1
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Torres-Boy A, Taccone MI, Kirschbaum C, Ober K, Stein T, Meijer G, von Helden G. Investigation of the Proton-Bound Dimer of Dihydrogen Phosphate and Formate Using Infrared Spectroscopy in Helium Droplets. J Phys Chem A 2024; 128:4456-4466. [PMID: 38771224 PMCID: PMC11163467 DOI: 10.1021/acs.jpca.4c01632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 05/03/2024] [Accepted: 05/06/2024] [Indexed: 05/22/2024]
Abstract
Understanding the structural and dynamic properties of proton-bound complexes is crucial for elucidating fundamental aspects of chemical reactivity and molecular interactions. In this work, the proton-bound complex between dihydrogen phosphate and formate, and its deuterated counterparts, is investigated using IR action spectroscopy in helium droplets. Contrary to the initial expectation that the stronger phosphoric acid would donate a proton to formate, both experiment and theory show that all exchangeable protons are located in the phosphate moiety. The experimental spectra show good agreement with both scaled harmonic and VPT2 anharmonic calculations, indicating that anharmonic effects are small. Some H-bending modes of the nondeuterated complex are found to be sensitive to the helium environment. In the case of the partially deuterated complexes, the experiments indicate that internal dynamics leads to isomeric interconversion upon IR excitation.
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Affiliation(s)
| | - Martín I. Taccone
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Carla Kirschbaum
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
- Institute
of Chemistry and Biochemistry, Freie Universität
Berlin, 14195 Berlin, Germany
| | - Katja Ober
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Tamar Stein
- Institute
of Chemistry and Fritz Haber Center for Molecular Dynamics, Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Gerard Meijer
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
| | - Gert von Helden
- Fritz
Haber Institute of the Max Planck Society, 14195 Berlin, Germany
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2
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Kwan V, Consta S, Malek SMA. Variation of Surface Propensity of Halides with Droplet Size and Temperature: The Planar Interface Limit. J Phys Chem B 2024; 128:193-207. [PMID: 38127582 DOI: 10.1021/acs.jpcb.3c05701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
The radial number density profiles of halide and alkali ions in aqueous clusters with equimolar radius ≲1.4 nm, which correspond to ≲255 H2O molecules, have been extensively studied by computations. However, the surface abundance of Cl-, Br-, and I- relative to the bulk interior in these smaller clusters may not be representative of the larger systems. Indeed, here we show that the larger the cluster is, the lower the relative surface abundance of chaotropic halides is. In droplets with an equimolar radius of ≈2.45 nm, which corresponds to ≈2000 H2O molecules, the polarizable halides show a clear number density maximum in the droplet's bulk-like interior. A similar pattern is observed in simulations of the aqueous planar interface with halide salts at room temperature. At elevated temperature the surface propensity of Cl- decreases gradually, while that of I- is partially preserved. The change in the chaotropic halide location at higher temperatures than the room temperature may considerably affect photochemical reactivity in atmospheric aerosols, vapor-liquid nucleation and growth mechanisms, and salt crystallization via solvent evaporation. We argue that the commonly used approach of nullifying parameters in a force field in order to find the factors that determine the ion location does not provide transferable insight into other force fields.
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Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, ON, Canada N6A 5B7
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, ON, Canada N6A 5B7
| | - Shahrazad M A Malek
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, Canada A1B 3X7
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3
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Zhang J, Pei R, Tan J, Ni Z, Ye S, Luo Y. Visualizing Water Monomers and Chiral OH -(H 2O) Complexes Infiltrated in a Macroscopic Hydrophobic Teflon Matrix. J Am Chem Soc 2023. [PMID: 38048434 DOI: 10.1021/jacs.3c09950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
Abstract
Insights into the interaction of fluoroalkyl groups with water are crucial to understanding the polar hydrophobicity of fluorinated compounds, such as Teflon. While an ordered hydrophobic-like 2D water layer has been demonstrated to be present on the surface of macroscopically hydrophobic fluorinated polymers, little is known about how the water infiltrates into the Teflon and what is the molecular structure of the water infiltrated into the Teflon. Using highly sensitive femtosecond sum frequency generation vibrational spectroscopy (SFG-VS), we observe for the first time that monomeric H2O and chiral OH-(H2O) complexes are present in macroscopically hydrophobic Teflon. The species are inhomogeneously distributed inside the Teflon matrix and at the Teflon surface. No water clusters or single-file water "wires" are observed in the matrix. SFG free induction decay (SFG-FID) experiments demonstrate that the OH oscillators of physically absorbed molecular water at the surface dephase on the time scale of <230 fs, whereas the water monomers and hydrated hydroxide ions infiltrated in the Teflon matrix dephase much more slowly (680-830 fs), indicating that the embedded monomeric H2O and OH-(H2O) complexes are decoupled from the outer environment. Our findings can well interpret ultrafast water permeation through fluorous nanochannels and the charging mechanism of Teflon, which may tailor the desired applications of organofluorines.
