - Fabrizio Orlando
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
| | - Thomas Huthwelker
- Swiss Light Source (SLS), Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland
| | - Markus Ammann
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
| | - Thorsten Bartels-Rausch
- Laboratory of Environmental Chemistry, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.
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30
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Origin of the emergent fragile-to-strong transition in supercooled water. Proc Natl Acad Sci U S A 2018; 115:9444-9449. [PMID: 30181283 DOI: 10.1073/pnas.1807821115] [Citation(s) in RCA: 76] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Liquids can be broadly classified into two categories, fragile and strong ones, depending on how their dynamical properties change with temperature. The dynamics of a strong liquid obey the Arrhenius law, whereas the fragile one displays a super-Arrhenius law, with a much steeper slowing down upon cooling. Recently, however, it was discovered that many materials such as water, oxides, and metals do not obey this simple classification, apparently exhibiting a fragile-to-strong transition far above [Formula: see text] Such a transition is particularly well known for water, and it is now regarded as one of water's most important anomalies. This phenomenon has been attributed to either an unusual glass transition behavior or the crossing of a Widom line emanating from a liquid-liquid critical point. Here by computer simulations of two popular water models and through analyses of experimental data, we show that the emergent fragile-to-strong transition is actually a crossover between two Arrhenius regimes with different activation energies, which can be naturally explained by a two-state description of the dynamics. Our finding provides insight into the fragile-to-strong transition observed in a wide class of materials.
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31
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Zhovtobriukh I, Besley NA, Fransson T, Nilsson A, Pettersson LGM. Relationship between x-ray emission and absorption spectroscopy and the local H-bond environment in water. J Chem Phys 2018; 148:144507. [DOI: 10.1063/1.5009457] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Affiliation(s)
- Iurii Zhovtobriukh
- FYSIKUM, Stockholm University, Albanova University Center, SE-106 91 Stockholm, Sweden
| | - Nicholas A. Besley
- School of Chemistry, The University of Nottingham, University Park, Nottingham NG72RD, United Kingdom
| | - Thomas Fransson
- Stanford PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025,
USA
| | - Anders Nilsson
- FYSIKUM, Stockholm University, Albanova University Center, SE-106 91 Stockholm, Sweden
| | - Lars G. M. Pettersson
- FYSIKUM, Stockholm University, Albanova University Center, SE-106 91 Stockholm, Sweden
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32
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Affiliation(s)
- Rui Shi
- Department of Fundamental Engineering, Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
| | - Hajime Tanaka
- Department of Fundamental Engineering, Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
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33
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Nagasaka M, Yuzawa H, Kosugi N. Interaction between Water and Alkali Metal Ions and Its Temperature Dependence Revealed by Oxygen K-Edge X-ray Absorption Spectroscopy. J Phys Chem B 2017; 121:10957-10964. [PMID: 29131955 DOI: 10.1021/acs.jpcb.7b09789] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Interaction between water molecules and alkali metal ions in aqueous salt solutions has been studied by the oxygen K-edge soft X-ray absorption spectroscopy (XAS) in transmission mode. In the measurement of several alkali halide aqueous solutions with different alkali chlorides (Li, Na, and K) and different sodium halides (Cl, Br, and I), the pre-edge component arising from the hydration water molecules shows a blue shift in peak energy as strongly depending on cations but not on anions. In the temperature dependent measurement, the pre-edge component arising from water molecules beyond the first hydration shell shows the same behavior as that of pure liquid water. On the other hand, the pre-edge component arising from water molecules in the first hydration shell of Li+ ions is not evidently dependent on the temperature, indicating that the hydration water molecules are more strongly bound with Li+ ions than the other water molecules. These experimental results are supported by the results of radial distribution functions of the first hydration shell and their temperature dependence, evaluated by molecular dynamics simulations.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585, Japan
| | - Hayato Yuzawa
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585, Japan
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34
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Harada Y, Miyawaki J, Niwa H, Yamazoe K, Pettersson LGM, Nilsson A. Probing the OH Stretch in Different Local Environments in Liquid Water. J Phys Chem Lett 2017; 8:5487-5491. [PMID: 29108417 DOI: 10.1021/acs.jpclett.7b02060] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We use resonant inelastic X-ray scattering (RIXS) to resolve vibrational losses corresponding to the OH stretch where the X-ray absorption process allows us to selectively probe different structural subensembles in liquid water. The results point to a unified interpretation of X-ray and vibrational spectroscopic data in line with a picture of two classes of structural environments in the liquid at ambient conditions with predominantly close-packed high-density liquid (HDL) and occasional local fluctuations into strongly tetrahedral low-density liquid (LDL).