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Affiliation(s)
- Jiahui Zhang
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
| | - Ruoqi Pei
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
| | - Junjun Tan
- Hefei National Laboratory, University of Science and Technology of China, Hefei, Anhui 230088, China
| | - Zijian Ni
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
| | - Shuji Ye
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
- Hefei National Laboratory, University of Science and Technology of China, Hefei, Anhui 230088, China
| | - Yi Luo
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230026, China
- Hefei National Laboratory, University of Science and Technology of China, Hefei, Anhui 230088, China
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4
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Olive LN, Dornshuld EV, Schaefer HF, Tschumper GS. Competition between Solvent···Solvent and Solvent···Solute Interactions in the Microhydration of the Tetrafluoroborate Anion, BF 4-(H 2O) n=1,2,3,4. J Phys Chem A 2023; 127:8806-8820. [PMID: 37774368 DOI: 10.1021/acs.jpca.3c04014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/01/2023]
Abstract
This study systematically examines the interactions of the tetrafluoroborate anion (BF4-) with up to four water molecules (BF4-(H2O)n=1,2,3,4). Full geometry optimizations and subsequent harmonic vibrational frequency computations are performed using a variety of density functional theory (DFT) methods (B3LYP, B3LYP-D3BJ, and M06-2X) and the MP2 ab initio method with a triple-ζ correlation consistent basis set augmented with diffuse functions on all non-hydrogen atoms (cc-pVTZ for H and aug-cc-pVTZ for B, O, and F; denoted as haTZ). Optimized structures and harmonic vibrational frequencies were also obtained with the CCSD(T) ab initio method and the haTZ basis set for the mono- and dihydrate (n = 1, 2) structures. The 2-body:Many-body (2b:Mb) technique, in which CCSD(T) computations capture the 1- and 2-body contributions to the interactions and MP2 computations recover all higher-order contributions, was used to extend these demanding computations to the tri- and tetrahydrate (n = 3, 4) systems. Four, five, and eight new stationary points have been identified for the di-, tri-, and tetrahydrate systems, respectively. The global minimum of the monohydrate adopts a symmetric double ionic hydrogen bond motif with C2v symmetry and an electronic dissociation energy of 13.17 kcal mol-1 at the CCSD(T)/haTZ level of theory. This strong solvent···solute interaction, however, competes with solute···solute interactions in the lowest-energy BF4-(H2O)n=2,3,4 minima that are not seen in the other di-, tri-, or tetrahydrate minima. The latter interactions help increase the 2b:Mb dissociation energies to more than 26, 41, and 51 kcal mol-1 for n = 2, 3, and 4, respectively. Structures that form hydrogen bonds between the solvating water molecules also exhibit the largest shifts in the harmonic OH stretching frequencies for the waters of hydration. These shifts can exceed -280 cm-1 relative to an isolated H2O molecule at the 2b:Mb/haTZ level of theory.
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Affiliation(s)
- Laura N Olive
- Center for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Eric V Dornshuld
- Department of Chemistry, Mississippi State University, Mississippi State, Mississippi 39762, United States
| | - Henry F Schaefer
- Center for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
| | - Gregory S Tschumper
- Department of Chemistry and Biochemistry, University of Mississippi, University, Mississippi 38677, United States
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5
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Jiang Y, Hu Z, Zhong C, Yang Y, Wang XB, Sun Z, Sun H, Liu Z, Peng P. Locking water molecules via ternary O-H⋯O intramolecular hydrogen bonds in perhydroxylated closo-dodecaborate. Phys Chem Chem Phys 2023; 25:25810-25817. [PMID: 37724455 DOI: 10.1039/d3cp03555g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/20/2023]
Abstract
A multitude of applications related to perhydroxylated closo-dodecaborate B12(OH)122- in the condensed phase are inseparable from the fundamental mechanisms underlying the high water orientation selectivity based on the base B12(OH)122-. Herein, we directly compare the structural evolution of water clusters, ranging from monomer to hexamer, oriented by functional groups in the bases B12H122-, B12H11OH2- and B12(OH)122- using multiple theoretical methods. A significant revelation is made regarding B12(OH)122-: each additional water molecule is locked into the intramolecular hydrogen bond B-O-H ternary ring in an embedded form. This new pattern of water cluster growth suggests that B-(H-O)⋯H-O interactions prevail over the competition from water-hydrogen bonds (O⋯H-O), distinguishing it from the behavior observed in B12H122- and B12H11OH2- bases, in which competition arises from a mixed competing model involving dihydrogen bonds (B-H⋯H-O), conventional hydrogen bonds (B-(H-O)⋯H-O) and water hydrogen bonds (O⋯H-O). Through aqueous solvation and ab initio molecular dynamics analysis, we further demonstrate the largest water clusters in the first hydrated shell with exceptional thermodynamic stability around B12(OH)122-. These findings provide a solid scientific foundation for the design of boron cluster chemistry incorporating hydroxyl-group-modified borate salts with potential implications for various applications.
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Affiliation(s)
- Yanrong Jiang
- Center for Transformative Science, ShanghaiTech University, Shanghai 201210, China.
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200241, China.
| | - Zhubin Hu
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200241, China.
| | - Cheng Zhong
- College of Chemistry & Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China
| | - Yan Yang
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200241, China.
| | - Xue-Bin Wang
- Physical Sciences Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, Richland, Washington 99352, USA
| | - Zhenrong Sun
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200241, China.
| | - Haitao Sun
- State Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200241, China.
| | - Zhi Liu
- Center for Transformative Science, ShanghaiTech University, Shanghai 201210, China.
| | - Peng Peng
- Center for Transformative Science, ShanghaiTech University, Shanghai 201210, China.
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6
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Cao W, Wen H, Xantheas SS, Wang XB. The primary gas phase hydration shell of hydroxide. SCIENCE ADVANCES 2023; 9:eadf4309. [PMID: 36961895 PMCID: PMC10038337 DOI: 10.1126/sciadv.adf4309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Accepted: 02/22/2023] [Indexed: 06/18/2023]
Abstract
The number of water molecules in hydroxide's primary hydration shell has been long debated to be three from the interpretation of experimental data and four from theoretical studies. Here, we provide direct evidence for the presence of a fourth water molecule in hydroxide's primary hydration shell from a combined study based on high-resolution cryogenic experimental photoelectron spectroscopy and high-level quantum chemical computations. Well-defined spectra of OH-(H2O)n clusters (n = 2 to 5) yield accurate electron binding energies, which are, in turn, used as key signatures of the underlying molecular conformations. Although the smaller OH-(H2O)3 and OH-(H2O)4 clusters adopt close-lying conformations with similar electron binding energies that are hard to distinguish, the OH-(H2O)5 cluster clearly has a predominant conformation with a four-coordinated hydroxide binding motif, a finding that unambiguously determines the gas phase coordination number of hydroxide to be four.
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Affiliation(s)
- Wenjin Cao
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA
| | - Hui Wen
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA
- Laboratory of Atmospheric Physico-Chemistry, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, China
| | - Sotiris S. Xantheas
- Advanced Computing, Mathematics and Data Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA
- Department of Chemistry, University of Washington, Seattle, WA 98195, USA
| | - Xue-Bin Wang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA
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7
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Molina FL, Jara-Toro RA, Noble JA, Dedonder-Lardeux C, Jouvet C, Pino GA. Photodetachment of Deprotonated R-Mandelic Acid: The Role of Proton Delocalization on the Radical Stability. Chemphyschem 2023; 24:e202200324. [PMID: 36000956 DOI: 10.1002/cphc.202200324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Revised: 08/23/2022] [Indexed: 01/05/2023]
Abstract
The photodetachment and stability of R-Mandelate, the deprotonated form of the R-Mandelic acid, was investigated by observing the neutral species issued from either simple photodetachment or dissociative photodetachment in a cold anions set-up. R-Mandalate has the possibility to form an intramolecular ionic hydrogen-bond between adjacent hydroxyl and carboxylate groups. The potential energy surface along the proton transfer (PT) coordinate between both groups (O- …H+ …- OCO) features a single local minima, with the proton localized on the O- group (OH…- OCO). However, the structure with the proton localized on the - OCO group (O- …HOCO) is also observed because it falls within the extremity of the vibrational wavefunction of the OH…- OCO isomer along the PT coordinate. The stability of the corresponding radicals, produced upon photodetachment, is strongly dependent on the position of the proton in the anion: the radicals produced from the OH…- OCO isomer decarboxylate without barrier, while the radicals produced from the O- …HOCO isomer are stable.
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Affiliation(s)
- Franco L Molina
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
| | - Rafael A Jara-Toro
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
| | - Jennifer A Noble
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Claude Dedonder-Lardeux
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Christophe Jouvet
- Physique des Interactions Ioniques et Moléculaires (PIIM), CNRS, Aix-Marseille Université, 13397, Marseille, France
| | - Gustavo A Pino
- INFIQC: Instituto de Investigaciones en Fisicoquímica de Córdoba (CONICET - UNC) -, Haya de la Torre s/n, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba -, Haya de la Torre y Medina Allende, Ciudad Universitaria, X5000HUA, Córdoba, Argentina.,Centro Láser de Ciencias Moleculares -, Universidad Nacional de Córdoba, Haya de la Torre s/n, Pabellón Argentina, Ciudad Universitaria, X5000HUA, Córdoba, Argentina
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8
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Zane AR, Curotto E. Electrolyte clusters as hydrogen sponges: diffusion Monte Carlo simulations. Phys Chem Chem Phys 2022; 24:26094-26101. [PMID: 36268906 DOI: 10.1039/d2cp03658d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
We carry out Diffusion Monte Carlo simulations of up to five hydrogen molecules aggregated with two Stockmayer clusters that solvate a single lithium ion. The first one contains six point dipole solvent particles with parameters tuned to emulate nitromethane. The second cluster is a relative large system investigated recently [G. DiEmma, S. Kalette, and E. Curotto, Chem. Phys. Lett. 2019, 725, 80-86]. In both cases we find that the aggregated hydrogen molecules perturb significantly the ground state of the host cluster and form a distorted tetrahedral cage around the Li+ ion. The fifth hydrogen molecule is absorbed by the larger Stockmayer cluster while remaining in the proximity of the solvated charge.