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Affiliation(s)
- Y Harada
- Institute for Solid State Physics, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
- Synchrotron Radiation Research Organization, The University of Tokyo , Tatsuno, Hyogo 679-5165, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - J Miyawaki
- Institute for Solid State Physics, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
- Synchrotron Radiation Research Organization, The University of Tokyo , Tatsuno, Hyogo 679-5165, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - H Niwa
- Institute for Solid State Physics, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
- Synchrotron Radiation Research Organization, The University of Tokyo , Tatsuno, Hyogo 679-5165, Japan
| | - K Yamazoe
- Institute for Solid State Physics, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo , 5-1-5, Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - L G M Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University , SE-106 91 Stockholm, Sweden
| | - A Nilsson
- Department of Physics, AlbaNova University Center, Stockholm University , SE-106 91 Stockholm, Sweden
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35
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Kong X, Waldner A, Orlando F, Artiglia L, Huthwelker T, Ammann M, Bartels-Rausch T. Coexistence of Physisorbed and Solvated HCl at Warm Ice Surfaces. J Phys Chem Lett 2017; 8:4757-4762. [PMID: 28902513 DOI: 10.1021/acs.jpclett.7b01573] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The interfacial ionization of strong acids is an essential factor of multiphase and heterogeneous chemistry in environmental science, cryospheric science, catalysis research and material science. Using near ambient pressure core level X-ray photoelectron spectroscopy, we directly detected a low surface coverage of adsorbed HCl at 253 K in both molecular and dissociated states. Depth profiles derived from XPS data indicate the results as physisorbed molecular HCl at the outermost ice surface and dissociation occurring upon solvation deeper in the interfacial region. Complementary X-ray absorption measurements confirm that the presence of Cl- ions induces significant changes to the hydrogen bonding network in the interfacial region. This study gives clear evidence for nonuniformity across the air-ice interface and questions the use of acid-base concepts in interfacial processes.
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Affiliation(s)
- Xiangrui Kong
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
- Department of Chemistry and Molecular Biology, University of Gothenburg , SE-41296 Gothenburg, Sweden
| | - Astrid Waldner
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
- Department of Environmental System Science, ETH Zürich , CH-8092 Zürich, Switzerland
| | - Fabrizio Orlando
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
| | - Luca Artiglia
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
| | - Thomas Huthwelker
- Swiss Light Source, Paul Scherrer Institute , CH-5232, Villigen PSI, Switzerland
| | - Markus Ammann
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
| | - Thorsten Bartels-Rausch
- Laboratory of Environmental Chemistry, Paul Scherrer Institut , CH-5232 Villigen PSI, Switzerland
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36
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Kostko O, Xu B, Jacobs MI, Ahmed M. Soft X-ray spectroscopy of nanoparticles by velocity map imaging. J Chem Phys 2017; 147:013931. [DOI: 10.1063/1.4982822] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- O. Kostko
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - B. Xu
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - M. I. Jacobs
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - M. Ahmed
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
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37
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Fransson T, Harada Y, Kosugi N, Besley NA, Winter B, Rehr JJ, Pettersson LGM, Nilsson A. X-ray and Electron Spectroscopy of Water. Chem Rev 2016; 116:7551-69. [PMID: 27244473 DOI: 10.1021/acs.chemrev.5b00672] [Citation(s) in RCA: 113] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Here we present an overview of recent developments of X-ray and electron spectroscopy to probe water at different temperatures. Photon-induced ionization followed by detection of electrons from either the O 1s level or the valence band is the basis of photoelectron spectroscopy. Excitation between the O 1s and the unoccupied states or occupied states is utilized in X-ray absorption and X-ray emission spectroscopies. These techniques probe the electronic structure of the liquid phase and show sensitivity to the local hydrogen-bonding structure. Both experimental aspects related to the measurements and theoretical simulations to assist in the interpretation are discussed in detail. Different model systems are presented such as the different bulk phases of ice and various adsorbed monolayer structures on metal surfaces.
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Affiliation(s)
- Thomas Fransson
- Department of Physics, Chemistry and Biology, Linköping University , S-581 83 Linköping, Sweden
| | - Yoshihisa Harada
- Institute for Solid State Physics (ISSP), The University of Tokyo , Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan
| | - Nicholas A Besley
- Department of Physical and Theoretical Chemistry, School of Chemistry, The University of Nottingham , University Park, Nottingham NG7 2RD, United Kingdom
| | - Bernd Winter
- Institute of Methods for Material Development, Helmholtz Center Berlin , Albert-Einstein-Strasse 15, D-12489 Berlin, Germany
| | - John J Rehr
- Department of Physics, University of Washington , Seattle, Washington 98195, United States
| | - Lars G M Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University , S-106 91 Stockholm, Sweden
| | - Anders Nilsson
- Department of Physics, AlbaNova University Center, Stockholm University , S-106 91 Stockholm, Sweden
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38
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Demontis P, Gulín-González J, Masia M, Sant M, Suffritti GB. The interplay between dynamic heterogeneities and structure of bulk liquid water: A molecular dynamics simulation study. J Chem Phys 2016; 142:244507. [PMID: 26133441 DOI: 10.1063/1.4922930] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In order to study the interplay between dynamical heterogeneities and structural properties of bulk liquid water in the temperature range 130-350 K, thus including the supercooled regime, we use the explicit trend of the distribution functions of some molecular properties, namely, the rotational relaxation constants, the atomic mean-square displacements, the relaxation of the cross correlation functions between the linear and squared displacements of H and O atoms of each molecule, the tetrahedral order parameter q and, finally, the number of nearest neighbors (NNs) and of hydrogen bonds (HBs) per molecule. Two different potentials are considered: TIP4P-Ew and a model developed in this laboratory for the study of nanoconfined water. The results are similar for the dynamical properties, but are markedly different for the structural characteristics. In particular, for temperatures higher than that of the dynamic crossover between "fragile" (at higher temperatures) and "strong" (at lower temperatures) liquid behaviors detected around 207 K, the rotational relaxation of supercooled water appears to be remarkably homogeneous. However, the structural parameters (number of NNs and of HBs, as well as q) do not show homogeneous distributions, and these distributions are different for the two water models. Another dynamic crossover between "fragile" (at lower temperatures) and "strong" (at higher temperatures) liquid behaviors, corresponding to the one found experimentally at T(∗) ∼ 315 ± 5 K, was spotted at T(∗) ∼ 283 K and T(∗) ∼ 276 K for the TIP4P-Ew and the model developed in this laboratory, respectively. It was detected from the trend of Arrhenius plots of dynamic quantities and from the onset of a further heterogeneity in the rotational relaxation. To our best knowledge, it is the first time that this dynamical crossover is detected in computer simulations of bulk water. On the basis of the simulation results, the possible mechanisms of the two crossovers at molecular level are discussed.