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Affiliation(s)
- A R Zane
- Department of Chemistry & Physics Arcadia University, 450 S. Easton Rd., Glenside, PA 19038, USA.
| | - E Curotto
- Department of Chemistry & Physics Arcadia University, 450 S. Easton Rd., Glenside, PA 19038, USA.
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9
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Kuznetsov DB, Mironov AY, Neschislyaev VA, Volkhin IL, Orlova EV, Shilina AD. Restoration of the Indicator Properties of Whole-cell Luminescent Biosensors. Appl Biochem Biotechnol 2022; 194:4081-4092. [PMID: 35612718 DOI: 10.1007/s12010-022-03977-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/16/2022] [Indexed: 11/27/2022]
Abstract
Whole-cell biosensors are widely used to produce medical diagnostic tests, but in the long term, they tend to lose their indicator properties. Consequently, it is crucial to find ways to restore these properties and prolong the shelf life of the tests. Here, we propose to use electromagnetic radiation with optimally selected parameters of frequency, power, and exposure time. The impact of radiation parameters on biosensor luminescence was studied as well as the effects of different types of radiation coming from laser sources (λ = 875 nm), a LED source (λ = 850 ÷ 890 nm), and microwave units (at frequencies 42.22, 53.53, 61.18 и 34 ÷ 38 GHz). IR treatment resulted in dose-dependent suppression of biosensor luminescence. The luminescence level when exposed to microwave radiation depends on the radiation time and frequency. Also, it has been found that optimal selection of the main radiation parameters enables to restore indicator properties partially lost by biosensors during storage. We explain the mechanism responsible for the sensitizing effect of radiation, which implies the polarization of solvent dipoles and changes in mobility of acceptor molecules. This, in turn, leads to a shift in the chemical equilibrium states and triggers a cascade of biochemical reactions that lead to restoration of the lost indicator properties of biosensors. The study of antagonistic activity has revealed that restored biosensors provide reliable test results after the expiration of their warranty period.
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Affiliation(s)
- D B Kuznetsov
- Perm State Pharmaceutical Academy, Perm, 614000, Russian Federation. .,G. N. Gabrichevsky Moscow Research Institute for Epidemiology and Microbiology, Moscow, 125212, Russian Federation.
| | - A Yu Mironov
- G. N. Gabrichevsky Moscow Research Institute for Epidemiology and Microbiology, Moscow, 125212, Russian Federation
| | - V A Neschislyaev
- Perm State Pharmaceutical Academy, Perm, 614000, Russian Federation
| | - I L Volkhin
- Perm State University, 614000, Perm, Russian Federation
| | - E V Orlova
- Perm State Pharmaceutical Academy, Perm, 614000, Russian Federation
| | - A D Shilina
- Perm State Pharmaceutical Academy, Perm, 614000, Russian Federation
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10
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Thomas DA, Taccone M, Ober K, Mucha E, Meijer G, von Helden G. Helium Nanodroplet Infrared Action Spectroscopy of the Proton-Bound Dimer of Hydrogen Sulfate and Formate: Examining Nuclear Quantum Effects. J Phys Chem A 2021; 125:9279-9287. [PMID: 34652165 PMCID: PMC8558860 DOI: 10.1021/acs.jpca.1c05705] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The proton-bound dimer of hydrogen sulfate and formate is an archetypal structure for ionic hydrogen-bonding complexes that contribute to biogenic aerosol nucleation. Of central importance for the structure and properties of this complex is the location of the bridging proton connecting the two conjugate base moieties. The potential energy surface for bridging proton translocation features two local minima, with the proton localized at either the formate or hydrogen sulfate moiety. However, electronic structure methods reveal a shallow potential energy surface governing proton translocation, with a barrier on the order of the zero-point energy. This shallow potential complicates structural assignment and necessitates a consideration of nuclear quantum effects. In this work, we probe the structure of this complex and its isotopologues, utilizing infrared (IR) action spectroscopy of ions captured in helium nanodroplets. The IR spectra indicate a structure in which a proton is shared between the hydrogen sulfate and formate moieties, HSO4-···H+···-OOCH. However, because of the nuclear quantum effects and vibrational anharmonicities associated with the shallow potential for proton translocation, the extent of proton displacement from the formate moiety remains unclear, requiring further experiments or more advanced theoretical treatments for additional insight.