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Affiliation(s)
- Pierfranco Demontis
- Dipartimento di Chimica e Farmacia, Università degli studi di Sassari, Sassari, Italy
| | - Jorge Gulín-González
- Grupo de Matemática y Física Computacionales, Universidad de las Ciencias Informáticas (UCI), Carretera a San Antonio de los Baños, Km 21/2, La Lisa, La Habana, Cuba
| | - Marco Masia
- Dipartimento di Chimica e Farmacia, Università degli studi di Sassari, Sassari, Italy
| | - Marco Sant
- Dipartimento di Chimica e Farmacia, Università degli studi di Sassari, Sassari, Italy
| | - Giuseppe B Suffritti
- Dipartimento di Chimica e Farmacia, Università degli studi di Sassari, Sassari, Italy
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39
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Lehmkühler F, Forov Y, Büning T, Sahle CJ, Steinke I, Julius K, Buslaps T, Tolan M, Hakala M, Sternemann C. Intramolecular structure and energetics in supercooled water down to 255 K. Phys Chem Chem Phys 2016; 18:6925-30. [PMID: 26881494 DOI: 10.1039/c5cp07721d] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
We studied the structure and energetics of supercooled water by means of X-ray Raman and Compton scattering. Under supercooled conditions down to 255 K, the oxygen K-edge measured by X-ray Raman scattering suggests an increase of tetrahedral order similar to the conventional temperature effect observed in non-supercooled water. Compton profile differences indicate contributions beyond the theoretically predicted temperature effect and provide a deeper insight into local structural changes. These contributions suggest a decrease of the electron mean kinetic energy by 3.3 ± 0.7 kJ (mol K)(-1) that cannot be modeled within established water models. Our surprising results emphasize the need for water models that capture in detail the intramolecular structural changes and quantum effects to explain this complex liquid.
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Affiliation(s)
- Felix Lehmkühler
- Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany.
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40
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Nilsson A, Pettersson LGM. The structural origin of anomalous properties of liquid water. Nat Commun 2015; 6:8998. [PMID: 26643439 PMCID: PMC4686860 DOI: 10.1038/ncomms9998] [Citation(s) in RCA: 277] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2015] [Accepted: 10/26/2015] [Indexed: 02/01/2023] Open
Abstract
Water is unique in its number of unusual, often called anomalous, properties. When hot it is a normal simple liquid; however, close to ambient temperatures properties, such as the compressibility, begin to deviate and do so increasingly on further cooling. Clearly, these emerging properties are connected to its ability to form up to four well-defined hydrogen bonds allowing for different local structural arrangements. A wealth of new data from various experiments and simulations has recently become available. When taken together they point to a heterogeneous picture with fluctuations between two classes of local structural environments developing on temperature-dependent length scales.
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Affiliation(s)
- Anders Nilsson
- Department of Physics, AlbaNova University Center, Stockholm University, SE-10691 Stockholm, Sweden
| | - Lars G. M. Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University, SE-10691 Stockholm, Sweden
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41
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Fransson T, Zhovtobriukh I, Coriani S, Wikfeldt KT, Norman P, Pettersson LGM. Requirements of first-principles calculations of X-ray absorption spectra of liquid water. Phys Chem Chem Phys 2015; 18:566-83. [PMID: 26619162 DOI: 10.1039/c5cp03919c] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A computational benchmark study on X-ray absorption spectra of water has been performed by means of transition-potential density functional theory (TP-DFT), damped time-dependent density functional theory (TDDFT), and damped coupled cluster (CC) linear response theory. For liquid water, using TDDFT with a tailored CAM-B3LYP functional and a polarizable embedding, we find that an embedding with over 2000 water molecules is required to fully converge spectral features for individual molecules, but a substantially smaller embedding can be used within averaging schemes. TP-DFT and TDDFT calculations on 100 MD structures demonstrate that TDDFT produces a spectrum with spectral features in good agreement with experiment, while it is more difficult to fully resolve the spectral features in the TP-DFT spectrum. Similar trends were also observed for calculations of bulk ice. In order to further establish the performance of these methods, small water clusters have been considered also at the CC2 and CCSD levels of theory. Issues regarding the basis set requirements for spectrum simulations of liquid water and the determination of gas-phase ionization potentials are also discussed.