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Affiliation(s)
- Daniel A Thomas
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Martín Taccone
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Katja Ober
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Eike Mucha
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Gerard Meijer
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Gert von Helden
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
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11
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Lemke KH. Structure and solvation dynamics of the hydroxide ion in ice-like water clusters: a CCSD(T) and car-parrinello molecular dynamics study. Phys Chem Chem Phys 2021; 23:18990-18998. [PMID: 34612437 DOI: 10.1039/d1cp02524d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Using MP2, CCSD(T) electronic structure theory and ab initio molecular dynamics simulations, we explore the structure, solvation dynamics and vibrational spectra of OH-(H2O)n clusters. Our study reports new cubic and fused cubic global minima structures of OH-(H2O)n for n = 8-26 with surface and interior solvation arrangements. In the case of OH-(H2O)26, we show that MP2 and CCSD(T) calculations predict global minima structures with the hydroxide ion occupying the interior region of a densely packed cubic cluster that is secured by ionic hydrogen bonds. More importantly, results from ab initio molecular dynamics simulations of OH-(H2O)26 demonstrate that the hydroxide ion remains in the cluster interior and hexa-coordinated, irrespective of the temperature, up to around 175 K, then incrementally transitions from a surface-exposed penta- (170-200 K), to a tetra- (225 K) to a tri-coordinated OH-(H2O)3 structure at 300 K. Building on our temperature-dependent vibrational power spectra, we are also able to disentangle structure and temperature effects on individual spectral contributions arising from water molecules located in the inner and outer shell of OH-(H2O)26. Some of these theoretical results provide valuable guidance for the interpretation of IRMPD spectra of small hydroxide-water clusters, but there are also several intriguing implications of these results, in particular, for the solvation of the OH- ion at the surface of water nanodroplets and aqueous interfaces.
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Affiliation(s)
- Kono H Lemke
- Department of Earth Sciences, University of Hong Kong, Pokfulam Road, Hong Kong, SAR.
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12
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Malek SMA, Kwan V, Saika-Voivod I, Consta S. Low Density Interior in Supercooled Aqueous Nanodroplets Expels Ions to the Subsurface. J Am Chem Soc 2021; 143:13113-13123. [PMID: 34375522 DOI: 10.1021/jacs.1c04142] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The interaction between water and ions within droplets plays a key role in the chemical reactivity of atmospheric and man-made aerosols. Here we report direct computational evidence that in supercooled aqueous nanodroplets a lower density core of tetrahedrally coordinated water expels the cosmotropic ions to the denser and more disordered subsurface. In contrast, at room temperature, depending on the nature of the ion, the radial distribution in the droplet core is nearly uniform or elevated toward the center. We analyze the spatial distribution of a single ion in terms of a reference electrostatic model. The energy of the system in the analytical model is expressed as the sum of the electrostatic and surface energy of a deformable droplet. The model predicts that the ion is subject to a harmonic potential centered at the droplet's center of mass. We name this effect "electrostatic confinement". The model's predictions are consistent with the simulation findings for a single ion at room temperature but not at supercooling. We anticipate this study to be the starting point for investigating the structure of supercooled (electro)sprayed droplets that are used to preserve the conformations of macromolecules originating from the bulk solution.
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Affiliation(s)
- Shahrazad M A Malek
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's A1B 3X7, Canada
| | - Victor Kwan
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Ivan Saika-Voivod
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's A1B 3X7, Canada.,Department of Applied Mathematics, Western University, London, Ontario N6A 3K7, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
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13
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Zeng HJ, Johnson MA. Demystifying the Diffuse Vibrational Spectrum of Aqueous Protons Through Cold Cluster Spectroscopy. Annu Rev Phys Chem 2021; 72:667-691. [PMID: 33646816 DOI: 10.1146/annurev-physchem-061020-053456] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The ease with which the pH is routinely determined for aqueous solutions masks the fact that the cationic product of Arrhenius acid dissolution, the hydrated proton, or H+(aq), is a remarkably complex species. Here, we review how results obtained over the past 30 years in the study of H+⋅(H2O)n cluster ions isolated in the gas phase shed light on the chemical nature of H+(aq). This effort has also revealed molecular-level aspects of the Grotthuss relay mechanism for positive-charge translocation in water. Recently developed methods involving cryogenic cooling in radiofrequency ion traps and the application of two-color, infrared-infrared (IR-IR) double-resonance spectroscopy have established a clear picture of how local hydrogen-bond topology drives the diverse spectral signatures of the excess proton. This information now enables a new generation of cluster studies designed to unravel the microscopic mechanics underlying the ultrafast relaxation dynamics displayed by H+(aq).
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Affiliation(s)
- Helen J Zeng
- Sterling Chemistry Laboratory, Yale University, New Haven, Connecticut 06520, USA;
| | - Mark A Johnson
- Sterling Chemistry Laboratory, Yale University, New Haven, Connecticut 06520, USA;
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14
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Cao W, Xantheas SS, Wang XB. Cryogenic Vibrationally Resolved Photoelectron Spectroscopy of OH -(H 2O): Confirmation of Multidimensional Franck-Condon Simulation Results for the Transition State of the OH + H 2O Reaction. J Phys Chem A 2021; 125:2154-2162. [PMID: 33661632 DOI: 10.1021/acs.jpca.1c00848] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present a transition state spectroscopic study of the OH + H2O reaction using the experimental technique of cryogenic negative ion photoelectron spectroscopy (NIPES). The recorded NIPE spectrum at 193 nm exhibits multiple vibrational progressions that include excitations to the shared H atom antisymmetric stretching mode with an interval of 0.32 eV as well as other progressions, mainly involving the H bending and O···O symmetric stretching modes. The vertical detachment energy (VDE) was measured at 3.53 eV, whereas an upper limit for the adiabatic detachment energy (ADE) was estimated at 2.90 eV. These values are in excellent agreement with the theoretically computed values of 3.51 and 2.87 eV, respectively, obtained at the CCSD(T)/aug-cc-pV5Z level of theory. The recorded NIPE spectrum is in very good agreement when compared to the one recently reported from four-dimensional Franck-Condon simulations, in which a similar spectral profile was predicted. Besides observing the ground state, we identified a charge-transfer excited state in the form of [OH-(H2O)+] with a relative energy of 1.39 eV, well matching the previous prediction of 1.36 eV.
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Affiliation(s)
- Wenjin Cao
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Sotiris S Xantheas
- Advanced Computing, Mathematics and Data Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States.,Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Xue-Bin Wang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
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15
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Alminshid AH, Abbas MN, Alalwan HA, Sultan AJ, Kadhom MA. Aldol condensation reaction of acetone on MgO nanoparticles surface: An in-situ drift investigation. MOLECULAR CATALYSIS 2021. [DOI: 10.1016/j.mcat.2020.111333] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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16
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Abdo YA, Tschumper GS. Competition between Solvent-Solvent and Solvent-Solute Interactions in the Microhydration of the Hexafluorophosphate Anion, PF 6-(H 2O) n=1,2. J Phys Chem A 2020; 124:8744-8752. [PMID: 32993285 DOI: 10.1021/acs.jpca.0c06466] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
This study systematically examines the interactions of the hexafluorophosphate anion (PF6-) with one or two solvent water molecules (PF6-(H2O)n where n = 1, 2). Full geometry optimizations and subsequent harmonic vibrational frequency computations are performed on each stationary point using a variety of common density functional theory methods (B3LYP, B3LYP-D3, M06-2X, and ωB97XD) and the MP2 and CCSD(T) ab initio methods with a triple-ζ correlation consistent basis set augmented with diffuse functions on all non-hydrogen atoms (cc-pVTZ for H and aug-cc-pVTZ for P, O, and F; denoted as haTZ). Five new stationary points of PF6-(H2O)2 have been identified, one of which has an electronic energy of approximately 2 kcal mol-1 lower than the only other dihydrate structure reported for this system. The CCSD(T) computations also reveal that the detailed interactions between PF6- and H2O can be quite difficult to model reliably, with some methods struggling to correctly characterize stationary points for n = 1 or accurately reproduce the vibrational frequency shifts induced by the formation of the hydrated complex. Although the interactions between the solvent and ionic solute are quite strong (CCSD(T) electronic dissociation energy ≈10 kcal mol-1 for the monohydrate minimum), the solvent-solvent interactions in the lowest-energy PF6-(H2O)2 minimum give rise to appreciable cooperative effects not observed in the other dihydrate minima. In addition, this newly identified structure exhibits the largest frequency shifts in the OH stretching vibrations for the waters of hydration (with Δω exceeding -100 cm-1 relative to the values for an isolated H2O molecule).