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Affiliation(s)
- Thomas Fransson
- Department of Physics, Chemistry and Biology, Linköping University, SE-581 83 Linköping, Sweden
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42
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Prémont-Schwarz M, Schreck S, Iannuzzi M, Nibbering ETJ, Odelius M, Wernet P. Correlating Infrared and X-ray Absorption Energies for Molecular-Level Insight into Hydrogen Bond Making and Breaking in Solution. J Phys Chem B 2015; 119:8115-24. [PMID: 26029818 DOI: 10.1021/acs.jpcb.5b02954] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
While ubiquitous, the making and breaking of hydrogen bonds in solution is notoriously difficult to study due to the associated complex changes of nuclear and electronic structures. With the aim to reduce the according uncertainty in correlating experimental observables and hydrogen-bond configurations, we combine the information from proximate methods to study the N-H···O hydrogen bond in solution. We investigate hydrogen-bonding of the N-H group of N-methylaniline with oxygen from liquid DMSO and acetone with infrared spectra in the N-H stretching region and X-ray absorption spectra at the N K-edge. We experimentally observe blue shifts of the infrared stretching band and an X-ray absorption pre-edge peak when going from DMSO to acetone. With ab initio molecular dynamics simulations and calculated spectra, we qualitatively reproduce the experimental observables but we do not reach quantitative agreement with experiment. The infrared spectra support the notion of weakening the N-H···O hydrogen bond from DMSO to acetone. However, we fail to theoretically reproduce the measured shift of the X-ray absorption pre-edge peak. We discuss possible shortcomings of the simulation models and spectrum calculations. Common features and distinct differences with the O-H···O hydrogen bond are highlighted, and the implications for monitoring hydrogen-bond breaking in solution are discussed.
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Affiliation(s)
- Mirabelle Prémont-Schwarz
- †Max-Born-Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max-Born-Strasse 2 A, 12489 Berlin, Germany
| | - Simon Schreck
- ‡Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.,∥Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Strasse 24-25, 14476 Potsdam, Germany
| | - Marcella Iannuzzi
- §Institute of Physical Chemistry, University of Zurich, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland
| | - Erik T J Nibbering
- †Max-Born-Institut für Nichtlineare Optik und Kurzzeitspektroskopie, Max-Born-Strasse 2 A, 12489 Berlin, Germany
| | - Michael Odelius
- ∥Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Strasse 24-25, 14476 Potsdam, Germany.,#Department of Physics, Stockholm University, AlbaNova University Center, 106 91 Stockholm, Sweden
| | - Philippe Wernet
- ‡Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Strasse 15, 12489 Berlin, Germany
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43
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Zhao L, Ma K, Yang Z. Changes of water hydrogen bond network with different externalities. Int J Mol Sci 2015; 16:8454-89. [PMID: 25884333 PMCID: PMC4425091 DOI: 10.3390/ijms16048454] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Revised: 04/01/2015] [Accepted: 04/08/2015] [Indexed: 11/16/2022] Open
Abstract
It is crucial to uncover the mystery of water cluster and structural motif to have an insight into the abundant anomalies bound to water. In this context, the analysis of influence factors is an alternative way to shed light on the nature of water clusters. Water structure has been tentatively explained within different frameworks of structural models. Based on comprehensive analysis and summary of the studies on the response of water to four externalities (i.e., temperature, pressure, solutes and external fields), the changing trends of water structure and a deduced intrinsic structural motif are put forward in this work. The variations in physicochemical and biological effects of water induced by each externality are also discussed to emphasize the role of water in our daily life. On this basis, the underlying problems that need to be further studied are formulated by pointing out the limitations attached to current study techniques and to outline prominent studies that have come up recently.