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Affiliation(s)
- Yasmeen A Abdo
- Department of Chemistry and Biochemistry, University of Mississippi, University, Mississippi 38677-1848, United States
| | - Gregory S Tschumper
- Department of Chemistry and Biochemistry, University of Mississippi, University, Mississippi 38677-1848, United States
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17
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Shi H, Gong LD, Liu C, Lu LN, Yang ZZ. ABEEM/MM OH - Models for OH -(H 2O) n Clusters and Aqueous OH -: Structures, Charge Distributions, and Binding Energies. J Phys Chem A 2020; 124:5963-5978. [PMID: 32520555 DOI: 10.1021/acs.jpca.0c03941] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Based on the atom-bond electronegativity equalization method fused into molecular mechanics (ABEEM/MM), two fluctuating charge models of OH--water system were proposed. The difference between these two models is whether there is charge transfer between OH- and its first-shell water molecules. The structures, charge distributions, charge transfer, and binding energies of the OH-(H2O)n (n = 1-8, 10, 15, 23) clusters were studied by these two ABEEM/MM models, the OPLS/AA force field, the OPLS-SMOOTH/AA force field, and the QM methods. The results demonstrate that two ABEEM/MM models can search out all stable structures just as the QM methods, and the structures and charge distributions agree well with those from the QM calculations. The structures, the charge transfer, and the strength of hydrogen bonds in the first hydration shell are closely related to the coordination number of OH-. Molecular dynamics simulations on the aqueous OH- solution are performed at 298 and 278 K using ABEEM/MM-I model. The MD results show that the populations of three-, four-, and five-coordinated OH- are 29.6%, 67.1%, and 3.4% at 298 K, respectively, and those of two-, three-, four-, and five-coordinated OH- are 10.8%, 44.9%, 39.2%, and 4.9% at 278 K, respectively; the average hydrogen bond lengths and the hydrogen bond angle in the first shell increase with the temperature decreasing.
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Affiliation(s)
- Hua Shi
- School of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, 116029, People's Republic of China.,School of Marine Science and Environment, Dalian Ocean University, Dalian 116023, People's Republic of China
| | - Li-Dong Gong
- School of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, 116029, People's Republic of China
| | - Cui Liu
- School of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, 116029, People's Republic of China
| | - Li-Nan Lu
- School of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, 116029, People's Republic of China
| | - Zhong-Zhi Yang
- School of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, 116029, People's Republic of China
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18
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Kwan V, Malevanets A, Consta S. Where Do the Ions Reside in a Highly Charged Droplet? J Phys Chem A 2019; 123:9298-9310. [DOI: 10.1021/acs.jpca.9b03368] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Victor Kwan
- Department of Chemistry, The University of Western Ontario, London N6A 5B7, Ontario, Canada
| | - Anatoly Malevanets
- Department of Electrical and Computer Engineering, The University of Western Ontario, London N6A 5B9, Ontario, Canada
| | - Styliani Consta
- Department of Chemistry, The University of Western Ontario, London N6A 5B7, Ontario, Canada
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19
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Calvo F. Conformational diversity in deprotonated water clusters and anharmonic infrared spectra. MOLECULAR SIMULATION 2019. [DOI: 10.1080/08927022.2018.1513653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- F. Calvo
- Université Grenoble Alpes, CNRS, LIPhy, Grenoble, France
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20
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21
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Menges FS, Zeng HJ, Kelleher PJ, Gorlova O, Johnson MA, Niemann T, Strate A, Ludwig R. Structural Motifs in Cold Ternary Ion Complexes of Hydroxyl-Functionalized Ionic Liquids: Isolating the Role of Cation-Cation Interactions. J Phys Chem Lett 2018; 9:2979-2984. [PMID: 29750531 DOI: 10.1021/acs.jpclett.8b01130] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
We address the competition between intermolecular forces underlying the recent observation that ionic liquids (ILs) with a hydroxyl-functionalized cation can form domains with attractive interactions between the nominally repulsive positively charged constituents. Here we show that this behavior is present even in the isolated ternary (HEMIm+)2NTf2- complex (HEMIm+ = 1-(2-hydroxyethyl)-3-methylimidazolium) cooled to about 35 K in a photodissociation mass spectrometer. Of the three isomers isolated by double resonance techniques, one is identified to exhibit direct contact between the cations. This linkage involves a cooperative H-bond wherein the OH group on one cation binds to the OH group on the other, which then attaches to the basic N atom of the anion. Formation of this motif comes at the expense of the usually dominant interaction of the acidic C(2)H group on the Im ring with molecular anions, as evidenced by isomer-dependent shifts in the C(2)H vibrational fundamentals.
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Affiliation(s)
- Fabian S Menges
- Sterling Chemistry Laboratory , Yale University , New Haven , Connecticut 06520 , United States
| | - Helen J Zeng
- Sterling Chemistry Laboratory , Yale University , New Haven , Connecticut 06520 , United States
| | - Patrick J Kelleher
- Sterling Chemistry Laboratory , Yale University , New Haven , Connecticut 06520 , United States
| | - Olga Gorlova
- Sterling Chemistry Laboratory , Yale University , New Haven , Connecticut 06520 , United States
| | - Mark A Johnson
- Sterling Chemistry Laboratory , Yale University , New Haven , Connecticut 06520 , United States
| | - Thomas Niemann
- Department of Chemistry , University of Rostock , 18059 Rostock , Germany
- Leibniz-Institut für Katalyse e.V. , Albert-Einstein-Strasse 29a , 18059 Rostock , Germany
| | - Anne Strate
- Department of Chemistry , University of Rostock , 18059 Rostock , Germany
- Leibniz-Institut für Katalyse e.V. , Albert-Einstein-Strasse 29a , 18059 Rostock , Germany
| | - Ralf Ludwig
- Department of Chemistry , University of Rostock , 18059 Rostock , Germany
- Leibniz-Institut für Katalyse e.V. , Albert-Einstein-Strasse 29a , 18059 Rostock , Germany
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22
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Consta S, Oh MI, Sharawy M, Malevanets A. Macroion–Solvent Interactions in Charged Droplets. J Phys Chem A 2018; 122:5239-5250. [DOI: 10.1021/acs.jpca.8b01404] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Styliani Consta
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Myong In Oh
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Mahmoud Sharawy
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Anatoly Malevanets
- Department of Electrical and Computer Engineering, The University of University of Western Ontario, London, Ontario, Canada N6A 5B9
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23
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Egan CK, Paesani F. Assessing Many-Body Effects of Water Self-Ions. I: OH–(H2O)n Clusters. J Chem Theory Comput 2018. [DOI: 10.1021/acs.jctc.7b01273] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Colin K. Egan
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
| | - Francesco Paesani
- Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States
- Materials Science and Engineering, University of California San Diego, La Jolla, California 92093, United States
- San Diego Supercomputer Center, University of California San Diego, La Jolla, California 92093, United States
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24
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Lengyel J, Ončák M, Herburger A, van der Linde C, Beyer MK. Infrared spectroscopy of O˙ - and OH - in water clusters: evidence for fast interconversion between O˙ - and OH˙OH . Phys Chem Chem Phys 2017; 19:25346-25351. [PMID: 28891582 PMCID: PMC7100789 DOI: 10.1039/c7cp04577h] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
We present infrared multiple photon dissociation (IRMPD) spectra of (H2O)nO˙- and (H2O)nOH- cluster ensembles for n[combining macron] ≈ 8 and 47 in the range of 2400-4000 cm-1. Both hydrated ions exhibit the same spectral features, in good agreement with theoretical calculations. Decomposition of the calculated spectra shows that bands originating from H2OO˙- and H2OOH- interactions span almost the whole spectral region of interest. Experimentally, evaporation of OH˙ is observed to a small extent, which requires interconversion of (H2O)nO˙- into (H2O)n-1OH˙OH-, with subsequent H2O evaporation preferred over OH˙ evaporation. The modeling shows that (H2O)nO˙- and (H2O)n-1OH˙OH- cannot be distinguished by IRMPD spectroscopy.
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Affiliation(s)
- Jozef Lengyel
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstraße 25, 6020 Innsbruck, Austria.
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25
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Duong CH, Gorlova O, Yang N, Kelleher PJ, Johnson MA, McCoy AB, Yu Q, Bowman JM. Disentangling the Complex Vibrational Spectrum of the Protonated Water Trimer, H +(H 2O) 3, with Two-Color IR-IR Photodissociation of the Bare Ion and Anharmonic VSCF/VCI Theory. J Phys Chem Lett 2017; 8:3782-3789. [PMID: 28737922 DOI: 10.1021/acs.jpclett.7b01599] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Vibrational spectroscopy of the protonated water trimer provides a stringent constraint on the details of the potential energy surface (PES) and vibrational dynamics governing excess proton motion far from equilibrium. Here we report the linear spectrum of the cold, bare H+(H2O)3 ion using a two-color, IR-IR photofragmentation technique and follow the evolution of the bands with increasing ion trap temperature. The key low-energy features are insensitive to both D2 tagging and internal energy. The D2-tagged D+(D2O)3 spectrum is reported for the first time, and the isotope dependence of the band pattern is surprisingly complex. These spectra are reproduced by large-scale vibrational configuration interaction calculations based on a new full-dimensional PES, which treat the anharmonic effects arising from large amplitude motion. The results indicate such extensive mode mixing in both isotopologues that one should be cautious about assigning even the strongest features to particular motions, especially for the absorptions that occur close to the intramolecular bending mode of the water molecule.
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Affiliation(s)
- Chinh H Duong
- Sterling Chemistry Laboratory, Yale University , New Haven, Connecticut 06520, United States
| | - Olga Gorlova
- Sterling Chemistry Laboratory, Yale University , New Haven, Connecticut 06520, United States
| | - Nan Yang
- Sterling Chemistry Laboratory, Yale University , New Haven, Connecticut 06520, United States
| | - Patrick J Kelleher
- Sterling Chemistry Laboratory, Yale University , New Haven, Connecticut 06520, United States
| | - Mark A Johnson
- Sterling Chemistry Laboratory, Yale University , New Haven, Connecticut 06520, United States
| | - Anne B McCoy
- Department of Chemistry, University of Washington , Seattle, Washington 98195, United States
| | - Qi Yu
- Department of Chemistry and Cherry L. Emerson Center for Computational Science, Emory University , Atlanta, Georgia 30322, United States
| | - Joel M Bowman
- Department of Chemistry and Cherry L. Emerson Center for Computational Science, Emory University , Atlanta, Georgia 30322, United States
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