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Affiliation(s)
- Lin Zhao
- School of Environmental Science and Engineering, Tianjin University, No. 92 Weijin Road, Tianjin 300072, China.
- School of Chemical Engineering and Technology, Tianjin University, No. 92 Weijin Road, Tianjin 300072, China.
| | - Kai Ma
- School of Environmental Science and Engineering, Tianjin University, No. 92 Weijin Road, Tianjin 300072, China.
| | - Zi Yang
- School of Chemical Engineering and Technology, Tianjin University, No. 92 Weijin Road, Tianjin 300072, China.
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44
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Sellberg JA, McQueen TA, Laksmono H, Schreck S, Beye M, DePonte DP, Kennedy B, Nordlund D, Sierra RG, Schlesinger D, Tokushima T, Zhovtobriukh I, Eckert S, Segtnan VH, Ogasawara H, Kubicek K, Techert S, Bergmann U, Dakovski GL, Schlotter WF, Harada Y, Bogan MJ, Wernet P, Föhlisch A, Pettersson LGM, Nilsson A. X-ray emission spectroscopy of bulk liquid water in “no-man’s land”. J Chem Phys 2015; 142:044505. [DOI: 10.1063/1.4905603] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Affiliation(s)
- Jonas A. Sellberg
- SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory,2575 Sand Hill Road, Menlo Park, California 94025, USA
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | - Trevor A. McQueen
- SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory,2575 Sand Hill Road, Menlo Park, California 94025, USA
- Department of Chemistry, Stanford University, Stanford, California 94305, USA
| | - Hartawan Laksmono
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - Simon Schreck
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Straße 24–25, 14476 Potsdam, Germany
| | - Martin Beye
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489 Berlin, Germany
| | - Daniel P. DePonte
- Center for Free-Electron Laser Science, DESY, Notkestraße 85, 22607 Hamburg, Germany
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | | | - Dennis Nordlund
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, P.O. Box 20450, Stanford, California 94309, USA
| | - Raymond G. Sierra
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - Daniel Schlesinger
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | | | - Iurii Zhovtobriukh
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | - Sebastian Eckert
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489 Berlin, Germany
| | - Vegard H. Segtnan
- SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory,2575 Sand Hill Road, Menlo Park, California 94025, USA
- Nofima AS, N-1430 Ås, Norway
| | - Hirohito Ogasawara
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, P.O. Box 20450, Stanford, California 94309, USA
| | - Katharina Kubicek
- Photon Science, DESY, Notkestraße 85, 22607 Hamburg, Germany
- IFG Structural Dynamics of (Bio)chemical Systems, Max Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37070 Göttingen, Germany
| | - Simone Techert
- IFG Structural Dynamics of (Bio)chemical Systems, Max Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37070 Göttingen, Germany
- Advanced Study Group of the MPG, CFEL, Notkestraße 85, 22853 Hamburg, Germany
| | - Uwe Bergmann
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - Georgi L. Dakovski
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - William F. Schlotter
- Linac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - Yoshihisa Harada
- Institute for Solid State Physics (ISSP), University of Tokyo, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
- Synchrotron Radiation Research Organization, University of Tokyo, Sayo-cho, Sayo, Hyogo 679-5198, Japan
| | - Michael J. Bogan
- PULSE Institute, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - Philippe Wernet
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489 Berlin, Germany
| | - Alexander Föhlisch
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Straße 24–25, 14476 Potsdam, Germany
| | - Lars G. M. Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
| | - Anders Nilsson
- SUNCAT Center for Interface Science and Catalysis, SLAC National Accelerator Laboratory,2575 Sand Hill Road, Menlo Park, California 94025, USA
- Department of Physics, AlbaNova University Center, Stockholm University, S-106 91 Stockholm, Sweden
- Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, P.O. Box 20450, Stanford, California 94309, USA
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